Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0003501

Physical Location & Seq

Genomic Coordinates Forward (+)

19003224 .. 19005910

Gene Structure 2687 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00015240.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1623 bp

ATGGGGGCAGCTGGTTTTCTTTTTTATTCACCAACATTTGTAGTGGCTTTTTTCCTCGCTCTGAGCTCTCTCTGGGTCGATTTCCCTCGTGTTTCTACAGGAAATGGTCCGGTTACAAGGCACTACGAATTTGATATAATTTTAAAAAATGTGACTCGGTTGTGCCGTACAAAAAGTATTGTGACAGTGAATGGAAAGTTCCCAGGGCCTCGCATTGTTGCTAGAGAGGGAGACAGGGTTTTGTTGACGGTGGTCAATCATGTTCCAAACAACATCAGTCTACATTGGCATGGTATAAGACAACTCCAAAGTGGCTGGGCAGATGGGCCATCATATATAACTCAGTGCCCTATTCAAACTAACCAGAGTTATGTCTACAACTTTACCATCACTGGCCAGAGAGGAACTTTGTTCTGGCATGCTCATATCTCATGGCTAAGAGCTACTCTCTATGGACCCCTCATCATCCTCCCTAAGCACAATGATTCCTATCCTTTTGCCAAACCCCATGAAGAAGTTCCTATCATGTTTGGCGAGTGGTGGAATGTTGATCCTGAGGCTGTAATTAGCGAGGCTCTTCGAACTGGAAATGGTCCAAATGTTTCTGATGCGTACACGATTAATGGCCTTCCAGGGCCATTGTACAATTGTTCCAGAAAAGACACTTTCAGGTTAAAGGTTGAACCAGGAAAGACATACCTCTTGCGTTTAATCAATGCTGCGGTCAATGATGAACTCTTTTTCAGCATAGCAAATCATACCCTTACCACAATTGAAGCCGATGCCGTCTATGTAAAACCATTCAAGACCAATGTCTTACTCATTGCACCTGGACAAACCACCAGTGTGCTTCTCAAGACAAAACAACACTACCCCAATGCCACTTTCCTCATGTTAGCCAGACCCTATTTCACCGGCATGGGCACTTTCAACAACTCCACCGTGGCTGGAATTCTCGAATACTCTACAACCCTCTCAAGTCCCTCTTCTTCAATTCCAGTAAGAAACCGTCCACTTTTTAGGCCTGTCCTTCCCCGAATAGGAGATACTTTGTTTGTCGCAAATTTTAATAGTAAATTCCGGAGTCTGGCGAGTGCTAAATTTCCAGCAAAGGTGCCCCAAACTGTTGAAAAACGGTTCTTTTTCACAGTGGGCCAAGGAACCATCCCATGCCCCAAAAACCAAACATGCCAAGGGCCGAATAACCGAACCAAGTTTGCAGCTTCTTTTAATAACATTTCCTTTGTTCTTCCTTCGATAGCACTACTCCAAACCCATTTCTTTGGCCAATATAGTGAAGTTTACTCCACTGACTTTCCTACCTTTCCTCTCCATCCATTTAACTACACTGGCACTCCACCAAACAACACCAATGTGAGGAATGGCACAAAGGTTGTGGTTCTGCCCTTCAATACTAGTGTGGAACTAGTGATGCAAGACACTAGCATTTTGGGGTGTGAAAGCCATCCTCTCCATCTCCATGGCTTCAATTTTTTTGTTGTTGGACAAGGTTTTGGGAACTTTGATGCCAATAGAGACCCTTCTAGCTTTAACATTGTCAATCCCGTTGAAAGAAACACAGTTGGAGTGCCCTCCGGGGTTGGGTGGCAATTCGATTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0006950 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009628 GO:0010035 GO:0016491 GO:0016722 GO:0042221 GO:0050896 GO:0055114 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

540

Amino Acids

60.18

Weight (kDa)

9.36

Isoelectric Point (pI)

