Rh3BG169500

Alpha/beta hydrolase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
Physical Location & Seq
Forward (+)
14556205 .. 14561280
5076 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG169500.1

Sequence Viewer

Length: 1260 bp
ATGGCGGAGGTGAGAGGATCGAACTCATTCCGTGACGAGATGGCCAGTCTATTGGGGGACGCAGGGATCCGATACGCCGCGGCCGATCCTATCGGAATCTCGACGCCGGTGTTTGCAGCACCGACGGCGGATTACGTCTCCGGCTACTCGCCGGAGCAATCGGAGAGTTTGAAGGATCAGGTTAAGGGATTTGCAATGGCTTGGGGGGAGATTCTACTGGATTTGGGGAGAGGATGTAAGGACATTGTGCAGCAGAGCTTTTTGACTGAGGACTCGTACATTGTGAGGAAGCTTGAGACGCCCTGCGCCAAAGCGTCGGCGAAGTTGAGGTACTTGAATGAGTTTTTGCCGGAGGATCGCGATCCGGCTTACGCTTGGCTGGTGATTCTCTTTGTTTTCATTCTTGCACTTACAGCTATAAGTATAAATACCGAACATGACAGCTTGGTTCGACAAGTGAAGAGAGTGCAGATGCATCCTCCCAGTGCTACTCATGTACTACTTCCAGATGGAAGGCGATTGGCTTATCACGAGCAAGGTGTCCCAGCTAAAACAACTCGGATTTCACTGATTGCTCCTCATTCTTTTCTTTCATCACGACTTGCAGGTATACCGGGAATTAAAATATCATTGCTTGAAGAGTTTGGTATCCGCTTGATCACATATGATCTTCCTGGCTTTGGGGAGAGTGATCCTCATCCCAGCAGGAATCTTAACTCATCTGCAATGGATATCCTGTGTTTAGCCAATGCCATTGGTATTGAAGACAAGTTCTGGGTGCTGGGCCACTCAAGTGGAGCCATGCATGCTTGGGCTGCTCTTAGATACATTCCTGACAAAGTTGCAGGTGCAGCTATGGTGGCCCCAATAATTAATCCCTATGAACCTGGCATGACTAAGGAAGAGATGAAAAGAACTTGGGAACCATGGGTTTTTAGAAGGAAAACAATGTACTTCTTAGCTCGTAGGTTTCCAAAGTTTCTAAACTCTTATTATCGCCGAAGCTTCCTATCAGGAAAGCATGACAGAATTGACAAGTGGTTATCTCTCTCACTGGGCAAGAGGGTAAGTTCATTAAAATTTGAAATTTCTTTGCCTTCTCTTTATAATGGTGAGAGAGAAGGAATCAACGCCAGCTTGAATACAGATTTATCTCCTTTTTTGGTAATGCATGATGATTACATGGGGAATCGTTTTGTGGGAGTCAAATTGCTTTTTCTTATAATATTTGAGTTAGCTTTTTATGACTATAATAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

419

Amino Acids

47.14

Weight (kDa)

8.25

Isoelectric Point (pI)

47.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_1 PF00561 209 - 330 4.6e-14 alpha/beta hydrolase fold
Hydrolase_4 PF12146 212 - 304 1.7e-08 Serine aminopeptidase, S33
Abhydrolase_6 PF12697 215 - 338 9.4e-10 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1107, 1223
AarI CACCTGC 1 cut(s) 836
Acc36I ACCTGC 2 cut(s) 596, 836
AccI GTMKAC 1 cut(s) 610
AccII CGCG 2 cut(s) 80, 360
AciI CCGC 5 cut(s) 5, 78, 80, 128, 652
