Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0003501

Physical Location & Seq

Genomic Coordinates Forward (+)

21811915 .. 21815253

Gene Structure 3339 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1131200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1761 bp

ATGGGTTCTTCTCATTTGCCTTGTTCTACTTCAATGGCAGCTTTTCTGTTCAGTTTTTGTGTTGTGGCATTGTTGACGCCGGAGTTTGTTTCCGGCATAACAAGACACCACACTTTCAATATTAAGTATCATAATGTGACTAGATTGTGCAACACAAGGAGCATTGTAAGTGTGAATGAAAAATTCCCAGGTCCTAGGTTGGTGGCAAGGGAGGGTGACCAAGTCCTCATCAAAGTGGTCAATCATGTCTCAAACAATGTCACCATTCACTGGCATGGGGTTAAACAACTTAGAAGTGGATGGGCAGATGGTCCAGCTTACGTTACCCAATGCCCTATACAGATGGGCCAGTCATACACATATAACTTTACCATCCAAGGGCAGAGAGGGACTCTGCTATGGCATGCTCACGTCTCATGGCTGAGATCTACCATCTATGGACCTATCATCATTCTCCCAAAGCGCAATGAGTCTTACCCTTTTGTGAAACCCTACAAGGAGGTCCCCATTCTTCTTGGAGAGTGGTTTAATGTAGACCCTGAGGCTGTAATTAATCAGGCTCTTCAGACCGGTGGAGGACCTAATGTTTCGGACGCATTCACCATTAACGGTCTTCCAGGCCCCTTGTACAACTGTTCATCTAAAGATGTATTCAAGTTAAAGGTCAAACCAGGGAAGACATACCTCCTCCGGTTGATCAACGCCGCTCTCAATGATGAGCTATTCTTTAGCATAGCCAACCACACTCTCACGGTGGTTGAAGCCGATGCTGTCTACACCAAACCCTTTGAAACCGATACGCTTCTCATCGCCCCAGGGCAAACCACAAACGTCCTCCTCAAAACCAAGCCCAATTCTCCCAATGCCACATTCCTCATCCTGGCAAGTCCTTACTTCACCGGGCGTGGAACCCTAGACAACACCACCACGGCTGGAATCCTCGAATATGAGCACCCGATAACCACTCTTCACACTTCCATCAAAACCCTTCCTCTCTTCAAACCGAGTCTTCCACCTTTCAATGCCACCAAGTTTGTCAATGTTACCCAATTCGTCCAAAACTTAGCCAAAAAATTCCGTAGCTTGGCTTCCAAGAAATTCCCCGCCAACGTTCCCCAAACCGTGGACAAAAAATTCTTCTTTACCATAGGTCTTGGAACAGCCCCTTGTCCCCAAAATTCAACTTGCCAAGGTCCCAATGGCCTGAAATTTGCAGCGTCTGTTAACAATTTCTCTTTTGCCCTTCCATCAACAGCAATGCTTCAAGCACATTTTTCTGGACAATCCAATGGAGTTTACACCACAGATTTTCCAGCCAATCCTCTAGTGACATTTAACTATACCGGAACGCCGCCAAATGTCACAAATGTGGCAAATGGCACGAAGGCATTGGTGCTGCCATTCAACACAAGTGTGGAGCTGGTACTGCAGGACACTAGCATTCTTGGTGCCGAGAGCCACCCTCTCCATTTACACGGTTTTAATTTCTTTGTAGTTGGACAAGGGTTTGGGAACTACGATCCTAACAAGGACCCTGCTAAGTTTAATCTGGTGGACCCCATCGAGAGGAACACGGCTGGTGTTCCGGCTGGTGGGTGGATTGCGGTTCGTTTCTTAGCAGACAATCCAGGGGTGTGGCTTATGCACTGTCATTTGGATATCCATACAAGTTGGGGGCTGAGGATGGCGTGGATCGTCCAGGATGGACCGCAAGCGAATCAAAAGCTGCCACCTCCGCCGTCCGATCTTCCGAAGTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0016491 GO:0016722 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044550 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