32.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	49 - 159	8.3e-41	Multicopper oxidase
Cu-oxidase	PF00394	171 - 323	9.2e-44	Multicopper oxidase
Cu-oxidase_2	PF07731	450 - 533	2.8e-20	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003501)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G29130
fragaria_vesca	FvH4_6g13430
malus_domestica	MD03G1087400.v1.1 MD04G1131200.v1.1 MD11G1096500.v1.1 MD12G1144300.v1.1
prunus_persica	Prupe.6G072100_v2.0.a1 Prupe.6G257700_v2.0.a1
pyrus_communis	pycom03g06930 pycom04g11940 pycom11g08180 pycom12g13880
rosa_chinensis	RchiOBHm_Chr3g0466301 RchiOBHm_Chr3g0466311 RchiOBHm_Chr5g0065931
rosa_laevigata	RLG00000024588 RLG00000035828
rosa_multiflora	Rmu_co8069514.1_g000001 Rmu_co8514891.1_g000001 Rmu_sc0000350.1_g000021 Rmu_sc0003480.1_g000018 Rmu_sc0005869.1_g000003
rosa_roxburghii	Rroxscaffold_1G00015240 Rroxscaffold_6G00414620
rosa_rugosa	Rorug03G0080800 Rorug05G0375600
rosa_samantha	Rh3AG127200 Rh3BG148500 Rh3DG149200 Rh5AG433600 Rh5BG450200 Rh5CG472500 Rh5DG463600
rosa_wichuraiana	Rw3G012010 Rw5G040650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1114
AccI	GTMKAC	2 cut(s)	280, 375
AccIII	TCCGGA	1 cut(s)	1080
AciI	CCGC	1 cut(s)	722
AclWI	GGATC	1 cut(s)	545
AcoI	YGGCCR	2 cut(s)	394, 1285
AcsI	RAATTY	5 cut(s)	128, 951, 1063, 1076, 1100
AfaI	GTAC	3 cut(s)	169, 614, 644
AfiI	CCNNNNNNNGG	4 cut(s)	1040, 1087, 1377, 1602
AhlI	ACTAGT	2 cut(s)	1415, 1426
AjnI	CCWGG	4 cut(s)	202, 631, 685, 829
AjuI	GAANNNNNNNTTGG	2 cut(s)	869, 901
AleI	CACNNNNGTG	2 cut(s)	845, 1373
AluBI	AGCT	5 cut(s)	11, 66, 443, 1223, 1548
AluI	AGCT	5 cut(s)	11, 66, 443, 1223, 1548
Alw21I	GWGCWC	1 cut(s)	68
Alw26I	GTCTC	2 cut(s)	225, 1530
AlwI	GGATC	1 cut(s)	545
Aor13HI	TCCGGA	1 cut(s)	1080
AoxI	GGCC	9 cut(s)	206, 326, 394, 625, 635, 1022, 1153, 1196, 1285
ApeKI	GCWGC	3 cut(s)	8, 719, 1220
ApoI	RAATTY	5 cut(s)	128, 951, 1063, 1076, 1100
AseI	ATTAAT	1 cut(s)	621
Asp700I	GAANNNNTTC	1 cut(s)	516
AspS9I	GGNCC	8 cut(s)	107, 206, 326, 455, 593, 635, 1153, 1196
AsuC2I	CCSGG	1 cut(s)	1597
AsuHPI	GGTGA	2 cut(s)	21, 904
AsuII	TTCGAA	1 cut(s)	580
AvaII	GGWCC	3 cut(s)	107, 455, 593
AxyI	CCTNAGG	1 cut(s)	555
BaeGI	GKGCMC	4 cut(s)	350, 926, 1119, 1593
BalI	TGGCCA	2 cut(s)	396, 1287
BanI	GGYRCC	1 cut(s)	1114
BanII	GRGCYC	1 cut(s)	68
BauI	CACGAG	1 cut(s)	87
Bbv12I	GWGCWC	1 cut(s)	68
BbvI	GCAGC	3 cut(s)	20, 706, 1232
