Rroxscaffold_1G00022450

P-loop NTPase domain-containing protein LPA1 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0004419
Physical Location & Seq
Forward (+)
27756856 .. 27763225
6370 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00022450.1

Sequence Viewer

Length: 1653 bp
ATGAGTGAGTCGGCGAAGGTTTTGTACATAGTGGTGGTGGATGGCGAGGAATCGAGAGAGGAAGGGAAGGAGTCTTTTCGATATACGCGTCCGGTTTTGCAGAGCTCTCTGCAACTCATGGGATGCAAACCTCGACACGCCTTCAAGATTAGTCAACGAGTTTTTGAATTGATAAGAAATGTAAGTTCATGTAATGCCTTGCTTCCGGACGGGACAGAGAATGTTTCCCCCAGTAAAGCTGAGGCTTGCAAGCATATGGTTTCAGGGAAAGATCATAGAAGTAAGAGTGTACCATTTGAAATGTACAAAACACGTACGACTGTTGTAGTTAGGAGAGAAACTTTCTTGGATGTTGTTTGTGATGCTCTGGCGGAGTACAAGTATGTTGGTCCAAATCAGAGGGCAGACTTAGTTTTGGCATGCAGAATTCGAGAACGGAAAGAATCTGTAACAGTACTGTTGTGTGGCACCAGTGGCTGTGGAAAATCTACTTTGTCTTCATTGCTGGGTAGTAGGTTGGGAATCACAACTGTGATATCTACCGACTCGATTCGGCACATGATGAGGAGTTTCGCAGATGAGAAGCAAAATCCTTTACTATGGGCTTCAACCTATCATGCAGGGGAGTGTTTAGATCCAGTGGCAGTTGCAGAAGCAAAAGCCAAAAAGAAAGCCAAAAAATCGGCTGGAAGTTCACATTCACTTTCTAAAGATGGAATAGTTGATGGCTCTATGTCAGACGCTGGTTCAAGTACTGCTGAATTGATCGGTCCAAAGCAGATGGCCATTGAAGGATTCAAGGCACAAAGTGAGATGGTAATTGACAGTCTTGACCGTCTTATTACTGCATGGGAGGAAAGAAAAGAATCAGTTATTGTAGAAGGCGTTCACTTAAGCCTTAATTTTGTGAGAAAAGGGTCATCTAGGCATCTGATGGCTCTTGTAAATACTGATGGATCTGTAGCAAAGGCTTGGCCTGTTGATTCAGTCGATCGTAATGGGAAGCCTATATTCTGCCATGGGACTGAGATGGAGATTGGCAGTGCAGCGCAAGTGAATCTTCAGTTTGGTCTCTATGGTTTAAGCGCTTGGCCCAAAGATGGTGGCCCAAGCTGTGCTGGAAGTGTTGATGGGTCAAGGGCTGATGATACTGAGACTCTGAAGGAGGACAACTCGGTGCATGGCAGCGATGAAGAGGTTGATGAATCAGCTGATGTAGGCAGTGATGAGGAATTAAGTGATGATGATGACAAGCAGGTTGAAGAAGAGGTAGGGTCAGTGGATGAGGAGTCTACGAAATCAGATGAAGAGTATGAAGACCTGGCAATGCAGGACGTTCAGGGGAATGGATACTGGTCAGATGATGCTACGGAGCGCAAGCTTAAGATATTCCCTGTTGCTGAGCACCCATCAGCCAATAAGGATGTGGATAAGTATCGCCAGAACCTGGATCTTTTCCTTAGAACTAGAAACGAGTCATTTTCTGAACCACTATGTTCATATACTTCTCTCTTTATGGAGAAGAATGAGATGACAATGCCATGCTCTGGCAATATGAAAATTAGAAAACGCCGGTCCCTTAGCATTCCAGCATTGGGAAGGCATGGGTCAAAAACAAGGGGTCCCATACTTTCTGGTGCCCCTCAGTGCTAA

Protein Analysis

550

Amino Acids

60.33

Weight (kDa)

5.39

Isoelectric Point (pI)