AclWI GGATC 8 cut(s) 25, 61, 74, 80, 183, 356, 363, 686
AcoI YGGCCR 2 cut(s) 42, 81
AcsI RAATTY 2 cut(s) 1079, 1086
AcyI GRCGYC 2 cut(s) 104, 299
AfaI GTAC 4 cut(s) 278, 332, 498, 953
AfiI CCNNNNNNNGG 1 cut(s) 680
AgsI TTSAA 6 cut(s) 172, 337, 638, 764, 1085, 1141
AjnI CCWGG 2 cut(s) 673, 886
AleI CACNNNNGTG 1 cut(s) 792
Alw26I GTCTC 2 cut(s) 142, 290
AlwI GGATC 8 cut(s) 25, 61, 74, 80, 183, 356, 363, 686
AoxI GGCC 4 cut(s) 42, 81, 784, 861
ApeKI GCWGC 4 cut(s) 116, 250, 815, 851
ApoI RAATTY 2 cut(s) 1079, 1086
AseI ATTAAT 1 cut(s) 873
Asp700I GAANNNNTTC 1 cut(s) 26
AspLEI GCGC 1 cut(s) 308
AspS9I GGNCC 2 cut(s) 784, 862
AsuC2I CCSGG 1 cut(s) 615
AsuHPI GGTGA 3 cut(s) 22, 394, 1124
BalI TGGCCA 1 cut(s) 44
BamHI GGATCC 1 cut(s) 66
BarI GAAGNNNNNNTAC 2 cut(s) 314, 346
BauI CACGAG 1 cut(s) 530
BbsI GAAGAC 1 cut(s) 771
BbvI GCAGC 4 cut(s) 128, 262, 802, 863
BccI CCATC 2 cut(s) 34, 503
BceAI ACGGC 1 cut(s) 141
BciT130I CCWGG 2 cut(s) 675, 888
BciVI GTATCC 1 cut(s) 659
BclI TGATCA 1 cut(s) 657
BcnI CCSGG 1 cut(s) 615
BcoDI GTCTC 2 cut(s) 142, 290
BfuAI ACCTGC 2 cut(s) 596, 836
BfuI GTATCC 1 cut(s) 659
BisI GCNGC 6 cut(s) 78, 81, 117, 251, 816, 852
BlsI GCNGC 6 cut(s) 79, 82, 118, 252, 817, 853
Bme1390I CCNGG 3 cut(s) 615, 675, 888
BmgT120I GGNCC 2 cut(s) 784, 862
BmiI GGNNCC 4 cut(s) 68, 799, 864, 924
BmrFI CCNGG 3 cut(s) 615, 675, 888
BmrI ACTGGG 2 cut(s) 477, 1064
BmsI GCATC 2 cut(s) 462, 484
BmuI ACTGGG 2 cut(s) 477, 1064
BpiI GAAGAC 1 cut(s) 771
BplI GAGNNNNNCTC 2 cut(s) 679, 711
BpuEI CTTGAG 2 cut(s) 314, 775
BpuMI CCSGG 1 cut(s) 615
BsaBI GATNNNNATC 2 cut(s) 360, 696
BsaHI GRCGYC 2 cut(s) 104, 299
BsaJI CCNNGG 2 cut(s) 78, 926
BsaXI ACNNNNNCTCC 2 cut(s) 220, 250
Bsc4I CCNNNNNNNGG 1 cut(s) 680
Bse118I RCCGGY 1 cut(s) 106
Bse1I ACTGG 4 cut(s) 45, 222, 483, 1059
Bse3DI GCAATG 3 cut(s) 201, 629, 732
Bse8I GATNNNNATC 2 cut(s) 360, 696
BseBI CCWGG 2 cut(s) 675, 888
BseDI CCNNGG 2 cut(s) 78, 926
BseGI GGATG 3 cut(s) 239, 475, 697
BseJI GATNNNNATC 2 cut(s) 360, 696
BseLI CCNNNNNNNGG 1 cut(s) 680
BseMI GCAATG 3 cut(s) 201, 629, 732
BseMII CTCAG 1 cut(s) 258
