Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0003501

Physical Location & Seq

Genomic Coordinates Reverse (-)

10968992 .. 10972044

Gene Structure 3053 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG127200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1653 bp

ATGGGTTATCTTCGTTTTCCGTCAATGGCGGCATTGCTCTTTTGCTTTTGTGTTGCAGTAGCTCTAATGCCAGAGTTTGCTGAAGGCAGAACAAGACACTACACTTTCAATATTAAGTACCACAATGTCACAAGGTTGTGCAGTACAAGGAGGATCATAAGTGTGAATGGAAAATTGCCAGGACCAAGACTAGTGGCAAGGGAAGGTGATCAAGTTCTCATTAAAGTGGTGAACCGGATCAAAGAGAATGTTACCATTCACTGGCATGGAATTAGGCAACTTAGAAGTGGTTGGGCAGATGGTCCGGCTTACATTACACAGTGTCCTATCCAATCTGGCCAGTCATACATTTACAACTTCACCATCACAGGCCAGAGAGGAACTCTGTTGTATCATGCTCACATTTCATGGTTGAGAGCTACCCTTTATGGACCCATCATCATTCTCCCAAGAAGAAATGAGTCTTACCCTTTTGTGAAACCCTACAAGCAAATCCCCATTATTCTTGGAGAGTGGTTTAAAGCAGACCCTGAGGCTGTGATTAGCCAGGCTCTTCAGACTGGAGCAGGACCTAATGTTTCGGATGCGTACACTCTGAATGGGCTTCCAGGCCCCACGTACAACTGTTCATCTAATGATGTATTCAAGCTAAAGGTGAAACCTGGGAAGACATACCTCCTCCGATTGATCAACGCTGCACTCAACGACGAGCTATTCATCAGTATAGCCAATCATTCCCTAACCGTGGTGGATGTCGATGCTTCTTATGTCAAACCTTTCAACACTGACATACTTCTCATCGCCCCTGGCCAAACCACAAACGTCCTCCTCACAACCAAGCCCAATTTCCCCAATGCCACTTTCCTCATCCTCACGAGCCCCTACTTCACCGGTGCTGGCACCCTCGACAACACCACCGCTGCTGGAATCCTTGAATATGAGAACCCACTAAGTAGTACTAGTACTCCCTCTCCCATCAAAACTCTTCCCCTCCTCAAACCAAGCCTTCCACCCATCAATGCCACCAAGTTTGTCAATGTAACCCAGTTTGTCCAAAACTTGGCCAGCAAGTATCGTAGCTTGGCCAGTACTAAATTCCCAGCCAATGTCCCCCAAACAGTGGACAGGAAGTTTTTCTTCACCGTAGGACTTGGAACAAGCCCATGCCCCAAAAACACGACATGCCAAGGACCGAATGGCCAAAAGTTTGCTGCGTCGATTAACAATGTATCATTTGCTCTTCCATCAGTTGCCATGCTTCAGTCACATTTCTTTGGACAGTCCAATGTGACTTACAGAACTGATTTTCCTAGCAAGCCAGTTGTGCAATTTAACTACACAGGAACTGCACCAAATAACACTAATGTGAGCAATGCAACAAGGGCAGTGGTGTTACCATTCAACACAACTGTGGAGGTGGTGTTGCAAGACACAAGCATTATTGGTGCGGAGAGCCACCCACTTCATCTTCATGGGTTCAATTTCTTTGTTGTTGGACAAGGTTTTGGAAACTTTGATCAGAACAAAGATCCTGCAAAGTTCAATCTGGTGGACCCTGTTGAGAGGAACACTATAGGTGTTCCGGCCGGTGGTTGGGTTGCCATTCGTTTCTTGGCAGACAATCCAGGTATGGCTAATTACATGACATATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0016491 GO:0016722 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044550 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

550

Amino Acids

60.48

Weight (kDa)

9.44

Isoelectric Point (pI)