42.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_33 PF13671 152 - 198 5.2e-06 AAA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1246
AccB1I GGYRCC 2 cut(s) 467, 1637
AccB7I CCANNNNNTGG 2 cut(s) 1447, 1547
AccI GTMKAC 1 cut(s) 1292
AccII CGCG 1 cut(s) 88
AccIII TCCGGA 1 cut(s) 205
AciI CCGC 1 cut(s) 371
AclWI GGATC 3 cut(s) 629, 964, 1458
AcoI YGGCCR 1 cut(s) 783
AcsI RAATTY 1 cut(s) 426
AcuI CTGAAG 2 cut(s) 1046, 1181
AdeI CACNNNGTG 1 cut(s) 809
AfaI GTAC 7 cut(s) 26, 291, 305, 316, 377, 456, 754
AfeI AGCGCT 1 cut(s) 1087
AfiI CCNNNNNNNGG 4 cut(s) 1100, 1447, 1547, 1595
AflII CTTAAG 2 cut(s) 892, 1382
AflIII ACRYGT 2 cut(s) 86, 311
AgsI TTSAA 8 cut(s) 145, 167, 299, 609, 750, 791, 799, 1262
AjnI CCWGG 2 cut(s) 1320, 1446
AleI CACNNNNGTG 1 cut(s) 530
AluBI AGCT 5 cut(s) 105, 239, 1113, 1211, 1381
AluI AGCT 5 cut(s) 105, 239, 1113, 1211, 1381
Alw21I GWGCWC 2 cut(s) 107, 1407
Alw26I GTCTC 2 cut(s) 1076, 1148
AlwI GGATC 3 cut(s) 629, 964, 1458
AlwNI CAGNNNCTG 3 cut(s) 477, 743, 1447
Aor13HI TCCGGA 1 cut(s) 205
Aor51HI AGCGCT 1 cut(s) 1087
AoxI GGCC 4 cut(s) 783, 974, 1091, 1105
ApeKI GCWGC 2 cut(s) 1046, 1185
ApoI RAATTY 1 cut(s) 426
Asp700I GAANNNNTTC 1 cut(s) 885
AspLEI GCGC 3 cut(s) 1051, 1088, 1377
AspS9I GGNCC 6 cut(s) 389, 770, 1092, 1106, 1575, 1622
AvaII GGWCC 4 cut(s) 389, 770, 1575, 1622
BaeGI GKGCMC 1 cut(s) 1642
BalI TGGCCA 1 cut(s) 785
BanI GGYRCC 2 cut(s) 467, 1637
BanII GRGCYC 1 cut(s) 107
BarI GAAGNNNNNNTAC 2 cut(s) 8, 40
BbsI GAAGAC 2 cut(s) 489, 1323
Bbv12I GWGCWC 2 cut(s) 107, 1407
BbvCI CCTCAGC 1 cut(s) 240
BbvI GCAGC 2 cut(s) 1058, 1197
BciT130I CCWGG 2 cut(s) 1322, 1448
BciVI GTATCC 1 cut(s) 1343
BcoDI GTCTC 2 cut(s) 1076, 1148
BfaI CTAG 2 cut(s) 924, 1467
BfmI CTRYAG 1 cut(s) 960
BfoI RGCGCY 1 cut(s) 1089
BfrI CTTAAG 2 cut(s) 892, 1382
BfuAI ACCTGC 1 cut(s) 1246
BfuI GTATCC 1 cut(s) 1343
BisI GCNGC 2 cut(s) 1047, 1186
BlpI GCTNAGC 1 cut(s) 1401
BlsI GCNGC 2 cut(s) 1048, 1187
BmcAI AGTACT 2 cut(s) 456, 754
Bme1390I CCNGG 2 cut(s) 1322, 1448
Bme18I GGWCC 4 cut(s) 389, 770, 1575, 1622
BmgT120I GGNCC 6 cut(s) 389, 770, 1092, 1106, 1575, 1622
BmiI GGNNCC 5 cut(s) 469, 1577, 1623, 1624, 1639
