Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0003501

Physical Location & Seq

Genomic Coordinates Forward (+)

7151666 .. 7154362

Gene Structure 2697 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1087400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1755 bp

ATGGCATCTGCTATTCCTTTTTCACCAACATTTCTAGTGGCTTTTCTTCTTGCTCTTATCTCTCTCTTGGCCTTTCCTGAGTTTGCCATTGCTGCAGCTGGCAGTGTTACAAGGCTTTACAAATTCGATATAAAGTTGAAAAATGTGACTAGGCTGTGCACCACAAAGAGCATTGTGACAGTGAATGGCAAGTTCCCTGGACCTAGAATTATTGCCAGAGAAGGAGACAGGGTTTTGGTTAAAGTGGTCAATCATGTTCCAAACAACATGACCATCCATTGGCATGGCATCAGACAATTGCAGAGTGGATGGGCAGATGGGCCATCATATGTCACTCAGTGCCCTATTCAAACAAACCAGAGTTATGTGTACAATTTCACCATCATTGGCCAAAGGGGAACTCTCTTCTGGCATGCTCACATCTCATGGCTAAGAGCTACTGTCTATGGACCCCTCATCATCCTCCCTAAGCGCCATGCTCCCTACCCTTTTCCCAAACCCCACAAAGAAGTTCCCATAATTTTTGGTGAGTGGTGGAATGTTGACACGGAGGCTGTAATTAGCCAGGCTCTACAGACCGGAGGTGGTCCAAATGTCTCCAATGCCTATACGATTAACGGACTTCCAGGGCCATTGTACAACTGTTCCAAAAAGGACACTTTCAGTCTAAAGGTGAAGCCTGGAAAGACATACCTCTTGCGATTGATCAACGCTGCAGTCAATGATGAACTGTTTTTCAGCATAGCAAACCACAGCCTAACAGTAGTTGAAGCAGATGCTGTGTATGTCAAACCCTTCAAGACCAATATTTTACTCATTACACCAGGGCAAACCACAAACGTGCTTCTCAAGGCAAAACCTCACTACCCTAATGCCACTTTCCTCATGTTAGCCAGACCCTACTTTACAGGCATGGGTACTTTTGACAATTCAACTGTTGCTGGAATTCTTGAGTACAAAGAACACTCAAATTCTTCTTCCTCCACATCACTGAAAAGCCCACTTTTTAGGCCAATCCTTCCCCAAATCAATGCTACTTCTTTTGTTGCAAATTTTACTAGTAAATTCAGGAGTTTGGCCAATTCTAAATTTCCAGCCAATGTGCCCAGAACTGTCGAAAAACGCTTCTTTTTCACAGTAGGGCTTGGAACCAACCCATGTCCTAAAAACCAAACATGCCAAGGGCCTACCAACACCACAAAATTTGCAGCTTCTATTAACAACAACTCATTTGTTCTTCCTTCAGTAGCACTGCTTCAATCTCATTTCTTTGCTCAATCCAACAGTATTTACACCACCGATTTCCCTACTATTCCTCCCAAGCTGTTCAATTATACAGGCACTCCACCTAACAACACCAATGTGAGTAATGGGACAAAGGTGGTGGTGTTGAAGTTCAATACTAGTGTGGAATTGGTGTTGCAGGGCACCAGCATTTTGGGTGCTGAGAGCCACCCTCTTCACCTTCATGGCTTCAACTTCTTTGTTGTTGGACAAGGTTTTGGAAACTTTGACCCTAACAAAGACCCGCCTAACTTCAACCTTGTGGATCCTGTTGAAAGGAACACCTTCGGAGTACCCTCCAGGGGTTGGGTGGCTATCCGATTTCTTGCAGACAACCCAGGCGTTTGGCTCATGCATTGCCACTTTGATATCCATTTAAGCTGGGGGCTGAGGATGGCTTGGGTAGTCCAAGATGGGAAGCTACCTAATCAGAAGCTGCCTCCTCCACCGTCCGATCTCCCAAAGTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0006950 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009628 GO:0010035 GO:0016491 GO:0016722 GO:0042221 GO:0050896 GO:0055114 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

585

Amino Acids

64.57

Weight (kDa)

9.68

Isoelectric Point (pI)

