Alpha/beta hydrolase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G09690 AT3G09690 AT5G02970 |
| fragaria_vesca | FvH4_3g33440 FvH4_3g33440 FvH4_3g33440 FvH4_3g33440 FvH4_6g15410 FvH4_6g15410 FvH4_6g15410 FvH4_6g15410 FvH4_6g15410 |
| malus_domestica | MD03G1111700.v1.1 MD04G1103800.v1.1 MD11G1126200.v1.1 |
| prunus_persica | Prupe.6G094600_v2.0.a1 Prupe.6G240800_v2.0.a1 Prupe.6G240800_v2.0.a1 Prupe.6G240800_v2.0.a1 Prupe.6G240800_v2.0.a1 |
| pyrus_communis | pycom04g09900 pycom11g10650 pycom12g12240 |
| rosa_chinensis | RchiOBHm_Chr3g0468891 RchiOBHm_Chr5g0060781 |
| rosa_laevigata | RLG00000024403 RLG00000035400 |
| rosa_multiflora | Rmu_co8389401.1_g000001 Rmu_sc0000727.1_g000032 Rmu_sc0001639.1_g000013 Rmu_sc0003298.1_g000004 Rmu_sc0007143.1_g000009 |
| rosa_roxburghii | Rroxscaffold_1G00019940 Rroxscaffold_6G00412480 |
| rosa_rugosa | Rorug03G0097200 Rorug03G0097300 Rorug03G0097400 Rorug05G0334000 |
| rosa_samantha | Rh3AG147000 Rh3BG169500 Rh3DG205600 Rh5AG396700 Rh5BG408700 Rh5CG433400 Rh5DG424000 |
| rosa_wichuraiana | Rw3G013830 Rw5G037400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 869 |
| Acc36I | ACCTGC | 1 cut(s) | 869 |
| AccB1I | GGYRCC | 1 cut(s) | 157 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 51 |
| AccBSI | CCGCTC | 1 cut(s) | 828 |
| AccII | CGCG | 3 cut(s) | 35, 528, 967 |
| AclWI | GGATC | 4 cut(s) | 365, 383, 396, 1112 |
| AcoI | YGGCCR | 1 cut(s) | 129 |
| AcsI | RAATTY | 2 cut(s) | 26, 977 |
| AcyI | GRCGYC | 1 cut(s) | 111 |
| AfaI | GTAC | 3 cut(s) | 107, 317, 986 |
| AfeI | AGCGCT | 1 cut(s) | 852 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 17, 51, 122, 713 |
| AgsI | TTSAA | 2 cut(s) | 600, 749 |
| AjnI | CCWGG | 4 cut(s) | 44, 646, 706, 950 |
| AluBI | AGCT | 6 cut(s) | 294, 340, 590, 779, 1038, 1138 |
| AluI | AGCT | 6 cut(s) | 294, 340, 590, 779, 1038, 1138 |
| Alw26I | GTCTC | 1 cut(s) | 161 |
| AlwI | GGATC | 4 cut(s) | 365, 383, 396, 1112 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 951 |
| Ama87I | CYCGRG | 1 cut(s) | 823 |
| Aor51HI | AGCGCT | 1 cut(s) | 852 |
| AoxI | GGCC | 5 cut(s) | 37, 41, 47, 129, 137 |
| ApeKI | GCWGC | 5 cut(s) | 101, 337, 521, 848, 884 |
| ApoI | RAATTY | 2 cut(s) | 26, 977 |
| AspA2I | CCTAGG | 1 cut(s) | 262 |
| AspLEI | GCGC | 2 cut(s) | 853, 945 |
| AspS9I | GGNCC | 5 cut(s) | 20, 37, 42, 138, 476 |
