Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0003501

Physical Location & Seq

Genomic Coordinates Forward (+)

16359650 .. 16362198

Gene Structure 2549 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g13880.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1761 bp

ATGGGATCTTCTCACCTTCATTGTTCTACTTCAATGGCACCTTTGCTGTTCTGTTTTTGTGTCGTGGCGTCGTTGATGCCGGAGTTTGCCACTGGCATAACAAGGCACTACACTTTTAATGTTAAGTACCATAATGTGACCAGATTGTGCAACACAAGGAGCATTGTAAGTGTGAATGGCCAATTCCCAGGGCCTAGATTGGTGGCAAGGGAAGGTGACCAAGTCCTCATCAAAGTGGTCAATCATGTCTCAAACAATGTCACCATTCACTGGCATGGGGTGAGACAACTTAGAAGCGGATGGGCAGATGGTCCAGCTTACATTACCCAATGCCCTATACAAACAGGCCAGTCATACACATACAACTTTACCATCCAAGGGCAGAGAGGGACTCTCCTATGGCATGCTCACATCTCATGGCTGAGATCCACCCTCTATGGACCTATCATCATTCTCCCAAAGCTCAATGAGTCTTACCCTTTTGTGAAACCCTACAAGGAGGTCCCCATTCTTCTTGGAGAGTGGTTTAATGTAGATCCTGAGGCTGTGATTAATCAGGCTCTTCAGACCGGTGCAGGGCCTAACGTTTCAGATGCGTACACCATTAACGGTCTTCCGGGCCCCTTTTACAATTGTTCCTCGAAAGATGTATTCAAGCTGAAGGTGAAACCAGGGAAGACATACCTCCTCCGATTGATCAACGCTGCACTCAACGACGAGTTGTTTTTCAGCATAGCCAACCACACTCTCACGGTGGTTGAAGCCGATGCTGTCTACACCAAACCTTTTGAAACCGACACGCTTCTCATCACCCCAGGCCAAACCACGAACGTCCTCCTCAAAACCAAGCCCAATTCTCCCAATGCCACCTTCCTCATCCTCGCAAGGCCTTACTTCACCGGCGCTGGAACCCTAGACAACACCACAACGGCAGGAATCCTCGAATACGAGCACCCGATAACCACTCATCACACTTCCATCAAAACCCTTCCTCTCTTCAAACCAAGTCTTCCACCCATCAACGCCACCAAGTTTGTCAATGTCACCCAATTCGTTCTAAACTTAGCCAATAAATTCCGTAGCTTGGCCTCCAAGAAATTCCCAGCCAACGTTCCCCAAACCGTGGACCGAAAATTTTTCTTCACCGTAGGACTTGGAACATCCCCATGTCCCCAAAACTCAACTTGCCAAGGACCCAATGGCCTAAAATTTGCAGCTTCTATTAACAATTTCTCTTTTGCCCTTCCATCAACAGCAATGCTTCAAGCACATTTTTCTGGACAGTCCAATGGAGTTTACACCACAGATTTTCCGGCCAATCCGCTTGTTAAATTTAACTATACCGGAACGCCGCCAAACGTAACAACTGTGGCAAATGCCACCAAGGCATTGGTGCTGCCATTCAACACAAGTGTGGAGCTGGTGCTGCAGGACACTAGCATTCTTGGTGCCGAGAGCCACCCTCTCCATCTACATGGGTTTAATTTCTATATAGTCGGACAAGGAATTGGGAACTATGATCCTAACAAGGACCCTGCTAAGTTTAATCTGGTGGACCCCGTCGAGAGGAACACGGCTGGTGTTCCGGCTGGTGGCTGGATTGCGGTTCGTTTCATGGCAGACAATCCAGGGGTGTGGTTTATGCACTGTCACTTGGATATCCATACAAGTTGGGGGCTGAAGATGGCGTGGATCGTCCAGGATGGACCGCAAGCGAATCAAAAGCTGCCACCTCCGCCGTCCGATCTACCAAAGTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0016491 GO:0016722 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044550 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

587

Amino Acids

64.38

Weight (kDa)

8.99

Isoelectric Point (pI)