30.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	45 - 157	2.5e-41	Multicopper oxidase
Cu-oxidase	PF00394	170 - 321	6.7e-44	Multicopper oxidase
Cu-oxidase_2	PF07731	435 - 567	2.4e-42	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003501)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G29130
fragaria_vesca	FvH4_6g13430
malus_domestica	MD03G1087400.v1.1 MD04G1131200.v1.1 MD11G1096500.v1.1 MD12G1144300.v1.1
prunus_persica	Prupe.6G072100_v2.0.a1 Prupe.6G257700_v2.0.a1
pyrus_communis	pycom03g06930 pycom04g11940 pycom11g08180 pycom12g13880
rosa_chinensis	RchiOBHm_Chr3g0466301 RchiOBHm_Chr3g0466311 RchiOBHm_Chr5g0065931
rosa_laevigata	RLG00000024588 RLG00000035828
rosa_multiflora	Rmu_co8069514.1_g000001 Rmu_co8514891.1_g000001 Rmu_sc0000350.1_g000021 Rmu_sc0003480.1_g000018 Rmu_sc0005869.1_g000003
rosa_roxburghii	Rroxscaffold_1G00015240 Rroxscaffold_6G00414620
rosa_rugosa	Rorug03G0080800 Rorug05G0375600
rosa_samantha	Rh3AG127200 Rh3BG148500 Rh3DG149200 Rh5AG433600 Rh5BG450200 Rh5CG472500 Rh5DG463600
rosa_wichuraiana	Rw3G012010 Rw5G040650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1427
AccB7I	CCANNNNNTGG	2 cut(s)	279, 1590
AciI	CCGC	1 cut(s)	1529
AclWI	GGATC	2 cut(s)	1544, 1557
AcoI	YGGCCR	2 cut(s)	388, 1077
AcsI	RAATTY	7 cut(s)	122, 945, 970, 1051, 1064, 1088, 1202
AcuI	CTGAAG	1 cut(s)	1227
AdeI	CACNNNGTG	1 cut(s)	339
AfaI	GTAC	5 cut(s)	371, 638, 919, 956, 1578
AfiI	CCNNNNNNNGG	3 cut(s)	279, 1586, 1590
AhlI	ACTAGT	2 cut(s)	1058, 1403
AjnI	CCWGG	7 cut(s)	196, 564, 625, 679, 823, 1583, 1621
AleI	CACNNNNGTG	2 cut(s)	839, 1361
AluBI	AGCT	7 cut(s)	98, 437, 1211, 1324, 1665, 1705, 1720
AluI	AGCT	7 cut(s)	98, 437, 1211, 1324, 1665, 1705, 1720
Alw21I	GWGCWC	1 cut(s)	161
Alw26I	GTCTC	2 cut(s)	219, 601
Alw44I	GTGCAC	1 cut(s)	157
AlwI	GGATC	2 cut(s)	1544, 1557
AlwNI	CAGNNNCTG	2 cut(s)	779, 1720
AoxI	GGCC	7 cut(s)	69, 320, 388, 629, 1010, 1077, 1184
ApaLI	GTGCAC	1 cut(s)	157
ApeKI	GCWGC	5 cut(s)	92, 95, 713, 1208, 1720
ApoI	RAATTY	7 cut(s)	122, 945, 970, 1051, 1064, 1088, 1202
Asp700I	GAANNNNTTC	1 cut(s)	1568
AspLEI	GCGC	1 cut(s)	474
AspS9I	GGNCC	6 cut(s)	200, 320, 449, 587, 629, 1184
AsuHPI	GGTGA	5 cut(s)	15, 370, 539, 685, 1454
AvaII	GGWCC	3 cut(s)	200, 449, 587
BaeGI	GKGCMC	4 cut(s)	161, 344, 1107, 1430
