Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0004419

Physical Location & Seq

Genomic Coordinates Reverse (-)

56287621 .. 56293622

Gene Structure 6002 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG414800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2115 bp

ATGAGTGAGTCGGCGAAGGTTTTGTACATAGTGGTGGTGGATGCCGAGGAAGCGAGAGAGAAAGGGCAGGAGTCTTTTCGATATACGCGTCCGGTTTTGCAGAGCTCTCTGCAACTCATGGGATGCAAGCCTCGACACGCCTTCAAGATTAGTCAACGAGTTTTTGAATTGATAAGAAACGTAAGTTCATGTAATGCCTTGCTTCCGGACGGGACAGAGAATGTTTCCCCCAGTAAAGCTGAGGCGTGCAAGCATATGGTTTCAGGGAAAGATCATAGAAGTAAGAGTGTACCATTTGAAATGTACAAAACACGTACGACTGTTGTAGTTAGGAGAGAAACTTACTTGGATGTTGTTTGTGATGCTCTGGCTGAGTACAAGTATGTTGGTCCAAATCAGAGGGCAGACTTAGTTTTGGCATGCAGAATTCGAGAACGGAAGGAATCTGTAACAGTACTGTTGTGCGGCACCAGTGGCTGTGGAAAATCTACTTTGTCTTCATTGCTGGGTAGTAGGTTGGGAATCACAACTGTGATATCTACCGACTCGATTCGGCACATGATGAGGAGTTTCGCAGATGAGAAGCAAAATCCTTTACTATGGGCTTCAACCTATCATGCAGGGGAGTGTTTAGATCCAGTGGCAGTTGCAGAAGCAAAAGCCAAAAAGAAAGCCAAAAAATCAGCTGGAAGTTCACATTCACTTTCTAAAGATGGAATAGTTGATGGCTCTATGTTAGACGCTGGTTCGAGTACTGCTGAATTGATCGGTCCAAAGCAGATGGCCATTGAAGGATTCAAGGCACAAAGTGAGATGGTAATTGACAGTCTTGACCGTCTTATTACTGCATGGGAGGAAAGAAAAGAATCAGTTATTGTAGAAGGTGTTCACTTAAGCCTTAATTTTGTGATGGGGCTTATGAAGAAACACCCTTCGATCATACCATTCATGATATTTATCACAAATGAGGATAAGCACTTGGAGAGATTTGCAGTACGTGCAAAGTATATGACACTGGACCCAGCAAAGAACAAATATGTGAAGTACATCCGAAACATCAGAACAATTCAAGAATATCTCTGCCAGAGGGCTGACAAGCATCTTGTCCCCAAAATTAACAACACTAATGTTGACAAGAGTGTGGCTGCAATCCATGCAACAGTCTTTAGCTGCCTCCGTAGGCGTGAAGCAGGGGAACAACTTTATGATCCCACGAGAAATACAGTAACCGTAGTGGATGAGGAGTATAGGAACCAGCGTGCAGCCAATTCTTTGAGTTCAAAGGGGATGTTTCAACTTATCCAGAGAAAAGGGTCATCTAGGCATCTGATGGCTCTTGTAAATACTGATGGATCTGTAGCAAAGGCTTGGCCTGTTGATTCAGTCGATCGTAATGGGAAGCCTATATTCTGCCATGGGACTGAGATGGAGATTGGCAGTGCAGAGCAAGTGAATCTTCAGTTTGGTCTCTATGGTTTAAGCGCTTGGCCCAAAGATGGTGGCCCAAGCTGTGCTGGAAGTGTTGATGGGTCAAGGGCTGATGATACTGAGACTGTAAGTAGGCATTTCTCTTCTTGCTGCAGCTCACCACGATCGGAGGGACCTGCCAAGGAGCTGAAGGAGGACAACTCGGTGCATGGCAGCGATGAAGAGGTTGATGAATCAGCTGATGTAGGCAGTGATGAGGAATTAAGTGATGATGATGACAAACAAGTTGAAGAAGAGATAGGGTCAGTGGATGAGGAGTCTACGAAATCAGATGAAGAGTATGAAGACCTGGCAATGCAGGACGTTCAGGGGAATGGATACTGGTCAGATGATGGTGCTACGGAGCGCAAGCTTAAGATATTCCCAGTTGCTGAGCACCCATCAGCCAATAAGGATGTGGATAAGTATCGCCAGAACCTGGATCTTTTCCTTAGAACTAGAAACGAGTCATTTTCTGAACCACTATGTTCATATACGTCTCTCCTCTTTATGGAGAAGAATGAGATGACAATGCCGTGCTCTGGCAATATGAAAATTAGAAAACGCCGGTCCCTTAGCATTCCAGCATTGGGAAGGCATGGGTCAAAAACAAGGGGTCCCATACTTTCTGGTGCCCCTCAGTGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006066 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009058 GO:0009987 GO:0010264 GO:0017144 GO:0019637 GO:0019751 GO:0032958 GO:0033517 GO:0043647 GO:0044237 GO:0044281 GO:0044283 GO:0046165 GO:0046173 GO:0071704 GO:0090407 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA_33

