Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0004419

Physical Location & Seq

Genomic Coordinates Forward (+)

11669594 .. 11675898

Gene Structure 6305 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1124200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2280 bp

ATGCGTGGAGGGCAGGTGCTGAGTGCCCAGACAGAGAAACACCGAGATCGCGCTCTTGAAAATGGCGGATCGTCATCCCAAACTCTCAATACTCTGAACCAGCTTTCATCGTCTTCCTCGTCGCTCTTCCCAGATCACCGACTTGCAGAGATGGCTGAGGCGGCGAAGGTTCTGTACATCGTGGTGGTGGACGAAGAGGACAAGAGAGAGAAAGGGAAGGAGTCCTTTCGCTATACGCGTCCTGTTTTGCAGAGTTCTCTGCAACTCATGGGCTGCAAGCCCCGCCACGCCTTCAAGATTAGCCAACGGGTTTTCGAATTGATAAGAAATGAGAGTTCATCTAATGTCTTGCTGCCAGAAGGAACAGAAAATGTTCCCCCTAGTAAAGATGAGGCTGGAAACCATTTGGGTTCAGGGAAAGATGATAGAAGCAAGAGTGTTCCTTTTGAATTGTACAAAGCACGCACGACTGTTGTGGTTAGGAGAAAAACCTTCTTAGATGTTGTTTGTGATGCTCTGGCTGAGTACAAGTATGTTGGTCCCAACCAGAGGGCAGACTTAGCTTTGGCATGCAGAATCAGGGAAAGGAAGGAATCTGTGACTGTACTGTTGTGTGGCACTAGTGGCTGTGGAAAATCTACTTTGTCCTCATTGCTGGGTAGCAGGTTGGGAATTACAACTGTGATATCTACCGACTCAATTCGGCACATGATGAGGAGCTTTGTAGATGAAAAGGAAAACCCTCTGCTATGGGCTTCAACCTATCATGCAGGGGAGTGTCTGGATCCAGTGGCTGTTGCAGAAGCCAAAGCTAAAAAGAAAGCCAAAAAATTGGCAGGAACTCCACACTCACTTCCCAAAGATGGGATGCCTGATGGCTCTGCCTTTGGGAAATCTGATACCCGATTGTCAGATGTCGGTTCGAGTACTGCTGAATTGATCAGCCCAAAGCAGATGGCTGTTGAAGGGTTTAAGGCTCAAAGTGAGATGGTGATTGACAGTCTTGATCGCCTTATCACTGCGTGGGAGGAACGGAGAGAATCAGTTATCGTGGAAGGTGTTCACTTGAGCCTTAATTTTGTGATGGGGCTTATGAAGAAACACCCTTCTATCATTCCATTCATGATATACATTACAAATGAGGACAAACACATGGAACGATTTGCTGTCCGTGCAAAGTATATGACACTGGACCCAACAAAGAACAAATATGTGAAGTATATCCGTAACATCAGAACAATCCAAGAATATCTCTGTAAGCGAGCTGACAAGCATCTTGTCCCCAAAATTAACAATACTAATGTTGACAAGAGTGTGGCAGCCATCCATGCAACAGTTTTTAGCTGCCTCCGTAGGCGTGAAGCAGGGGAGCAACTTTGTGATCCCACAAGAAACACAGTTACTGTAGTGGATGAGGAGTATAGGAACCAGTGTGCAGCCAATTCTTTGAGTTCTAAGGGGATGTTTCAGCTGATCCAGAGAAAAGGTTCGTCTAGGCATTTGATGGCTCTTGTAAATACTGATGGATCTGTGGCCAAGGCTTGGCCTATTGATTCAGTTAATAGTAATGGGAAGCCTATATTTTGCCATGGGACTGAGATGGAGATTGGAACCGCAGAGCAAGTGAATCTTCAGTTTGGTCTCTATGGGATCAGTGCTTGGCCCAGTGATGGTGGACCTAGTTGTGCTGGAAGTGTTGATGAGTCGAGGGGTGAGGGAACTGAGATTGGAAGAAGTATTCCCTCTTCTTGCTGCAGCTCCCCACGGATGTCTGAGGGACCTGCCAAAGAGCTGAAGGAGGACAATTCAGTGCATGGAAGTGACGAAGAGGTTGAAGAAGAGGCTGATGTAGGCAGTGATGAAGAACTAAGTGATGACGGTGACAAACGACTGTATGAAGAGATAGGGTCGGTGGATGAGGAGTCTACGAAAACGGATGAAGAGTATGATGACTTAGCAATGCAGGACGTGCAGGGAAATGGATACTGGTTGGAGAATGATGATCGGGGAGCTAATCACCCCATTTCTGAGGATCAATCAGCCGATAAAGAAGGGGATAAGTATCGCCAGAACCTGGATCTCTTCCTTAGAACTAGATCAGAGTCATTTTCTGAACCATTCTGCTCATACTCTTCTGTGTTTATTGAGAAGAATGAGCTTTCAATGCCGTGCTCTGGCAATATGAAAATTAGAAAACGCCGCTCCCTTAGCATTCCCGCCTTGGGAAGGCACGGGTCATTAGTCGGGGGTCCCATACTTTCGGGAGCCCCTCAGTGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006066 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009058 GO:0009987 GO:0010264 GO:0017144 GO:0019637 GO:0019751 GO:0032958 GO:0033517 GO:0043647 GO:0044237 GO:0044281 GO:0044283 GO:0046165 GO:0046173 GO:0071704 GO:0090407 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA_33

