Rmu_sc0000727.1_g000032

Alpha/beta hydrolase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000727.1
Physical Location & Seq
Forward (+)
142837 .. 146087
3251 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000727.1_g000032.1.cds

Sequence Viewer

Length: 1278 bp
atgtcgtactcggactttgagccggccttctccgcgggtcgggccaggccccggcgacccgacgatcttctcaacggggacggtacggtcagagcggcgtcgtacggcggaggcggcgttcacgtgtattcgacagtcaatgcgatgaagccggtgggagtccgcgagcacgtgcgggagttcgctgcggcggcggcggagatggcggtggagtgcggcaaggggtgtagggatattgtgaggcagagcttggggaatcgggactcgttcgtcttccgaagcttcgagaaggtgaaggagtcgtactgcgggaagagagtgacgaagctgagcgggaagctgagctttgtgaatgagtatctgccggaggataaggagccggttcatgctttgtctgtgattctgttcgtctccgttctggcttttgcaggaataccgggacttaaggcttcactgttggaagagtttggcgttcacttattgacatatgatcttcctggatttggagagagtgatccgcatcccaacaggaaccttgaaacttcagcaatggatatgttgctcttagctgatgctgttggtgttaatgacaagttttgggttgttggatactcgagtggaagcatgcatgcttgggcagcactcagatacattcctgatagacttgcaggtgctgccatgttggctccaatggttaatccatacgattcaatcatgaacagggaagagagacgtagaacctggaaaaggtggacaggaagaaggcaacttttgtactttttagctaggagatttcccagatttctttctttcttctaccagcagagcttcttatctggaaagcatggacaaatcgacaaatggctgtctttgtcactgggaaagagggataaggctttaatagagagtccaatctatgaagaattctggcaaagggatgttgaagagtcaattaggcagggaagtgcaaaaccttttgtggaggaagctgttttacaggggatggatgataaggtggcaccaccatcaatgactgattttgtgcacaggattttaccaggagctgctgtacataagctcccctatgagggccatttcacctacatctacttttgtgatgaatgccatagacagatattcactacacttttcggaacaccacaagggccaatcaacaatattgccacagaagtggatcaaagtcctctccaagttcataccgaagaacaggatgagataacacttggtgattcggttctggcacgagctgagacatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

425

Amino Acids

47.73

Weight (kDa)

6.21

Isoelectric Point (pI)

50.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 659
AasI GACNNNNNNGTC 2 cut(s) 86, 269
Acc36I ACCTGC 1 cut(s) 659
AccB1I GGYRCC 1 cut(s) 1018
AccBSI CCGCTC 2 cut(s) 95, 333
AccII CGCG 2 cut(s) 35, 165
AclWI GGATC 2 cut(s) 509, 1203
AcsI RAATTY 1 cut(s) 923
AcuI CTGAAG 1 cut(s) 528
AcvI CACGTG 2 cut(s) 124, 172
AcyI GRCGYC 1 cut(s) 98
AdeI CACNNNGTG 1 cut(s) 1247
AfaI GTAC 6 cut(s) 8, 85, 104, 305, 776, 1071
AfiI CCNNNNNNNGG 6 cut(s) 39, 51, 503, 747, 1087, 1088
AflII CTTAAG 1 cut(s) 443