Protein Analysis

704

Amino Acids

78.13

Weight (kDa)

6.33

Isoelectric Point (pI)

42.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_33	PF13671	152 - 198	7.2e-06	AAA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004419)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45090 AT3G45090 AT5G60760 AT5G60760
fragaria_vesca	FvH4_3g31410 FvH4_3g31410 FvH4_3g31410 FvH4_3g31410 FvH4_3g31410 FvH4_3g31410
malus_domestica	MD03G1124200.v1.1 MD11G1141200.v1.1
prunus_persica	Prupe.6G106900_v2.0.a1 Prupe.6G106900_v2.0.a1 Prupe.6G106900_v2.0.a1
pyrus_communis	pycom11g11720 pycom11g11730 pycom11g11740
rosa_chinensis	RchiOBHm_Chr5g0058141
rosa_laevigata	RLG00000035194
rosa_multiflora	Rmu_sc0000367.1_g000014
rosa_roxburghii	Rroxscaffold_1G00022450
rosa_rugosa	Rorug05G0311300 Rorug05G0311400 Rorug05G0311500
rosa_samantha	Rh5AG379700 Rh5BG390800 Rh5CG414800 Rh5DG405500 Rh7BG226800 Rh7BG226900
rosa_wichuraiana	Rw5G035740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1612
AccB1I	GGYRCC	2 cut(s)	467, 2099
AccB7I	CCANNNNNTGG	1 cut(s)	1906
AccI	GTMKAC	1 cut(s)	1748
AccII	CGCG	1 cut(s)	88
AccIII	TCCGGA	1 cut(s)	205
AciI	CCGC	1 cut(s)	465
AclWI	GGATC	4 cut(s)	629, 1202, 1360, 1917
AcoI	YGGCCR	1 cut(s)	783
AcsI	RAATTY	1 cut(s)	426
AcuI	CTGAAG	2 cut(s)	1442, 1637
AdeI	CACNNNGTG	1 cut(s)	809
AfaI	GTAC	9 cut(s)	26, 291, 305, 316, 377, 456, 754, 996, 1046
AfeI	AGCGCT	1 cut(s)	1483
AfiI	CCNNNNNNNGG	5 cut(s)	1496, 1906, 1978, 2009, 2057
AflII	CTTAAG	2 cut(s)	892, 1841
AflIII	ACRYGT	2 cut(s)	86, 311
AjnI	CCWGG	2 cut(s)	1776, 1905
AleI	CACNNNNGTG	1 cut(s)	530
AluBI	AGCT	9 cut(s)	105, 239, 686, 1170, 1509, 1584, 1615, 1667, 1840
AluI	AGCT	9 cut(s)	105, 239, 686, 1170, 1509, 1584, 1615, 1667, 1840
Alw21I	GWGCWC	3 cut(s)	107, 1866, 2009
Alw26I	GTCTC	3 cut(s)	1472, 1544, 1971
AlwI	GGATC	4 cut(s)	629, 1202, 1360, 1917
AlwNI	CAGNNNCTG	3 cut(s)	477, 1859, 1906
Aor13HI	TCCGGA	1 cut(s)	205
Aor51HI	AGCGCT	1 cut(s)	1483
AoxI	GGCC	4 cut(s)	783, 1370, 1487, 1501