BmrFI CCNGG 2 cut(s) 1322, 1448
BmrI ACTGGG 1 cut(s) 225
BmsI GCATC 4 cut(s) 113, 352, 937, 1354
BmuI ACTGGG 1 cut(s) 225
BpiI GAAGAC 2 cut(s) 489, 1323
BplI GAGNNNNNCTC 2 cut(s) 1157, 1189
Bpu10I CCTNAGC 2 cut(s) 240, 1580
Bpu1102I GCTNAGC 1 cut(s) 1401
BsaAI YACGTR 1 cut(s) 314
BsaBI GATNNNNATC 1 cut(s) 1434
BsaI GGTCTC 1 cut(s) 1076
BsaJI CCNNGG 1 cut(s) 1018
BsaWI WCCGGW 2 cut(s) 91, 205
BsaXI ACNNNNNCTCC 2 cut(s) 365, 395
Bsc4I CCNNNNNNNGG 4 cut(s) 1100, 1447, 1547, 1595
Bse118I RCCGGY 1 cut(s) 1572
Bse1I ACTGG 4 cut(s) 231, 471, 638, 1358
Bse3DI GCAATG 2 cut(s) 500, 1332
Bse8I GATNNNNATC 1 cut(s) 1434
BseAI TCCGGA 1 cut(s) 205
BseBI CCWGG 2 cut(s) 1322, 1448
BseDI CCNNGG 1 cut(s) 1018
BseGI GGATG 5 cut(s) 46, 128, 355, 1288, 1429
BseJI GATNNNNATC 1 cut(s) 1434
BseLI CCNNNNNNNGG 4 cut(s) 1100, 1447, 1547, 1595
BseMI GCAATG 2 cut(s) 500, 1332
BseMII CTCAG 4 cut(s) 231, 1017, 1143, 1392
BseNI ACTGG 4 cut(s) 231, 471, 638, 1358
BseRI GAGGAG 2 cut(s) 580, 1301
BseSI GKGCMC 1 cut(s) 1642
BseXI GCAGC 2 cut(s) 1058, 1197
BseYI CCCAGC 1 cut(s) 505
BsgI GTGCAG 1 cut(s) 1065
Bsh1236I CGCG 1 cut(s) 88
Bsh1285I CGRYCG 1 cut(s) 994
BshFI GGCC 4 cut(s) 785, 976, 1093, 1107
BshNI GGYRCC 2 cut(s) 467, 1637
BsiEI CGRYCG 1 cut(s) 994
BsiHKAI GWGCWC 2 cut(s) 107, 1407
BsiSI CCGG 3 cut(s) 92, 206, 1573
BsiWI CGTACG 1 cut(s) 314
BslFI GGGAC 4 cut(s) 226, 1036, 1561, 1608
BslI CCNNNNNNNGG 4 cut(s) 1100, 1447, 1547, 1595
BsmAI GTCTC 2 cut(s) 1076, 1148
BsmFI GGGAC 4 cut(s) 226, 1036, 1561, 1608
BsmI GAATGC 1 cut(s) 1584
BsnI GGCC 4 cut(s) 785, 976, 1093, 1107
Bso31I GGTCTC 1 cut(s) 1076
Bsp1286I GDGCHC 3 cut(s) 107, 1407, 1642
Bsp13I TCCGGA 1 cut(s) 205
Bsp1407I TGTACA 2 cut(s) 24, 303
Bsp143I GATC 6 cut(s) 271, 634, 765, 956, 991, 1450
Bsp1720I GCTNAGC 1 cut(s) 1401
Bsp19I CCATGG 1 cut(s) 1018
BspACI CCGC 1 cut(s) 371
BspANI GGCC 4 cut(s) 785, 976, 1093, 1107
BspCNI CTCAG 4 cut(s) 232, 1018, 1144, 1393
BspEI TCCGGA 1 cut(s) 205
BspFNI CGCG 1 cut(s) 88
BspLI GGNNCC 5 cut(s) 469, 1577, 1623, 1624, 1639
BspMI ACCTGC 1 cut(s) 1246
BspPI GGATC 3 cut(s) 629, 964, 1458
