Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0003501

Physical Location & Seq

Genomic Coordinates Forward (+)

36945162 .. 36948064

Gene Structure 2903 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00414620.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1758 bp

ATGGGTTATCTTCGTTTTCCGTCAATGGCGGCATTGCTCTTTTGCTTTTGTGTTGCAGTAGCTCTAATGCCAGAGTTTGCTGAAGGCAGAACAAGACACTACACTTTCAATATTAAGTACCATAATGTCACAAGGTTGTGCAGCACAAGGAGAATCATAAGTGTGAATGGAAAATTCCCAGGACCAAGACTAGTGGCAAGGGAAGGTGATCAAGTTCTCATTAAAGTGGTGAACCGGATCAAAGAGAATGTTACCATTCACTGGCATGGAATTAGGCAACTTAGAAGTGGTTGGGCAGATGGTCCGGCTTACATTACACAGTGTCCTATCCAATCTGGCCAGTCATTCATTTACAACTTCACCATCACAGGCCAGAGAGGAACTCTGTTGTATCATGCTCACATTTCATGGTTGAGAGCTACCCTTTATGGACCCATCATCATTCTCCCAAGAAGAAATGAGTCTTACCCTTTTGTGAAACCCTACAAGCAAATCCCCATTATTCTTGGAGAGTGGTTTAAAGCAGACCCTGAGGCTGTGATTAGCCAGGCTCTTCAGACTGGAGCAGGACCTAATGTTTCAGATGCGTACACTCTGAATGGGCTTCCAGGCCCCACGTACAACTGTTCATCTAATGATGTATTCAAGCTAAAGGTGAAACCTGGGAAGACATACCTCCTCCGATTGATCAACGCTGCACTCAACGACGAGCTATTCTTCAGTGTAGCCAATCATTCCCTAACCGTGGTGGATGTCGATGCTTCTTATGTCAAACCTTTCAACACTGACATACTTCTCATCACCCCTGGCCAAACCACAAATGTCCTCCTCACAACCAAGCCCAATTTCCCCAATGCCACTTTCCTCATCCTCACGAGCCCTTACTTCACCGGTGCTGGCACCCTCGACAACACGACCGCTGCTGGAATCCTTGAATATGAGAACCCACTAAGTAGTACCAGTACTCCCTCTCCCATCAAAACTCTTCCCCTCCTCAAACCAAGCCTTCCACCCATCAATGCCACCAAGTTTGTCAATGTAACCCAGTTTGTCCAAAACTTGACCAGCAAGTATCGTAGCTTGGCCAGTACTAAATTCCCAGCCAATGTCCCCCAAACAGTGGACAGGAAATTTTTCTTCACCGTAGGACTTGGAACAAGTCCATGCCCCAAAAACACGACATGCCAAGGACCGAATGGCCAAAAGTTCGCTGCCTCCATTAACAATGTATCATTTGCTCTTCCATCAGTTGCCATGCTTCAGTCACATTTCTTTGGACAGTCGAATGTGACTTACAGAACTGATTTTCCTAGCAAGCCAGTTGTGCAATTTAACTACACAGGAACTGCACCAAATAACACTAATGTGAGCAATGCAACAAGGGCAGTGGTGTTACCATTCAACACAACTGTGGAGCTGGTGTTGCAAGACACAAGCATTGTTGCTGCGGAGAGCCACCCACTTCATCTTCATGGGTATAATTTCTTTGTTGTTGGACAAGGTTTTGGAAACTTTGATCAGAACAAAGATCCTGCAAAGTTCAATCTGGTGGACCCTGTTGAGAGGAACACTGTAGGTGTTCCCGCCGGTGGTTGGGTTGCCATTCGTTTCTTGGCAGACAATCCAGGAGTGTGGTTTATGCACTGCCATTTGGAAATTCATACAAGCTGGGGACTGAGGATGGCTTGGATCGTTCAGGATGGGCATCAACCAAATCAGAAGCTACCTCCACCACCGGCAGATCTTCCAAAGTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0016491 GO:0016722 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044550 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

585

Amino Acids

64.62

Weight (kDa)

9.38

Isoelectric Point (pI)