ApeKI	GCWGC	6 cut(s)	1145, 1170, 1262, 1578, 1581, 1641
ApoI	RAATTY	1 cut(s)	426
Asp700I	GAANNNNTTC	1 cut(s)	885
AspLEI	GCGC	2 cut(s)	1484, 1836
AspS9I	GGNCC	8 cut(s)	389, 770, 1018, 1488, 1502, 1601, 2037, 2084
AsuHPI	GGTGA	1 cut(s)	1578
AvaII	GGWCC	6 cut(s)	389, 770, 1018, 1601, 2037, 2084
BaeGI	GKGCMC	1 cut(s)	2104
BalI	TGGCCA	1 cut(s)	785
BanI	GGYRCC	2 cut(s)	467, 2099
BanII	GRGCYC	1 cut(s)	107
BarI	GAAGNNNNNNTAC	2 cut(s)	8, 40
BauI	CACGAG	1 cut(s)	1213
BbsI	GAAGAC	2 cut(s)	489, 1779
Bbv12I	GWGCWC	3 cut(s)	107, 1866, 2009
BbvCI	CCTCAGC	1 cut(s)	240
BbvI	GCAGC	6 cut(s)	1132, 1157, 1274, 1565, 1593, 1653
BceAI	ACGGC	1 cut(s)	1987
BciT130I	CCWGG	2 cut(s)	1778, 1907
BciVI	GTATCC	1 cut(s)	1799
BcoDI	GTCTC	3 cut(s)	1472, 1544, 1971
BfaI	CTAG	2 cut(s)	1320, 1926
BfmI	CTRYAG	2 cut(s)	1356, 1579
BfoI	RGCGCY	1 cut(s)	1485
BfrI	CTTAAG	2 cut(s)	892, 1841
BfuAI	ACCTGC	1 cut(s)	1612
BfuI	GTATCC	1 cut(s)	1799
BisI	GCNGC	7 cut(s)	466, 1146, 1171, 1263, 1579, 1582, 1642
BlpI	GCTNAGC	1 cut(s)	1860
BlsI	GCNGC	7 cut(s)	467, 1147, 1172, 1264, 1580, 1583, 1643
BmcAI	AGTACT	2 cut(s)	456, 754
Bme1390I	CCNGG	2 cut(s)	1778, 1907
Bme18I	GGWCC	6 cut(s)	389, 770, 1018, 1601, 2037, 2084
BmgT120I	GGNCC	8 cut(s)	389, 770, 1018, 1488, 1502, 1601, 2037, 2084
BmiI	GGNNCC	8 cut(s)	469, 1020, 1253, 1602, 2039, 2085, 2086, 2101
BmrFI	CCNGG	2 cut(s)	1778, 1907
BmrI	ACTGGG	2 cut(s)	225, 1847
BmsI	GCATC	5 cut(s)	31, 113, 352, 1108, 1333
BmuI	ACTGGG	2 cut(s)	225, 1847
BpiI	GAAGAC	2 cut(s)	489, 1779
BplI	GAGNNNNNCTC	2 cut(s)	1613, 1645
Bpu10I	CCTNAGC	2 cut(s)	240, 2042
Bpu1102I	GCTNAGC	1 cut(s)	1860
BsaAI	YACGTR	2 cut(s)	314, 998
BsaBI	GATNNNNATC	2 cut(s)	956, 1893
BsaI	GGTCTC	1 cut(s)	1472
BsaJI	CCNNGG	3 cut(s)	45, 1414, 1608
BsaWI	WCCGGW	2 cut(s)	91, 205
Bsc4I	CCNNNNNNNGG	5 cut(s)	1496, 1906, 1978, 2009, 2057
Bse118I	RCCGGY	1 cut(s)	2034
Bse1I	ACTGG	6 cut(s)	231, 471, 638, 1020, 1814, 1853
Bse3DI	GCAATG	2 cut(s)	500, 1788
Bse8I	GATNNNNATC	2 cut(s)	956, 1893
BseAI	TCCGGA	1 cut(s)	205