BccI	CCATC	7 cut(s)	317, 337, 395, 1172, 1341, 1473, 1482
BceAI	ACGGC	2 cut(s)	150, 770
BciT130I	CCWGG	4 cut(s)	204, 633, 687, 831
BcnI	CCSGG	1 cut(s)	1597
BcoDI	GTCTC	2 cut(s)	225, 1530
BcuI	ACTAGT	2 cut(s)	1415, 1426
BfaI	CTAG	6 cut(s)	222, 1416, 1427, 1443, 1545, 1621
BfmI	CTRYAG	1 cut(s)	96
BisI	GCNGC	3 cut(s)	9, 720, 1221
BlsI	GCNGC	3 cut(s)	10, 721, 1222
Bme1390I	CCNGG	5 cut(s)	204, 633, 687, 831, 1597
Bme18I	GGWCC	3 cut(s)	107, 455, 593
BmgT120I	GGNCC	8 cut(s)	107, 206, 326, 455, 593, 635, 1153, 1196
BmiI	GGNNCC	3 cut(s)	457, 1116, 1162
BmrFI	CCNGG	5 cut(s)	204, 633, 687, 831, 1597
BmsI	GCATC	4 cut(s)	598, 772, 1422, 1516
BoxI	GACNNNNGTC	2 cut(s)	251, 812
BplI	GAGNNNNNCTC	2 cut(s)	432, 464
Bpu10I	CCTNAGC	1 cut(s)	474
Bpu14I	TTCGAA	1 cut(s)	580
BpuEI	CTTGAG	2 cut(s)	839, 961
BpuMI	CCSGG	1 cut(s)	1597
BsaBI	GATNNNNATC	1 cut(s)	489
BsaI	GGTCTC	1 cut(s)	1530
BsaJI	CCNNGG	8 cut(s)	202, 203, 632, 942, 1156, 1192, 1480, 1596
BsaWI	WCCGGW	2 cut(s)	109, 1080
BsaXI	ACNNNNNCTCC	4 cut(s)	222, 252, 1339, 1369
Bsc4I	CCNNNNNNNGG	4 cut(s)	1040, 1087, 1377, 1602
Bse118I	RCCGGY	1 cut(s)	914
Bse1I	ACTGG	5 cut(s)	397, 589, 843, 998, 1354
Bse21I	CCTNAGG	1 cut(s)	555
Bse3DI	GCAATG	1 cut(s)	822
Bse8I	GATNNNNATC	1 cut(s)	489
BseAI	TCCGGA	1 cut(s)	1080
BseBI	CCWGG	4 cut(s)	204, 633, 687, 831
BseDI	CCNNGG	8 cut(s)	202, 203, 632, 942, 1156, 1192, 1480, 1596
BseGI	GGATG	4 cut(s)	465, 1164, 1333, 1465
BseJI	GATNNNNATC	1 cut(s)	489
BseLI	CCNNNNNNNGG	4 cut(s)	1040, 1087, 1377, 1602
BseMI	GCAATG	1 cut(s)	822
BseMII	CTCAG	3 cut(s)	53, 356, 546
BseNI	ACTGG	5 cut(s)	397, 589, 843, 998, 1354
BseSI	GKGCMC	4 cut(s)	350, 926, 1119, 1593
BseXI	GCAGC	3 cut(s)	20, 706, 1232
BseYI	CCCAGC	1 cut(s)	315
BshFI	GGCC	9 cut(s)	208, 328, 396, 627, 637, 1024, 1155, 1198, 1287
BshNI	GGYRCC	1 cut(s)	1114
BsiHKAI	GWGCWC	1 cut(s)	68
BsiSI	CCGG	4 cut(s)	110, 915, 1081, 1596
BslFI	GGGAC	1 cut(s)	966
BslI	CCNNNNNNNGG	4 cut(s)	1040, 1087, 1377, 1602
BsmAI	GTCTC	2 cut(s)	225, 1530
BsmFI	GGGAC	1 cut(s)	966
BsnI	GGCC	9 cut(s)	208, 328, 396, 627, 637, 1024, 1155, 1198, 1287
Bso31I	GGTCTC	1 cut(s)	1530
Bsp119I	TTCGAA	1 cut(s)	580
Bsp1286I	GDGCHC	5 cut(s)	68, 350, 926, 1119, 1593
Bsp13I	TCCGGA	1 cut(s)	1080
Bsp1407I	TGTACA	1 cut(s)	642
Bsp143I	GATC	1 cut(s)	550
Bsp19I	CCATGG	1 cut(s)	1480
BspACI	CCGC	1 cut(s)	722
BspANI	GGCC	9 cut(s)	208, 328, 396, 627, 637, 1024, 1155, 1198, 1287