| AsuC2I | CCSGG | 1 cut(s) | 485 |
| AsuHPI | GGTGA | 3 cut(s) | 421, 722, 1111 |
| AvaI | CYCGRG | 1 cut(s) | 823 |
| AvaII | GGWCC | 2 cut(s) | 20, 476 |
| AvrII | CCTAGG | 1 cut(s) | 262 |
| BamHI | GGATCC | 1 cut(s) | 388 |
| BanI | GGYRCC | 1 cut(s) | 157 |
| BbvI | GCAGC | 5 cut(s) | 113, 349, 508, 860, 896 |
| BccI | CCATC | 3 cut(s) | 124, 536, 1065 |
| BceAI | ACGGC | 4 cut(s) | 34, 116, 124, 203 |
| BciT130I | CCWGG | 4 cut(s) | 46, 648, 708, 952 |
| BciVI | GTATCC | 1 cut(s) | 812 |
| BcnI | CCSGG | 1 cut(s) | 485 |
| BcoDI | GTCTC | 1 cut(s) | 161 |
| BfaI | CTAG | 4 cut(s) | 263, 591, 996, 1008 |
| BfoI | RGCGCY | 1 cut(s) | 854 |
| BfuAI | ACCTGC | 1 cut(s) | 869 |
| BfuI | GTATCC | 1 cut(s) | 812 |
| BlnI | CCTAGG | 1 cut(s) | 262 |
| Bme1390I | CCNGG | 5 cut(s) | 46, 485, 648, 708, 952 |
| Bme18I | GGWCC | 2 cut(s) | 20, 476 |
| BmeT110I | CYCGRG | 1 cut(s) | 823 |
| BmgT120I | GGNCC | 5 cut(s) | 20, 37, 42, 138, 476 |
| BmiI | GGNNCC | 4 cut(s) | 9, 22, 159, 390 |
| BmrFI | CCNGG | 5 cut(s) | 46, 485, 648, 708, 952 |
| BmsI | GCATC | 1 cut(s) | 772 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 712, 744 |
| BpuEI | CTTGAG | 1 cut(s) | 638 |
| BpuMI | CCSGG | 1 cut(s) | 485 |
| BsaBI | GATNNNNATC | 1 cut(s) | 387 |
| BsaHI | GRCGYC | 1 cut(s) | 111 |
| BsaJI | CCNNGG | 6 cut(s) | 44, 50, 219, 262, 483, 951 |
| BsaWI | WCCGGW | 1 cut(s) | 473 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 17, 51, 122, 713 |
| Bse118I | RCCGGY | 2 cut(s) | 39, 154 |
| Bse1I | ACTGG | 1 cut(s) | 22 |
| Bse3DI | GCAATG | 2 cut(s) | 603, 765 |
| Bse8I | GATNNNNATC | 1 cut(s) | 387 |
| BseBI | CCWGG | 4 cut(s) | 46, 648, 708, 952 |
| BseDI | CCNNGG | 6 cut(s) | 44, 50, 219, 262, 483, 951 |
| BseGI | GGATG | 1 cut(s) | 508 |
| BseJI | GATNNNNATC | 1 cut(s) | 387 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 17, 51, 122, 713 |
| BseMI | GCAATG | 2 cut(s) | 603, 765 |
| BseMII | CTCAG | 1 cut(s) | 868 |
| BseNI | ACTGG | 1 cut(s) | 22 |
| BseRI | GAGGAG | 1 cut(s) | 304 |
| BseXI | GCAGC | 5 cut(s) | 113, 349, 508, 860, 896 |
| BseYI | CCCAGC | 1 cut(s) | 172 |
| BsgI | GTGCAG | 2 cut(s) | 259, 903 |
| Bsh1236I | CGCG | 3 cut(s) | 35, 528, 967 |
| BshFI | GGCC | 5 cut(s) | 39, 43, 49, 131, 139 |
| BshNI | GGYRCC | 1 cut(s) | 157 |
| BsiHKCI | CYCGRG | 1 cut(s) | 823 |
| BsiSI | CCGG | 8 cut(s) | 11, 40, 155, 164, 377, 474, 485, 578 |