BseBI	CCWGG	2 cut(s)	1778, 1907
BseDI	CCNNGG	3 cut(s)	45, 1414, 1608
BseGI	GGATG	8 cut(s)	46, 128, 355, 1047, 1243, 1293, 1744, 1888
BseJI	GATNNNNATC	2 cut(s)	956, 1893
BseLI	CCNNNNNNNGG	5 cut(s)	1496, 1906, 1978, 2009, 2057
BseMI	GCAATG	2 cut(s)	500, 1788
BseMII	CTCAG	5 cut(s)	231, 363, 1413, 1539, 1851
BseNI	ACTGG	6 cut(s)	231, 471, 638, 1020, 1814, 1853
BseRI	GAGGAG	4 cut(s)	580, 1256, 1757, 1961
BseSI	GKGCMC	1 cut(s)	2104
BseXI	GCAGC	6 cut(s)	1132, 1157, 1274, 1565, 1593, 1653
BseYI	CCCAGC	2 cut(s)	505, 1021
BsgI	GTGCAG	2 cut(s)	1281, 1461
Bsh1236I	CGCG	1 cut(s)	88
Bsh1285I	CGRYCG	2 cut(s)	1390, 1595
BshFI	GGCC	4 cut(s)	785, 1372, 1489, 1503
BshNI	GGYRCC	2 cut(s)	467, 2099
BsiEI	CGRYCG	2 cut(s)	1390, 1595
BsiHKAI	GWGCWC	3 cut(s)	107, 1866, 2009
BsiSI	CCGG	3 cut(s)	92, 206, 2035
BsiWI	CGTACG	1 cut(s)	314
BslFI	GGGAC	6 cut(s)	226, 1091, 1432, 1614, 2023, 2070
BslI	CCNNNNNNNGG	5 cut(s)	1496, 1906, 1978, 2009, 2057
BsmAI	GTCTC	3 cut(s)	1472, 1544, 1971
BsmBI	CGTCTC	1 cut(s)	1971
BsmFI	GGGAC	6 cut(s)	226, 1091, 1432, 1614, 2023, 2070
BsmI	GAATGC	1 cut(s)	2046
BsnI	GGCC	4 cut(s)	785, 1372, 1489, 1503
Bso31I	GGTCTC	1 cut(s)	1472
Bsp1286I	GDGCHC	4 cut(s)	107, 1866, 2009, 2104
Bsp13I	TCCGGA	1 cut(s)	205
Bsp1407I	TGTACA	2 cut(s)	24, 303
Bsp143I	GATC	9 cut(s)	271, 634, 765, 936, 1207, 1352, 1387, 1592, 1909
Bsp1720I	GCTNAGC	1 cut(s)	1860
Bsp19I	CCATGG	1 cut(s)	1414
BspACI	CCGC	1 cut(s)	465
BspANI	GGCC	4 cut(s)	785, 1372, 1489, 1503
BspCNI	CTCAG	5 cut(s)	232, 364, 1414, 1540, 1852
BspEI	TCCGGA	1 cut(s)	205
BspFNI	CGCG	1 cut(s)	88
BspHI	TCATGA	1 cut(s)	948
BspLI	GGNNCC	8 cut(s)	469, 1020, 1253, 1602, 2039, 2085, 2086, 2101
BspMAI	CTGCAG	1 cut(s)	1583
BspMI	ACCTGC	1 cut(s)	1612
BspPI	GGATC	4 cut(s)	629, 1202, 1360, 1917
BspT107I	GGYRCC	2 cut(s)	467, 2099
BspTI	CTTAAG	2 cut(s)	892, 1841
BspTNI	GGTCTC	1 cut(s)	1472
BsrDI	GCAATG	2 cut(s)	500, 1788
BsrFI	RCCGGY	1 cut(s)	2034
BsrGI	TGTACA	2 cut(s)	24, 303
BsrI	ACTGG	6 cut(s)	231, 471, 638, 1020, 1814, 1853