587

Amino Acids

64.3

Weight (kDa)

9.1

Isoelectric Point (pI)

30.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	41 - 155	2.8e-41	Multicopper oxidase
Cu-oxidase	PF00394	167 - 318	7.8e-46	Multicopper oxidase
Cu-oxidase_2	PF07731	438 - 568	1.1e-39	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003501)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G29130
fragaria_vesca	FvH4_6g13430
malus_domestica	MD03G1087400.v1.1 MD04G1131200.v1.1 MD11G1096500.v1.1 MD12G1144300.v1.1
prunus_persica	Prupe.6G072100_v2.0.a1 Prupe.6G257700_v2.0.a1
pyrus_communis	pycom03g06930 pycom04g11940 pycom11g08180 pycom12g13880
rosa_chinensis	RchiOBHm_Chr3g0466301 RchiOBHm_Chr3g0466311 RchiOBHm_Chr5g0065931
rosa_laevigata	RLG00000024588 RLG00000035828
rosa_multiflora	Rmu_co8069514.1_g000001 Rmu_co8514891.1_g000001 Rmu_sc0000350.1_g000021 Rmu_sc0003480.1_g000018 Rmu_sc0005869.1_g000003
rosa_roxburghii	Rroxscaffold_1G00015240 Rroxscaffold_6G00414620
rosa_rugosa	Rorug03G0080800 Rorug05G0375600
rosa_samantha	Rh3AG127200 Rh3BG148500 Rh3DG149200 Rh5AG433600 Rh5BG450200 Rh5CG472500 Rh5DG463600
rosa_wichuraiana	Rw3G012010 Rw5G040650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1448
AccB7I	CCANNNNNTGG	2 cut(s)	270, 1123
AccBSI	CCGCTC	1 cut(s)	707
AccI	GTMKAC	2 cut(s)	534, 774
AciI	CCGC	6 cut(s)	705, 1104, 1352, 1604, 1709, 1736
AclI	AACGTT	1 cut(s)	1110
AclWI	GGATC	2 cut(s)	1514, 1700
AcsI	RAATTY	6 cut(s)	182, 1073, 1097, 1133, 1177, 1208
AcuI	CTGAAG	1 cut(s)	548
AcyI	GRCGYC	1 cut(s)	77
AfaI	GTAC	2 cut(s)	629, 1425
AfiI	CCNNNNNNNGG	7 cut(s)	270, 378, 880, 1084, 1123, 1566, 1592
AgeI	ACCGGT	1 cut(s)	569
AjiI	CACGTC	1 cut(s)	412
AjnI	CCWGG	7 cut(s)	187, 616, 670, 814, 879, 1627, 1698
AjuI	GAANNNNNNNTTGG	2 cut(s)	854, 886
AleI	CACNNNNGTG	2 cut(s)	1367, 1412
AluBI	AGCT	6 cut(s)	41, 317, 721, 1083, 1420, 1726
AluI	AGCT	6 cut(s)	41, 317, 721, 1083, 1420, 1726
Alw21I	GWGCWC	1 cut(s)	954
Alw26I	GTCTC	2 cut(s)	253, 418
AlwI	GGATC	2 cut(s)	1514, 1700
AlwNI	CAGNNNCTG	1 cut(s)	1220
AoxI	GGCC	3 cut(s)	346, 619, 1201
ApeKI	GCWGC	4 cut(s)	38, 1214, 1396, 1726
ApoI	RAATTY	6 cut(s)	182, 1073, 1097, 1133, 1177, 1208
AseI	ATTAAT	1 cut(s)	552