32.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	38 - 152	2.2e-42	Multicopper oxidase
Cu-oxidase	PF00394	164 - 315	4.2e-42	Multicopper oxidase
Cu-oxidase_2	PF07731	436 - 568	6.1e-43	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003501)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G29130
fragaria_vesca	FvH4_6g13430
malus_domestica	MD03G1087400.v1.1 MD04G1131200.v1.1 MD11G1096500.v1.1 MD12G1144300.v1.1
prunus_persica	Prupe.6G072100_v2.0.a1 Prupe.6G257700_v2.0.a1
pyrus_communis	pycom03g06930 pycom04g11940 pycom11g08180 pycom12g13880
rosa_chinensis	RchiOBHm_Chr3g0466301 RchiOBHm_Chr3g0466311 RchiOBHm_Chr5g0065931
rosa_laevigata	RLG00000024588 RLG00000035828
rosa_multiflora	Rmu_co8069514.1_g000001 Rmu_co8514891.1_g000001 Rmu_sc0000350.1_g000021 Rmu_sc0003480.1_g000018 Rmu_sc0005869.1_g000003
rosa_roxburghii	Rroxscaffold_1G00015240 Rroxscaffold_6G00414620
rosa_rugosa	Rorug03G0080800 Rorug05G0375600
rosa_samantha	Rh3AG127200 Rh3BG148500 Rh3DG149200 Rh5AG433600 Rh5BG450200 Rh5CG472500 Rh5DG463600
rosa_wichuraiana	Rw3G012010 Rw5G040650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	899
AccB7I	CCANNNNNTGG	2 cut(s)	261, 1120
AciI	CCGC	4 cut(s)	29, 918, 1448, 1584
AclWI	GGATC	3 cut(s)	245, 1523, 1697
AcoI	YGGCCR	4 cut(s)	337, 808, 1083, 1198
AcsI	RAATTY	4 cut(s)	173, 1094, 1130, 1656
AcuI	CTGAAG	4 cut(s)	102, 539, 703, 1244
AfaI	GTAC	6 cut(s)	119, 590, 620, 958, 964, 1090
AfiI	CCNNNNNNNGG	5 cut(s)	261, 745, 1120, 1589, 1593
AgeI	ACCGGT	1 cut(s)	890
AgsI	TTSAA	6 cut(s)	109, 646, 781, 935, 1402, 1543
AhlI	ACTAGT	1 cut(s)	190
AjnI	CCWGG	6 cut(s)	178, 546, 607, 661, 805, 1624
AjuI	GAANNNNNNNTTGG	4 cut(s)	830, 845, 862, 877
AleI	CACNNNNGTG	2 cut(s)	1364, 1409
AloI	GAACNNNNNNTCC	2 cut(s)	1291, 1323
AluBI	AGCT	8 cut(s)	62, 419, 649, 712, 1080, 1417, 1668, 1723
AluI	AGCT	8 cut(s)	62, 419, 649, 712, 1080, 1417, 1668, 1723
AlwI	GGATC	3 cut(s)	245, 1523, 1697
AlwNI	CAGNNNCTG	2 cut(s)	530, 1346
AoxI	GGCC	6 cut(s)	337, 370, 610, 808, 1083, 1198
ApeKI	GCWGC	5 cut(s)	141, 695, 920, 1211, 1445
ApoI	RAATTY	4 cut(s)	173, 1094, 1130, 1656
AsiGI	ACCGGT	1 cut(s)	890
Asp700I	GAANNNNTTC	1 cut(s)	1133
AspS9I	GGNCC	7 cut(s)	182, 302, 431, 569, 611, 1190, 1552