Protein Analysis

760

Amino Acids

83.8

Weight (kDa)

5.9

Isoelectric Point (pI)

45.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004419)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45090 AT3G45090 AT5G60760 AT5G60760
fragaria_vesca	FvH4_3g31410 FvH4_3g31410 FvH4_3g31410 FvH4_3g31410 FvH4_3g31410 FvH4_3g31410
malus_domestica	MD03G1124200.v1.1 MD11G1141200.v1.1
prunus_persica	Prupe.6G106900_v2.0.a1 Prupe.6G106900_v2.0.a1 Prupe.6G106900_v2.0.a1
pyrus_communis	pycom11g11720 pycom11g11730 pycom11g11740
rosa_chinensis	RchiOBHm_Chr5g0058141
rosa_laevigata	RLG00000035194
rosa_multiflora	Rmu_sc0000367.1_g000014
rosa_roxburghii	Rroxscaffold_1G00022450
rosa_rugosa	Rorug05G0311300 Rorug05G0311400 Rorug05G0311500
rosa_samantha	Rh5AG379700 Rh5BG390800 Rh5CG414800 Rh5DG405500 Rh7BG226800 Rh7BG226900
rosa_wichuraiana	Rw5G035740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	4
Acc36I	ACCTGC	3 cut(s)	4, 654, 1789
AccB7I	CCANNNNNTGG	2 cut(s)	1542, 2074
AccBSI	CCGCTC	1 cut(s)	2202
AccI	GTMKAC	1 cut(s)	1925
AccII	CGCG	2 cut(s)	51, 238
AciI	CCGC	6 cut(s)	66, 161, 283, 1614, 2200, 2217
AclWI	GGATC	9 cut(s)	76, 779, 792, 1376, 1468, 1534, 1658, 2040, 2085
AcoI	YGGCCR	1 cut(s)	1533
AcuI	CTGAAG	2 cut(s)	1616, 1814
AdeI	CACNNNGTG	1 cut(s)	1023
AfaI	GTAC	5 cut(s)	176, 455, 527, 606, 928
AfiI	CCNNNNNNNGG	9 cut(s)	549, 863, 864, 1542, 1670, 2074, 2174, 2222, 2226
AflIII	ACRYGT	1 cut(s)	236
AgsI	TTSAA	7 cut(s)	59, 295, 449, 759, 965, 1835, 2163
AhlI	ACTAGT	1 cut(s)	620
AjiI	CACGTC	1 cut(s)	1969
AjnI	CCWGG	1 cut(s)	2073
Alw21I	GWGCWC	1 cut(s)	2174
Alw26I	GTCTC	1 cut(s)	1646
AlwI	GGATC	9 cut(s)	76, 779, 792, 1376, 1468, 1534, 1658, 2040, 2085
AlwNI	CAGNNNCTG	4 cut(s)	19, 794, 1403, 2074
AoxI	GGCC	3 cut(s)	1533, 1544, 1661
ApeKI	GCWGC	7 cut(s)	273, 352, 1319, 1344, 1436, 1752, 1755
Asp700I	GAANNNNTTC	3 cut(s)	372, 1059, 1486
AspLEI	GCGC	1 cut(s)	53
AspS9I	GGNCC	6 cut(s)	539, 1192, 1662, 1676, 1778, 2249
AsuHPI	GGTGA	5 cut(s)	128, 1003, 1724, 1892, 2009
AsuII	TTCGAA	1 cut(s)	315
AvaII	GGWCC	5 cut(s)	539, 1192, 1676, 1778, 2249
BaeGI	GKGCMC	1 cut(s)	28
BalI	TGGCCA	1 cut(s)	1535
BamHI	GGATCC	1 cut(s)	784
BanII	GRGCYC	1 cut(s)	2269