AsiGI	ACCGGT	1 cut(s)	569
AspA2I	CCTAGG	1 cut(s)	194
AspLEI	GCGC	1 cut(s)	465
AsuC2I	CCSGG	1 cut(s)	901
AsuHPI	GGTGA	4 cut(s)	227, 253, 592, 889
AvaII	GGWCC	9 cut(s)	191, 311, 440, 502, 578, 1193, 1531, 1555, 1706
AvrII	CCTAGG	1 cut(s)	194
AxyI	CCTNAGG	1 cut(s)	540
BanI	GGYRCC	1 cut(s)	1448
BarI	GAAGNNNNNNTAC	2 cut(s)	1072, 1104
BbsI	GAAGAC	3 cut(s)	605, 683, 1001
Bbv12I	GWGCWC	1 cut(s)	954
BbvCI	CCTCAGC	1 cut(s)	1679
BbvI	GCAGC	4 cut(s)	50, 1226, 1383, 1713
BceAI	ACGGC	3 cut(s)	945, 1590, 1723
BciT130I	CCWGG	7 cut(s)	189, 618, 672, 816, 881, 1629, 1700
BclI	TGATCA	1 cut(s)	696
BcnI	CCSGG	1 cut(s)	901
BcoDI	GTCTC	2 cut(s)	253, 418
BfaI	CTAG	5 cut(s)	141, 195, 914, 1325, 1437
BfmI	CTRYAG	1 cut(s)	1427
BglII	AGATCT	1 cut(s)	425
BisI	GCNGC	6 cut(s)	39, 705, 1215, 1352, 1397, 1727
BlnI	CCTAGG	1 cut(s)	194
BlsI	GCNGC	6 cut(s)	40, 706, 1216, 1353, 1398, 1728
Bme1390I	CCNGG	8 cut(s)	189, 618, 672, 816, 881, 901, 1629, 1700
Bme18I	GGWCC	9 cut(s)	191, 311, 440, 502, 578, 1193, 1531, 1555, 1706
BmgBI	CACGTC	1 cut(s)	412
BmiI	GGNNCC	7 cut(s)	504, 622, 910, 1195, 1450, 1533, 1557
BmrFI	CCNGG	8 cut(s)	189, 618, 672, 816, 881, 901, 1629, 1700
BmsI	GCATC	1 cut(s)	757
BpiI	GAAGAC	3 cut(s)	605, 683, 1001
BplI	GAGNNNNNCTC	4 cut(s)	376, 408, 1447, 1479
Bpu10I	CCTNAGC	1 cut(s)	1679
BpuMI	CCSGG	1 cut(s)	901
BsaHI	GRCGYC	1 cut(s)	77
BsaWI	WCCGGW	3 cut(s)	569, 690, 1343
Bsc4I	CCNNNNNNNGG	7 cut(s)	270, 378, 880, 1084, 1123, 1566, 1592
Bse118I	RCCGGY	1 cut(s)	569
Bse1I	ACTGG	2 cut(s)	275, 349
Bse21I	CCTNAGG	1 cut(s)	540
Bse3DI	GCAATG	2 cut(s)	472, 1263
BseBI	CCWGG	7 cut(s)	189, 618, 672, 816, 881, 1629, 1700
BseGI	GGATG	5 cut(s)	305, 372, 876, 1689, 1708
BseLI	CCNNNNNNNGG	7 cut(s)	270, 378, 880, 1084, 1123, 1566, 1592
BseMI	GCAATG	2 cut(s)	472, 1263
BseMII	CTCAG	3 cut(s)	413, 531, 1670
BseNI	ACTGG	2 cut(s)	275, 349
BseRI	GAGGAG	2 cut(s)	677, 827
BseXI	GCAGC	4 cut(s)	50, 1226, 1383, 1713
BshFI	GGCC	3 cut(s)	348, 621, 1203
BshNI	GGYRCC	1 cut(s)	1448
BshTI	ACCGGT	1 cut(s)	569
BsiHKAI	GWGCWC	1 cut(s)	954
BsiSI	CCGG	7 cut(s)	80, 93, 570, 691, 900, 1344, 1586
BslFI	GGGAC	4 cut(s)	403, 488, 1155, 1179
BslI	CCNNNNNNNGG	7 cut(s)	270, 378, 880, 1084, 1123, 1566, 1592