BssAI	RCCGGY	1 cut(s)	2034
BssECI	CCNNGG	3 cut(s)	45, 1414, 1608
BssMI	GATC	9 cut(s)	271, 634, 765, 936, 1207, 1352, 1387, 1592, 1909
BssSI	CACGAG	1 cut(s)	1213
BssT1I	CCWWGG	2 cut(s)	1414, 1608
Bst2BI	CACGAG	1 cut(s)	1213
Bst2UI	CCWGG	2 cut(s)	1778, 1907
Bst6I	CTCTTC	4 cut(s)	1576, 1644, 1716, 1758
BstAFI	CTTAAG	2 cut(s)	892, 1841
BstAPI	GCANNNNNTGC	2 cut(s)	998, 1154
BstAUI	TGTACA	2 cut(s)	24, 303
BstBAI	YACGTR	2 cut(s)	314, 998
BstC8I	GCNNGC	6 cut(s)	128, 247, 251, 421, 1260, 1838
BstDEI	CTNAG	9 cut(s)	240, 372, 409, 1422, 1548, 1860, 1919, 2042, 2106
BstDSI	CCRYGG	1 cut(s)	1414
BstF5I	GGATG	8 cut(s)	46, 128, 355, 1047, 1243, 1293, 1744, 1888
BstFNI	CGCG	1 cut(s)	88
BstH2I	RGCGCY	1 cut(s)	1485
BstHHI	GCGC	2 cut(s)	1484, 1836
BstKTI	GATC	9 cut(s)	274, 637, 768, 939, 1210, 1355, 1390, 1595, 1912
BstMAI	GTCTC	3 cut(s)	1472, 1544, 1971
BstMBI	GATC	9 cut(s)	271, 634, 765, 936, 1207, 1352, 1387, 1592, 1909
BstMCI	CGRYCG	2 cut(s)	1390, 1595
BstMWI	GCNNNNNNNGC	4 cut(s)	50, 474, 998, 1154
BstNI	CCWGG	2 cut(s)	1778, 1907
BstNSI	RCATGY	1 cut(s)	423
BstSCI	CCNGG	2 cut(s)	1776, 1905
BstSFI	CTRYAG	2 cut(s)	1356, 1579
BstSLI	GKGCMC	1 cut(s)	2104
BstUI	CGCG	1 cut(s)	88
BstV1I	GCAGC	6 cut(s)	1132, 1157, 1274, 1565, 1593, 1653
BstV2I	GAAGAC	2 cut(s)	489, 1779
BstX2I	RGATCY	3 cut(s)	634, 1352, 1909
BstYI	RGATCY	3 cut(s)	634, 1352, 1909
BsuI	GTATCC	1 cut(s)	1799
BsuRI	GGCC	4 cut(s)	785, 1372, 1489, 1503
BtgI	CCRYGG	1 cut(s)	1414
BtgZI	GCGATG	1 cut(s)	1659
BtsCI	GGATG	8 cut(s)	46, 128, 355, 1047, 1243, 1293, 1744, 1888
BtsI	GCAGTG	2 cut(s)	1444, 1684
BtsIMutI	CAGTG	7 cut(s)	478, 645, 1013, 1444, 1684, 1740, 2114
BveI	ACCTGC	1 cut(s)	1612
Cac8I	GCNNGC	6 cut(s)	128, 247, 251, 421, 1260, 1838
CaiI	CAGNNNCTG	3 cut(s)	477, 1859, 1906
CciI	TCATGA	1 cut(s)	948
CfoI	GCGC	2 cut(s)	1484, 1836
Cfr10I	RCCGGY	1 cut(s)	2034
Cfr13I	GGNCC	8 cut(s)	389, 770, 1018, 1488, 1502, 1601, 2037, 2084
CseI	GACGC	2 cut(s)	77, 749
Csp6I	GTAC	9 cut(s)	25, 290, 304, 315, 376, 455, 753, 995, 1045