AflIII ACRYGT 1 cut(s) 123
AgsI TTSAA 3 cut(s) 539, 711, 944
AjnI CCWGG 4 cut(s) 44, 496, 740, 1057
AleI CACNNNNGTG 1 cut(s) 1190
AloI GAACNNNNNNTCC 2 cut(s) 102, 134
Alw21I GWGCWC 2 cut(s) 171, 1047
Alw26I GTCTC 3 cut(s) 415, 724, 1265
Alw44I GTGCAC 1 cut(s) 1043
AlwI GGATC 2 cut(s) 509, 1203
AlwNI CAGNNNCTG 2 cut(s) 674, 1064
Ama87I CYCGRG 1 cut(s) 613
AoxI GGCC 5 cut(s) 24, 42, 47, 1090, 1166
ApaLI GTGCAC 1 cut(s) 1043
ApeKI GCWGC 4 cut(s) 185, 638, 674, 1064
ApoI RAATTY 1 cut(s) 923
AspS9I GGNCC 4 cut(s) 42, 48, 1090, 1166
AsuC2I CCSGG 2 cut(s) 52, 438
AsuHPI GGTGA 3 cut(s) 304, 1090, 1259
AvaI CYCGRG 1 cut(s) 613
BaeGI GKGCMC 1 cut(s) 1047
BaeI ACNNNNGTAYC 2 cut(s) 601, 634
BanI GGYRCC 1 cut(s) 1018
BarI GAAGNNNNNNTAC 4 cut(s) 287, 319, 978, 1010
BauI CACGAG 1 cut(s) 1263
BbrPI CACGTG 2 cut(s) 124, 172
BbsI GAAGAC 1 cut(s) 265
Bbv12I GWGCWC 2 cut(s) 171, 1047
BbvI GCAGC 4 cut(s) 172, 650, 661, 1051
BccI CCATC 3 cut(s) 196, 997, 1033
BceAI ACGGC 1 cut(s) 121
BciT130I CCWGG 4 cut(s) 46, 498, 742, 1059
BciVI GTATCC 1 cut(s) 602
BcnI CCSGG 2 cut(s) 52, 438
BcoDI GTCTC 3 cut(s) 415, 724, 1265
BfaI CTAG 1 cut(s) 786
BfrI CTTAAG 1 cut(s) 443
BfuAI ACCTGC 1 cut(s) 659
BfuI GTATCC 1 cut(s) 602
BglI GCCNNNNNGGC 1 cut(s) 683
BlpI GCTNAGC 2 cut(s) 329, 341
Bme1390I CCNGG 6 cut(s) 46, 52, 438, 498, 742, 1059
BmeT110I CYCGRG 1 cut(s) 613
BmgT120I GGNCC 4 cut(s) 42, 48, 1090, 1166
BmiI GGNNCC 5 cut(s) 50, 378, 533, 687, 1020
BmrFI CCNGG 6 cut(s) 46, 52, 438, 498, 742, 1059
BmrI ACTGGG 1 cut(s) 887
BmsI GCATC 2 cut(s) 529, 562
BmuI ACTGGG 1 cut(s) 887
BpiI GAAGAC 1 cut(s) 265
Bpu1102I GCTNAGC 2 cut(s) 329, 341
BpuMI CCSGG 2 cut(s) 52, 438
BsaAI YACGTR 2 cut(s) 124, 172
BsaBI GATNNNNATC 1 cut(s) 519
BsaHI GRCGYC 1 cut(s) 98
BsaJI CCNNGG 2 cut(s) 33, 50
BsaXI ACNNNNNCTCC 6 cut(s) 102, 132, 1053, 1062, 1083, 1092
Bsc4I CCNNNNNNNGG 6 cut(s) 39, 51, 503, 747, 1087, 1088
Bse118I RCCGGY 3 cut(s) 22, 151, 379
Bse1I ACTGG 1 cut(s) 882
Bse3DI GCAATG 1 cut(s) 555
Bse8I GATNNNNATC 1 cut(s) 519
BseBI CCWGG 4 cut(s) 46, 498, 742, 1059
BseDI CCNNGG 2 cut(s) 33, 50
BseGI GGATG 5 cut(s) 520, 943, 1008, 1012, 1237
BseJI GATNNNNATC 1 cut(s) 519