| BsiWI | CGTACG | 1 cut(s) | 105 |
| BslFI | GGGAC | 4 cut(s) | 98, 192, 287, 613 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 17, 51, 122, 713 |
| BsmAI | GTCTC | 1 cut(s) | 161 |
| BsmBI | CGTCTC | 1 cut(s) | 161 |
| BsmFI | GGGAC | 4 cut(s) | 98, 192, 287, 613 |
| BsnI | GGCC | 5 cut(s) | 39, 43, 49, 131, 139 |
| BsoBI | CYCGRG | 1 cut(s) | 823 |
| Bsp143I | GATC | 5 cut(s) | 64, 357, 388, 700, 1104 |
| BspANI | GGCC | 5 cut(s) | 39, 43, 49, 131, 139 |
| BspCNI | CTCAG | 1 cut(s) | 867 |
| BspFNI | CGCG | 3 cut(s) | 35, 528, 967 |
| BspHI | TCATGA | 1 cut(s) | 924 |
| BspLI | GGNNCC | 4 cut(s) | 9, 22, 159, 390 |
| BspMI | ACCTGC | 1 cut(s) | 869 |
| BspPI | GGATC | 4 cut(s) | 365, 383, 396, 1112 |
| BspT107I | GGYRCC | 1 cut(s) | 157 |
| BsrBI | CCGCTC | 1 cut(s) | 828 |
| BsrDI | GCAATG | 2 cut(s) | 603, 765 |
| BsrFI | RCCGGY | 2 cut(s) | 39, 154 |
| BsrI | ACTGG | 1 cut(s) | 22 |
| BssAI | RCCGGY | 2 cut(s) | 39, 154 |
| BssECI | CCNNGG | 6 cut(s) | 44, 50, 219, 262, 483, 951 |
| BssMI | GATC | 5 cut(s) | 64, 357, 388, 700, 1104 |
| BssNI | GRCGYC | 1 cut(s) | 111 |
| BssT1I | CCWWGG | 1 cut(s) | 262 |
| Bst2UI | CCWGG | 4 cut(s) | 46, 648, 708, 952 |
| Bst6I | CTCTTC | 3 cut(s) | 320, 666, 930 |
| BstACI | GRCGYC | 1 cut(s) | 111 |
| BstC8I | GCNNGC | 8 cut(s) | 37, 41, 148, 152, 418, 526, 836, 840 |
| BstDEI | CTNAG | 2 cut(s) | 775, 854 |
| BstDSI | CCRYGG | 2 cut(s) | 50, 219 |
| BstF5I | GGATG | 1 cut(s) | 508 |
| BstFNI | CGCG | 3 cut(s) | 35, 528, 967 |
| BstH2I | RGCGCY | 1 cut(s) | 854 |
| BstHHI | GCGC | 2 cut(s) | 853, 945 |
| BstKTI | GATC | 5 cut(s) | 67, 360, 391, 703, 1107 |
| BstMAI | GTCTC | 1 cut(s) | 161 |
| BstMBI | GATC | 5 cut(s) | 64, 357, 388, 700, 1104 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 87, 160, 169, 215, 587, 848, 884, 893 |
| BstNI | CCWGG | 4 cut(s) | 46, 648, 708, 952 |
| BstNSI | RCATGY | 1 cut(s) | 842 |
| BstSCI | CCNGG | 5 cut(s) | 44, 483, 646, 706, 950 |
| BstUI | CGCG | 3 cut(s) | 35, 528, 967 |
| BstV1I | GCAGC | 5 cut(s) | 113, 349, 508, 860, 896 |
| BstX2I | RGATCY | 1 cut(s) | 388 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 67 |
| BstYI | RGATCY | 1 cut(s) | 388 |
| BsuI | GTATCC | 1 cut(s) | 812 |
| BsuRI | GGCC | 5 cut(s) | 39, 43, 49, 131, 139 |
| BtgI | CCRYGG | 2 cut(s) | 50, 219 |