BalI	TGGCCA	2 cut(s)	390, 1079
BamHI	GGATCC	1 cut(s)	1549
BanI	GGYRCC	1 cut(s)	1427
BarI	GAAGNNNNNNTAC	2 cut(s)	1239, 1271
Bbv12I	GWGCWC	1 cut(s)	161
BbvCI	CCTCAGC	1 cut(s)	1673
BbvI	GCAGC	5 cut(s)	79, 107, 700, 1220, 1707
BccI	CCATC	7 cut(s)	281, 303, 311, 331, 389, 1672, 1691
BciT130I	CCWGG	7 cut(s)	198, 566, 627, 681, 825, 1585, 1623
BclI	TGATCA	1 cut(s)	705
BcoDI	GTCTC	2 cut(s)	219, 601
BcuI	ACTAGT	2 cut(s)	1058, 1403
BfaI	CTAG	5 cut(s)	35, 150, 204, 1059, 1404
BfmI	CTRYAG	3 cut(s)	93, 572, 714
BfoI	RGCGCY	1 cut(s)	475
BisI	GCNGC	5 cut(s)	93, 96, 714, 1209, 1721
BlsI	GCNGC	5 cut(s)	94, 97, 715, 1210, 1722
Bme1390I	CCNGG	7 cut(s)	198, 566, 627, 681, 825, 1585, 1623
Bme18I	GGWCC	3 cut(s)	200, 449, 587
BmgT120I	GGNCC	6 cut(s)	200, 320, 449, 587, 629, 1184
BmiI	GGNNCC	4 cut(s)	451, 1150, 1429, 1551
BmrFI	CCNGG	7 cut(s)	198, 566, 627, 681, 825, 1585, 1623
BmsI	GCATC	3 cut(s)	14, 297, 766
BplI	GAGNNNNNCTC	2 cut(s)	1441, 1473
BpmI	CTGGAG	1 cut(s)	1567
Bpu10I	CCTNAGC	2 cut(s)	468, 1673
BpuEI	CTTGAG	2 cut(s)	833, 971
BsaJI	CCNNGG	6 cut(s)	196, 626, 824, 1180, 1584, 1621
BsaWI	WCCGGW	1 cut(s)	578
BsaXI	ACNNNNNCTCC	6 cut(s)	216, 246, 1300, 1327, 1330, 1357
Bsc4I	CCNNNNNNNGG	3 cut(s)	279, 1586, 1590
Bse3DI	GCAATG	2 cut(s)	87, 1639
BseBI	CCWGG	7 cut(s)	198, 566, 627, 681, 825, 1585, 1623
BseDI	CCNNGG	6 cut(s)	196, 626, 824, 1180, 1584, 1621
BseGI	GGATG	4 cut(s)	273, 314, 459, 1683
BseLI	CCNNNNNNNGG	3 cut(s)	279, 1586, 1590
BseMI	GCAATG	2 cut(s)	87, 1639
BseMII	CTCAG	4 cut(s)	69, 350, 1437, 1664
BseRI	GAGGAG	1 cut(s)	1716
BseSI	GKGCMC	4 cut(s)	161, 344, 1107, 1430
BseXI	GCAGC	5 cut(s)	79, 107, 700, 1220, 1707
BseYI	CCCAGC	1 cut(s)	1665
BshFI	GGCC	7 cut(s)	71, 322, 390, 631, 1012, 1079, 1186
BshNI	GGYRCC	1 cut(s)	1427
BsiHKAI	GWGCWC	1 cut(s)	161
BsiSI	CCGG	1 cut(s)	579
BslFI	GGGAC	1 cut(s)	1387
BslI	CCNNNNNNNGG	3 cut(s)	279, 1586, 1590
BsmAI	GTCTC	2 cut(s)	219, 601
BsmFI	GGGAC	1 cut(s)	1387
BsnI	GGCC	7 cut(s)	71, 322, 390, 631, 1012, 1079, 1186
Bsp1286I	GDGCHC	4 cut(s)	161, 344, 1107, 1430
Bsp1407I	TGTACA	2 cut(s)	369, 636
Bsp143I	GATC	3 cut(s)	705, 1549, 1738
BspACI	CCGC	1 cut(s)	1529
BspANI	GGCC	7 cut(s)	71, 322, 390, 631, 1012, 1079, 1186
BspCNI	CTCAG	4 cut(s)	70, 349, 1438, 1665
BspLI	GGNNCC	4 cut(s)	451, 1150, 1429, 1551