AsuHPI	GGTGA	7 cut(s)	218, 241, 352, 667, 793, 880, 1132
AvaII	GGWCC	6 cut(s)	182, 302, 431, 569, 1190, 1552
AxyI	CCTNAGG	1 cut(s)	531
BalI	TGGCCA	4 cut(s)	339, 810, 1085, 1200
BanI	GGYRCC	1 cut(s)	899
BanII	GRGCYC	1 cut(s)	881
BauI	CACGAG	1 cut(s)	874
BbsI	GAAGAC	1 cut(s)	674
BbvI	GCAGC	5 cut(s)	153, 682, 907, 1198, 1432
BccI	CCATC	8 cut(s)	293, 371, 443, 983, 1022, 1252, 1675, 1694
BciT130I	CCWGG	6 cut(s)	180, 548, 609, 663, 807, 1626
BclI	TGATCA	3 cut(s)	208, 687, 1516
BcuI	ACTAGT	1 cut(s)	190
BfaI	CTAG	2 cut(s)	191, 1311
BfmI	CTRYAG	1 cut(s)	1572
BglII	AGATCT	1 cut(s)	1741
BisI	GCNGC	6 cut(s)	30, 142, 696, 921, 1212, 1446
BlsI	GCNGC	6 cut(s)	31, 143, 697, 922, 1213, 1447
BmcAI	AGTACT	2 cut(s)	964, 1090
Bme1390I	CCNGG	6 cut(s)	180, 548, 609, 663, 807, 1626
Bme18I	GGWCC	6 cut(s)	182, 302, 431, 569, 1190, 1552
BmgT120I	GGNCC	7 cut(s)	182, 302, 431, 569, 611, 1190, 1552
BmiI	GGNNCC	4 cut(s)	433, 613, 901, 1554
BmrFI	CCNGG	6 cut(s)	180, 548, 609, 663, 807, 1626
BmrI	ACTGGG	1 cut(s)	1039
BmsI	GCATC	3 cut(s)	574, 748, 1714
BmuI	ACTGGG	1 cut(s)	1039
BpiI	GAAGAC	1 cut(s)	674
BplI	GAGNNNNNCTC	2 cut(s)	367, 399
BpmI	CTGGAG	1 cut(s)	582
BsaAI	YACGTR	1 cut(s)	618
BsaBI	GATNNNNATC	1 cut(s)	1704
BsaJI	CCNNGG	5 cut(s)	178, 662, 744, 805, 1186
BsaWI	WCCGGW	2 cut(s)	234, 890
BsaXI	ACNNNNNCTCC	6 cut(s)	949, 955, 979, 985, 1406, 1436
Bsc4I	CCNNNNNNNGG	5 cut(s)	261, 745, 1120, 1589, 1593
Bse118I	RCCGGY	3 cut(s)	890, 1586, 1735
Bse1I	ACTGG	7 cut(s)	266, 340, 565, 960, 1045, 1086, 1319
Bse21I	CCTNAGG	1 cut(s)	531
Bse3DI	GCAATG	2 cut(s)	32, 1378
Bse8I	GATNNNNATC	1 cut(s)	1704
BseBI	CCWGG	6 cut(s)	180, 548, 609, 663, 807, 1626
BseDI	CCNNGG	5 cut(s)	178, 662, 744, 805, 1186
BseGI	GGATG	4 cut(s)	757, 867, 1686, 1705
BseJI	GATNNNNATC	1 cut(s)	1704
BseLI	CCNNNNNNNGG	5 cut(s)	261, 745, 1120, 1589, 1593
BseMI	GCAATG	2 cut(s)	32, 1378
BseMII	CTCAG	2 cut(s)	522, 1667
BseNI	ACTGG	7 cut(s)	266, 340, 565, 960, 1045, 1086, 1319
BseRI	GAGGAG	3 cut(s)	668, 818, 983
BseXI	GCAGC	5 cut(s)	153, 682, 907, 1198, 1432
BseYI	CCCAGC	2 cut(s)	1099, 1668
BsgI	GTGCAG	3 cut(s)	160, 681, 1332
Bsh1285I	CGRYCG	1 cut(s)	918
BshFI	GGCC	6 cut(s)	339, 372, 612, 810, 1085, 1200
BshNI	GGYRCC	1 cut(s)	899
BshTI	ACCGGT	1 cut(s)	890