31.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	38 - 152	5.9e-42	Multicopper oxidase
Cu-oxidase	PF00394	164 - 315	2.9e-42	Multicopper oxidase
Cu-oxidase_2	PF07731	436 - 546	1.5e-30	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003501)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G29130
fragaria_vesca	FvH4_6g13430
malus_domestica	MD03G1087400.v1.1 MD04G1131200.v1.1 MD11G1096500.v1.1 MD12G1144300.v1.1
prunus_persica	Prupe.6G072100_v2.0.a1 Prupe.6G257700_v2.0.a1
pyrus_communis	pycom03g06930 pycom04g11940 pycom11g08180 pycom12g13880
rosa_chinensis	RchiOBHm_Chr3g0466301 RchiOBHm_Chr3g0466311 RchiOBHm_Chr5g0065931
rosa_laevigata	RLG00000024588 RLG00000035828
rosa_multiflora	Rmu_co8069514.1_g000001 Rmu_co8514891.1_g000001 Rmu_sc0000350.1_g000021 Rmu_sc0003480.1_g000018 Rmu_sc0005869.1_g000003
rosa_roxburghii	Rroxscaffold_1G00015240 Rroxscaffold_6G00414620
rosa_rugosa	Rorug03G0080800 Rorug05G0375600
rosa_samantha	Rh3AG127200 Rh3BG148500 Rh3DG149200 Rh5AG433600 Rh5BG450200 Rh5CG472500 Rh5DG463600
rosa_wichuraiana	Rw3G012010 Rw5G040650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	899
AccB7I	CCANNNNNTGG	3 cut(s)	261, 1060, 1120
AciI	CCGC	3 cut(s)	29, 918, 1448
AclWI	GGATC	3 cut(s)	161, 245, 1523
AcoI	YGGCCR	6 cut(s)	337, 808, 1062, 1083, 1198, 1584
AcsI	RAATTY	1 cut(s)	1094
AcuI	CTGAAG	3 cut(s)	102, 539, 1244
AfaI	GTAC	7 cut(s)	119, 145, 590, 620, 958, 964, 1090
AfiI	CCNNNNNNNGG	6 cut(s)	261, 745, 1060, 1120, 1589, 1593
AgeI	ACCGGT	1 cut(s)	890
AgsI	TTSAA	7 cut(s)	109, 646, 781, 935, 1402, 1480, 1543
AhlI	ACTAGT	2 cut(s)	190, 959
AjnI	CCWGG	6 cut(s)	178, 546, 607, 661, 805, 1624
AjuI	GAANNNNNNNTTGG	4 cut(s)	830, 845, 862, 877
AleI	CACNNNNGTG	2 cut(s)	1364, 1409
AloI	GAACNNNNNNTCC	2 cut(s)	1291, 1323
AluBI	AGCT	5 cut(s)	62, 419, 649, 712, 1080
AluI	AGCT	5 cut(s)	62, 419, 649, 712, 1080
AlwI	GGATC	3 cut(s)	161, 245, 1523
AlwNI	CAGNNNCTG	2 cut(s)	530, 1346
AoxI	GGCC	8 cut(s)	337, 370, 610, 808, 1062, 1083, 1198, 1584
ApeKI	GCWGC	3 cut(s)	695, 920, 1211
ApoI	RAATTY	1 cut(s)	1094
AsiGI	ACCGGT	1 cut(s)	890
Asp700I	GAANNNNTTC	1 cut(s)	1133
AspS9I	GGNCC	7 cut(s)	182, 302, 431, 569, 611, 1190, 1552