BspT107I GGYRCC 2 cut(s) 467, 1637
BspTI CTTAAG 2 cut(s) 892, 1382
BspTNI GGTCTC 1 cut(s) 1076
BsrDI GCAATG 2 cut(s) 500, 1332
BsrFI RCCGGY 1 cut(s) 1572
BsrGI TGTACA 2 cut(s) 24, 303
BsrI ACTGG 4 cut(s) 231, 471, 638, 1358
BssAI RCCGGY 1 cut(s) 1572
BssECI CCNNGG 1 cut(s) 1018
BssMI GATC 6 cut(s) 271, 634, 765, 956, 991, 1450
BssT1I CCWWGG 1 cut(s) 1018
Bst2UI CCWGG 2 cut(s) 1322, 1448
Bst4CI ACNGT 6 cut(s) 322, 454, 459, 532, 827, 836
Bst6I CTCTTC 3 cut(s) 1188, 1260, 1302
BstAFI CTTAAG 2 cut(s) 892, 1382
BstAUI TGTACA 2 cut(s) 24, 303
BstBAI YACGTR 1 cut(s) 314
BstC8I GCNNGC 4 cut(s) 247, 251, 421, 1379
BstDEI CTNAG 8 cut(s) 240, 409, 1026, 1152, 1401, 1460, 1580, 1644
BstDSI CCRYGG 1 cut(s) 1018
BstF5I GGATG 5 cut(s) 46, 128, 355, 1288, 1429
BstFNI CGCG 1 cut(s) 88
BstH2I RGCGCY 1 cut(s) 1089
BstHHI GCGC 3 cut(s) 1051, 1088, 1377
BstKTI GATC 6 cut(s) 274, 637, 768, 959, 994, 1453
BstMAI GTCTC 2 cut(s) 1076, 1148
BstMBI GATC 6 cut(s) 271, 634, 765, 956, 991, 1450
BstMCI CGRYCG 1 cut(s) 994
BstMWI GCNNNNNNNGC 1 cut(s) 474
BstNI CCWGG 2 cut(s) 1322, 1448
BstNSI RCATGY 1 cut(s) 423
BstSCI CCNGG 2 cut(s) 1320, 1446
BstSFI CTRYAG 1 cut(s) 960
BstSLI GKGCMC 1 cut(s) 1642
BstUI CGCG 1 cut(s) 88
BstV1I GCAGC 2 cut(s) 1058, 1197
BstV2I GAAGAC 2 cut(s) 489, 1323
BstX2I RGATCY 3 cut(s) 634, 956, 1450
BstYI RGATCY 3 cut(s) 634, 956, 1450
BsuI GTATCC 1 cut(s) 1343
BsuRI GGCC 4 cut(s) 785, 976, 1093, 1107
BtgI CCRYGG 1 cut(s) 1018
BtgZI GCGATG 1 cut(s) 1203
BtsCI GGATG 5 cut(s) 46, 128, 355, 1288, 1429
BtsI GCAGTG 2 cut(s) 1048, 1228
BtsIMutI CAGTG 6 cut(s) 478, 645, 1048, 1228, 1284, 1652
BveI ACCTGC 1 cut(s) 1246
Cac8I GCNNGC 4 cut(s) 247, 251, 421, 1379
CaiI CAGNNNCTG 3 cut(s) 477, 743, 1447
CfoI GCGC 3 cut(s) 1051, 1088, 1377
Cfr10I RCCGGY 1 cut(s) 1572
Cfr13I GGNCC 6 cut(s) 389, 770, 1092, 1106, 1575, 1622
CseI GACGC 2 cut(s) 77, 749
Csp6I GTAC 7 cut(s) 25, 290, 304, 315, 376, 455, 753
CspCI CAANNNNNGTGG 2 cut(s) 1084, 1119
CviQI GTAC 7 cut(s) 25, 290, 304, 315, 376, 455, 753
DdeI CTNAG 8 cut(s) 240, 409, 1026, 1152, 1401, 1460, 1580, 1644