| BtsCI | GGATG | 1 cut(s) | 508 |
| BtsI | GCAGTG | 1 cut(s) | 447 |
| BtsIMutI | CAGTG | 2 cut(s) | 15, 447 |
| BveI | ACCTGC | 1 cut(s) | 869 |
| Cac8I | GCNNGC | 8 cut(s) | 37, 41, 148, 152, 418, 526, 836, 840 |
| CaiI | CAGNNNCTG | 1 cut(s) | 951 |
| CciI | TCATGA | 1 cut(s) | 924 |
| CfoI | GCGC | 2 cut(s) | 853, 945 |
| Cfr10I | RCCGGY | 2 cut(s) | 39, 154 |
| Cfr13I | GGNCC | 5 cut(s) | 20, 37, 42, 138, 476 |
| CseI | GACGC | 5 cut(s) | 100, 178, 343, 409, 973 |
| Csp6I | GTAC | 3 cut(s) | 106, 316, 985 |
| CviAII | CATG | 5 cut(s) | 398, 839, 889, 925, 1055 |
| CviQI | GTAC | 3 cut(s) | 106, 316, 985 |
| DdeI | CTNAG | 2 cut(s) | 775, 854 |
| DpnI | GATC | 5 cut(s) | 66, 359, 390, 702, 1106 |
| DpnII | GATC | 5 cut(s) | 64, 357, 388, 700, 1104 |
| EaeI | YGGCCR | 1 cut(s) | 129 |
| Eam1104I | CTCTTC | 3 cut(s) | 320, 666, 930 |
| EarI | CTCTTC | 3 cut(s) | 320, 666, 930 |
| EciI | GGCGGA | 2 cut(s) | 96, 224 |
| Eco130I | CCWWGG | 1 cut(s) | 262 |
| Eco47I | GGWCC | 2 cut(s) | 20, 476 |
| Eco47III | AGCGCT | 1 cut(s) | 852 |
| Eco88I | CYCGRG | 1 cut(s) | 823 |
| EcoRI | GAATTC | 1 cut(s) | 26 |
| EcoRII | CCWGG | 4 cut(s) | 44, 646, 706, 950 |
| EcoT14I | CCWWGG | 1 cut(s) | 262 |
| ErhI | CCWWGG | 1 cut(s) | 262 |
| Esp3I | CGTCTC | 1 cut(s) | 161 |
| FaeI | CATG | 5 cut(s) | 401, 842, 892, 928, 1058 |
| FaqI | GGGAC | 4 cut(s) | 98, 192, 287, 613 |
| FatI | CATG | 5 cut(s) | 397, 838, 888, 924, 1054 |
| FauI | CCCGC | 4 cut(s) | 28, 180, 533, 638 |
| FauNDI | CATATG | 1 cut(s) | 697 |
| FokI | GGATG | 1 cut(s) | 495 |
| FseI | GGCCGGCC | 1 cut(s) | 43 |
| FspBI | CTAG | 4 cut(s) | 263, 591, 996, 1008 |
| GlaI | GCGC | 2 cut(s) | 852, 944 |
| GsaI | CCCAGC | 1 cut(s) | 176 |
| HaeII | RGCGCY | 1 cut(s) | 854 |
| HaeIII | GGCC | 5 cut(s) | 39, 43, 49, 131, 139 |
| HapII | CCGG | 8 cut(s) | 11, 40, 155, 164, 377, 474, 485, 578 |
| HgaI | GACGC | 5 cut(s) | 100, 178, 343, 409, 973 |
| HhaI | GCGC | 2 cut(s) | 853, 945 |
| Hin1I | GRCGYC | 1 cut(s) | 111 |
| Hin1II | CATG | 5 cut(s) | 401, 842, 892, 928, 1058 |
| Hin6I | GCGC | 2 cut(s) | 851, 943 |
| HinP1I | GCGC | 2 cut(s) | 851, 943 |
| HindIII | AAGCTT | 1 cut(s) | 1036 |
| HinfI | GANTC | 9 cut(s) | 268, 275, 311, 394, 427, 549, 651, 749, 917 |
| HpaII | CCGG | 8 cut(s) | 11, 40, 155, 164, 377, 474, 485, 578 |
| HphI | GGTGA | 3 cut(s) | 421, 722, 1111 |