CspCI	CAANNNNNGTGG	2 cut(s)	1480, 1515
CviQI	GTAC	9 cut(s)	25, 290, 304, 315, 376, 455, 753, 995, 1045
DdeI	CTNAG	9 cut(s)	240, 372, 409, 1422, 1548, 1860, 1919, 2042, 2106
DpnI	GATC	9 cut(s)	273, 636, 767, 938, 1209, 1354, 1389, 1594, 1911
DpnII	GATC	9 cut(s)	271, 634, 765, 936, 1207, 1352, 1387, 1592, 1909
DraIII	CACNNNGTG	1 cut(s)	809
EaeI	YGGCCR	1 cut(s)	783
Eam1104I	CTCTTC	4 cut(s)	1576, 1644, 1716, 1758
EarI	CTCTTC	4 cut(s)	1576, 1644, 1716, 1758
Ecl136II	GAGCTC	1 cut(s)	105
Eco130I	CCWWGG	2 cut(s)	1414, 1608
Eco24I	GRGCYC	1 cut(s)	107
Eco31I	GGTCTC	1 cut(s)	1472
Eco32I	GATATC	1 cut(s)	537
Eco47I	GGWCC	6 cut(s)	389, 770, 1018, 1601, 2037, 2084
Eco47III	AGCGCT	1 cut(s)	1483
Eco53kI	GAGCTC	1 cut(s)	105
Eco57I	CTGAAG	2 cut(s)	1442, 1637
EcoICRI	GAGCTC	1 cut(s)	105
EcoO109I	RGGNCCY	2 cut(s)	1601, 2084
EcoRI	GAATTC	1 cut(s)	426
EcoRII	CCWGG	2 cut(s)	1776, 1905
EcoRV	GATATC	1 cut(s)	537
EcoT14I	CCWWGG	2 cut(s)	1414, 1608
EcoT38I	GRGCYC	1 cut(s)	107
ErhI	CCWWGG	2 cut(s)	1414, 1608
Esp3I	CGTCTC	1 cut(s)	1971
FalI	AAGNNNNNCTT	2 cut(s)	1440, 1472
FaqI	GGGAC	6 cut(s)	226, 1091, 1432, 1614, 2023, 2070
FauNDI	CATATG	1 cut(s)	255
FblI	GTMKAC	1 cut(s)	1748
Fnu4HI	GCNGC	7 cut(s)	466, 1146, 1171, 1263, 1579, 1582, 1642
FokI	GGATG	8 cut(s)	53, 135, 362, 1034, 1250, 1300, 1751, 1895
FriOI	GRGCYC	1 cut(s)	107
Fsp4HI	GCNGC	7 cut(s)	466, 1146, 1171, 1263, 1579, 1582, 1642
FspBI	CTAG	2 cut(s)	1320, 1926
GlaI	GCGC	2 cut(s)	1483, 1835
GluI	GCNGC	7 cut(s)	466, 1146, 1171, 1263, 1579, 1582, 1642
GsaI	CCCAGC	2 cut(s)	509, 1025
HaeII	RGCGCY	1 cut(s)	1485
HaeIII	GGCC	4 cut(s)	785, 1372, 1489, 1503
HapII	CCGG	3 cut(s)	92, 206, 2035
HgaI	GACGC	2 cut(s)	77, 749
HhaI	GCGC	2 cut(s)	1484, 1836
Hin6I	GCGC	2 cut(s)	1482, 1834
HinP1I	GCGC	2 cut(s)	1482, 1834
HincII	GTYRAC	2 cut(s)	155, 1132
HindII	GTYRAC	2 cut(s)	155, 1132
HindIII	AAGCTT	1 cut(s)	1838
HpaII	CCGG	3 cut(s)	92, 206, 2035
HphI	GGTGA	1 cut(s)	1578
Hpy166II	GTNNAC	6 cut(s)	155, 290, 695, 889, 1132, 1749