30.69

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003501)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G29130
fragaria_vesca	FvH4_6g13430
malus_domestica	MD03G1087400.v1.1 MD04G1131200.v1.1 MD11G1096500.v1.1 MD12G1144300.v1.1
prunus_persica	Prupe.6G072100_v2.0.a1 Prupe.6G257700_v2.0.a1
pyrus_communis	pycom03g06930 pycom04g11940 pycom11g08180 pycom12g13880
rosa_chinensis	RchiOBHm_Chr3g0466301 RchiOBHm_Chr3g0466311 RchiOBHm_Chr5g0065931
rosa_laevigata	RLG00000024588 RLG00000035828
rosa_multiflora	Rmu_co8069514.1_g000001 Rmu_co8514891.1_g000001 Rmu_sc0000350.1_g000021 Rmu_sc0003480.1_g000018 Rmu_sc0005869.1_g000003
rosa_roxburghii	Rroxscaffold_1G00015240 Rroxscaffold_6G00414620
rosa_rugosa	Rorug03G0080800 Rorug05G0375600
rosa_samantha	Rh3AG127200 Rh3BG148500 Rh3DG149200 Rh5AG433600 Rh5BG450200 Rh5CG472500 Rh5DG463600
rosa_wichuraiana	Rw3G012010 Rw5G040650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	37, 1448
AccB7I	CCANNNNNTGG	2 cut(s)	270, 1123
AccI	GTMKAC	1 cut(s)	774
AciI	CCGC	6 cut(s)	297, 1322, 1352, 1604, 1709, 1736
AclI	AACGTT	2 cut(s)	585, 1110
AclWI	GGATC	5 cut(s)	13, 420, 530, 1514, 1700
AcoI	YGGCCR	2 cut(s)	178, 1314
AcsI	RAATTY	5 cut(s)	1073, 1097, 1133, 1208, 1331
AcuI	CTGAAG	3 cut(s)	548, 680, 1700
AcyI	GRCGYC	1 cut(s)	68
AfaI	GTAC	2 cut(s)	128, 599
AfiI	CCNNNNNNNGG	7 cut(s)	270, 378, 576, 1084, 1123, 1566, 1592
AgeI	ACCGGT	1 cut(s)	569
AgsI	TTSAA	7 cut(s)	33, 655, 761, 791, 1000, 1265, 1405
AjnI	CCWGG	5 cut(s)	187, 670, 814, 1627, 1698
AjuI	GAANNNNNNNTTGG	2 cut(s)	854, 886
AleI	CACNNNNGTG	1 cut(s)	1412
AluBI	AGCT	7 cut(s)	317, 463, 658, 1083, 1217, 1420, 1726
AluI	AGCT	7 cut(s)	317, 463, 658, 1083, 1217, 1420, 1726
Alw21I	GWGCWC	1 cut(s)	954
Alw26I	GTCTC	2 cut(s)	253, 277
AlwI	GGATC	5 cut(s)	13, 420, 530, 1514, 1700
ApaI	GGGCCC	1 cut(s)	623
ApeKI	GCWGC	5 cut(s)	704, 1214, 1396, 1426, 1726
ApoI	RAATTY	5 cut(s)	1073, 1097, 1133, 1208, 1331
AseI	ATTAAT	1 cut(s)	552
AsiGI	ACCGGT	1 cut(s)	569
AspLEI	GCGC	1 cut(s)	905
AsuC2I	CCSGG	1 cut(s)	618
AsuHPI	GGTGA	9 cut(s)	5, 227, 253, 292, 676, 802, 889, 1036, 1135
AvaII	GGWCC	8 cut(s)	311, 440, 502, 1126, 1193, 1531, 1555, 1706
AxyI	CCTNAGG	1 cut(s)	540