BsmAI	GTCTC	2 cut(s)	253, 418
BsmBI	CGTCTC	1 cut(s)	418
BsmFI	GGGAC	4 cut(s)	403, 488, 1155, 1179
BsmI	GAATGC	2 cut(s)	596, 1440
BsnI	GGCC	3 cut(s)	348, 621, 1203
Bsp1286I	GDGCHC	1 cut(s)	954
Bsp1407I	TGTACA	1 cut(s)	627
Bsp143I	GATC	5 cut(s)	425, 696, 1519, 1692, 1744
BspACI	CCGC	6 cut(s)	705, 1104, 1352, 1604, 1709, 1736
BspANI	GGCC	3 cut(s)	348, 621, 1203
BspCNI	CTCAG	3 cut(s)	414, 532, 1671
BspLI	GGNNCC	7 cut(s)	504, 622, 910, 1195, 1450, 1533, 1557
BspMAI	CTGCAG	1 cut(s)	1431
BspPI	GGATC	2 cut(s)	1514, 1700
BspQI	GCTCTTC	1 cut(s)	567
BspT107I	GGYRCC	1 cut(s)	1448
BsrBI	CCGCTC	1 cut(s)	707
BsrDI	GCAATG	2 cut(s)	472, 1263
BsrFI	RCCGGY	1 cut(s)	569
BsrGI	TGTACA	1 cut(s)	627
BsrI	ACTGG	2 cut(s)	275, 349
BssAI	RCCGGY	1 cut(s)	569
BssMI	GATC	5 cut(s)	425, 696, 1519, 1692, 1744
BssNI	GRCGYC	1 cut(s)	77
BssT1I	CCWWGG	3 cut(s)	194, 376, 1189
Bst2UI	CCWGG	7 cut(s)	189, 618, 672, 816, 881, 1629, 1700
Bst4CI	ACNGT	6 cut(s)	611, 635, 754, 1123, 1478, 1649
Bst6I	CTCTTC	3 cut(s)	567, 972, 1001
BstACI	GRCGYC	1 cut(s)	77
BstAUI	TGTACA	1 cut(s)	627
BstC8I	GCNNGC	2 cut(s)	405, 1713
BstDEI	CTNAG	7 cut(s)	290, 422, 540, 1063, 1539, 1615, 1679
BstDSI	CCRYGG	2 cut(s)	927, 1122
BstEII	GGTNACC	1 cut(s)	215
BstF5I	GGATG	5 cut(s)	305, 372, 876, 1689, 1708
BstHHI	GCGC	1 cut(s)	465
BstKTI	GATC	5 cut(s)	428, 699, 1522, 1695, 1747
BstMAI	GTCTC	2 cut(s)	253, 418
BstMBI	GATC	5 cut(s)	425, 696, 1519, 1692, 1744
BstMWI	GCNNNNNNNGC	2 cut(s)	1426, 1735
BstNI	CCWGG	7 cut(s)	189, 618, 672, 816, 881, 1629, 1700
BstNSI	RCATGY	1 cut(s)	407
BstPI	GGTNACC	1 cut(s)	215
BstSCI	CCNGG	8 cut(s)	187, 616, 670, 814, 879, 899, 1627, 1698
BstSFI	CTRYAG	1 cut(s)	1427
BstV1I	GCAGC	4 cut(s)	50, 1226, 1383, 1713
BstV2I	GAAGAC	3 cut(s)	605, 683, 1001
BstX2I	RGATCY	1 cut(s)	425
BstXI	CCANNNNNNTGG	1 cut(s)	1635
BstYI	RGATCY	1 cut(s)	425
Bsu36I	CCTNAGG	1 cut(s)	540
BsuRI	GGCC	3 cut(s)	348, 621, 1203
BtgI	CCRYGG	2 cut(s)	927, 1122
BtgZI	GCGATG	1 cut(s)	793
BtrI	CACGTC	1 cut(s)	412
BtsCI	GGATG	5 cut(s)	305, 372, 876, 1689, 1708
BtsIMutI	CAGTG	2 cut(s)	268, 1645
Cac8I	GCNNGC	2 cut(s)	405, 1713
CaiI	CAGNNNCTG	1 cut(s)	1220
CfoI	GCGC	1 cut(s)	465