BspCNI	CTCAG	3 cut(s)	54, 355, 547
BspEI	TCCGGA	1 cut(s)	1080
BspLI	GGNNCC	3 cut(s)	457, 1116, 1162
BspPI	GGATC	1 cut(s)	545
BspQI	GCTCTTC	1 cut(s)	582
BspT104I	TTCGAA	1 cut(s)	580
BspT107I	GGYRCC	1 cut(s)	1114
BspTNI	GGTCTC	1 cut(s)	1530
BsrDI	GCAATG	1 cut(s)	822
BsrFI	RCCGGY	1 cut(s)	914
BsrGI	TGTACA	1 cut(s)	642
BsrI	ACTGG	5 cut(s)	397, 589, 843, 998, 1354
BssAI	RCCGGY	1 cut(s)	914
BssECI	CCNNGG	8 cut(s)	202, 203, 632, 942, 1156, 1192, 1480, 1596
BssMI	GATC	1 cut(s)	550
BssSI	CACGAG	1 cut(s)	87
BssT1I	CCWWGG	3 cut(s)	1156, 1192, 1480
Bst2BI	CACGAG	1 cut(s)	87
Bst2UI	CCWGG	4 cut(s)	204, 633, 687, 831
Bst4CI	ACNGT	8 cut(s)	187, 250, 943, 1010, 1126, 1137, 1150, 1582
Bst6I	CTCTTC	2 cut(s)	582, 991
BstAUI	TGTACA	1 cut(s)	642
BstBI	TTCGAA	1 cut(s)	580
BstC8I	GCNNGC	1 cut(s)	420
BstDEI	CTNAG	5 cut(s)	62, 342, 437, 474, 555
BstDSI	CCRYGG	2 cut(s)	942, 1480
BstF5I	GGATG	4 cut(s)	465, 1164, 1333, 1465
BstKTI	GATC	1 cut(s)	553
BstMAI	GTCTC	2 cut(s)	225, 1530
BstMBI	GATC	1 cut(s)	550
BstNI	CCWGG	4 cut(s)	204, 633, 687, 831
BstNSI	RCATGY	2 cut(s)	422, 1191
BstPAI	GACNNNNGTC	2 cut(s)	251, 812
BstSCI	CCNGG	5 cut(s)	202, 631, 685, 829, 1595
BstSFI	CTRYAG	1 cut(s)	96
BstSLI	GKGCMC	4 cut(s)	350, 926, 1119, 1593
BstV1I	GCAGC	3 cut(s)	20, 706, 1232
BstXI	CCANNNNNNTGG	2 cut(s)	1283, 1481
Bsu36I	CCTNAGG	1 cut(s)	555
BsuRI	GGCC	9 cut(s)	208, 328, 396, 627, 637, 1024, 1155, 1198, 1287
BtgI	CCRYGG	2 cut(s)	942, 1480
BtsCI	GGATG	4 cut(s)	465, 1164, 1333, 1465
BtsIMutI	CAGTG	7 cut(s)	192, 350, 390, 850, 1155, 1308, 1347
Cac8I	GCNNGC	1 cut(s)	420
Cfr10I	RCCGGY	1 cut(s)	914
Cfr13I	GGNCC	8 cut(s)	107, 206, 326, 455, 593, 635, 1153, 1196
Csp6I	GTAC	3 cut(s)	168, 613, 643
CspCI	CAANNNNNGTGG	2 cut(s)	1377, 1412
CviQI	GTAC	3 cut(s)	168, 613, 643
DdeI	CTNAG	5 cut(s)	62, 342, 437, 474, 555
DpnI	GATC	1 cut(s)	552
DpnII	GATC	1 cut(s)	550
DraI	TTTAAA	1 cut(s)	144
EaeI	YGGCCR	2 cut(s)	394, 1285
Eam1104I	CTCTTC	2 cut(s)	582, 991
EarI	CTCTTC	2 cut(s)	582, 991
Ecl136II	GAGCTC	1 cut(s)	66
Eco130I	CCWWGG	3 cut(s)	1156, 1192, 1480
Eco147I	AGGCCT	1 cut(s)	1024
Eco24I	GRGCYC	1 cut(s)	68
Eco31I	GGTCTC	1 cut(s)	1530
Eco47I	GGWCC	3 cut(s)	107, 455, 593
Eco53kI	GAGCTC	1 cut(s)	66
Eco81I	CCTNAGG	1 cut(s)	555
EcoICRI	GAGCTC	1 cut(s)	66
EcoO109I	RGGNCCY	1 cut(s)	206
EcoRI	GAATTC	1 cut(s)	951
EcoRII	CCWGG	4 cut(s)	202, 631, 685, 829
EcoT14I	CCWWGG	3 cut(s)	1156, 1192, 1480