BaeGI	GKGCMC	1 cut(s)	623
BalI	TGGCCA	1 cut(s)	180
BanI	GGYRCC	2 cut(s)	37, 1448
BanII	GRGCYC	1 cut(s)	623
BbsI	GAAGAC	3 cut(s)	605, 683, 1001
Bbv12I	GWGCWC	1 cut(s)	954
BbvI	GCAGC	5 cut(s)	691, 1226, 1383, 1413, 1713
BccI	CCATC	9 cut(s)	294, 302, 380, 986, 1025, 1255, 1476, 1678, 1697
BceAI	ACGGC	3 cut(s)	945, 1590, 1723
BciT130I	CCWGG	5 cut(s)	189, 672, 816, 1629, 1700
BclI	TGATCA	1 cut(s)	696
BcnI	CCSGG	1 cut(s)	618
BcoDI	GTCTC	2 cut(s)	253, 277
BfaI	CTAG	3 cut(s)	195, 914, 1437
BfmI	CTRYAG	1 cut(s)	1427
BfoI	RGCGCY	1 cut(s)	906
BglI	GCCNNNNNGGC	1 cut(s)	1385
BisI	GCNGC	6 cut(s)	705, 1215, 1352, 1397, 1427, 1727
BlsI	GCNGC	6 cut(s)	706, 1216, 1353, 1398, 1428, 1728
Bme1390I	CCNGG	6 cut(s)	189, 618, 672, 816, 1629, 1700
Bme18I	GGWCC	8 cut(s)	311, 440, 502, 1126, 1193, 1531, 1555, 1706
BmiI	GGNNCC	9 cut(s)	39, 504, 621, 622, 910, 1195, 1450, 1533, 1557
BmrFI	CCNGG	6 cut(s)	189, 618, 672, 816, 1629, 1700
BmsI	GCATC	3 cut(s)	66, 583, 757
BpiI	GAAGAC	3 cut(s)	605, 683, 1001
BplI	GAGNNNNNCTC	6 cut(s)	376, 408, 378, 410, 1447, 1479
BpuMI	CCSGG	1 cut(s)	618
BsaHI	GRCGYC	1 cut(s)	68
BsaJI	CCNNGG	9 cut(s)	187, 188, 376, 671, 814, 1122, 1189, 1383, 1628
BsaWI	WCCGGW	2 cut(s)	569, 1343
Bsc4I	CCNNNNNNNGG	7 cut(s)	270, 378, 576, 1084, 1123, 1566, 1592
Bse118I	RCCGGY	2 cut(s)	569, 899
Bse1I	ACTGG	3 cut(s)	97, 275, 349
Bse21I	CCTNAGG	1 cut(s)	540
Bse3DI	GCAATG	1 cut(s)	1263
BseBI	CCWGG	5 cut(s)	189, 672, 816, 1629, 1700
BseDI	CCNNGG	9 cut(s)	187, 188, 376, 671, 814, 1122, 1189, 1383, 1628
BseGI	GGATG	5 cut(s)	305, 372, 876, 1160, 1708
BseLI	CCNNNNNNNGG	7 cut(s)	270, 378, 576, 1084, 1123, 1566, 1592
BseMI	GCAATG	1 cut(s)	1263
BseMII	CTCAG	2 cut(s)	413, 531
BseNI	ACTGG	3 cut(s)	97, 275, 349
BseRI	GAGGAG	2 cut(s)	677, 827
BseSI	GKGCMC	1 cut(s)	623
BseXI	GCAGC	5 cut(s)	691, 1226, 1383, 1413, 1713
BseYI	CCCAGC	1 cut(s)	1102
BsgI	GTGCAG	2 cut(s)	594, 690
BshNI	GGYRCC	2 cut(s)	37, 1448
BshTI	ACCGGT	1 cut(s)	569
BsiHKAI	GWGCWC	1 cut(s)	954
BsiSI	CCGG	7 cut(s)	80, 570, 617, 900, 1313, 1344, 1586
BslFI	GGGAC	3 cut(s)	403, 488, 1155
BslI	CCNNNNNNNGG	7 cut(s)	270, 378, 576, 1084, 1123, 1566, 1592
BsmAI	GTCTC	2 cut(s)	253, 277
BsmFI	GGGAC	3 cut(s)	403, 488, 1155
BsmI	GAATGC	1 cut(s)	1440