BseNI ACTGG 4 cut(s) 45, 222, 483, 1059
BseRI GAGGAG 1 cut(s) 567
BseX3I CGGCCG 1 cut(s) 81
BseXI GCAGC 4 cut(s) 128, 262, 802, 863
BseYI CCCAGC 3 cut(s) 544, 701, 781
BsgI GTGCAG 3 cut(s) 269, 488, 870
Bsh1236I CGCG 2 cut(s) 80, 360
Bsh1285I CGRYCG 1 cut(s) 84
BshFI GGCC 4 cut(s) 44, 83, 786, 863
BsiEI CGRYCG 1 cut(s) 84
BsiSI CCGG 6 cut(s) 107, 141, 152, 350, 365, 614
BslFI GGGAC 2 cut(s) 71, 527
BslI CCNNNNNNNGG 1 cut(s) 680
BsmAI GTCTC 2 cut(s) 142, 290
BsmBI CGTCTC 2 cut(s) 142, 290
BsmFI GGGAC 2 cut(s) 71, 527
BsnI GGCC 4 cut(s) 44, 83, 786, 863
Bsp143I GATC 9 cut(s) 17, 66, 85, 175, 355, 361, 657, 667, 691
Bsp19I CCATGG 1 cut(s) 926
Bsp68I TCGCGA 1 cut(s) 360
BspACI CCGC 5 cut(s) 5, 78, 80, 128, 652
BspANI GGCC 4 cut(s) 44, 83, 786, 863
BspCNI CTCAG 1 cut(s) 259
BspFNI CGCG 2 cut(s) 80, 360
BspLI GGNNCC 4 cut(s) 68, 799, 864, 924
BspMI ACCTGC 2 cut(s) 596, 836
BspPI GGATC 8 cut(s) 25, 61, 74, 80, 183, 356, 363, 686
BsrDI GCAATG 3 cut(s) 201, 629, 732
BsrFI RCCGGY 1 cut(s) 106
BsrI ACTGG 4 cut(s) 45, 222, 483, 1059
BssAI RCCGGY 1 cut(s) 106
BssECI CCNNGG 2 cut(s) 78, 926
BssMI GATC 9 cut(s) 17, 66, 85, 175, 355, 361, 657, 667, 691
BssNAI GTATAC 1 cut(s) 611
BssNI GRCGYC 2 cut(s) 104, 299
BssSI CACGAG 1 cut(s) 530
BssT1I CCWWGG 1 cut(s) 926
Bst1107I GTATAC 1 cut(s) 611
Bst2BI CACGAG 1 cut(s) 530
Bst2UI CCWGG 2 cut(s) 675, 888
Bst6I CTCTTC 3 cut(s) 455, 633, 897
BstACI GRCGYC 2 cut(s) 104, 299
BstC8I GCNNGC 2 cut(s) 807, 1135
BstDEI CTNAG 4 cut(s) 267, 821, 897, 958
BstDSI CCRYGG 2 cut(s) 78, 926
BstF5I GGATG 3 cut(s) 239, 475, 697
BstFNI CGCG 2 cut(s) 80, 360
BstHHI GCGC 1 cut(s) 308
BstKTI GATC 9 cut(s) 20, 69, 88, 178, 358, 364, 660, 670, 694
BstMAI GTCTC 2 cut(s) 142, 290
BstMBI GATC 9 cut(s) 17, 66, 85, 175, 355, 361, 657, 667, 691
BstMCI CGRYCG 1 cut(s) 84
BstMWI GCNNNNNNNGC 7 cut(s) 125, 298, 413, 806, 815, 851, 860
BstNI CCWGG 2 cut(s) 675, 888
BstNSI RCATGY 1 cut(s) 809
BstSCI CCNGG 3 cut(s) 613, 673, 886
BstUI CGCG 2 cut(s) 80, 360
BstV1I GCAGC 4 cut(s) 128, 262, 802, 863
BstV2I GAAGAC 1 cut(s) 771
BstX2I RGATCY 1 cut(s) 66