DpnI GATC 6 cut(s) 273, 636, 767, 958, 993, 1452
DpnII GATC 6 cut(s) 271, 634, 765, 956, 991, 1450
DraIII CACNNNGTG 1 cut(s) 809
EaeI YGGCCR 1 cut(s) 783
Eam1104I CTCTTC 3 cut(s) 1188, 1260, 1302
EarI CTCTTC 3 cut(s) 1188, 1260, 1302
EciI GGCGGA 1 cut(s) 386
Ecl136II GAGCTC 1 cut(s) 105
Eco130I CCWWGG 1 cut(s) 1018
Eco24I GRGCYC 1 cut(s) 107
Eco31I GGTCTC 1 cut(s) 1076
Eco32I GATATC 1 cut(s) 537
Eco47I GGWCC 4 cut(s) 389, 770, 1575, 1622
Eco47III AGCGCT 1 cut(s) 1087
Eco53kI GAGCTC 1 cut(s) 105
Eco57I CTGAAG 2 cut(s) 1046, 1181
EcoICRI GAGCTC 1 cut(s) 105
EcoO109I RGGNCCY 1 cut(s) 1622
EcoRI GAATTC 1 cut(s) 426
EcoRII CCWGG 2 cut(s) 1320, 1446
EcoRV GATATC 1 cut(s) 537
EcoT14I CCWWGG 1 cut(s) 1018
EcoT38I GRGCYC 1 cut(s) 107
ErhI CCWWGG 1 cut(s) 1018
FalI AAGNNNNNCTT 2 cut(s) 1044, 1076
FaqI GGGAC 4 cut(s) 226, 1036, 1561, 1608
FauNDI CATATG 1 cut(s) 255
FblI GTMKAC 1 cut(s) 1292
Fnu4HI GCNGC 2 cut(s) 1047, 1186
FokI GGATG 5 cut(s) 53, 135, 362, 1295, 1436
FriOI GRGCYC 1 cut(s) 107
Fsp4HI GCNGC 2 cut(s) 1047, 1186
FspBI CTAG 2 cut(s) 924, 1467
GlaI GCGC 3 cut(s) 1050, 1087, 1376
GluI GCNGC 2 cut(s) 1047, 1186
GsaI CCCAGC 1 cut(s) 509
HaeII RGCGCY 1 cut(s) 1089
HaeIII GGCC 4 cut(s) 785, 976, 1093, 1107
HapII CCGG 3 cut(s) 92, 206, 1573
HgaI GACGC 2 cut(s) 77, 749
HhaI GCGC 3 cut(s) 1051, 1088, 1377
Hin6I GCGC 3 cut(s) 1049, 1086, 1375
HinP1I GCGC 3 cut(s) 1049, 1086, 1375
HincII GTYRAC 1 cut(s) 155
HindII GTYRAC 1 cut(s) 155
HindIII AAGCTT 1 cut(s) 1379
HpaII CCGG 3 cut(s) 92, 206, 1573
Hpy166II GTNNAC 5 cut(s) 155, 290, 695, 889, 1293
Hpy188I TCNGA 7 cut(s) 399, 739, 933, 1161, 1303, 1360, 1486
Hpy188III TCNNGA 5 cut(s) 54, 145, 206, 431, 830
Hpy8I GTNNAC 5 cut(s) 155, 290, 695, 889, 1293
HpyAV CCTTC 8 cut(s) 10, 56, 61, 151, 785, 875, 1156, 1593
HpyCH4III ACNGT 6 cut(s) 322, 454, 459, 532, 827, 836
HpyCH4IV ACGT 2 cut(s) 313, 1335
HpyF10VI GCNNNNNNNGC 1 cut(s) 474
HpyF3I CTNAG 8 cut(s) 240, 409, 1026, 1152, 1401, 1460, 1580, 1644
HpySE526I ACGT 2 cut(s) 313, 1335
HspAI GCGC 3 cut(s) 1049, 1086, 1375
KflI GGGWCCC 1 cut(s) 1622
Kpn2I TCCGGA 1 cut(s) 205