Bsp120I	GGGCCC	1 cut(s)	619
Bsp1286I	GDGCHC	2 cut(s)	623, 954
Bsp143I	GATC	7 cut(s)	5, 425, 535, 696, 1519, 1692, 1744
BspACI	CCGC	6 cut(s)	297, 1322, 1352, 1604, 1709, 1736
BspCNI	CTCAG	2 cut(s)	414, 532
BspLI	GGNNCC	9 cut(s)	39, 504, 621, 622, 910, 1195, 1450, 1533, 1557
BspMAI	CTGCAG	1 cut(s)	1431
BspPI	GGATC	5 cut(s)	13, 420, 530, 1514, 1700
BspQI	GCTCTTC	1 cut(s)	567
BspT107I	GGYRCC	2 cut(s)	37, 1448
BsrDI	GCAATG	1 cut(s)	1263
BsrFI	RCCGGY	2 cut(s)	569, 899
BsrI	ACTGG	3 cut(s)	97, 275, 349
BssAI	RCCGGY	2 cut(s)	569, 899
BssECI	CCNNGG	9 cut(s)	187, 188, 376, 671, 814, 1122, 1189, 1383, 1628
BssMI	GATC	7 cut(s)	5, 425, 535, 696, 1519, 1692, 1744
BssNI	GRCGYC	1 cut(s)	68
BssT1I	CCWWGG	3 cut(s)	376, 1189, 1383
Bst2UI	CCWGG	5 cut(s)	189, 672, 816, 1629, 1700
Bst4CI	ACNGT	7 cut(s)	611, 754, 1123, 1147, 1284, 1369, 1649
Bst6I	CTCTTC	2 cut(s)	567, 1001
BstACI	GRCGYC	1 cut(s)	68
BstC8I	GCNNGC	2 cut(s)	405, 1713
BstDEI	CTNAG	5 cut(s)	290, 422, 540, 1063, 1539
BstDSI	CCRYGG	1 cut(s)	1122
BstEII	GGTNACC	1 cut(s)	215
BstF5I	GGATG	5 cut(s)	305, 372, 876, 1160, 1708
BstH2I	RGCGCY	1 cut(s)	906
BstHHI	GCGC	1 cut(s)	905
BstKTI	GATC	7 cut(s)	8, 428, 538, 699, 1522, 1695, 1747
BstMAI	GTCTC	2 cut(s)	253, 277
BstMBI	GATC	7 cut(s)	5, 425, 535, 696, 1519, 1692, 1744
BstMWI	GCNNNNNNNGC	3 cut(s)	1385, 1426, 1735
BstNI	CCWGG	5 cut(s)	189, 672, 816, 1629, 1700
BstNSI	RCATGY	1 cut(s)	407
BstPI	GGTNACC	1 cut(s)	215
BstSCI	CCNGG	6 cut(s)	187, 616, 670, 814, 1627, 1698
BstSFI	CTRYAG	1 cut(s)	1427
BstSLI	GKGCMC	1 cut(s)	623
BstV1I	GCAGC	5 cut(s)	691, 1226, 1383, 1413, 1713
BstV2I	GAAGAC	3 cut(s)	605, 683, 1001
BstX2I	RGATCY	3 cut(s)	5, 425, 535
BstXI	CCANNNNNNTGG	3 cut(s)	1390, 1475, 1635
BstYI	RGATCY	3 cut(s)	5, 425, 535
Bsu36I	CCTNAGG	1 cut(s)	540
BtgI	CCRYGG	1 cut(s)	1122
BtsCI	GGATG	5 cut(s)	305, 372, 876, 1160, 1708
BtsIMutI	CAGTG	3 cut(s)	90, 268, 1645
Cac8I	GCNNGC	2 cut(s)	405, 1713
CfoI	GCGC	1 cut(s)	905
Cfr10I	RCCGGY	2 cut(s)	569, 899
CseI	GACGC	1 cut(s)	57
Csp6I	GTAC	2 cut(s)	127, 598
CspAI	ACCGGT	1 cut(s)	569
CspCI	CAANNNNNGTGG	2 cut(s)	1015, 1050
CviAII	CATG	7 cut(s)	245, 275, 404, 417, 1167, 1475, 1615
CviQI	GTAC	2 cut(s)	127, 598