AsuHPI	GGTGA	6 cut(s)	218, 241, 352, 667, 880, 1132
AvaII	GGWCC	6 cut(s)	182, 302, 431, 569, 1190, 1552
AxyI	CCTNAGG	1 cut(s)	531
BalI	TGGCCA	5 cut(s)	339, 810, 1064, 1085, 1200
BanI	GGYRCC	1 cut(s)	899
BanII	GRGCYC	1 cut(s)	881
BauI	CACGAG	1 cut(s)	874
BbsI	GAAGAC	1 cut(s)	674
BbvI	GCAGC	3 cut(s)	682, 907, 1198
BccI	CCATC	6 cut(s)	293, 371, 443, 983, 1022, 1252
BciT130I	CCWGG	6 cut(s)	180, 548, 609, 663, 807, 1626
BclI	TGATCA	3 cut(s)	208, 687, 1516
BcuI	ACTAGT	2 cut(s)	190, 959
BfaI	CTAG	3 cut(s)	191, 960, 1311
BfmI	CTRYAG	1 cut(s)	1572
BisI	GCNGC	4 cut(s)	30, 696, 921, 1212
BlsI	GCNGC	4 cut(s)	31, 697, 922, 1213
BmcAI	AGTACT	3 cut(s)	958, 964, 1090
Bme1390I	CCNGG	6 cut(s)	180, 548, 609, 663, 807, 1626
Bme18I	GGWCC	6 cut(s)	182, 302, 431, 569, 1190, 1552
BmgT120I	GGNCC	7 cut(s)	182, 302, 431, 569, 611, 1190, 1552
BmiI	GGNNCC	4 cut(s)	433, 613, 901, 1554
BmrFI	CCNGG	6 cut(s)	180, 548, 609, 663, 807, 1626
BmrI	ACTGGG	1 cut(s)	1039
BmsI	GCATC	2 cut(s)	574, 748
BmuI	ACTGGG	1 cut(s)	1039
BpiI	GAAGAC	1 cut(s)	674
BplI	GAGNNNNNCTC	2 cut(s)	367, 399
BpmI	CTGGAG	1 cut(s)	582
BsaAI	YACGTR	1 cut(s)	618
BsaJI	CCNNGG	4 cut(s)	662, 744, 805, 1186
BsaWI	WCCGGW	2 cut(s)	234, 890
BsaXI	ACNNNNNCTCC	6 cut(s)	949, 955, 979, 985, 1406, 1436
Bsc4I	CCNNNNNNNGG	6 cut(s)	261, 745, 1060, 1120, 1589, 1593
Bse118I	RCCGGY	2 cut(s)	890, 1586
Bse1I	ACTGG	6 cut(s)	266, 340, 565, 1045, 1086, 1319
Bse21I	CCTNAGG	1 cut(s)	531
Bse3DI	GCAATG	2 cut(s)	32, 1378
BseBI	CCWGG	6 cut(s)	180, 548, 609, 663, 807, 1626
BseDI	CCNNGG	4 cut(s)	662, 744, 805, 1186
BseGI	GGATG	3 cut(s)	589, 757, 867
BseLI	CCNNNNNNNGG	6 cut(s)	261, 745, 1060, 1120, 1589, 1593
BseMI	GCAATG	2 cut(s)	32, 1378
BseMII	CTCAG	1 cut(s)	522
BseNI	ACTGG	6 cut(s)	266, 340, 565, 1045, 1086, 1319
BseRI	GAGGAG	3 cut(s)	668, 818, 983
BseX3I	CGGCCG	1 cut(s)	1584
BseXI	GCAGC	3 cut(s)	682, 907, 1198
BseYI	CCCAGC	1 cut(s)	1099
BsgI	GTGCAG	3 cut(s)	160, 681, 1332
Bsh1285I	CGRYCG	1 cut(s)	1587
BshFI	GGCC	8 cut(s)	339, 372, 612, 810, 1064, 1085, 1200, 1586
BshNI	GGYRCC	1 cut(s)	899
BshTI	ACCGGT	1 cut(s)	890
BsiEI	CGRYCG	1 cut(s)	1587
BsiSI	CCGG	5 cut(s)	235, 305, 891, 1583, 1587
BslFI	GGGAC	1 cut(s)	1094