BseLI CCNNNNNNNGG 6 cut(s) 39, 51, 503, 747, 1087, 1088
BseMI GCAATG 1 cut(s) 555
BseMII CTCAG 4 cut(s) 320, 332, 658, 1260
BseNI ACTGG 1 cut(s) 882
BseSI GKGCMC 1 cut(s) 1047
BseXI GCAGC 4 cut(s) 172, 650, 661, 1051
Bsh1236I CGCG 2 cut(s) 35, 165
BshFI GGCC 5 cut(s) 26, 44, 49, 1092, 1168
BshNI GGYRCC 1 cut(s) 1018
BsiHKAI GWGCWC 2 cut(s) 171, 1047
BsiHKCI CYCGRG 1 cut(s) 613
BsiSI CCGG 6 cut(s) 23, 52, 152, 365, 380, 437
BsiWI CGTACG 1 cut(s) 102
BslFI GGGAC 3 cut(s) 92, 275, 453
BslI CCNNNNNNNGG 6 cut(s) 39, 51, 503, 747, 1087, 1088
BsmAI GTCTC 3 cut(s) 415, 724, 1265
BsmBI CGTCTC 2 cut(s) 415, 724
BsmFI GGGAC 3 cut(s) 92, 275, 453
BsmI GAATGC 1 cut(s) 1127
BsnI GGCC 5 cut(s) 26, 44, 49, 1092, 1168
BsoBI CYCGRG 1 cut(s) 613
Bsp1286I GDGCHC 2 cut(s) 171, 1047
Bsp1407I TGTACA 1 cut(s) 1069
Bsp143I GATC 4 cut(s) 64, 490, 514, 1195
Bsp1720I GCTNAGC 2 cut(s) 329, 341
BspANI GGCC 5 cut(s) 26, 44, 49, 1092, 1168
BspCNI CTCAG 4 cut(s) 321, 333, 657, 1261
BspFNI CGCG 2 cut(s) 35, 165
BspHI TCATGA 1 cut(s) 714
BspLI GGNNCC 5 cut(s) 50, 378, 533, 687, 1020
BspMI ACCTGC 1 cut(s) 659
BspPI GGATC 2 cut(s) 509, 1203
BspT107I GGYRCC 1 cut(s) 1018
BspTI CTTAAG 1 cut(s) 443
BsrBI CCGCTC 2 cut(s) 95, 333
BsrDI GCAATG 1 cut(s) 555
BsrFI RCCGGY 3 cut(s) 22, 151, 379
BsrGI TGTACA 1 cut(s) 1069
BsrI ACTGG 1 cut(s) 882
BssAI RCCGGY 3 cut(s) 22, 151, 379
BssECI CCNNGG 2 cut(s) 33, 50
BssMI GATC 4 cut(s) 64, 490, 514, 1195
BssNI GRCGYC 1 cut(s) 98
BssSI CACGAG 1 cut(s) 1263
Bst2BI CACGAG 1 cut(s) 1263
Bst2UI CCWGG 4 cut(s) 46, 498, 742, 1059
Bst4CI ACNGT 4 cut(s) 83, 88, 136, 456
Bst6I CTCTTC 4 cut(s) 308, 456, 720, 939
BstACI GRCGYC 1 cut(s) 98
BstAFI CTTAAG 1 cut(s) 443
BstAPI GCANNNNNTGC 1 cut(s) 674
BstAUI TGTACA 1 cut(s) 1069
BstBAI YACGTR 2 cut(s) 124, 172
BstC8I GCNNGC 4 cut(s) 24, 167, 626, 630
BstDEI CTNAG 5 cut(s) 329, 341, 565, 644, 1269
BstDSI CCRYGG 1 cut(s) 33
BstENI CCTNNNNNAGG 1 cut(s) 745
BstF5I GGATG 5 cut(s) 520, 943, 1008, 1012, 1237
BstFNI CGCG 2 cut(s) 35, 165
BstKTI GATC 4 cut(s) 67, 493, 517, 1198
BstMAI GTCTC 3 cut(s) 415, 724, 1265
BstMBI GATC 4 cut(s) 64, 490, 514, 1195
BstMWI GCNNNNNNNGC 9 cut(s) 32, 41, 114, 191, 194, 203, 638, 674, 683