DdeI	CTNAG	5 cut(s)	290, 422, 540, 1063, 1539
DpnI	GATC	7 cut(s)	7, 427, 537, 698, 1521, 1694, 1746
DpnII	GATC	7 cut(s)	5, 425, 535, 696, 1519, 1692, 1744
EaeI	YGGCCR	2 cut(s)	178, 1314
Eam1104I	CTCTTC	2 cut(s)	567, 1001
EarI	CTCTTC	2 cut(s)	567, 1001
EciI	GGCGGA	1 cut(s)	1725
Eco130I	CCWWGG	3 cut(s)	376, 1189, 1383
Eco147I	AGGCCT	1 cut(s)	889
Eco24I	GRGCYC	1 cut(s)	623
Eco32I	GATATC	1 cut(s)	1660
Eco47I	GGWCC	8 cut(s)	311, 440, 502, 1126, 1193, 1531, 1555, 1706
Eco57I	CTGAAG	3 cut(s)	548, 680, 1700
Eco81I	CCTNAGG	1 cut(s)	540
Eco91I	GGTNACC	1 cut(s)	215
EcoO109I	RGGNCCY	6 cut(s)	191, 502, 578, 620, 1193, 1531
EcoO65I	GGTNACC	1 cut(s)	215
EcoRII	CCWGG	5 cut(s)	187, 670, 814, 1627, 1698
EcoRV	GATATC	1 cut(s)	1660
EcoT14I	CCWWGG	3 cut(s)	376, 1189, 1383
EcoT38I	GRGCYC	1 cut(s)	623
ErhI	CCWWGG	3 cut(s)	376, 1189, 1383
FaeI	CATG	7 cut(s)	248, 278, 407, 420, 1170, 1478, 1618
FaqI	GGGAC	3 cut(s)	403, 488, 1155
FatI	CATG	7 cut(s)	244, 274, 403, 416, 1166, 1474, 1614
FbaI	TGATCA	1 cut(s)	696
FblI	GTMKAC	1 cut(s)	774
Fnu4HI	GCNGC	6 cut(s)	705, 1215, 1352, 1397, 1427, 1727
FokI	GGATG	5 cut(s)	312, 359, 863, 1147, 1715
FriOI	GRGCYC	1 cut(s)	623
Fsp4HI	GCNGC	6 cut(s)	705, 1215, 1352, 1397, 1427, 1727
FspBI	CTAG	3 cut(s)	195, 914, 1437
GlaI	GCGC	1 cut(s)	904
GluI	GCNGC	6 cut(s)	705, 1215, 1352, 1397, 1427, 1727
GsaI	CCCAGC	1 cut(s)	1106
HaeII	RGCGCY	1 cut(s)	906
HapII	CCGG	7 cut(s)	80, 570, 617, 900, 1313, 1344, 1586
HgaI	GACGC	1 cut(s)	57
HhaI	GCGC	1 cut(s)	905
Hin1I	GRCGYC	1 cut(s)	68
Hin1II	CATG	7 cut(s)	248, 278, 407, 420, 1170, 1478, 1618
Hin6I	GCGC	1 cut(s)	903
HinP1I	GCGC	1 cut(s)	903
HinfI	GANTC	4 cut(s)	391, 470, 936, 1717
HpaII	CCGG	7 cut(s)	80, 570, 617, 900, 1313, 1344, 1586
HphI	GGTGA	9 cut(s)	5, 227, 253, 292, 676, 802, 889, 1036, 1135
Hpy166II	GTNNAC	5 cut(s)	600, 775, 1126, 1297, 1555
Hpy188I	TCNGA	5 cut(s)	567, 592, 692, 1499, 1744
Hpy188III	TCNNGA	3 cut(s)	539, 1278, 1564
Hpy8I	GTNNAC	5 cut(s)	600, 775, 1126, 1297, 1555
Hpy99I	CGWCG	3 cut(s)	73, 719, 1565
HpyAV	CCTTC	6 cut(s)	26, 206, 655, 880, 998, 1253
HpyCH4III	ACNGT	7 cut(s)	611, 754, 1123, 1147, 1284, 1369, 1649
HpyCH4IV	ACGT	4 cut(s)	585, 831, 1110, 1359
HpyCH4V	TGCA	6 cut(s)	150, 575, 707, 1214, 1429, 1645