Cfr10I	RCCGGY	1 cut(s)	569
CseI	GACGC	3 cut(s)	85, 602, 1206
Csp6I	GTAC	2 cut(s)	628, 1424
CspAI	ACCGGT	1 cut(s)	569
CspCI	CAANNNNNGTGG	2 cut(s)	1015, 1050
CviAII	CATG	4 cut(s)	245, 275, 404, 417
CviQI	GTAC	2 cut(s)	628, 1424
DdeI	CTNAG	7 cut(s)	290, 422, 540, 1063, 1539, 1615, 1679
DpnI	GATC	5 cut(s)	427, 698, 1521, 1694, 1746
DpnII	GATC	5 cut(s)	425, 696, 1519, 1692, 1744
Eam1104I	CTCTTC	3 cut(s)	567, 972, 1001
EarI	CTCTTC	3 cut(s)	567, 972, 1001
EciI	GGCGGA	1 cut(s)	1725
Eco130I	CCWWGG	3 cut(s)	194, 376, 1189
Eco32I	GATATC	1 cut(s)	1660
Eco47I	GGWCC	9 cut(s)	191, 311, 440, 502, 578, 1193, 1531, 1555, 1706
Eco57I	CTGAAG	1 cut(s)	548
Eco81I	CCTNAGG	1 cut(s)	540
Eco91I	GGTNACC	1 cut(s)	215
EcoO109I	RGGNCCY	6 cut(s)	191, 502, 578, 620, 1193, 1531
EcoO65I	GGTNACC	1 cut(s)	215
EcoRII	CCWGG	7 cut(s)	187, 616, 670, 814, 879, 1627, 1698
EcoRV	GATATC	1 cut(s)	1660
EcoT14I	CCWWGG	3 cut(s)	194, 376, 1189
ErhI	CCWWGG	3 cut(s)	194, 376, 1189
Esp3I	CGTCTC	1 cut(s)	418
FaeI	CATG	4 cut(s)	248, 278, 407, 420
FaqI	GGGAC	4 cut(s)	403, 488, 1155, 1179
FatI	CATG	4 cut(s)	244, 274, 403, 416
FauI	CCCGC	1 cut(s)	1111
FbaI	TGATCA	1 cut(s)	696
FblI	GTMKAC	2 cut(s)	534, 774
Fnu4HI	GCNGC	6 cut(s)	39, 705, 1215, 1352, 1397, 1727
FokI	GGATG	5 cut(s)	312, 359, 863, 1696, 1715
Fsp4HI	GCNGC	6 cut(s)	39, 705, 1215, 1352, 1397, 1727
FspBI	CTAG	5 cut(s)	141, 195, 914, 1325, 1437
GlaI	GCGC	1 cut(s)	464
GluI	GCNGC	6 cut(s)	39, 705, 1215, 1352, 1397, 1727
HaeIII	GGCC	3 cut(s)	348, 621, 1203
HapII	CCGG	7 cut(s)	80, 93, 570, 691, 900, 1344, 1586
HgaI	GACGC	3 cut(s)	85, 602, 1206
HhaI	GCGC	1 cut(s)	465
Hin1I	GRCGYC	1 cut(s)	77
Hin1II	CATG	4 cut(s)	248, 278, 407, 420
Hin6I	GCGC	1 cut(s)	463
HinP1I	GCGC	1 cut(s)	463
HincII	GTYRAC	2 cut(s)	75, 1225
HindII	GTYRAC	2 cut(s)	75, 1225
HinfI	GANTC	5 cut(s)	391, 470, 936, 1006, 1717
HpaI	GTTAAC	1 cut(s)	1225
HpaII	CCGG	7 cut(s)	80, 93, 570, 691, 900, 1344, 1586
HphI	GGTGA	4 cut(s)	227, 253, 592, 889
Hpy166II	GTNNAC	7 cut(s)	75, 535, 775, 1126, 1225, 1297, 1555
Hpy188I	TCNGA	4 cut(s)	567, 592, 1744, 1752
Hpy188III	TCNNGA	2 cut(s)	1278, 1564
Hpy8I	GTNNAC	7 cut(s)	75, 535, 775, 1126, 1225, 1297, 1555