BstNI CCWGG 4 cut(s) 46, 498, 742, 1059
BstNSI RCATGY 2 cut(s) 628, 632
BstSCI CCNGG 6 cut(s) 44, 50, 436, 496, 740, 1057
BstSLI GKGCMC 1 cut(s) 1047
BstUI CGCG 2 cut(s) 35, 165
BstV1I GCAGC 4 cut(s) 172, 650, 661, 1051
BstV2I GAAGAC 1 cut(s) 265
BstXI CCANNNNNNTGG 1 cut(s) 1192
BsuI GTATCC 1 cut(s) 602
BsuRI GGCC 5 cut(s) 26, 44, 49, 1092, 1168
BtgI CCRYGG 1 cut(s) 33
BtgZI GCGATG 1 cut(s) 158
BtsCI GGATG 5 cut(s) 520, 943, 1008, 1012, 1237
BtsIMutI CAGTG 2 cut(s) 452, 875
BveI ACCTGC 1 cut(s) 659
Cac8I GCNNGC 4 cut(s) 24, 167, 626, 630
CaiI CAGNNNCTG 2 cut(s) 674, 1064
CciI TCATGA 1 cut(s) 714
Cfr10I RCCGGY 3 cut(s) 22, 151, 379
Cfr13I GGNCC 4 cut(s) 42, 48, 1090, 1166
Cfr42I CCGCGG 1 cut(s) 36
CseI GACGC 1 cut(s) 87
Csp6I GTAC 6 cut(s) 7, 84, 103, 304, 775, 1070
CviAII CATG 7 cut(s) 386, 625, 629, 679, 715, 845, 1275
CviQI GTAC 6 cut(s) 7, 84, 103, 304, 775, 1070
DdeI CTNAG 5 cut(s) 329, 341, 565, 644, 1269
DpnI GATC 4 cut(s) 66, 492, 516, 1197
DpnII GATC 4 cut(s) 64, 490, 514, 1195
DraIII CACNNNGTG 1 cut(s) 1247
DrdI GACNNNNNNGTC 2 cut(s) 86, 269
DseDI GACNNNNNNGTC 2 cut(s) 86, 269
Eam1104I CTCTTC 4 cut(s) 308, 456, 720, 939
EarI CTCTTC 4 cut(s) 308, 456, 720, 939
EciI GGCGGA 2 cut(s) 123, 212
Eco57I CTGAAG 1 cut(s) 528
Eco72I CACGTG 2 cut(s) 124, 172
Eco88I CYCGRG 1 cut(s) 613
EcoNI CCTNNNNNAGG 1 cut(s) 745
EcoO109I RGGNCCY 1 cut(s) 48
EcoRI GAATTC 1 cut(s) 923
EcoRII CCWGG 4 cut(s) 44, 496, 740, 1057
EcoT22I ATGCAT 1 cut(s) 630
Esp3I CGTCTC 2 cut(s) 415, 724
FaeI CATG 7 cut(s) 389, 628, 632, 682, 718, 848, 1278
FalI AAGNNNNNCTT 2 cut(s) 329, 361
FaqI GGGAC 3 cut(s) 92, 275, 453
FatI CATG 7 cut(s) 385, 624, 628, 678, 714, 844, 1274
FauI CCCGC 4 cut(s) 28, 168, 302, 326
FauNDI CATATG 1 cut(s) 487
FokI GGATG 5 cut(s) 507, 950, 1015, 1019, 1244
FspBI CTAG 1 cut(s) 786
HaeIII GGCC 5 cut(s) 26, 44, 49, 1092, 1168
HapII CCGG 6 cut(s) 23, 52, 152, 365, 380, 437
HgaI GACGC 1 cut(s) 87
Hin1I GRCGYC 1 cut(s) 98
Hin1II CATG 7 cut(s) 389, 628, 632, 682, 718, 848, 1278
HindIII AAGCTT 1 cut(s) 280
HinfI GANTC 9 cut(s) 159, 256, 263, 299, 400, 707, 907, 947, 1250
HpaII CCGG 6 cut(s) 23, 52, 152, 365, 380, 437
HphI GGTGA 3 cut(s) 304, 1090, 1259