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1385, 1426, 1735
HpyF3I	CTNAG	5 cut(s)	290, 422, 540, 1063, 1539
HpySE526I	ACGT	4 cut(s)	585, 831, 1110, 1359
Hsp92I	GRCGYC	1 cut(s)	68
Hsp92II	CATG	7 cut(s)	248, 278, 407, 420, 1170, 1478, 1618
HspAI	GCGC	1 cut(s)	903
Ksp22I	TGATCA	1 cut(s)	696
Kzo9I	GATC	7 cut(s)	5, 425, 535, 696, 1519, 1692, 1744
LguI	GCTCTTC	1 cut(s)	567
LmnI	GCTCC	2 cut(s)	159, 1417
Lsp1109I	GCAGC	5 cut(s)	691, 1226, 1383, 1413, 1713
LweI	GCATC	3 cut(s)	66, 583, 757
MaeI	CTAG	3 cut(s)	195, 914, 1437
MaeII	ACGT	4 cut(s)	585, 831, 1110, 1359
MaeIII	GTNAC	6 cut(s)	136, 215, 259, 1042, 1360, 1649
MalI	GATC	7 cut(s)	7, 427, 537, 698, 1521, 1694, 1746
MboI	GATC	7 cut(s)	5, 425, 535, 696, 1519, 1692, 1744
MboII	GAAGA	8 cut(s)	503, 554, 605, 688, 988, 1001, 1132, 1693
MfeI	CAATTG	1 cut(s)	631
MflI	RGATCY	3 cut(s)	5, 425, 535
MhlI	GDGCHC	2 cut(s)	623, 954
MlsI	TGGCCA	1 cut(s)	180
MluNI	TGGCCA	1 cut(s)	180
MlyI	GAGTC	2 cut(s)	385, 479
MmeI	TCCRAC	1 cut(s)	1477
Mox20I	TGGCCA	1 cut(s)	180
MscI	TGGCCA	1 cut(s)	180
MslI	CAYNNNNRTG	5 cut(s)	233, 273, 1165, 1412, 1473
Msp20I	TGGCCA	1 cut(s)	180
MspI	CCGG	7 cut(s)	80, 570, 617, 900, 1313, 1344, 1586
MspR9I	CCNGG	6 cut(s)	189, 618, 672, 816, 1629, 1700
MunI	CAATTG	1 cut(s)	631
Mva1269I	GAATGC	1 cut(s)	1440
MvaI	CCWGG	5 cut(s)	189, 672, 816, 1629, 1700
MwoI	GCNNNNNNNGC	3 cut(s)	1385, 1426, 1735
NciI	CCSGG	1 cut(s)	618
NdeII	GATC	7 cut(s)	5, 425, 535, 696, 1519, 1692, 1744
NlaIII	CATG	7 cut(s)	248, 278, 407, 420, 1170, 1478, 1618
NlaIV	GGNNCC	9 cut(s)	39, 504, 621, 622, 910, 1195, 1450, 1533, 1557
NmeAIII	GCCGAG	1 cut(s)	1477
NmuCI	GTSAC	5 cut(s)	136, 215, 259, 1042, 1649
NspI	RCATGY	1 cut(s)	407
OliI	CACNNNNGTG	1 cut(s)	1412
PaeI	GCATGC	1 cut(s)	407
PasI	CCCWGGG	1 cut(s)	188
PceI	AGGCCT	1 cut(s)	889
PciSI	GCTCTTC	1 cut(s)	567
PctI	GAATGC	1 cut(s)	1440
PfeI	GAWTC	2 cut(s)	936, 1717
PflFI	GACNNNGTC	2 cut(s)	221, 1559
PflMI	CCANNNNNTGG	2 cut(s)	270, 1123
PfoI	TCCNGGA	1 cut(s)	1698
PinAI	ACCGGT	1 cut(s)	569
PkrI	GCNGC	6 cut(s)	706, 1216, 1353, 1398, 1428, 1728
PleI	GAGTC	2 cut(s)	385, 478
PpsI	GAGTC	2 cut(s)	385, 478
PpuMI	RGGWCCY	3 cut(s)	502, 1193, 1531
PshBI	ATTAAT	1 cut(s)	552