HpyAV	CCTTC	3 cut(s)	998, 1253, 1378
HpyCH4III	ACNGT	6 cut(s)	611, 635, 754, 1123, 1478, 1649
HpyCH4IV	ACGT	4 cut(s)	321, 411, 831, 1110
HpyCH4V	TGCA	4 cut(s)	150, 1214, 1429, 1645
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1426, 1735
HpyF3I	CTNAG	7 cut(s)	290, 422, 540, 1063, 1539, 1615, 1679
HpySE526I	ACGT	4 cut(s)	321, 411, 831, 1110
Hsp92I	GRCGYC	1 cut(s)	77
Hsp92II	CATG	4 cut(s)	248, 278, 407, 420
HspAI	GCGC	1 cut(s)	463
Ksp22I	TGATCA	1 cut(s)	696
KspAI	GTTAAC	1 cut(s)	1225
Kzo9I	GATC	5 cut(s)	425, 696, 1519, 1692, 1744
LguI	GCTCTTC	1 cut(s)	567
LmnI	GCTCC	2 cut(s)	159, 1417
Lsp1109I	GCAGC	4 cut(s)	50, 1226, 1383, 1713
LweI	GCATC	1 cut(s)	757
MaeI	CTAG	5 cut(s)	141, 195, 914, 1325, 1437
MaeII	ACGT	4 cut(s)	321, 411, 831, 1110
MaeIII	GTNAC	7 cut(s)	136, 215, 259, 322, 1042, 1327, 1360
MalI	GATC	5 cut(s)	427, 698, 1521, 1694, 1746
MbiI	CCGCTC	1 cut(s)	707
MboI	GATC	5 cut(s)	425, 696, 1519, 1692, 1744
MboII	GAAGA	9 cut(s)	503, 554, 605, 688, 959, 988, 1001, 1129, 1739
MflI	RGATCY	1 cut(s)	425
MhlI	GDGCHC	1 cut(s)	954
MlyI	GAGTC	3 cut(s)	385, 479, 1015
MmeI	TCCRAC	1 cut(s)	1477
MslI	CAYNNNNRTG	4 cut(s)	233, 273, 1367, 1412
MspI	CCGG	7 cut(s)	80, 93, 570, 691, 900, 1344, 1586
MspR9I	CCNGG	8 cut(s)	189, 618, 672, 816, 881, 901, 1629, 1700
Mva1269I	GAATGC	2 cut(s)	596, 1440
MvaI	CCWGG	7 cut(s)	189, 618, 672, 816, 881, 1629, 1700
MwoI	GCNNNNNNNGC	2 cut(s)	1426, 1735
NciI	CCSGG	1 cut(s)	901
NdeII	GATC	5 cut(s)	425, 696, 1519, 1692, 1744
NlaIII	CATG	4 cut(s)	248, 278, 407, 420
NlaIV	GGNNCC	7 cut(s)	504, 622, 910, 1195, 1450, 1533, 1557
NmeAIII	GCCGAG	1 cut(s)	1477
NmuCI	GTSAC	5 cut(s)	136, 215, 259, 1327, 1360
NspI	RCATGY	1 cut(s)	407
OliI	CACNNNNGTG	2 cut(s)	1367, 1412
PaeI	GCATGC	1 cut(s)	407
PasI	CCCWGGG	1 cut(s)	815
PciSI	GCTCTTC	1 cut(s)	567
PctI	GAATGC	2 cut(s)	596, 1440
PfeI	GAWTC	2 cut(s)	936, 1717
PflFI	GACNNNGTC	1 cut(s)	221
PflMI	CCANNNNNTGG	2 cut(s)	270, 1123
PfoI	TCCNGGA	1 cut(s)	1698
PinAI	ACCGGT	1 cut(s)	569
PkrI	GCNGC	6 cut(s)	40, 706, 1216, 1353, 1398, 1728
PleI	GAGTC	3 cut(s)	385, 478, 1014
PpsI	GAGTC	3 cut(s)	385, 478, 1014
PpuMI	RGGWCCY	5 cut(s)	191, 502, 578, 1193, 1531