| Hpy166II | GTNNAC | 4 cut(s) | 73, 364, 963, 1126 |
| Hpy188I | TCNGA | 4 cut(s) | 7, 393, 516, 857 |
| Hpy188III | TCNNGA | 9 cut(s) | 196, 229, 272, 361, 424, 539, 866, 925, 1047 |
| Hpy8I | GTNNAC | 4 cut(s) | 73, 364, 963, 1126 |
| HpyAV | CCTTC | 3 cut(s) | 90, 295, 480 |
| HpyCH4V | TGCA | 6 cut(s) | 240, 440, 758, 838, 878, 884 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 87, 160, 169, 215, 587, 848, 884, 893 |
| HpyF3I | CTNAG | 2 cut(s) | 775, 854 |
| Hsp92I | GRCGYC | 1 cut(s) | 111 |
| Hsp92II | CATG | 5 cut(s) | 401, 842, 892, 928, 1058 |
| HspAI | GCGC | 2 cut(s) | 851, 943 |
| KroI | GCCGGC | 1 cut(s) | 39 |
| KroNI | GCCGGC | 1 cut(s) | 41 |
| Kzo9I | GATC | 5 cut(s) | 64, 357, 388, 700, 1104 |
| LmnI | GCTCC | 5 cut(s) | 7, 291, 565, 613, 901 |
| Lsp1109I | GCAGC | 5 cut(s) | 113, 349, 508, 860, 896 |
| LweI | GCATC | 1 cut(s) | 772 |
| MaeI | CTAG | 4 cut(s) | 263, 591, 996, 1008 |
| MaeIII | GTNAC | 4 cut(s) | 331, 421, 722, 1077 |
| MalI | GATC | 5 cut(s) | 66, 359, 390, 702, 1106 |
| MbiI | CCGCTC | 1 cut(s) | 828 |
| MboI | GATC | 5 cut(s) | 64, 357, 388, 700, 1104 |
| MboII | GAAGA | 7 cut(s) | 337, 392, 508, 683, 695, 744, 947 |
| MflI | RGATCY | 1 cut(s) | 388 |
| MluCI | AATT | 4 cut(s) | 26, 350, 977, 1062 |
| MlyI | GAGTC | 3 cut(s) | 269, 320, 645 |
| MmeI | TCCRAC | 1 cut(s) | 648 |
| MnlI | CCTC | 9 cut(s) | 282, 522, 644, 738, 824, 933, 993, 1089, 1095 |
| MroNI | GCCGGC | 1 cut(s) | 39 |
| MseI | TTAA | 1 cut(s) | 906 |
| MspI | CCGG | 8 cut(s) | 11, 40, 155, 164, 377, 474, 485, 578 |
| MspR9I | CCNGG | 5 cut(s) | 46, 485, 648, 708, 952 |
| MvaI | CCWGG | 4 cut(s) | 46, 648, 708, 952 |
| MvnI | CGCG | 3 cut(s) | 35, 528, 967 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 87, 160, 169, 215, 587, 848, 884, 893 |
| NaeI | GCCGGC | 1 cut(s) | 41 |
| NciI | CCSGG | 1 cut(s) | 485 |
| NdeI | CATATG | 1 cut(s) | 697 |
| NdeII | GATC | 5 cut(s) | 64, 357, 388, 700, 1104 |
| NgoMIV | GCCGGC | 1 cut(s) | 39 |
| NlaIII | CATG | 5 cut(s) | 401, 842, 892, 928, 1058 |
| NlaIV | GGNNCC | 4 cut(s) | 9, 22, 159, 390 |
| NmuCI | GTSAC | 4 cut(s) | 331, 421, 722, 1077 |
| NspI | RCATGY | 1 cut(s) | 842 |
| PaeI | GCATGC | 1 cut(s) | 842 |
| PaeR7I | CTCGAG | 1 cut(s) | 823 |
| PagI | TCATGA | 1 cut(s) | 924 |
| PaqCI | CACCTGC | 1 cut(s) | 869 |
| PdiI | GCCGGC | 1 cut(s) | 41 |