BarI	GAAGNNNNNNTAC	4 cut(s)	158, 190, 1729, 1761
BbsI	GAAGAC	1 cut(s)	105
Bbv12I	GWGCWC	1 cut(s)	2174
BbvCI	CCTCAGC	1 cut(s)	156
BbvI	GCAGC	7 cut(s)	260, 339, 1331, 1331, 1448, 1739, 1767
BceAI	ACGGC	1 cut(s)	2152
BciT130I	CCWGG	1 cut(s)	2075
BciVI	GTATCC	1 cut(s)	1976
BclI	TGATCA	1 cut(s)	939
BcoDI	GTCTC	1 cut(s)	1646
BcuI	ACTAGT	1 cut(s)	620
BfaI	CTAG	5 cut(s)	381, 621, 1494, 1680, 2094
BfmI	CTRYAG	2 cut(s)	1404, 1753
BfuAI	ACCTGC	3 cut(s)	4, 654, 1789
BfuI	GTATCC	1 cut(s)	1976
BisI	GCNGC	9 cut(s)	162, 274, 353, 1320, 1345, 1437, 1753, 1756, 2200
BlsI	GCNGC	9 cut(s)	163, 275, 354, 1321, 1346, 1438, 1754, 1757, 2201
BmcAI	AGTACT	1 cut(s)	928
Bme1390I	CCNGG	1 cut(s)	2075
Bme18I	GGWCC	5 cut(s)	539, 1192, 1676, 1778, 2249
BmgBI	CACGTC	1 cut(s)	1969
BmgT120I	GGNCC	6 cut(s)	539, 1192, 1662, 1676, 1778, 2249
BmiI	GGNNCC	9 cut(s)	541, 786, 1194, 1427, 1612, 1779, 2250, 2251, 2266
BmrFI	CCNGG	1 cut(s)	2075
BmrI	ACTGGG	1 cut(s)	1659
BmsI	GCATC	3 cut(s)	502, 858, 1282
BmuI	ACTGGG	1 cut(s)	1659
BpiI	GAAGAC	1 cut(s)	105
Bpu10I	CCTNAGC	2 cut(s)	156, 2207
Bpu14I	TTCGAA	1 cut(s)	315
BpuEI	CTTGAG	1 cut(s)	1087
BsaBI	GATNNNNATC	2 cut(s)	73, 2061
BsaI	GGTCTC	1 cut(s)	1646
BsaJI	CCNNGG	4 cut(s)	1536, 1588, 1763, 2220
BsaXI	ACNNNNNCTCC	1 cut(s)	30
Bsc4I	CCNNNNNNNGG	9 cut(s)	549, 863, 864, 1542, 1670, 2074, 2174, 2222, 2226
Bse1I	ACTGG	5 cut(s)	788, 1194, 1429, 1665, 1991
Bse3DI	GCAATG	2 cut(s)	650, 1965
Bse8I	GATNNNNATC	2 cut(s)	73, 2061
BseBI	CCWGG	1 cut(s)	2075
BseDI	CCNNGG	4 cut(s)	1536, 1588, 1763, 2220
BseGI	GGATG	8 cut(s)	74, 873, 1323, 1417, 1467, 1773, 1921, 1942
BseJI	GATNNNNATC	2 cut(s)	73, 2061
BseLI	CCNNNNNNNGG	9 cut(s)	549, 863, 864, 1542, 1670, 2074, 2174, 2222, 2226
BseMI	GCAATG	2 cut(s)	650, 1965
BseMII	CTCAG	7 cut(s)	11, 147, 513, 1587, 1713, 1764, 2019
BseNI	ACTGG	5 cut(s)	788, 1194, 1429, 1665, 1991
BseRI	GAGGAG	3 cut(s)	730, 1430, 1934
BseSI	GKGCMC	1 cut(s)	28
BseXI	GCAGC	7 cut(s)	260, 339, 1331, 1331, 1448, 1739, 1767
BseYI	CCCAGC	1 cut(s)	655
BsgI	GTGCAG	2 cut(s)	1455, 1991
Bsh1236I	CGCG	2 cut(s)	51, 238
BshFI	GGCC	3 cut(s)	1535, 1546, 1663
BsiHKAI	GWGCWC	1 cut(s)	2174
BslFI	GGGAC	5 cut(s)	525, 1265, 1606, 1791, 2235