Kzo9I GATC 6 cut(s) 271, 634, 765, 956, 991, 1450
LmnI GCTCC 1 cut(s) 1372
Lsp1109I GCAGC 2 cut(s) 1058, 1197
LweI GCATC 4 cut(s) 113, 352, 937, 1354
MaeI CTAG 2 cut(s) 924, 1467
MaeII ACGT 2 cut(s) 313, 1335
MaeIII GTNAC 1 cut(s) 448
MalI GATC 6 cut(s) 273, 636, 767, 958, 993, 1452
MboI GATC 6 cut(s) 271, 634, 765, 956, 991, 1450
MboII GAAGA 8 cut(s) 489, 1052, 1205, 1274, 1277, 1319, 1328, 1534
MflI RGATCY 3 cut(s) 634, 956, 1450
MhlI GDGCHC 3 cut(s) 107, 1407, 1642
MlsI TGGCCA 1 cut(s) 785
MluCI AATT 7 cut(s) 167, 426, 761, 819, 901, 1232, 1560
MluI ACGCGT 1 cut(s) 86
MluNI TGGCCA 1 cut(s) 785
MlyI GAGTC 6 cut(s) 17, 80, 539, 1150, 1298, 1484
Mox20I TGGCCA 1 cut(s) 785
MroI TCCGGA 1 cut(s) 205
MroXI GAANNNNTTC 1 cut(s) 885
MscI TGGCCA 1 cut(s) 785
MseI TTAA 5 cut(s) 893, 900, 1082, 1235, 1383
MslI CAYNNNNRTG 2 cut(s) 32, 530
Msp20I TGGCCA 1 cut(s) 785
MspA1I CMGCKG 1 cut(s) 1211
MspCI CTTAAG 2 cut(s) 892, 1382
MspI CCGG 3 cut(s) 92, 206, 1573
MspR9I CCNGG 2 cut(s) 1322, 1448
Mva1269I GAATGC 1 cut(s) 1584
MvaI CCWGG 2 cut(s) 1322, 1448
MvnI CGCG 1 cut(s) 88
MwoI GCNNNNNNNGC 1 cut(s) 474
NcoI CCATGG 1 cut(s) 1018
NdeI CATATG 1 cut(s) 255
NdeII GATC 6 cut(s) 271, 634, 765, 956, 991, 1450
NlaIV GGNNCC 5 cut(s) 469, 1577, 1623, 1624, 1639
NspI RCATGY 1 cut(s) 423
OliI CACNNNNGTG 1 cut(s) 530
PaeI GCATGC 1 cut(s) 423
PcsI WCGNNNNNNNCGW 1 cut(s) 85
PctI GAATGC 1 cut(s) 1584
PdmI GAANNNNTTC 1 cut(s) 885
PfeI GAWTC 9 cut(s) 50, 443, 522, 550, 795, 866, 983, 1057, 1205
Pfl23II CGTACG 1 cut(s) 314
PflMI CCANNNNNTGG 2 cut(s) 1447, 1547
PkrI GCNGC 2 cut(s) 1048, 1187
Ple19I CGATCG 1 cut(s) 994
PleI GAGTC 6 cut(s) 16, 79, 539, 1150, 1297, 1483
PpsI GAGTC 6 cut(s) 16, 79, 539, 1150, 1297, 1483
Ppu21I YACGTR 1 cut(s) 314
PpuMI RGGWCCY 1 cut(s) 1622
Psp124BI GAGCTC 1 cut(s) 107
Psp5II RGGWCCY 1 cut(s) 1622
Psp6I CCWGG 2 cut(s) 1320, 1446
PspFI CCCAGC 1 cut(s) 505
PspGI CCWGG 2 cut(s) 1320, 1446
PspLI CGTACG 1 cut(s) 314
PspN4I GGNNCC 5 cut(s) 469, 1577, 1623, 1624, 1639
PspPI GGNCC 6 cut(s) 389, 770, 1092, 1106, 1575, 1622
PspPPI RGGWCCY 1 cut(s) 1622