PshBI	ATTAAT	1 cut(s)	552
Psp1406I	AACGTT	1 cut(s)	1110
Psp5II	RGGWCCY	5 cut(s)	191, 502, 578, 1193, 1531
Psp6I	CCWGG	7 cut(s)	187, 616, 670, 814, 879, 1627, 1698
PspEI	GGTNACC	1 cut(s)	215
PspGI	CCWGG	7 cut(s)	187, 616, 670, 814, 879, 1627, 1698
PspN4I	GGNNCC	7 cut(s)	504, 622, 910, 1195, 1450, 1533, 1557
PspPPI	RGGWCCY	5 cut(s)	191, 502, 578, 1193, 1531
PstI	CTGCAG	1 cut(s)	1431
PstNI	CAGNNNCTG	1 cut(s)	1220
PsuI	RGATCY	1 cut(s)	425
PsyI	GACNNNGTC	1 cut(s)	221
RsaI	GTAC	2 cut(s)	629, 1425
RsaNI	GTAC	2 cut(s)	628, 1424
RseI	CAYNNNNRTG	4 cut(s)	233, 273, 1367, 1412
SapI	GCTCTTC	1 cut(s)	567
SatI	GCNGC	6 cut(s)	39, 705, 1215, 1352, 1397, 1727
Sau3AI	GATC	5 cut(s)	425, 696, 1519, 1692, 1744
SchI	GAGTC	3 cut(s)	385, 479, 1015
ScrFI	CCNGG	8 cut(s)	189, 618, 672, 816, 881, 901, 1629, 1700
SduI	GDGCHC	1 cut(s)	954
SfaNI	GCATC	1 cut(s)	757
SfcI	CTRYAG	1 cut(s)	1427
SinI	GGWCC	9 cut(s)	191, 311, 440, 502, 578, 1193, 1531, 1555, 1706
SmiMI	CAYNNNNRTG	4 cut(s)	233, 273, 1367, 1412
SphI	GCATGC	1 cut(s)	407
SsiI	CCGC	6 cut(s)	705, 1104, 1352, 1604, 1709, 1736
SspI	AATATT	1 cut(s)	121
SspMI	CTAG	5 cut(s)	141, 195, 914, 1325, 1437
StyD4I	CCNGG	8 cut(s)	187, 616, 670, 814, 879, 899, 1627, 1698
StyI	CCWWGG	3 cut(s)	194, 376, 1189
TaaI	ACNGT	6 cut(s)	611, 635, 754, 1123, 1478, 1649
TaiI	ACGT	4 cut(s)	324, 414, 834, 1113
TaqI	TCGA	2 cut(s)	942, 1563
TatI	WGTACW	1 cut(s)	627
TauI	GCSGC	2 cut(s)	707, 1354
TfiI	GAWTC	2 cut(s)	936, 1717
TscAI	CASTG	2 cut(s)	275, 1652
TseFI	GTSAC	5 cut(s)	136, 215, 259, 1327, 1360
TseI	GCWGC	4 cut(s)	38, 1214, 1396, 1726
Tsp45I	GTSAC	5 cut(s)	136, 215, 259, 1327, 1360
TspDTI	ATGAA	2 cut(s)	192, 627
TspGWI	ACGGA	1 cut(s)	1067
TspRI	CASTG	2 cut(s)	275, 1652
Tth111I	GACNNNGTC	1 cut(s)	221
Van91I	CCANNNNNTGG	2 cut(s)	270, 1123
VpaK11BI	GGWCC	9 cut(s)	191, 311, 440, 502, 578, 1193, 1531, 1555, 1706
VspI	ATTAAT	1 cut(s)	552
XapI	RAATTY	6 cut(s)	182, 1073, 1097, 1133, 1177, 1208
XceI	RCATGY	1 cut(s)	407
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1196
XmaJI	CCTAGG	1 cut(s)	194
XmiI	GTMKAC	2 cut(s)	534, 774
XspI	CTAG	5 cut(s)	141, 195, 914, 1325, 1437

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.