BslI	CCNNNNNNNGG	9 cut(s)	549, 863, 864, 1542, 1670, 2074, 2174, 2222, 2226
BsmAI	GTCTC	1 cut(s)	1646
BsmFI	GGGAC	5 cut(s)	525, 1265, 1606, 1791, 2235
BsmI	GAATGC	1 cut(s)	2211
BsnI	GGCC	3 cut(s)	1535, 1546, 1663
Bso31I	GGTCTC	1 cut(s)	1646
Bsp119I	TTCGAA	1 cut(s)	315
Bsp1286I	GDGCHC	3 cut(s)	28, 2174, 2269
Bsp1407I	TGTACA	2 cut(s)	174, 453
Bsp19I	CCATGG	1 cut(s)	1588
BspACI	CCGC	6 cut(s)	66, 161, 283, 1614, 2200, 2217
BspANI	GGCC	3 cut(s)	1535, 1546, 1663
BspCNI	CTCAG	7 cut(s)	12, 148, 514, 1588, 1714, 1765, 2020
BspFNI	CGCG	2 cut(s)	51, 238
BspHI	TCATGA	1 cut(s)	1122
BspLI	GGNNCC	9 cut(s)	541, 786, 1194, 1427, 1612, 1779, 2250, 2251, 2266
BspMAI	CTGCAG	1 cut(s)	1757
BspMI	ACCTGC	3 cut(s)	4, 654, 1789
BspPI	GGATC	9 cut(s)	76, 779, 792, 1376, 1468, 1534, 1658, 2040, 2085
BspQI	GCTCTTC	1 cut(s)	131
BspT104I	TTCGAA	1 cut(s)	315
BspTNI	GGTCTC	1 cut(s)	1646
BsrBI	CCGCTC	1 cut(s)	2202
BsrDI	GCAATG	2 cut(s)	650, 1965
BsrGI	TGTACA	2 cut(s)	174, 453
BsrI	ACTGG	5 cut(s)	788, 1194, 1429, 1665, 1991
BssECI	CCNNGG	4 cut(s)	1536, 1588, 1763, 2220
BssT1I	CCWWGG	3 cut(s)	1536, 1588, 2220
Bst2UI	CCWGG	1 cut(s)	2075
Bst6I	CTCTTC	9 cut(s)	131, 189, 1750, 1821, 1833, 1893, 1935, 2087, 2137
BstAPI	GCANNNNNTGC	1 cut(s)	1969
BstAUI	TGTACA	2 cut(s)	174, 453
BstBI	TTCGAA	1 cut(s)	315
BstC8I	GCNNGC	4 cut(s)	278, 463, 571, 1263
BstDSI	CCRYGG	2 cut(s)	1588, 1763
BstENI	CCTNNNNNAGG	1 cut(s)	2224
BstF5I	GGATG	8 cut(s)	74, 873, 1323, 1417, 1467, 1773, 1921, 1942
BstFNI	CGCG	2 cut(s)	51, 238
BstHHI	GCGC	1 cut(s)	53
BstMAI	GTCTC	1 cut(s)	1646
BstNI	CCWGG	1 cut(s)	2075
BstNSI	RCATGY	1 cut(s)	573
BstSCI	CCNGG	1 cut(s)	2073
BstSFI	CTRYAG	2 cut(s)	1404, 1753
BstSLI	GKGCMC	1 cut(s)	28
BstUI	CGCG	2 cut(s)	51, 238
BstV1I	GCAGC	7 cut(s)	260, 339, 1331, 1331, 1448, 1739, 1767
BstV2I	GAAGAC	1 cut(s)	105
BstX2I	RGATCY	3 cut(s)	784, 1526, 2077
BstXI	CCANNNNNNTGG	1 cut(s)	832
BstYI	RGATCY	3 cut(s)	784, 1526, 2077
BsuI	GTATCC	1 cut(s)	1976
BsuRI	GGCC	3 cut(s)	1535, 1546, 1663
BtgI	CCRYGG	2 cut(s)	1588, 1763
BtrI	CACGTC	1 cut(s)	1969
BtsCI	GGATG	8 cut(s)	74, 873, 1323, 1417, 1467, 1773, 1921, 1942
BtsI	GCAGTG	2 cut(s)	1017, 1861
BtsIMutI	CAGTG	9 cut(s)	795, 1017, 1187, 1436, 1660, 1672, 1815, 1861, 2279