BslI	CCNNNNNNNGG	6 cut(s)	261, 745, 1060, 1120, 1589, 1593
BsmFI	GGGAC	1 cut(s)	1094
BsnI	GGCC	8 cut(s)	339, 372, 612, 810, 1064, 1085, 1200, 1586
Bsp1286I	GDGCHC	1 cut(s)	881
Bsp143I	GATC	6 cut(s)	153, 208, 237, 687, 1516, 1528
BspACI	CCGC	3 cut(s)	29, 918, 1448
BspANI	GGCC	8 cut(s)	339, 372, 612, 810, 1064, 1085, 1200, 1586
BspCNI	CTCAG	1 cut(s)	523
BspLI	GGNNCC	4 cut(s)	433, 613, 901, 1554
BspPI	GGATC	3 cut(s)	161, 245, 1523
BspQI	GCTCTTC	2 cut(s)	558, 1245
BspT107I	GGYRCC	1 cut(s)	899
BsrDI	GCAATG	2 cut(s)	32, 1378
BsrFI	RCCGGY	2 cut(s)	890, 1586
BsrI	ACTGG	6 cut(s)	266, 340, 565, 1045, 1086, 1319
BssAI	RCCGGY	2 cut(s)	890, 1586
BssECI	CCNNGG	4 cut(s)	662, 744, 805, 1186
BssMI	GATC	6 cut(s)	153, 208, 237, 687, 1516, 1528
BssSI	CACGAG	1 cut(s)	874
BssT1I	CCWWGG	1 cut(s)	1186
Bst2BI	CACGAG	1 cut(s)	874
Bst2UI	CCWGG	6 cut(s)	180, 548, 609, 663, 807, 1626
Bst4CI	ACNGT	7 cut(s)	321, 626, 745, 1120, 1144, 1281, 1411
Bst6I	CTCTTC	3 cut(s)	558, 990, 1245
BstBAI	YACGTR	1 cut(s)	618
BstC8I	GCNNGC	3 cut(s)	898, 1066, 1316
BstDEI	CTNAG	3 cut(s)	281, 531, 950
BstDSI	CCRYGG	1 cut(s)	744
BstF5I	GGATG	3 cut(s)	589, 757, 867
BstKTI	GATC	6 cut(s)	156, 211, 240, 690, 1519, 1531
BstMBI	GATC	6 cut(s)	153, 208, 237, 687, 1516, 1528
BstMCI	CGRYCG	1 cut(s)	1587
BstMWI	GCNNNNNNNGC	2 cut(s)	1324, 1382
BstNI	CCWGG	6 cut(s)	180, 548, 609, 663, 807, 1626
BstNSI	RCATGY	1 cut(s)	1185
BstSCI	CCNGG	6 cut(s)	178, 546, 607, 661, 805, 1624
BstSFI	CTRYAG	1 cut(s)	1572
BstV1I	GCAGC	3 cut(s)	682, 907, 1198
BstV2I	GAAGAC	1 cut(s)	674
BstX2I	RGATCY	1 cut(s)	1528
BstYI	RGATCY	1 cut(s)	1528
BstZI	CGGCCG	1 cut(s)	1584
Bsu36I	CCTNAGG	1 cut(s)	531
BsuRI	GGCC	8 cut(s)	339, 372, 612, 810, 1064, 1085, 1200, 1586
BtgI	CCRYGG	1 cut(s)	744
BtgZI	GCGATG	1 cut(s)	784
BtsCI	GGATG	3 cut(s)	589, 757, 867
BtsI	GCAGTG	1 cut(s)	1392
BtsIMutI	CAGTG	5 cut(s)	259, 326, 783, 1125, 1392
Cac8I	GCNNGC	3 cut(s)	898, 1066, 1316
CaiI	CAGNNNCTG	2 cut(s)	530, 1346
Cfr10I	RCCGGY	2 cut(s)	890, 1586
Cfr13I	GGNCC	7 cut(s)	182, 302, 431, 569, 611, 1190, 1552
CseI	GACGC	1 cut(s)	1203
Csp6I	GTAC	7 cut(s)	118, 144, 589, 619, 957, 963, 1089
CspAI	ACCGGT	1 cut(s)	890