BsiEI	CGRYCG	1 cut(s)	918
BsiSI	CCGG	5 cut(s)	235, 305, 891, 1587, 1736
BslFI	GGGAC	2 cut(s)	1094, 1686
BslI	CCNNNNNNNGG	5 cut(s)	261, 745, 1120, 1589, 1593
BsmFI	GGGAC	2 cut(s)	1094, 1686
BsnI	GGCC	6 cut(s)	339, 372, 612, 810, 1085, 1200
Bsp1286I	GDGCHC	1 cut(s)	881
Bsp143I	GATC	7 cut(s)	208, 237, 687, 1516, 1528, 1689, 1741
BspACI	CCGC	4 cut(s)	29, 918, 1448, 1584
BspANI	GGCC	6 cut(s)	339, 372, 612, 810, 1085, 1200
BspCNI	CTCAG	2 cut(s)	523, 1668
BspLI	GGNNCC	4 cut(s)	433, 613, 901, 1554
BspPI	GGATC	3 cut(s)	245, 1523, 1697
BspQI	GCTCTTC	2 cut(s)	558, 1245
BspT107I	GGYRCC	1 cut(s)	899
BsrDI	GCAATG	2 cut(s)	32, 1378
BsrFI	RCCGGY	3 cut(s)	890, 1586, 1735
BsrI	ACTGG	7 cut(s)	266, 340, 565, 960, 1045, 1086, 1319
BssAI	RCCGGY	3 cut(s)	890, 1586, 1735
BssECI	CCNNGG	5 cut(s)	178, 662, 744, 805, 1186
BssMI	GATC	7 cut(s)	208, 237, 687, 1516, 1528, 1689, 1741
BssSI	CACGAG	1 cut(s)	874
BssT1I	CCWWGG	1 cut(s)	1186
Bst2BI	CACGAG	1 cut(s)	874
Bst2UI	CCWGG	6 cut(s)	180, 548, 609, 663, 807, 1626
Bst4CI	ACNGT	8 cut(s)	321, 626, 745, 1120, 1144, 1281, 1411, 1573
Bst6I	CTCTTC	3 cut(s)	558, 990, 1245
BstBAI	YACGTR	1 cut(s)	618
BstC8I	GCNNGC	2 cut(s)	898, 1316
BstDEI	CTNAG	4 cut(s)	281, 531, 950, 1676
BstDSI	CCRYGG	1 cut(s)	744
BstF5I	GGATG	4 cut(s)	757, 867, 1686, 1705
BstKTI	GATC	7 cut(s)	211, 240, 690, 1519, 1531, 1692, 1744
BstMBI	GATC	7 cut(s)	208, 237, 687, 1516, 1528, 1689, 1741
BstMCI	CGRYCG	1 cut(s)	918
BstMWI	GCNNNNNNNGC	3 cut(s)	1324, 1382, 1423
BstNI	CCWGG	6 cut(s)	180, 548, 609, 663, 807, 1626
BstNSI	RCATGY	1 cut(s)	1185
BstSCI	CCNGG	6 cut(s)	178, 546, 607, 661, 805, 1624
BstSFI	CTRYAG	1 cut(s)	1572
BstV1I	GCAGC	5 cut(s)	153, 682, 907, 1198, 1432
BstV2I	GAAGAC	1 cut(s)	674
BstX2I	RGATCY	2 cut(s)	1528, 1741
BstXI	CCANNNNNNTGG	1 cut(s)	1632
BstYI	RGATCY	2 cut(s)	1528, 1741
Bsu36I	CCTNAGG	1 cut(s)	531
BsuRI	GGCC	6 cut(s)	339, 372, 612, 810, 1085, 1200
BtgI	CCRYGG	1 cut(s)	744
BtsCI	GGATG	4 cut(s)	757, 867, 1686, 1705
BtsI	GCAGTG	2 cut(s)	1392, 1642
BtsIMutI	CAGTG	8 cut(s)	259, 326, 727, 783, 1125, 1392, 1569, 1642
Cac8I	GCNNGC	2 cut(s)	898, 1316
CaiI	CAGNNNCTG	2 cut(s)	530, 1346
Cfr10I	RCCGGY	3 cut(s)	890, 1586, 1735
Cfr13I	GGNCC	7 cut(s)	182, 302, 431, 569, 611, 1190, 1552