BstXI CCANNNNNNTGG 2 cut(s) 52, 794
BstYI RGATCY 1 cut(s) 66
BstZ17I GTATAC 1 cut(s) 611
BstZI CGGCCG 1 cut(s) 81
BsuI GTATCC 1 cut(s) 659
BsuRI GGCC 4 cut(s) 44, 83, 786, 863
BtgI CCRYGG 2 cut(s) 78, 926
BtsCI GGATG 3 cut(s) 239, 475, 697
BtsIMutI CAGTG 3 cut(s) 490, 566, 1052
BtuMI TCGCGA 1 cut(s) 360
BveI ACCTGC 2 cut(s) 596, 836
Cac8I GCNNGC 2 cut(s) 807, 1135
CfoI GCGC 1 cut(s) 308
Cfr10I RCCGGY 1 cut(s) 106
Cfr13I GGNCC 2 cut(s) 784, 862
Cfr42I CCGCGG 1 cut(s) 81
CseI GACGC 4 cut(s) 68, 112, 303, 307
Csp6I GTAC 4 cut(s) 277, 331, 497, 952
CviAII CATG 9 cut(s) 437, 494, 802, 806, 892, 927, 1022, 1172, 1183
CviQI GTAC 4 cut(s) 277, 331, 497, 952
DdeI CTNAG 4 cut(s) 267, 821, 897, 958
DpnI GATC 9 cut(s) 19, 68, 87, 177, 357, 363, 659, 669, 693
DpnII GATC 9 cut(s) 17, 66, 85, 175, 355, 361, 657, 667, 691
EaeI YGGCCR 2 cut(s) 42, 81
EagI CGGCCG 1 cut(s) 81
Eam1104I CTCTTC 3 cut(s) 455, 633, 897
EarI CTCTTC 3 cut(s) 455, 633, 897
EciI GGCGGA 2 cut(s) 20, 143
EclXI CGGCCG 1 cut(s) 81
Eco130I CCWWGG 1 cut(s) 926
Eco32I GATATC 1 cut(s) 733
Eco52I CGGCCG 1 cut(s) 81
EcoRII CCWGG 2 cut(s) 673, 886
EcoRV GATATC 1 cut(s) 733
EcoT14I CCWWGG 1 cut(s) 926
EcoT22I ATGCAT 3 cut(s) 477, 807, 1173
ErhI CCWWGG 1 cut(s) 926
Esp3I CGTCTC 2 cut(s) 142, 290
FaeI CATG 9 cut(s) 440, 497, 805, 809, 895, 930, 1025, 1175, 1186
FaqI GGGAC 2 cut(s) 71, 527
FatI CATG 9 cut(s) 436, 493, 801, 805, 891, 926, 1021, 1171, 1182
FauNDI CATATG 1 cut(s) 664
FbaI TGATCA 1 cut(s) 657
FblI GTMKAC 1 cut(s) 610
Fnu4HI GCNGC 6 cut(s) 78, 81, 117, 251, 816, 852
FokI GGATG 3 cut(s) 246, 462, 684
Fsp4HI GCNGC 6 cut(s) 78, 81, 117, 251, 816, 852
GlaI GCGC 1 cut(s) 307
GluI GCNGC 6 cut(s) 78, 81, 117, 251, 816, 852
GsaI CCCAGC 3 cut(s) 548, 705, 785
HaeIII GGCC 4 cut(s) 44, 83, 786, 863
HapII CCGG 6 cut(s) 107, 141, 152, 350, 365, 614
HgaI GACGC 4 cut(s) 68, 112, 303, 307
HhaI GCGC 1 cut(s) 308
Hin1I GRCGYC 2 cut(s) 104, 299
Hin1II CATG 9 cut(s) 440, 497, 805, 809, 895, 930, 1025, 1175, 1186
Hin6I GCGC 1 cut(s) 306
HinP1I GCGC 1 cut(s) 306
HindIII AAGCTT 2 cut(s) 290, 1003