PsrI GAACNNNNNNTAC 2 cut(s) 870, 902
PstNI CAGNNNCTG 3 cut(s) 477, 743, 1447
PsuI RGATCY 3 cut(s) 634, 956, 1450
PvuI CGATCG 1 cut(s) 994
PvuII CAGCTG 1 cut(s) 1211
RsaI GTAC 7 cut(s) 26, 291, 305, 316, 377, 456, 754
RsaNI GTAC 7 cut(s) 25, 290, 304, 315, 376, 455, 753
RseI CAYNNNNRTG 2 cut(s) 32, 530
SacI GAGCTC 1 cut(s) 107
SaqAI TTAA 5 cut(s) 893, 900, 1082, 1235, 1383
SatI GCNGC 2 cut(s) 1047, 1186
Sau3AI GATC 6 cut(s) 271, 634, 765, 956, 991, 1450
Sau96I GGNCC 6 cut(s) 389, 770, 1092, 1106, 1575, 1622
ScaI AGTACT 2 cut(s) 456, 754
SchI GAGTC 6 cut(s) 17, 80, 539, 1150, 1298, 1484
ScrFI CCNGG 2 cut(s) 1322, 1448
SduI GDGCHC 3 cut(s) 107, 1407, 1642
SfaNI GCATC 4 cut(s) 113, 352, 937, 1354
SfcI CTRYAG 1 cut(s) 960
SinI GGWCC 4 cut(s) 389, 770, 1575, 1622
SmiMI CAYNNNNRTG 2 cut(s) 32, 530
SmlI CTYRAG 2 cut(s) 892, 1382
SmoI CTYRAG 2 cut(s) 892, 1382
SphI GCATGC 1 cut(s) 423
Sse9I AATT 7 cut(s) 167, 426, 761, 819, 901, 1232, 1560
SsiI CCGC 1 cut(s) 371
SspMI CTAG 2 cut(s) 924, 1467
SstI GAGCTC 1 cut(s) 107
StyD4I CCNGG 2 cut(s) 1320, 1446
StyI CCWWGG 1 cut(s) 1018
TaaI ACNGT 6 cut(s) 322, 454, 459, 532, 827, 836
TaiI ACGT 2 cut(s) 316, 1338
TaqI TCGA 6 cut(s) 53, 79, 133, 430, 548, 990
TaqII GACCGA 1 cut(s) 758
TasI AATT 7 cut(s) 167, 426, 761, 819, 901, 1232, 1560
TatI WGTACW 5 cut(s) 24, 303, 375, 454, 752
TfiI GAWTC 9 cut(s) 50, 443, 522, 550, 795, 866, 983, 1057, 1205
Tru1I TTAA 5 cut(s) 893, 900, 1082, 1235, 1383
Tru9I TTAA 5 cut(s) 893, 900, 1082, 1235, 1383
TscAI CASTG 6 cut(s) 478, 645, 1048, 1228, 1284, 1652
TseI GCWGC 2 cut(s) 1046, 1185
TspDTI ATGAA 8 cut(s) 177, 489, 1206, 1218, 1320, 1329, 1488, 1571
TspGWI ACGGA 2 cut(s) 451, 1385
TspRI CASTG 6 cut(s) 478, 645, 1048, 1228, 1284, 1652
Van91I CCANNNNNTGG 2 cut(s) 1447, 1547
Vha464I CTTAAG 2 cut(s) 892, 1382
VpaK11BI GGWCC 4 cut(s) 389, 770, 1575, 1622
XapI RAATTY 1 cut(s) 426
XceI RCATGY 1 cut(s) 423
XcmI CCANNNNNNNNNTGG 1 cut(s) 1423
XmiI GTMKAC 1 cut(s) 1292
XmnI GAANNNNTTC 1 cut(s) 885
XspI CTAG 2 cut(s) 924, 1467
ZrmI AGTACT 2 cut(s) 456, 754
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.