Csp6I	GTAC	6 cut(s)	118, 589, 619, 957, 963, 1089
CspAI	ACCGGT	1 cut(s)	890
CspCI	CAANNNNNGTGG	6 cut(s)	174, 209, 1012, 1047, 1368, 1403
CviAII	CATG	7 cut(s)	266, 395, 408, 1164, 1182, 1255, 1472
CviQI	GTAC	6 cut(s)	118, 589, 619, 957, 963, 1089
DdeI	CTNAG	4 cut(s)	281, 531, 950, 1676
DpnI	GATC	7 cut(s)	210, 239, 689, 1518, 1530, 1691, 1743
DpnII	GATC	7 cut(s)	208, 237, 687, 1516, 1528, 1689, 1741
DraI	TTTAAA	1 cut(s)	520
EaeI	YGGCCR	4 cut(s)	337, 808, 1083, 1198
Eam1104I	CTCTTC	3 cut(s)	558, 990, 1245
EarI	CTCTTC	3 cut(s)	558, 990, 1245
Eco130I	CCWWGG	1 cut(s)	1186
Eco24I	GRGCYC	1 cut(s)	881
Eco47I	GGWCC	6 cut(s)	182, 302, 431, 569, 1190, 1552
Eco57I	CTGAAG	4 cut(s)	102, 539, 703, 1244
Eco81I	CCTNAGG	1 cut(s)	531
EcoO109I	RGGNCCY	2 cut(s)	569, 611
EcoRII	CCWGG	6 cut(s)	178, 546, 607, 661, 805, 1624
EcoT14I	CCWWGG	1 cut(s)	1186
EcoT38I	GRGCYC	1 cut(s)	881
ErhI	CCWWGG	1 cut(s)	1186
FaeI	CATG	7 cut(s)	269, 398, 411, 1167, 1185, 1258, 1475
FaqI	GGGAC	2 cut(s)	1094, 1686
FatI	CATG	7 cut(s)	265, 394, 407, 1163, 1181, 1254, 1471
FauI	CCCGC	1 cut(s)	1591
FbaI	TGATCA	3 cut(s)	208, 687, 1516
Fnu4HI	GCNGC	6 cut(s)	30, 142, 696, 921, 1212, 1446
FokI	GGATG	4 cut(s)	764, 854, 1693, 1712
FriOI	GRGCYC	1 cut(s)	881
Fsp4HI	GCNGC	6 cut(s)	30, 142, 696, 921, 1212, 1446
FspBI	CTAG	2 cut(s)	191, 1311
GluI	GCNGC	6 cut(s)	30, 142, 696, 921, 1212, 1446
GsaI	CCCAGC	2 cut(s)	1103, 1672
GsuI	CTGGAG	1 cut(s)	582
HaeIII	GGCC	6 cut(s)	339, 372, 612, 810, 1085, 1200
HapII	CCGG	5 cut(s)	235, 305, 891, 1587, 1736
Hin1II	CATG	7 cut(s)	269, 398, 411, 1167, 1185, 1258, 1475
HinfI	GANTC	3 cut(s)	153, 461, 927
HpaII	CCGG	5 cut(s)	235, 305, 891, 1587, 1736
HphI	GGTGA	7 cut(s)	218, 241, 352, 667, 793, 880, 1132
Hpy166II	GTNNAC	4 cut(s)	232, 591, 1123, 1552
Hpy188I	TCNGA	6 cut(s)	558, 583, 597, 683, 1521, 1719
Hpy188III	TCNNGA	2 cut(s)	874, 1697
Hpy8I	GTNNAC	4 cut(s)	232, 591, 1123, 1552
Hpy99I	CGWCG	1 cut(s)	710
HpyAV	CCTTC	3 cut(s)	77, 197, 1016
HpyCH4III	ACNGT	8 cut(s)	321, 626, 745, 1120, 1144, 1281, 1411, 1573
HpyCH4IV	ACGT	1 cut(s)	617
HpyCH4V	TGCA	9 cut(s)	56, 141, 698, 1327, 1349, 1376, 1426, 1535, 1642
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1324, 1382, 1423
HpyF3I	CTNAG	4 cut(s)	281, 531, 950, 1676