CspCI	CAANNNNNGTGG	6 cut(s)	174, 209, 1012, 1047, 1368, 1403
CviAII	CATG	8 cut(s)	266, 395, 408, 1164, 1182, 1255, 1472, 1642
CviQI	GTAC	7 cut(s)	118, 144, 589, 619, 957, 963, 1089
DdeI	CTNAG	3 cut(s)	281, 531, 950
DpnI	GATC	6 cut(s)	155, 210, 239, 689, 1518, 1530
DpnII	GATC	6 cut(s)	153, 208, 237, 687, 1516, 1528
DraI	TTTAAA	1 cut(s)	520
EaeI	YGGCCR	6 cut(s)	337, 808, 1062, 1083, 1198, 1584
EagI	CGGCCG	1 cut(s)	1584
Eam1104I	CTCTTC	3 cut(s)	558, 990, 1245
EarI	CTCTTC	3 cut(s)	558, 990, 1245
EclXI	CGGCCG	1 cut(s)	1584
Eco130I	CCWWGG	1 cut(s)	1186
Eco24I	GRGCYC	1 cut(s)	881
Eco47I	GGWCC	6 cut(s)	182, 302, 431, 569, 1190, 1552
Eco52I	CGGCCG	1 cut(s)	1584
Eco57I	CTGAAG	3 cut(s)	102, 539, 1244
Eco81I	CCTNAGG	1 cut(s)	531
EcoO109I	RGGNCCY	2 cut(s)	569, 611
EcoRII	CCWGG	6 cut(s)	178, 546, 607, 661, 805, 1624
EcoT14I	CCWWGG	1 cut(s)	1186
EcoT38I	GRGCYC	1 cut(s)	881
ErhI	CCWWGG	1 cut(s)	1186
FaeI	CATG	8 cut(s)	269, 398, 411, 1167, 1185, 1258, 1475, 1645
FalI	AAGNNNNNCTT	2 cut(s)	1121, 1153
FaqI	GGGAC	1 cut(s)	1094
FatI	CATG	8 cut(s)	265, 394, 407, 1163, 1181, 1254, 1471, 1641
FbaI	TGATCA	3 cut(s)	208, 687, 1516
Fnu4HI	GCNGC	4 cut(s)	30, 696, 921, 1212
FokI	GGATG	3 cut(s)	596, 764, 854
FriOI	GRGCYC	1 cut(s)	881
Fsp4HI	GCNGC	4 cut(s)	30, 696, 921, 1212
FspBI	CTAG	3 cut(s)	191, 960, 1311
GluI	GCNGC	4 cut(s)	30, 696, 921, 1212
GsaI	CCCAGC	1 cut(s)	1103
GsuI	CTGGAG	1 cut(s)	582
HaeIII	GGCC	8 cut(s)	339, 372, 612, 810, 1064, 1085, 1200, 1586
HapII	CCGG	5 cut(s)	235, 305, 891, 1583, 1587
HgaI	GACGC	1 cut(s)	1203
Hin1II	CATG	8 cut(s)	269, 398, 411, 1167, 1185, 1258, 1475, 1645
HinfI	GANTC	2 cut(s)	461, 927
HpaII	CCGG	5 cut(s)	235, 305, 891, 1583, 1587
HphI	GGTGA	6 cut(s)	218, 241, 352, 667, 880, 1132
Hpy166II	GTNNAC	4 cut(s)	232, 591, 1123, 1552
Hpy188I	TCNGA	5 cut(s)	558, 583, 597, 683, 1521
Hpy188III	TCNNGA	1 cut(s)	874
Hpy8I	GTNNAC	4 cut(s)	232, 591, 1123, 1552
Hpy99I	CGWCG	2 cut(s)	710, 1219
HpyAV	CCTTC	3 cut(s)	77, 197, 1016
HpyCH4III	ACNGT	7 cut(s)	321, 626, 745, 1120, 1144, 1281, 1411
HpyCH4IV	ACGT	2 cut(s)	617, 822
HpyCH4V	TGCA	8 cut(s)	56, 141, 698, 1327, 1349, 1376, 1426, 1535
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1324, 1382