BspMAI	CTGCAG	2 cut(s)	97, 718
BspPI	GGATC	2 cut(s)	1544, 1557
BspT107I	GGYRCC	1 cut(s)	1427
BsrDI	GCAATG	2 cut(s)	87, 1639
BsrGI	TGTACA	2 cut(s)	369, 636
BssECI	CCNNGG	6 cut(s)	196, 626, 824, 1180, 1584, 1621
BssMI	GATC	3 cut(s)	705, 1549, 1738
BssT1I	CCWWGG	1 cut(s)	1180
Bst2UI	CCWGG	7 cut(s)	198, 566, 627, 681, 825, 1585, 1623
Bst6I	CTCTTC	2 cut(s)	410, 1464
BstAUI	TGTACA	2 cut(s)	369, 636
BstC8I	GCNNGC	2 cut(s)	100, 414
BstDEI	CTNAG	6 cut(s)	78, 336, 431, 468, 1446, 1673
BstF5I	GGATG	4 cut(s)	273, 314, 459, 1683
BstH2I	RGCGCY	1 cut(s)	475
BstHHI	GCGC	1 cut(s)	474
BstKTI	GATC	3 cut(s)	708, 1552, 1741
BstMAI	GTCTC	2 cut(s)	219, 601
BstMBI	GATC	3 cut(s)	705, 1549, 1738
BstMWI	GCNNNNNNNGC	1 cut(s)	92
BstNI	CCWGG	7 cut(s)	198, 566, 627, 681, 825, 1585, 1623
BstNSI	RCATGY	2 cut(s)	416, 1179
BstSCI	CCNGG	7 cut(s)	196, 564, 625, 679, 823, 1583, 1621
BstSFI	CTRYAG	3 cut(s)	93, 572, 714
BstSLI	GKGCMC	4 cut(s)	161, 344, 1107, 1430
BstV1I	GCAGC	5 cut(s)	79, 107, 700, 1220, 1707
BstX2I	RGATCY	1 cut(s)	1549
BstXI	CCANNNNNNTGG	3 cut(s)	284, 1438, 1629
BstYI	RGATCY	1 cut(s)	1549
BsuRI	GGCC	7 cut(s)	71, 322, 390, 631, 1012, 1079, 1186
BtsCI	GGATG	4 cut(s)	273, 314, 459, 1683
BtsI	GCAGTG	2 cut(s)	109, 1250
BtsIMutI	CAGTG	5 cut(s)	109, 186, 344, 989, 1250
Cac8I	GCNNGC	2 cut(s)	100, 414
CaiI	CAGNNNCTG	2 cut(s)	779, 1720
CfoI	GCGC	1 cut(s)	474
Cfr13I	GGNCC	6 cut(s)	200, 320, 449, 587, 629, 1184
Csp6I	GTAC	5 cut(s)	370, 637, 918, 955, 1577
CspCI	CAANNNNNGTGG	4 cut(s)	1186, 1221, 1365, 1400
CviQI	GTAC	5 cut(s)	370, 637, 918, 955, 1577
DdeI	CTNAG	6 cut(s)	78, 336, 431, 468, 1446, 1673
DpnI	GATC	3 cut(s)	707, 1551, 1740
DpnII	GATC	3 cut(s)	705, 1549, 1738
DraIII	CACNNNGTG	1 cut(s)	339
EaeI	YGGCCR	2 cut(s)	388, 1077
Eam1104I	CTCTTC	2 cut(s)	410, 1464
EarI	CTCTTC	2 cut(s)	410, 1464
Eco130I	CCWWGG	1 cut(s)	1180
Eco32I	GATATC	1 cut(s)	1654
Eco47I	GGWCC	3 cut(s)	200, 449, 587
Eco57I	CTGAAG	1 cut(s)	1227
EcoO109I	RGGNCCY	1 cut(s)	1184
EcoRI	GAATTC	1 cut(s)	945
EcoRII	CCWGG	7 cut(s)	196, 564, 625, 679, 823, 1583, 1621
EcoRV	GATATC	1 cut(s)	1654
EcoT14I	CCWWGG	1 cut(s)	1180
EcoT22I	ATGCAT	1 cut(s)	1641
ErhI	CCWWGG	1 cut(s)	1180
FaqI	GGGAC	1 cut(s)	1387
FauI	CCCGC	1 cut(s)	1536
FauNDI	CATATG	1 cut(s)	328
FbaI	TGATCA	1 cut(s)	705