Hpy166II GTNNAC 4 cut(s) 121, 475, 753, 1045
Hpy188I TCNGA 5 cut(s) 13, 92, 278, 647, 1154
Hpy188III TCNNGA 5 cut(s) 260, 286, 656, 715, 837
Hpy8I GTNNAC 4 cut(s) 121, 475, 753, 1045
Hpy99I CGWCG 2 cut(s) 65, 103
HpyAV CCTTC 4 cut(s) 37, 283, 289, 756
HpyCH4III ACNGT 4 cut(s) 83, 88, 136, 456
HpyCH4IV ACGT 3 cut(s) 123, 171, 733
HpyCH4V TGCA 5 cut(s) 428, 628, 668, 968, 1045
HpyF10VI GCNNNNNNNGC 9 cut(s) 32, 41, 114, 191, 194, 203, 638, 674, 683
HpyF3I CTNAG 5 cut(s) 329, 341, 565, 644, 1269
HpySE526I ACGT 3 cut(s) 123, 171, 733
Hsp92I GRCGYC 1 cut(s) 98
Hsp92II CATG 7 cut(s) 389, 628, 632, 682, 718, 848, 1278
KroI GCCGGC 1 cut(s) 22
KroNI GCCGGC 1 cut(s) 24
KspI CCGCGG 1 cut(s) 36
Kzo9I GATC 4 cut(s) 64, 490, 514, 1195
LmnI GCTCC 4 cut(s) 376, 691, 1061, 1083
Lsp1109I GCAGC 4 cut(s) 172, 650, 661, 1051
LweI GCATC 2 cut(s) 529, 562
MaeI CTAG 1 cut(s) 786
MaeII ACGT 3 cut(s) 123, 171, 733
MaeIII GTNAC 2 cut(s) 319, 873
MalI GATC 4 cut(s) 66, 492, 516, 1197
MbiI CCGCTC 2 cut(s) 95, 333
MboI GATC 4 cut(s) 64, 490, 514, 1195
MhlI GDGCHC 2 cut(s) 171, 1047
MluCI AATT 2 cut(s) 923, 951
MlyI GAGTC 5 cut(s) 168, 257, 308, 916, 956
MmeI TCCRAC 2 cut(s) 438, 586
MnlI CCTC 7 cut(s) 104, 234, 361, 879, 976, 1081, 1215
Mph1103I ATGCAT 1 cut(s) 630
MroNI GCCGGC 1 cut(s) 22
MseI TTAA 4 cut(s) 444, 585, 696, 899
MslI CAYNNNNRTG 1 cut(s) 1190
MspA1I CMGCKG 1 cut(s) 35
MspCI CTTAAG 1 cut(s) 443
MspI CCGG 6 cut(s) 23, 52, 152, 365, 380, 437
MspR9I CCNGG 6 cut(s) 46, 52, 438, 498, 742, 1059
Mva1269I GAATGC 1 cut(s) 1127
MvaI CCWGG 4 cut(s) 46, 498, 742, 1059
MvnI CGCG 2 cut(s) 35, 165
MwoI GCNNNNNNNGC 9 cut(s) 32, 41, 114, 191, 194, 203, 638, 674, 683
NaeI GCCGGC 1 cut(s) 24
NciI CCSGG 2 cut(s) 52, 438
NdeI CATATG 1 cut(s) 487
NdeII GATC 4 cut(s) 64, 490, 514, 1195
NgoMIV GCCGGC 1 cut(s) 22
NlaIII CATG 7 cut(s) 389, 628, 632, 682, 718, 848, 1278
NlaIV GGNNCC 5 cut(s) 50, 378, 533, 687, 1020
NmuCI GTSAC 2 cut(s) 319, 873
NsiI ATGCAT 1 cut(s) 630
NspI RCATGY 2 cut(s) 628, 632
OliI CACNNNNGTG 1 cut(s) 1190
PaeI GCATGC 2 cut(s) 628, 632
PaeR7I CTCGAG 1 cut(s) 613
PagI TCATGA 1 cut(s) 714
PaqCI CACCTGC 1 cut(s) 659
PctI GAATGC 1 cut(s) 1127
PdiI GCCGGC 1 cut(s) 24