BveI	ACCTGC	3 cut(s)	4, 654, 1789
Cac8I	GCNNGC	4 cut(s)	278, 463, 571, 1263
CaiI	CAGNNNCTG	4 cut(s)	19, 794, 1403, 2074
CciI	TCATGA	1 cut(s)	1122
CfoI	GCGC	1 cut(s)	53
Cfr13I	GGNCC	6 cut(s)	539, 1192, 1662, 1676, 1778, 2249
CseI	GACGC	1 cut(s)	227
Csp6I	GTAC	5 cut(s)	175, 454, 526, 605, 927
CviAII	CATG	9 cut(s)	268, 570, 709, 767, 1123, 1153, 1328, 1589, 1814
CviQI	GTAC	5 cut(s)	175, 454, 526, 605, 927
DraIII	CACNNNGTG	1 cut(s)	1023
EaeI	YGGCCR	1 cut(s)	1533
Eam1104I	CTCTTC	9 cut(s)	131, 189, 1750, 1821, 1833, 1893, 1935, 2087, 2137
EarI	CTCTTC	9 cut(s)	131, 189, 1750, 1821, 1833, 1893, 1935, 2087, 2137
EciI	GGCGGA	1 cut(s)	81
Eco130I	CCWWGG	3 cut(s)	1536, 1588, 2220
Eco24I	GRGCYC	1 cut(s)	2269
Eco31I	GGTCTC	1 cut(s)	1646
Eco32I	GATATC	1 cut(s)	687
Eco47I	GGWCC	5 cut(s)	539, 1192, 1676, 1778, 2249
Eco57I	CTGAAG	2 cut(s)	1616, 1814
EcoNI	CCTNNNNNAGG	1 cut(s)	2224
EcoO109I	RGGNCCY	2 cut(s)	1778, 2249
EcoRII	CCWGG	1 cut(s)	2073
EcoRV	GATATC	1 cut(s)	687
EcoT14I	CCWWGG	3 cut(s)	1536, 1588, 2220
EcoT38I	GRGCYC	1 cut(s)	2269
ErhI	CCWWGG	3 cut(s)	1536, 1588, 2220
FaeI	CATG	9 cut(s)	271, 573, 712, 770, 1126, 1156, 1331, 1592, 1817
FalI	AAGNNNNNCTT	4 cut(s)	209, 241, 1614, 1646
FaqI	GGGAC	5 cut(s)	525, 1265, 1606, 1791, 2235
FatI	CATG	9 cut(s)	267, 569, 708, 766, 1122, 1152, 1327, 1588, 1813
FauI	CCCGC	2 cut(s)	290, 2224
FbaI	TGATCA	1 cut(s)	939
FblI	GTMKAC	1 cut(s)	1925
Fnu4HI	GCNGC	9 cut(s)	162, 274, 353, 1320, 1345, 1437, 1753, 1756, 2200
FokI	GGATG	8 cut(s)	61, 880, 1310, 1424, 1474, 1780, 1928, 1949
FriOI	GRGCYC	1 cut(s)	2269
Fsp4HI	GCNGC	9 cut(s)	162, 274, 353, 1320, 1345, 1437, 1753, 1756, 2200
FspBI	CTAG	5 cut(s)	381, 621, 1494, 1680, 2094
GlaI	GCGC	1 cut(s)	52
GluI	GCNGC	9 cut(s)	162, 274, 353, 1320, 1345, 1437, 1753, 1756, 2200
GsaI	CCCAGC	1 cut(s)	659
HaeIII	GGCC	3 cut(s)	1535, 1546, 1663
HgaI	GACGC	1 cut(s)	227
HhaI	GCGC	1 cut(s)	53
Hin1II	CATG	9 cut(s)	271, 573, 712, 770, 1126, 1156, 1331, 1592, 1817
Hin6I	GCGC	1 cut(s)	51
HinP1I	GCGC	1 cut(s)	51
HincII	GTYRAC	1 cut(s)	1306
HindII	GTYRAC	1 cut(s)	1306
HphI	GGTGA	5 cut(s)	128, 1003, 1724, 1892, 2009
Hpy166II	GTNNAC	5 cut(s)	190, 1063, 1306, 1676, 1926