Fnu4HI	GCNGC	5 cut(s)	93, 96, 714, 1209, 1721
FokI	GGATG	4 cut(s)	260, 321, 446, 1690
Fsp4HI	GCNGC	5 cut(s)	93, 96, 714, 1209, 1721
FspBI	CTAG	5 cut(s)	35, 150, 204, 1059, 1404
GlaI	GCGC	1 cut(s)	473
GluI	GCNGC	5 cut(s)	93, 96, 714, 1209, 1721
GsaI	CCCAGC	1 cut(s)	1669
GsuI	CTGGAG	1 cut(s)	1567
HaeII	RGCGCY	1 cut(s)	475
HaeIII	GGCC	7 cut(s)	71, 322, 390, 631, 1012, 1079, 1186
HapII	CCGG	1 cut(s)	579
HhaI	GCGC	1 cut(s)	474
Hin6I	GCGC	1 cut(s)	472
HinP1I	GCGC	1 cut(s)	472
HincII	GTYRAC	1 cut(s)	544
HindII	GTYRAC	1 cut(s)	544
HpaII	CCGG	1 cut(s)	579
HphI	GGTGA	5 cut(s)	15, 370, 539, 685, 1454
Hpy166II	GTNNAC	3 cut(s)	159, 370, 544
Hpy188I	TCNGA	5 cut(s)	293, 1574, 1604, 1716, 1738
Hpy188III	TCNNGA	4 cut(s)	77, 799, 950, 1069
Hpy8I	GTNNAC	3 cut(s)	159, 370, 544
HpyAV	CCTTC	6 cut(s)	215, 805, 1028, 1251, 1475, 1579
HpyCH4IV	ACGT	1 cut(s)	840
HpyCH4V	TGCA	9 cut(s)	95, 159, 301, 716, 1049, 1208, 1423, 1613, 1639
HpyF10VI	GCNNNNNNNGC	1 cut(s)	92
HpyF3I	CTNAG	6 cut(s)	78, 336, 431, 468, 1446, 1673
HpySE526I	ACGT	1 cut(s)	840
HspAI	GCGC	1 cut(s)	472
Ksp22I	TGATCA	1 cut(s)	705
Kzo9I	GATC	3 cut(s)	705, 1549, 1738
LmnI	GCTCC	1 cut(s)	484
Lsp1109I	GCAGC	5 cut(s)	79, 107, 700, 1220, 1707
LweI	GCATC	3 cut(s)	14, 297, 766
MaeI	CTAG	5 cut(s)	35, 150, 204, 1059, 1404
MaeII	ACGT	1 cut(s)	840
MaeIII	GTNAC	4 cut(s)	106, 145, 175, 331
MalI	GATC	3 cut(s)	707, 1551, 1740
MboI	GATC	3 cut(s)	705, 1549, 1738
MboII	GAAGA	6 cut(s)	38, 397, 966, 969, 1229, 1451
MfeI	CAATTG	1 cut(s)	296
MflI	RGATCY	1 cut(s)	1549
MhlI	GDGCHC	4 cut(s)	161, 344, 1107, 1430
MlsI	TGGCCA	2 cut(s)	390, 1079
MluNI	TGGCCA	2 cut(s)	390, 1079
MmeI	TCCRAC	2 cut(s)	1305, 1471
Mox20I	TGGCCA	2 cut(s)	390, 1079
Mph1103I	ATGCAT	1 cut(s)	1641
MroXI	GAANNNNTTC	1 cut(s)	1568
MscI	TGGCCA	2 cut(s)	390, 1079
MseI	TTAA	4 cut(s)	240, 615, 1218, 1661
MslI	CAYNNNNRTG	4 cut(s)	282, 839, 1361, 1467
Msp20I	TGGCCA	2 cut(s)	390, 1079
MspA1I	CMGCKG	1 cut(s)	98
MspI	CCGG	1 cut(s)	579
MspR9I	CCNGG	7 cut(s)	198, 566, 627, 681, 825, 1585, 1623
MunI	CAATTG	1 cut(s)	296
MvaI	CCWGG	7 cut(s)	198, 566, 627, 681, 825, 1585, 1623
MwoI	GCNNNNNNNGC	1 cut(s)	92
NdeI	CATATG	1 cut(s)	328
NdeII	GATC	3 cut(s)	705, 1549, 1738
NlaIV	GGNNCC	4 cut(s)	451, 1150, 1429, 1551
NmuCI	GTSAC	3 cut(s)	145, 175, 331
NsiI	ATGCAT	1 cut(s)	1641