Psp1406I	AACGTT	2 cut(s)	585, 1110
Psp5II	RGGWCCY	3 cut(s)	502, 1193, 1531
Psp6I	CCWGG	5 cut(s)	187, 670, 814, 1627, 1698
PspEI	GGTNACC	1 cut(s)	215
PspFI	CCCAGC	1 cut(s)	1102
PspGI	CCWGG	5 cut(s)	187, 670, 814, 1627, 1698
PspN4I	GGNNCC	9 cut(s)	39, 504, 621, 622, 910, 1195, 1450, 1533, 1557
PspOMI	GGGCCC	1 cut(s)	619
PspPPI	RGGWCCY	3 cut(s)	502, 1193, 1531
PstI	CTGCAG	1 cut(s)	1431
PsuI	RGATCY	3 cut(s)	5, 425, 535
PsyI	GACNNNGTC	2 cut(s)	221, 1559
RsaI	GTAC	2 cut(s)	128, 599
RsaNI	GTAC	2 cut(s)	127, 598
RseI	CAYNNNNRTG	5 cut(s)	233, 273, 1165, 1412, 1473
SapI	GCTCTTC	1 cut(s)	567
SatI	GCNGC	6 cut(s)	705, 1215, 1352, 1397, 1427, 1727
Sau3AI	GATC	7 cut(s)	5, 425, 535, 696, 1519, 1692, 1744
SchI	GAGTC	2 cut(s)	385, 479
ScrFI	CCNGG	6 cut(s)	189, 618, 672, 816, 1629, 1700
SduI	GDGCHC	2 cut(s)	623, 954
SfaNI	GCATC	3 cut(s)	66, 583, 757
SfcI	CTRYAG	1 cut(s)	1427
SgrAI	CRCCGGYG	1 cut(s)	899
SinI	GGWCC	8 cut(s)	311, 440, 502, 1126, 1193, 1531, 1555, 1706
SmiMI	CAYNNNNRTG	5 cut(s)	233, 273, 1165, 1412, 1473
SphI	GCATGC	1 cut(s)	407
SseBI	AGGCCT	1 cut(s)	889
SsiI	CCGC	6 cut(s)	297, 1322, 1352, 1604, 1709, 1736
SspMI	CTAG	3 cut(s)	195, 914, 1437
StuI	AGGCCT	1 cut(s)	889
StyD4I	CCNGG	6 cut(s)	187, 616, 670, 814, 1627, 1698
StyI	CCWWGG	3 cut(s)	376, 1189, 1383
TaaI	ACNGT	7 cut(s)	611, 754, 1123, 1147, 1284, 1369, 1649
TaiI	ACGT	4 cut(s)	588, 834, 1113, 1362
TaqI	TCGA	3 cut(s)	641, 942, 1563
TaqII	GACCGA	1 cut(s)	1143
TauI	GCSGC	1 cut(s)	1354
TfiI	GAWTC	2 cut(s)	936, 1717
TscAI	CASTG	3 cut(s)	97, 275, 1652
TseFI	GTSAC	5 cut(s)	136, 215, 259, 1042, 1649
TseI	GCWGC	5 cut(s)	704, 1214, 1396, 1426, 1726
Tsp45I	GTSAC	5 cut(s)	136, 215, 259, 1042, 1649
TspDTI	ATGAA	2 cut(s)	8, 1603
TspGWI	ACGGA	1 cut(s)	1067
TspRI	CASTG	3 cut(s)	97, 275, 1652
Tth111I	GACNNNGTC	2 cut(s)	221, 1559
Van91I	CCANNNNNTGG	2 cut(s)	270, 1123
VpaK11BI	GGWCC	8 cut(s)	311, 440, 502, 1126, 1193, 1531, 1555, 1706
VspI	ATTAAT	1 cut(s)	552
XapI	RAATTY	5 cut(s)	1073, 1097, 1133, 1208, 1331
XceI	RCATGY	1 cut(s)	407
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1196, 1387
XmiI	GTMKAC	1 cut(s)	774
XspI	CTAG	3 cut(s)	195, 914, 1437

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.