Hpy188I	TCNGA	8 cut(s)	96, 898, 913, 1235, 1774, 2029, 2101, 2113
Hpy188III	TCNNGA	7 cut(s)	56, 295, 782, 1004, 1123, 1477, 2262
Hpy8I	GTNNAC	5 cut(s)	190, 1063, 1306, 1676, 1926
Hpy99I	CGWCG	1 cut(s)	124
HpyCH4IV	ACGT	1 cut(s)	1968
HpySE526I	ACGT	1 cut(s)	1968
Hsp92II	CATG	9 cut(s)	271, 573, 712, 770, 1126, 1156, 1331, 1592, 1817
HspAI	GCGC	1 cut(s)	51
KflI	GGGWCCC	1 cut(s)	2249
Ksp22I	TGATCA	1 cut(s)	939
LguI	GCTCTTC	1 cut(s)	131
LmnI	GCTCC	6 cut(s)	717, 1369, 1763, 2009, 2207, 2264
Lsp1109I	GCAGC	7 cut(s)	260, 339, 1331, 1331, 1448, 1739, 1767
LweI	GCATC	3 cut(s)	502, 858, 1282
MaeI	CTAG	5 cut(s)	381, 621, 1494, 1680, 2094
MaeII	ACGT	1 cut(s)	1968
MaeIII	GTNAC	5 cut(s)	598, 1226, 1399, 1820, 1880
MbiI	CCGCTC	1 cut(s)	2202
MflI	RGATCY	3 cut(s)	784, 1526, 2077
MhlI	GDGCHC	3 cut(s)	28, 2174, 2269
MlsI	TGGCCA	1 cut(s)	1535
MluI	ACGCGT	1 cut(s)	236
MluNI	TGGCCA	1 cut(s)	1535
MlyI	GAGTC	5 cut(s)	230, 689, 1712, 1931, 2111
MmeI	TCCRAC	1 cut(s)	1971
Mox20I	TGGCCA	1 cut(s)	1535
MroXI	GAANNNNTTC	3 cut(s)	372, 1059, 1486
MscI	TGGCCA	1 cut(s)	1535
MseI	TTAA	4 cut(s)	972, 1074, 1290, 1560
MslI	CAYNNNNRTG	2 cut(s)	182, 1818
Msp20I	TGGCCA	1 cut(s)	1535
MspA1I	CMGCKG	1 cut(s)	1471
MspR9I	CCNGG	1 cut(s)	2075
Mva1269I	GAATGC	1 cut(s)	2211
MvaI	CCWGG	1 cut(s)	2075
MvnI	CGCG	2 cut(s)	51, 238
NcoI	CCATGG	1 cut(s)	1588
NlaIII	CATG	9 cut(s)	271, 573, 712, 770, 1126, 1156, 1331, 1592, 1817
NlaIV	GGNNCC	9 cut(s)	541, 786, 1194, 1427, 1612, 1779, 2250, 2251, 2266
NmuCI	GTSAC	3 cut(s)	598, 1820, 1880
NspI	RCATGY	1 cut(s)	573
NspV	TTCGAA	1 cut(s)	315
PaeI	GCATGC	1 cut(s)	573
PagI	TCATGA	1 cut(s)	1122
PaqCI	CACCTGC	1 cut(s)	4
PciSI	GCTCTTC	1 cut(s)	131
PcsI	WCGNNNNNNNCGW	2 cut(s)	116, 235
PctI	GAATGC	1 cut(s)	2211
PdmI	GAANNNNTTC	3 cut(s)	372, 1059, 1486
PfeI	GAWTC	5 cut(s)	576, 593, 1040, 1553, 1627
PflMI	CCANNNNNTGG	2 cut(s)	1542, 2074
PkrI	GCNGC	9 cut(s)	163, 275, 354, 1321, 1346, 1438, 1754, 1757, 2201
PleI	GAGTC	5 cut(s)	229, 689, 1711, 1930, 2110
PpsI	GAGTC	5 cut(s)	229, 689, 1711, 1930, 2110
PpuMI	RGGWCCY	2 cut(s)	1778, 2249
Psp5II	RGGWCCY	2 cut(s)	1778, 2249
Psp6I	CCWGG	1 cut(s)	2073
PspFI	CCCAGC	1 cut(s)	655
PspGI	CCWGG	1 cut(s)	2073