HinfI GANTC 8 cut(s) 96, 211, 272, 385, 709, 1125, 1189, 1203
HpaII CCGG 6 cut(s) 107, 141, 152, 350, 365, 614
HphI GGTGA 3 cut(s) 22, 394, 1124
Hpy166II GTNNAC 1 cut(s) 611
Hpy188I TCNGA 4 cut(s) 71, 95, 163, 561
Hpy188III TCNNGA 7 cut(s) 100, 359, 506, 530, 597, 833, 1014
Hpy8I GTNNAC 1 cut(s) 611
Hpy99I CGWCG 3 cut(s) 106, 127, 319
HpyAV CCTTC 5 cut(s) 166, 507, 933, 1107, 1115
HpyCH4IV ACGT 1 cut(s) 135
HpyF10VI GCNNNNNNNGC 7 cut(s) 125, 298, 413, 806, 815, 851, 860
HpyF3I CTNAG 4 cut(s) 267, 821, 897, 958
HpySE526I ACGT 1 cut(s) 135
Hsp92I GRCGYC 2 cut(s) 104, 299
Hsp92II CATG 9 cut(s) 440, 497, 805, 809, 895, 930, 1025, 1175, 1186
HspAI GCGC 1 cut(s) 306
Ksp22I TGATCA 1 cut(s) 657
KspI CCGCGG 1 cut(s) 81
Kzo9I GATC 9 cut(s) 17, 66, 85, 175, 355, 361, 657, 667, 691
LmnI GCTCC 3 cut(s) 154, 580, 797
Lsp1109I GCAGC 4 cut(s) 128, 262, 802, 863
LweI GCATC 2 cut(s) 462, 484
MaeII ACGT 1 cut(s) 135
MaeIII GTNAC 1 cut(s) 32
MalI GATC 9 cut(s) 19, 68, 87, 177, 357, 363, 659, 669, 693
MboI GATC 9 cut(s) 17, 66, 85, 175, 355, 361, 657, 667, 691
MboII GAAGA 5 cut(s) 472, 650, 662, 776, 914
MflI RGATCY 1 cut(s) 66
MlsI TGGCCA 1 cut(s) 44
MluCI AATT 6 cut(s) 618, 870, 1029, 1079, 1086, 1208
MluNI TGGCCA 1 cut(s) 44
MlyI GAGTC 2 cut(s) 266, 1212
Mox20I TGGCCA 1 cut(s) 44
Mph1103I ATGCAT 3 cut(s) 477, 807, 1173
MroXI GAANNNNTTC 1 cut(s) 26
MscI TGGCCA 1 cut(s) 44
MseI TTAA 5 cut(s) 183, 621, 714, 873, 1076
MslI CAYNNNNRTG 1 cut(s) 792
Msp20I TGGCCA 1 cut(s) 44
MspA1I CMGCKG 1 cut(s) 80
MspI CCGG 6 cut(s) 107, 141, 152, 350, 365, 614
MspR9I CCNGG 3 cut(s) 615, 675, 888
MvaI CCWGG 2 cut(s) 675, 888
MvnI CGCG 2 cut(s) 80, 360
MwoI GCNNNNNNNGC 7 cut(s) 125, 298, 413, 806, 815, 851, 860
NciI CCSGG 1 cut(s) 615
NcoI CCATGG 1 cut(s) 926
NdeI CATATG 1 cut(s) 664
NdeII GATC 9 cut(s) 17, 66, 85, 175, 355, 361, 657, 667, 691
NlaIII CATG 9 cut(s) 440, 497, 805, 809, 895, 930, 1025, 1175, 1186
NlaIV GGNNCC 4 cut(s) 68, 799, 864, 924
NmuCI GTSAC 1 cut(s) 32
NruI TCGCGA 1 cut(s) 360
NsiI ATGCAT 3 cut(s) 477, 807, 1173
NspI RCATGY 1 cut(s) 809
OliI CACNNNNGTG 1 cut(s) 792
PaeI GCATGC 1 cut(s) 809