NspI	RCATGY	2 cut(s)	416, 1179
OliI	CACNNNNGTG	2 cut(s)	839, 1361
PaeI	GCATGC	1 cut(s)	416
PdmI	GAANNNNTTC	1 cut(s)	1568
PflMI	CCANNNNNTGG	2 cut(s)	279, 1590
PkrI	GCNGC	5 cut(s)	94, 97, 715, 1210, 1722
Psp6I	CCWGG	7 cut(s)	196, 564, 625, 679, 823, 1583, 1621
PspFI	CCCAGC	1 cut(s)	1665
PspGI	CCWGG	7 cut(s)	196, 564, 625, 679, 823, 1583, 1621
PspN4I	GGNNCC	4 cut(s)	451, 1150, 1429, 1551
PspPI	GGNCC	6 cut(s)	200, 320, 449, 587, 629, 1184
PstI	CTGCAG	2 cut(s)	97, 718
PstNI	CAGNNNCTG	2 cut(s)	779, 1720
PsuI	RGATCY	1 cut(s)	1549
PvuII	CAGCTG	1 cut(s)	98
RsaI	GTAC	5 cut(s)	371, 638, 919, 956, 1578
RsaNI	GTAC	5 cut(s)	370, 637, 918, 955, 1577
RseI	CAYNNNNRTG	4 cut(s)	282, 839, 1361, 1467
SaqAI	TTAA	4 cut(s)	240, 615, 1218, 1661
SatI	GCNGC	5 cut(s)	93, 96, 714, 1209, 1721
Sau3AI	GATC	3 cut(s)	705, 1549, 1738
Sau96I	GGNCC	6 cut(s)	200, 320, 449, 587, 629, 1184
ScrFI	CCNGG	7 cut(s)	198, 566, 627, 681, 825, 1585, 1623
SduI	GDGCHC	4 cut(s)	161, 344, 1107, 1430
SfaNI	GCATC	3 cut(s)	14, 297, 766
SfcI	CTRYAG	3 cut(s)	93, 572, 714
SinI	GGWCC	3 cut(s)	200, 449, 587
SmiMI	CAYNNNNRTG	4 cut(s)	282, 839, 1361, 1467
SmlI	CTYRAG	2 cut(s)	848, 950
SmoI	CTYRAG	2 cut(s)	848, 950
SpeI	ACTAGT	2 cut(s)	1058, 1403
SphI	GCATGC	1 cut(s)	416
SsiI	CCGC	1 cut(s)	1529
SspI	AATATT	1 cut(s)	808
SspMI	CTAG	5 cut(s)	35, 150, 204, 1059, 1404
StyD4I	CCNGG	7 cut(s)	196, 564, 625, 679, 823, 1583, 1621
StyI	CCWWGG	1 cut(s)	1180
TaiI	ACGT	1 cut(s)	843
TaqI	TCGA	2 cut(s)	126, 1116
TatI	WGTACW	3 cut(s)	369, 636, 954
Tru1I	TTAA	4 cut(s)	240, 615, 1218, 1661
Tru9I	TTAA	4 cut(s)	240, 615, 1218, 1661
TscAI	CASTG	5 cut(s)	109, 186, 344, 996, 1257
TseFI	GTSAC	3 cut(s)	145, 175, 331
TseI	GCWGC	5 cut(s)	92, 95, 713, 1208, 1720
Tsp45I	GTSAC	3 cut(s)	145, 175, 331
TspDTI	ATGAA	2 cut(s)	741, 1457
TspGWI	ACGGA	2 cut(s)	563, 633
TspRI	CASTG	5 cut(s)	109, 186, 344, 996, 1257
Van91I	CCANNNNNTGG	2 cut(s)	279, 1590
VneI	GTGCAC	1 cut(s)	157
VpaK11BI	GGWCC	3 cut(s)	200, 449, 587
XapI	RAATTY	7 cut(s)	122, 945, 970, 1051, 1064, 1088, 1202
XceI	RCATGY	2 cut(s)	416, 1179
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1591
XmnI	GAANNNNTTC	1 cut(s)	1568
XspI	CTAG	5 cut(s)	35, 150, 204, 1059, 1404
Zsp2I	ATGCAT	1 cut(s)	1641

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.