HpySE526I	ACGT	1 cut(s)	617
Hsp92II	CATG	7 cut(s)	269, 398, 411, 1167, 1185, 1258, 1475
Ksp22I	TGATCA	3 cut(s)	208, 687, 1516
Kzo9I	GATC	7 cut(s)	208, 237, 687, 1516, 1528, 1689, 1741
LguI	GCTCTTC	2 cut(s)	558, 1245
LmnI	GCTCC	2 cut(s)	563, 1414
Lsp1109I	GCAGC	5 cut(s)	153, 682, 907, 1198, 1432
LweI	GCATC	3 cut(s)	574, 748, 1714
MaeI	CTAG	2 cut(s)	191, 1311
MaeII	ACGT	1 cut(s)	617
MaeIII	GTNAC	6 cut(s)	127, 250, 1039, 1263, 1288, 1392
MalI	GATC	7 cut(s)	210, 239, 689, 1518, 1530, 1691, 1743
MboI	GATC	7 cut(s)	208, 237, 687, 1516, 1528, 1689, 1741
MboII	GAAGA	9 cut(s)	465, 545, 679, 709, 977, 1129, 1232, 1460, 1736
MflI	RGATCY	2 cut(s)	1528, 1741
MhlI	GDGCHC	1 cut(s)	881
MlsI	TGGCCA	4 cut(s)	339, 810, 1085, 1200
MluCI	AATT	8 cut(s)	173, 270, 844, 1094, 1130, 1328, 1480, 1656
MluNI	TGGCCA	4 cut(s)	339, 810, 1085, 1200
MlyI	GAGTC	1 cut(s)	470
MmeI	TCCRAC	1 cut(s)	1474
Mox20I	TGGCCA	4 cut(s)	339, 810, 1085, 1200
MroXI	GAANNNNTTC	1 cut(s)	1133
MscI	TGGCCA	4 cut(s)	339, 810, 1085, 1200
MseI	TTAA	5 cut(s)	114, 222, 519, 1221, 1332
MslI	CAYNNNNRTG	6 cut(s)	161, 224, 264, 1364, 1409, 1470
Msp20I	TGGCCA	4 cut(s)	339, 810, 1085, 1200
MspA1I	CMGCKG	1 cut(s)	920
MspI	CCGG	5 cut(s)	235, 305, 891, 1587, 1736
MspR9I	CCNGG	6 cut(s)	180, 548, 609, 663, 807, 1626
MvaI	CCWGG	6 cut(s)	180, 548, 609, 663, 807, 1626
MwoI	GCNNNNNNNGC	3 cut(s)	1324, 1382, 1423
NdeII	GATC	7 cut(s)	208, 237, 687, 1516, 1528, 1689, 1741
NlaIII	CATG	7 cut(s)	269, 398, 411, 1167, 1185, 1258, 1475
NlaIV	GGNNCC	4 cut(s)	433, 613, 901, 1554
NmuCI	GTSAC	3 cut(s)	127, 1263, 1288
NspI	RCATGY	1 cut(s)	1185
OliI	CACNNNNGTG	2 cut(s)	1364, 1409
PciSI	GCTCTTC	2 cut(s)	558, 1245
PdmI	GAANNNNTTC	1 cut(s)	1133
PfeI	GAWTC	2 cut(s)	153, 927
PflMI	CCANNNNNTGG	2 cut(s)	261, 1120
PfoI	TCCNGGA	1 cut(s)	1624
PinAI	ACCGGT	1 cut(s)	890
PkrI	GCNGC	6 cut(s)	31, 143, 697, 922, 1213, 1447
PleI	GAGTC	1 cut(s)	469
PpsI	GAGTC	1 cut(s)	469
Ppu21I	YACGTR	1 cut(s)	618
PpuMI	RGGWCCY	1 cut(s)	569
Psp5II	RGGWCCY	1 cut(s)	569
Psp6I	CCWGG	6 cut(s)	178, 546, 607, 661, 805, 1624
PspFI	CCCAGC	2 cut(s)	1099, 1668
PspGI	CCWGG	6 cut(s)	178, 546, 607, 661, 805, 1624
PspN4I	GGNNCC	4 cut(s)	433, 613, 901, 1554
PspPI	GGNCC	7 cut(s)	182, 302, 431, 569, 611, 1190, 1552