PspN4I	GGNNCC	9 cut(s)	541, 786, 1194, 1427, 1612, 1779, 2250, 2251, 2266
PspPI	GGNCC	6 cut(s)	539, 1192, 1662, 1676, 1778, 2249
PspPPI	RGGWCCY	2 cut(s)	1778, 2249
PstI	CTGCAG	1 cut(s)	1757
PstNI	CAGNNNCTG	4 cut(s)	19, 794, 1403, 2074
PsuI	RGATCY	3 cut(s)	784, 1526, 2077
PvuII	CAGCTG	1 cut(s)	1471
RsaI	GTAC	5 cut(s)	176, 455, 527, 606, 928
RsaNI	GTAC	5 cut(s)	175, 454, 526, 605, 927
RseI	CAYNNNNRTG	2 cut(s)	182, 1818
SapI	GCTCTTC	1 cut(s)	131
SaqAI	TTAA	4 cut(s)	972, 1074, 1290, 1560
SatI	GCNGC	9 cut(s)	162, 274, 353, 1320, 1345, 1437, 1753, 1756, 2200
Sau96I	GGNCC	6 cut(s)	539, 1192, 1662, 1676, 1778, 2249
ScaI	AGTACT	1 cut(s)	928
SchI	GAGTC	5 cut(s)	230, 689, 1712, 1931, 2111
ScrFI	CCNGG	1 cut(s)	2075
SduI	GDGCHC	3 cut(s)	28, 2174, 2269
SfaNI	GCATC	3 cut(s)	502, 858, 1282
SfcI	CTRYAG	2 cut(s)	1404, 1753
SfuI	TTCGAA	1 cut(s)	315
SinI	GGWCC	5 cut(s)	539, 1192, 1676, 1778, 2249
SmiMI	CAYNNNNRTG	2 cut(s)	182, 1818
SmlI	CTYRAG	1 cut(s)	1066
SmoI	CTYRAG	1 cut(s)	1066
SpeI	ACTAGT	1 cut(s)	620
SphI	GCATGC	1 cut(s)	573
SsiI	CCGC	6 cut(s)	66, 161, 283, 1614, 2200, 2217
SspMI	CTAG	5 cut(s)	381, 621, 1494, 1680, 2094
StyD4I	CCNGG	1 cut(s)	2073
StyI	CCWWGG	3 cut(s)	1536, 1588, 2220
TaiI	ACGT	1 cut(s)	1971
TaqI	TCGA	3 cut(s)	315, 923, 1706
TatI	WGTACW	5 cut(s)	174, 453, 525, 604, 926
TauI	GCSGC	2 cut(s)	164, 2202
TfiI	GAWTC	5 cut(s)	576, 593, 1040, 1553, 1627
Tru1I	TTAA	4 cut(s)	972, 1074, 1290, 1560
Tru9I	TTAA	4 cut(s)	972, 1074, 1290, 1560
TscAI	CASTG	9 cut(s)	795, 1024, 1194, 1436, 1660, 1672, 1815, 1861, 2279
TseFI	GTSAC	3 cut(s)	598, 1820, 1880
TseI	GCWGC	7 cut(s)	273, 352, 1319, 1344, 1436, 1752, 1755
Tsp45I	GTSAC	3 cut(s)	598, 1820, 1880
TspDTI	ATGAA	9 cut(s)	96, 327, 744, 1109, 1111, 1875, 1911, 1953, 2198
TspGWI	ACGGA	6 cut(s)	1048, 1160, 1214, 1340, 1780, 1949
TspRI	CASTG	9 cut(s)	795, 1024, 1194, 1436, 1660, 1672, 1815, 1861, 2279
Van91I	CCANNNNNTGG	2 cut(s)	1542, 2074
VpaK11BI	GGWCC	5 cut(s)	539, 1192, 1676, 1778, 2249
XagI	CCTNNNNNAGG	1 cut(s)	2224
XceI	RCATGY	1 cut(s)	573
XmiI	GTMKAC	1 cut(s)	1925
XmnI	GAANNNNTTC	3 cut(s)	372, 1059, 1486
XspI	CTAG	5 cut(s)	381, 621, 1494, 1680, 2094
ZrmI	AGTACT	1 cut(s)	928

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.