PfeI GAWTC 4 cut(s) 256, 400, 707, 1250
Pfl23II CGTACG 1 cut(s) 102
PfoI TCCNGGA 1 cut(s) 496
PleI GAGTC 5 cut(s) 167, 257, 307, 915, 955
PmaCI CACGTG 2 cut(s) 124, 172
PmlI CACGTG 2 cut(s) 124, 172
PpsI GAGTC 5 cut(s) 167, 257, 307, 915, 955
Ppu21I YACGTR 2 cut(s) 124, 172
Psp6I CCWGG 4 cut(s) 44, 496, 740, 1057
PspCI CACGTG 2 cut(s) 124, 172
PspGI CCWGG 4 cut(s) 44, 496, 740, 1057
PspLI CGTACG 1 cut(s) 102
PspN4I GGNNCC 5 cut(s) 50, 378, 533, 687, 1020
PspPI GGNCC 4 cut(s) 42, 48, 1090, 1166
PspXI VCTCGAGB 1 cut(s) 613
PstNI CAGNNNCTG 2 cut(s) 674, 1064
RsaI GTAC 6 cut(s) 8, 85, 104, 305, 776, 1071
RsaNI GTAC 6 cut(s) 7, 84, 103, 304, 775, 1070
RseI CAYNNNNRTG 1 cut(s) 1190
SacII CCGCGG 1 cut(s) 36
SaqAI TTAA 4 cut(s) 444, 585, 696, 899
Sau3AI GATC 4 cut(s) 64, 490, 514, 1195
Sau96I GGNCC 4 cut(s) 42, 48, 1090, 1166
SchI GAGTC 5 cut(s) 168, 257, 308, 916, 956
ScrFI CCNGG 6 cut(s) 46, 52, 438, 498, 742, 1059
SduI GDGCHC 2 cut(s) 171, 1047
SfaNI GCATC 2 cut(s) 529, 562
Sfr274I CTCGAG 1 cut(s) 613
Sfr303I CCGCGG 1 cut(s) 36
SgrBI CCGCGG 1 cut(s) 36
SlaI CTCGAG 1 cut(s) 613
SmiMI CAYNNNNRTG 1 cut(s) 1190
SmlI CTYRAG 2 cut(s) 443, 613
SmoI CTYRAG 2 cut(s) 443, 613
SphI GCATGC 2 cut(s) 628, 632
Sse9I AATT 2 cut(s) 923, 951
SspI AATATT 1 cut(s) 1180
SspMI CTAG 1 cut(s) 786
StyD4I CCNGG 6 cut(s) 44, 50, 436, 496, 740, 1057
TaaI ACNGT 4 cut(s) 83, 88, 136, 456
TaiI ACGT 3 cut(s) 126, 174, 736
TaqI TCGA 4 cut(s) 131, 285, 614, 855
TasI AATT 2 cut(s) 923, 951
TatI WGTACW 2 cut(s) 774, 1069
TauI GCSGC 6 cut(s) 98, 117, 191, 194, 197, 219
TfiI GAWTC 4 cut(s) 256, 400, 707, 1250
Tru1I TTAA 4 cut(s) 444, 585, 696, 899
Tru9I TTAA 4 cut(s) 444, 585, 696, 899
TscAI CASTG 2 cut(s) 459, 882
TseFI GTSAC 2 cut(s) 319, 873
TseI GCWGC 4 cut(s) 185, 638, 674, 1064
Tsp45I GTSAC 2 cut(s) 319, 873
TspDTI ATGAA 6 cut(s) 161, 374, 731, 933, 1134, 1205
TspGWI ACGGA 1 cut(s) 403
TspRI CASTG 2 cut(s) 459, 882
Vha464I CTTAAG 1 cut(s) 443
VneI GTGCAC 1 cut(s) 1043
XagI CCTNNNNNAGG 1 cut(s) 745
XapI RAATTY 1 cut(s) 923
XceI RCATGY 2 cut(s) 628, 632
XhoI CTCGAG 1 cut(s) 613
XspI CTAG 1 cut(s) 786
Zsp2I ATGCAT 1 cut(s) 630
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.