HpyF3I	CTNAG	3 cut(s)	281, 531, 950
HpySE526I	ACGT	2 cut(s)	617, 822
Hsp92II	CATG	8 cut(s)	269, 398, 411, 1167, 1185, 1258, 1475, 1645
Ksp22I	TGATCA	3 cut(s)	208, 687, 1516
Kzo9I	GATC	6 cut(s)	153, 208, 237, 687, 1516, 1528
LguI	GCTCTTC	2 cut(s)	558, 1245
LmnI	GCTCC	1 cut(s)	563
Lsp1109I	GCAGC	3 cut(s)	682, 907, 1198
LweI	GCATC	2 cut(s)	574, 748
MaeI	CTAG	3 cut(s)	191, 960, 1311
MaeII	ACGT	2 cut(s)	617, 822
MaeIII	GTNAC	6 cut(s)	127, 250, 1039, 1263, 1288, 1392
MalI	GATC	6 cut(s)	155, 210, 239, 689, 1518, 1530
MboI	GATC	6 cut(s)	153, 208, 237, 687, 1516, 1528
MboII	GAAGA	7 cut(s)	465, 545, 679, 977, 1129, 1232, 1460
MflI	RGATCY	1 cut(s)	1528
MhlI	GDGCHC	1 cut(s)	881
MlsI	TGGCCA	5 cut(s)	339, 810, 1064, 1085, 1200
MluCI	AATT	7 cut(s)	173, 270, 844, 1094, 1328, 1480, 1636
MluNI	TGGCCA	5 cut(s)	339, 810, 1064, 1085, 1200
MlyI	GAGTC	1 cut(s)	470
MmeI	TCCRAC	1 cut(s)	1474
Mox20I	TGGCCA	5 cut(s)	339, 810, 1064, 1085, 1200
MroXI	GAANNNNTTC	1 cut(s)	1133
MscI	TGGCCA	5 cut(s)	339, 810, 1064, 1085, 1200
MseI	TTAA	6 cut(s)	114, 222, 519, 1221, 1332, 1651
MslI	CAYNNNNRTG	6 cut(s)	161, 224, 264, 1364, 1409, 1470
Msp20I	TGGCCA	5 cut(s)	339, 810, 1064, 1085, 1200
MspA1I	CMGCKG	1 cut(s)	920
MspI	CCGG	5 cut(s)	235, 305, 891, 1583, 1587
MspR9I	CCNGG	6 cut(s)	180, 548, 609, 663, 807, 1626
MvaI	CCWGG	6 cut(s)	180, 548, 609, 663, 807, 1626
MwoI	GCNNNNNNNGC	2 cut(s)	1324, 1382
NdeII	GATC	6 cut(s)	153, 208, 237, 687, 1516, 1528
NlaIII	CATG	8 cut(s)	269, 398, 411, 1167, 1185, 1258, 1475, 1645
NlaIV	GGNNCC	4 cut(s)	433, 613, 901, 1554
NmuCI	GTSAC	3 cut(s)	127, 1263, 1288
NspI	RCATGY	1 cut(s)	1185
OliI	CACNNNNGTG	2 cut(s)	1364, 1409
PciSI	GCTCTTC	2 cut(s)	558, 1245
PdmI	GAANNNNTTC	1 cut(s)	1133
PfeI	GAWTC	1 cut(s)	927
PflMI	CCANNNNNTGG	3 cut(s)	261, 1060, 1120
PinAI	ACCGGT	1 cut(s)	890
PkrI	GCNGC	4 cut(s)	31, 697, 922, 1213
PleI	GAGTC	1 cut(s)	469
PpsI	GAGTC	1 cut(s)	469
Ppu21I	YACGTR	1 cut(s)	618
PpuMI	RGGWCCY	1 cut(s)	569
Psp5II	RGGWCCY	1 cut(s)	569
Psp6I	CCWGG	6 cut(s)	178, 546, 607, 661, 805, 1624
PspFI	CCCAGC	1 cut(s)	1099
PspGI	CCWGG	6 cut(s)	178, 546, 607, 661, 805, 1624
PspN4I	GGNNCC	4 cut(s)	433, 613, 901, 1554