| PfeI | GAWTC | 6 cut(s) | 268, 394, 427, 549, 749, 917 |
| Pfl23II | CGTACG | 1 cut(s) | 105 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 51 |
| PleI | GAGTC | 3 cut(s) | 269, 319, 645 |
| PpsI | GAGTC | 3 cut(s) | 269, 319, 645 |
| Psp6I | CCWGG | 4 cut(s) | 44, 646, 706, 950 |
| PspFI | CCCAGC | 1 cut(s) | 172 |
| PspGI | CCWGG | 4 cut(s) | 44, 646, 706, 950 |
| PspLI | CGTACG | 1 cut(s) | 105 |
| PspN4I | GGNNCC | 4 cut(s) | 9, 22, 159, 390 |
| PspPI | GGNCC | 5 cut(s) | 20, 37, 42, 138, 476 |
| PspXI | VCTCGAGB | 1 cut(s) | 823 |
| PstNI | CAGNNNCTG | 1 cut(s) | 951 |
| PsuI | RGATCY | 1 cut(s) | 388 |
| RigI | GGCCGGCC | 1 cut(s) | 43 |
| RsaI | GTAC | 3 cut(s) | 107, 317, 986 |
| RsaNI | GTAC | 3 cut(s) | 106, 316, 985 |
| SaqAI | TTAA | 1 cut(s) | 906 |
| Sau3AI | GATC | 5 cut(s) | 64, 357, 388, 700, 1104 |
| Sau96I | GGNCC | 5 cut(s) | 20, 37, 42, 138, 476 |
| SchI | GAGTC | 3 cut(s) | 269, 320, 645 |
| ScrFI | CCNGG | 5 cut(s) | 46, 485, 648, 708, 952 |
| SfaNI | GCATC | 1 cut(s) | 772 |
| Sfr274I | CTCGAG | 1 cut(s) | 823 |
| SinI | GGWCC | 2 cut(s) | 20, 476 |
| SlaI | CTCGAG | 1 cut(s) | 823 |
| SmlI | CTYRAG | 2 cut(s) | 653, 823 |
| SmoI | CTYRAG | 2 cut(s) | 653, 823 |
| SphI | GCATGC | 1 cut(s) | 842 |
| Sse9I | AATT | 4 cut(s) | 26, 350, 977, 1062 |
| SspMI | CTAG | 4 cut(s) | 263, 591, 996, 1008 |
| StyD4I | CCNGG | 5 cut(s) | 44, 483, 646, 706, 950 |
| StyI | CCWWGG | 1 cut(s) | 262 |
| TaqI | TCGA | 3 cut(s) | 197, 459, 824 |
| TasI | AATT | 4 cut(s) | 26, 350, 977, 1062 |
| TatI | WGTACW | 1 cut(s) | 984 |
| TauI | GCSGC | 5 cut(s) | 90, 163, 206, 209, 256 |
| TfiI | GAWTC | 6 cut(s) | 268, 394, 427, 549, 749, 917 |
| Tru1I | TTAA | 1 cut(s) | 906 |
| Tru9I | TTAA | 1 cut(s) | 906 |
| TscAI | CASTG | 2 cut(s) | 22, 447 |
| TseFI | GTSAC | 4 cut(s) | 331, 421, 722, 1077 |
| TseI | GCWGC | 5 cut(s) | 101, 337, 521, 848, 884 |
| Tsp45I | GTSAC | 4 cut(s) | 331, 421, 722, 1077 |
| TspDTI | ATGAA | 7 cut(s) | 386, 497, 541, 909, 913, 941, 1103 |
| TspGWI | ACGGA | 1 cut(s) | 900 |
| TspRI | CASTG | 2 cut(s) | 22, 447 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 51 |
| VpaK11BI | GGWCC | 2 cut(s) | 20, 476 |
| XapI | RAATTY | 2 cut(s) | 26, 977 |
| XceI | RCATGY | 1 cut(s) | 842 |
| XhoI | CTCGAG | 1 cut(s) | 823 |
| XmaJI | CCTAGG | 1 cut(s) | 262 |
| XspI | CTAG | 4 cut(s) | 263, 591, 996, 1008 |