PaqCI CACCTGC 1 cut(s) 836
PcsI WCGNNNNNNNCGW 1 cut(s) 81
PdmI GAANNNNTTC 1 cut(s) 26
PfeI GAWTC 6 cut(s) 96, 211, 385, 709, 1125, 1189
PkrI GCNGC 6 cut(s) 79, 82, 118, 252, 817, 853
PleI GAGTC 2 cut(s) 266, 1211
PpsI GAGTC 2 cut(s) 266, 1211
PshBI ATTAAT 1 cut(s) 873
PsiI TTATAA 2 cut(s) 1107, 1223
Psp6I CCWGG 2 cut(s) 673, 886
PspFI CCCAGC 3 cut(s) 544, 701, 781
PspGI CCWGG 2 cut(s) 673, 886
PspN4I GGNNCC 4 cut(s) 68, 799, 864, 924
PspPI GGNCC 2 cut(s) 784, 862
PsuI RGATCY 1 cut(s) 66
RruI TCGCGA 1 cut(s) 360
RsaI GTAC 4 cut(s) 278, 332, 498, 953
RsaNI GTAC 4 cut(s) 277, 331, 497, 952
RseI CAYNNNNRTG 1 cut(s) 792
SacII CCGCGG 1 cut(s) 81
SaqAI TTAA 5 cut(s) 183, 621, 714, 873, 1076
SatI GCNGC 6 cut(s) 78, 81, 117, 251, 816, 852
Sau3AI GATC 9 cut(s) 17, 66, 85, 175, 355, 361, 657, 667, 691
Sau96I GGNCC 2 cut(s) 784, 862
SchI GAGTC 2 cut(s) 266, 1212
ScrFI CCNGG 3 cut(s) 615, 675, 888
SfaNI GCATC 2 cut(s) 462, 484
Sfr303I CCGCGG 1 cut(s) 81
SgrAI CRCCGGYG 1 cut(s) 106
SgrBI CCGCGG 1 cut(s) 81
SmiMI CAYNNNNRTG 1 cut(s) 792
SmlI CTYRAG 2 cut(s) 293, 790
SmoI CTYRAG 2 cut(s) 293, 790
SphI GCATGC 1 cut(s) 809
Sse9I AATT 6 cut(s) 618, 870, 1029, 1079, 1086, 1208
SsiI CCGC 5 cut(s) 5, 78, 80, 128, 652
SspI AATATT 1 cut(s) 1227
StyD4I CCNGG 3 cut(s) 613, 673, 886
StyI CCWWGG 1 cut(s) 926
TaiI ACGT 1 cut(s) 138
TaqI TCGA 3 cut(s) 20, 101, 451
TasI AATT 6 cut(s) 618, 870, 1029, 1079, 1086, 1208
TatI WGTACW 2 cut(s) 496, 951
TauI GCSGC 2 cut(s) 80, 83
TfiI GAWTC 6 cut(s) 96, 211, 385, 709, 1125, 1189
Tru1I TTAA 5 cut(s) 183, 621, 714, 873, 1076
Tru9I TTAA 5 cut(s) 183, 621, 714, 873, 1076
TscAI CASTG 3 cut(s) 490, 573, 1059
TseFI GTSAC 1 cut(s) 32
TseI GCWGC 4 cut(s) 116, 250, 815, 851
Tsp45I GTSAC 1 cut(s) 32
TspDTI ATGAA 5 cut(s) 388, 582, 897, 923, 1062
TspGWI ACGGA 1 cut(s) 20
TspRI CASTG 3 cut(s) 490, 573, 1059
VspI ATTAAT 1 cut(s) 873
XapI RAATTY 2 cut(s) 1079, 1086
XceI RCATGY 1 cut(s) 809
XmiI GTMKAC 1 cut(s) 610
XmnI GAANNNNTTC 1 cut(s) 26
Zsp2I ATGCAT 3 cut(s) 477, 807, 1173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.