PspPPI	RGGWCCY	1 cut(s)	569
PstNI	CAGNNNCTG	2 cut(s)	530, 1346
PsuI	RGATCY	2 cut(s)	1528, 1741
RsaI	GTAC	6 cut(s)	119, 590, 620, 958, 964, 1090
RsaNI	GTAC	6 cut(s)	118, 589, 619, 957, 963, 1089
RseI	CAYNNNNRTG	6 cut(s)	161, 224, 264, 1364, 1409, 1470
SapI	GCTCTTC	2 cut(s)	558, 1245
SaqAI	TTAA	5 cut(s)	114, 222, 519, 1221, 1332
SatI	GCNGC	6 cut(s)	30, 142, 696, 921, 1212, 1446
Sau3AI	GATC	7 cut(s)	208, 237, 687, 1516, 1528, 1689, 1741
Sau96I	GGNCC	7 cut(s)	182, 302, 431, 569, 611, 1190, 1552
ScaI	AGTACT	2 cut(s)	964, 1090
SchI	GAGTC	1 cut(s)	470
ScrFI	CCNGG	6 cut(s)	180, 548, 609, 663, 807, 1626
SduI	GDGCHC	1 cut(s)	881
SfaNI	GCATC	3 cut(s)	574, 748, 1714
SfcI	CTRYAG	1 cut(s)	1572
SgrAI	CRCCGGYG	2 cut(s)	890, 1586
SinI	GGWCC	6 cut(s)	182, 302, 431, 569, 1190, 1552
SmiMI	CAYNNNNRTG	6 cut(s)	161, 224, 264, 1364, 1409, 1470
SpeI	ACTAGT	1 cut(s)	190
Sse9I	AATT	8 cut(s)	173, 270, 844, 1094, 1130, 1328, 1480, 1656
SsiI	CCGC	4 cut(s)	29, 918, 1448, 1584
SspI	AATATT	1 cut(s)	112
SspMI	CTAG	2 cut(s)	191, 1311
StyD4I	CCNGG	6 cut(s)	178, 546, 607, 661, 805, 1624
StyI	CCWWGG	1 cut(s)	1186
TaaI	ACNGT	8 cut(s)	321, 626, 745, 1120, 1144, 1281, 1411, 1573
TaiI	ACGT	1 cut(s)	620
TaqI	TCGA	3 cut(s)	756, 906, 1283
TaqII	GACCGA	1 cut(s)	1207
TasI	AATT	8 cut(s)	173, 270, 844, 1094, 1130, 1328, 1480, 1656
TatI	WGTACW	2 cut(s)	962, 1088
TauI	GCSGC	1 cut(s)	32
TfiI	GAWTC	2 cut(s)	153, 927
Tru1I	TTAA	5 cut(s)	114, 222, 519, 1221, 1332
Tru9I	TTAA	5 cut(s)	114, 222, 519, 1221, 1332
TscAI	CASTG	8 cut(s)	266, 326, 727, 790, 1125, 1392, 1576, 1649
TseFI	GTSAC	3 cut(s)	127, 1263, 1288
TseI	GCWGC	5 cut(s)	141, 695, 920, 1211, 1445
Tsp45I	GTSAC	3 cut(s)	127, 1263, 1288
TspDTI	ATGAA	6 cut(s)	337, 396, 618, 1454, 1460, 1649
TspGWI	ACGGA	1 cut(s)	9
TspRI	CASTG	8 cut(s)	266, 326, 727, 790, 1125, 1392, 1576, 1649
Van91I	CCANNNNNTGG	2 cut(s)	261, 1120
VpaK11BI	GGWCC	6 cut(s)	182, 302, 431, 569, 1190, 1552
XapI	RAATTY	4 cut(s)	173, 1094, 1130, 1656
XceI	RCATGY	1 cut(s)	1185
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1193, 1609
XmnI	GAANNNNTTC	1 cut(s)	1133
XspI	CTAG	2 cut(s)	191, 1311
ZrmI	AGTACT	2 cut(s)	964, 1090

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.