EcoT38I	GRGCYC	1 cut(s)	68
ErhI	CCWWGG	3 cut(s)	1156, 1192, 1480
FalI	AAGNNNNNCTT	2 cut(s)	970, 1002
FaqI	GGGAC	1 cut(s)	966
FblI	GTMKAC	2 cut(s)	280, 375
Fnu4HI	GCNGC	3 cut(s)	9, 720, 1221
FokI	GGATG	4 cut(s)	452, 1151, 1320, 1452
FriOI	GRGCYC	1 cut(s)	68
Fsp4HI	GCNGC	3 cut(s)	9, 720, 1221
FspBI	CTAG	6 cut(s)	222, 1416, 1427, 1443, 1545, 1621
GluI	GCNGC	3 cut(s)	9, 720, 1221
GsaI	CCCAGC	1 cut(s)	319
HaeIII	GGCC	9 cut(s)	208, 328, 396, 627, 637, 1024, 1155, 1198, 1287
HapII	CCGG	4 cut(s)	110, 915, 1081, 1596
HincII	GTYRAC	1 cut(s)	246
HindII	GTYRAC	1 cut(s)	246
HinfI	GANTC	3 cut(s)	154, 485, 1084
HpaII	CCGG	4 cut(s)	110, 915, 1081, 1596
HphI	GGTGA	2 cut(s)	21, 904
Hpy166II	GTNNAC	6 cut(s)	246, 281, 376, 615, 1013, 1303
Hpy188I	TCNGA	2 cut(s)	63, 607
Hpy188III	TCNNGA	6 cut(s)	554, 654, 805, 856, 956, 1081
Hpy8I	GTNNAC	6 cut(s)	246, 281, 376, 615, 1013, 1303
HpyAV	CCTTC	5 cut(s)	638, 1040, 1263, 1417, 1551
HpyCH4III	ACNGT	8 cut(s)	187, 250, 943, 1010, 1126, 1137, 1150, 1582
HpyCH4V	TGCA	3 cut(s)	827, 1220, 1435
HpyF3I	CTNAG	5 cut(s)	62, 342, 437, 474, 555
Kpn2I	TCCGGA	1 cut(s)	1080
Kzo9I	GATC	1 cut(s)	550
LguI	GCTCTTC	1 cut(s)	582
Lsp1109I	GCAGC	3 cut(s)	20, 706, 1232
LweI	GCATC	4 cut(s)	598, 772, 1422, 1516
MaeI	CTAG	6 cut(s)	222, 1416, 1427, 1443, 1545, 1621
MaeIII	GTNAC	3 cut(s)	112, 151, 181
MalI	GATC	1 cut(s)	552
MboI	GATC	1 cut(s)	550
MboII	GAAGA	5 cut(s)	524, 569, 978, 981, 1241
MfeI	CAATTG	2 cut(s)	646, 771
MhlI	GDGCHC	5 cut(s)	68, 350, 926, 1119, 1593
MlsI	TGGCCA	2 cut(s)	396, 1287
MluNI	TGGCCA	2 cut(s)	396, 1287
MlyI	GAGTC	2 cut(s)	148, 1093
MmeI	TCCRAC	2 cut(s)	1483, 1564
Mox20I	TGGCCA	2 cut(s)	396, 1287
MroI	TCCGGA	1 cut(s)	1080
MroXI	GAANNNNTTC	1 cut(s)	516
MscI	TGGCCA	2 cut(s)	396, 1287
MseI	TTAA	8 cut(s)	143, 621, 674, 710, 1068, 1230, 1341, 1551
MslI	CAYNNNNRTG	5 cut(s)	288, 845, 917, 1373, 1479
Msp20I	TGGCCA	2 cut(s)	396, 1287
MspA1I	CMGCKG	1 cut(s)	11
MspI	CCGG	4 cut(s)	110, 915, 1081, 1596
MspR9I	CCNGG	5 cut(s)	204, 633, 687, 831, 1597
MunI	CAATTG	2 cut(s)	646, 771
MvaI	CCWGG	4 cut(s)	204, 633, 687, 831
NciI	CCSGG	1 cut(s)	1597
NcoI	CCATGG	1 cut(s)	1480
NdeII	GATC	1 cut(s)	550
NlaIV	GGNNCC	3 cut(s)	457, 1116, 1162
NmuCI	GTSAC	2 cut(s)	151, 181
NspI	RCATGY	2 cut(s)	422, 1191
NspV	TTCGAA	1 cut(s)	580
OliI	CACNNNNGTG	2 cut(s)	845, 1373
PaeI	GCATGC	1 cut(s)	422
PasI	CCCWGGG	1 cut(s)	203
PceI	AGGCCT	1 cut(s)	1024