PspPI	GGNCC	7 cut(s)	182, 302, 431, 569, 611, 1190, 1552
PspPPI	RGGWCCY	1 cut(s)	569
PstNI	CAGNNNCTG	2 cut(s)	530, 1346
PsuI	RGATCY	1 cut(s)	1528
RsaI	GTAC	7 cut(s)	119, 145, 590, 620, 958, 964, 1090
RsaNI	GTAC	7 cut(s)	118, 144, 589, 619, 957, 963, 1089
RseI	CAYNNNNRTG	6 cut(s)	161, 224, 264, 1364, 1409, 1470
SapI	GCTCTTC	2 cut(s)	558, 1245
SaqAI	TTAA	6 cut(s)	114, 222, 519, 1221, 1332, 1651
SatI	GCNGC	4 cut(s)	30, 696, 921, 1212
Sau3AI	GATC	6 cut(s)	153, 208, 237, 687, 1516, 1528
Sau96I	GGNCC	7 cut(s)	182, 302, 431, 569, 611, 1190, 1552
ScaI	AGTACT	3 cut(s)	958, 964, 1090
SchI	GAGTC	1 cut(s)	470
ScrFI	CCNGG	6 cut(s)	180, 548, 609, 663, 807, 1626
SduI	GDGCHC	1 cut(s)	881
SfaNI	GCATC	2 cut(s)	574, 748
SfcI	CTRYAG	1 cut(s)	1572
SgrAI	CRCCGGYG	1 cut(s)	890
SinI	GGWCC	6 cut(s)	182, 302, 431, 569, 1190, 1552
SmiMI	CAYNNNNRTG	6 cut(s)	161, 224, 264, 1364, 1409, 1470
SpeI	ACTAGT	2 cut(s)	190, 959
Sse9I	AATT	7 cut(s)	173, 270, 844, 1094, 1328, 1480, 1636
SsiI	CCGC	3 cut(s)	29, 918, 1448
SspI	AATATT	1 cut(s)	112
SspMI	CTAG	3 cut(s)	191, 960, 1311
StyD4I	CCNGG	6 cut(s)	178, 546, 607, 661, 805, 1624
StyI	CCWWGG	1 cut(s)	1186
TaaI	ACNGT	7 cut(s)	321, 626, 745, 1120, 1144, 1281, 1411
TaiI	ACGT	2 cut(s)	620, 825
TaqI	TCGA	3 cut(s)	756, 906, 1217
TaqII	GACCGA	1 cut(s)	1207
TasI	AATT	7 cut(s)	173, 270, 844, 1094, 1328, 1480, 1636
TatI	WGTACW	4 cut(s)	143, 956, 962, 1088
TauI	GCSGC	1 cut(s)	32
TfiI	GAWTC	1 cut(s)	927
Tru1I	TTAA	6 cut(s)	114, 222, 519, 1221, 1332, 1651
Tru9I	TTAA	6 cut(s)	114, 222, 519, 1221, 1332, 1651
TscAI	CASTG	5 cut(s)	266, 326, 790, 1125, 1392
TseFI	GTSAC	3 cut(s)	127, 1263, 1288
TseI	GCWGC	3 cut(s)	695, 920, 1211
Tsp45I	GTSAC	3 cut(s)	127, 1263, 1288
TspDTI	ATGAA	5 cut(s)	396, 618, 706, 1454, 1460
TspGWI	ACGGA	1 cut(s)	9
TspRI	CASTG	5 cut(s)	266, 326, 790, 1125, 1392
Van91I	CCANNNNNTGG	3 cut(s)	261, 1060, 1120
VpaK11BI	GGWCC	6 cut(s)	182, 302, 431, 569, 1190, 1552
XapI	RAATTY	1 cut(s)	1094
XceI	RCATGY	1 cut(s)	1185
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1193, 1609
XmnI	GAANNNNTTC	1 cut(s)	1133
XspI	CTAG	3 cut(s)	191, 960, 1311
ZrmI	AGTACT	3 cut(s)	958, 964, 1090

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.