PciSI	GCTCTTC	1 cut(s)	582
PcsI	WCGNNNNNNNCGW	1 cut(s)	163
PdmI	GAANNNNTTC	1 cut(s)	516
PfeI	GAWTC	1 cut(s)	485
PkrI	GCNGC	3 cut(s)	10, 721, 1222
PleI	GAGTC	2 cut(s)	148, 1092
PpsI	GAGTC	2 cut(s)	148, 1092
PshAI	GACNNNNGTC	2 cut(s)	251, 812
PshBI	ATTAAT	1 cut(s)	621
Psp124BI	GAGCTC	1 cut(s)	68
Psp6I	CCWGG	4 cut(s)	202, 631, 685, 829
PspFI	CCCAGC	1 cut(s)	315
PspGI	CCWGG	4 cut(s)	202, 631, 685, 829
PspN4I	GGNNCC	3 cut(s)	457, 1116, 1162
PspPI	GGNCC	8 cut(s)	107, 206, 326, 455, 593, 635, 1153, 1196
PvuII	CAGCTG	1 cut(s)	11
RsaI	GTAC	3 cut(s)	169, 614, 644
RsaNI	GTAC	3 cut(s)	168, 613, 643
RseI	CAYNNNNRTG	5 cut(s)	288, 845, 917, 1373, 1479
SacI	GAGCTC	1 cut(s)	68
SapI	GCTCTTC	1 cut(s)	582
SaqAI	TTAA	8 cut(s)	143, 621, 674, 710, 1068, 1230, 1341, 1551
SatI	GCNGC	3 cut(s)	9, 720, 1221
Sau3AI	GATC	1 cut(s)	550
Sau96I	GGNCC	8 cut(s)	107, 206, 326, 455, 593, 635, 1153, 1196
SchI	GAGTC	2 cut(s)	148, 1093
ScrFI	CCNGG	5 cut(s)	204, 633, 687, 831, 1597
SduI	GDGCHC	5 cut(s)	68, 350, 926, 1119, 1593
SfaNI	GCATC	4 cut(s)	598, 772, 1422, 1516
SfcI	CTRYAG	1 cut(s)	96
SfuI	TTCGAA	1 cut(s)	580
SinI	GGWCC	3 cut(s)	107, 455, 593
SmiMI	CAYNNNNRTG	5 cut(s)	288, 845, 917, 1373, 1479
SmlI	CTYRAG	2 cut(s)	854, 976
SmoI	CTYRAG	2 cut(s)	854, 976
SpeI	ACTAGT	2 cut(s)	1415, 1426
SphI	GCATGC	1 cut(s)	422
SseBI	AGGCCT	1 cut(s)	1024
SsiI	CCGC	1 cut(s)	722
SspMI	CTAG	6 cut(s)	222, 1416, 1427, 1443, 1545, 1621
SstI	GAGCTC	1 cut(s)	68
StuI	AGGCCT	1 cut(s)	1024
StyD4I	CCNGG	5 cut(s)	202, 631, 685, 829, 1595
StyI	CCWWGG	3 cut(s)	1156, 1192, 1480
TaaI	ACNGT	8 cut(s)	187, 250, 943, 1010, 1126, 1137, 1150, 1582
TaqI	TCGA	5 cut(s)	78, 580, 957, 1256, 1614
TatI	WGTACW	1 cut(s)	642
TfiI	GAWTC	1 cut(s)	485
Tru1I	TTAA	8 cut(s)	143, 621, 674, 710, 1068, 1230, 1341, 1551
Tru9I	TTAA	8 cut(s)	143, 621, 674, 710, 1068, 1230, 1341, 1551
TscAI	CASTG	7 cut(s)	192, 350, 397, 850, 1155, 1315, 1354
TseFI	GTSAC	2 cut(s)	151, 181
TseI	GCWGC	3 cut(s)	8, 719, 1220
Tsp45I	GTSAC	2 cut(s)	151, 181
TspDTI	ATGAA	2 cut(s)	525, 747
TspRI	CASTG	7 cut(s)	192, 350, 397, 850, 1155, 1315, 1354
VpaK11BI	GGWCC	3 cut(s)	107, 455, 593
VspI	ATTAAT	1 cut(s)	621
XapI	RAATTY	5 cut(s)	128, 951, 1063, 1076, 1100
XceI	RCATGY	2 cut(s)	422, 1191
XmiI	GTMKAC	2 cut(s)	280, 375
XmnI	GAANNNNTTC	1 cut(s)	516
XspI	CTAG	6 cut(s)	222, 1416, 1427, 1443, 1545, 1621

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.