Hpy188I	TCNGA	8 cut(s)	399, 1052, 1061, 1329, 1597, 1759, 1816, 1945
Hpy188III	TCNNGA	7 cut(s)	145, 206, 431, 830, 949, 1070, 1303
Hpy8I	GTNNAC	6 cut(s)	155, 290, 695, 889, 1132, 1749
HpyAV	CCTTC	8 cut(s)	10, 151, 433, 785, 875, 942, 1612, 2055
HpyCH4IV	ACGT	5 cut(s)	180, 313, 997, 1791, 1964
HpyF10VI	GCNNNNNNNGC	4 cut(s)	50, 474, 998, 1154
HpyF3I	CTNAG	9 cut(s)	240, 372, 409, 1422, 1548, 1860, 1919, 2042, 2106
HpySE526I	ACGT	5 cut(s)	180, 313, 997, 1791, 1964
HspAI	GCGC	2 cut(s)	1482, 1834
KflI	GGGWCCC	1 cut(s)	2084
Kpn2I	TCCGGA	1 cut(s)	205
Kzo9I	GATC	9 cut(s)	271, 634, 765, 936, 1207, 1352, 1387, 1592, 1909
LmnI	GCTCC	2 cut(s)	1612, 1831
Lsp1109I	GCAGC	6 cut(s)	1132, 1157, 1274, 1565, 1593, 1653
LweI	GCATC	5 cut(s)	31, 113, 352, 1108, 1333
MaeI	CTAG	2 cut(s)	1320, 1926
MaeII	ACGT	5 cut(s)	180, 313, 997, 1791, 1964
MaeIII	GTNAC	2 cut(s)	448, 1225
MalI	GATC	9 cut(s)	273, 636, 767, 938, 1209, 1354, 1389, 1594, 1911
MboI	GATC	9 cut(s)	271, 634, 765, 936, 1207, 1352, 1387, 1592, 1909
MflI	RGATCY	3 cut(s)	634, 1352, 1909
MhlI	GDGCHC	4 cut(s)	107, 1866, 2009, 2104
MlsI	TGGCCA	1 cut(s)	785
MluI	ACGCGT	1 cut(s)	86
MluNI	TGGCCA	1 cut(s)	785
MlyI	GAGTC	5 cut(s)	17, 80, 539, 1754, 1943
Mox20I	TGGCCA	1 cut(s)	785
MroI	TCCGGA	1 cut(s)	205
MroXI	GAANNNNTTC	1 cut(s)	885
MscI	TGGCCA	1 cut(s)	785
MseI	TTAA	6 cut(s)	893, 900, 1116, 1478, 1691, 1842
MslI	CAYNNNNRTG	2 cut(s)	32, 530
Msp20I	TGGCCA	1 cut(s)	785
MspA1I	CMGCKG	2 cut(s)	686, 1667
MspCI	CTTAAG	2 cut(s)	892, 1841
MspI	CCGG	3 cut(s)	92, 206, 2035
MspR9I	CCNGG	2 cut(s)	1778, 1907
Mva1269I	GAATGC	1 cut(s)	2046
MvaI	CCWGG	2 cut(s)	1778, 1907
MvnI	CGCG	1 cut(s)	88
MwoI	GCNNNNNNNGC	4 cut(s)	50, 474, 998, 1154
NcoI	CCATGG	1 cut(s)	1414
NdeI	CATATG	1 cut(s)	255
NdeII	GATC	9 cut(s)	271, 634, 765, 936, 1207, 1352, 1387, 1592, 1909
NlaIV	GGNNCC	8 cut(s)	469, 1020, 1253, 1602, 2039, 2085, 2086, 2101
NmeAIII	GCCGAG	1 cut(s)	70
NspI	RCATGY	1 cut(s)	423
OliI	CACNNNNGTG	1 cut(s)	530
PaeI	GCATGC	1 cut(s)	423
PagI	TCATGA	1 cut(s)	948
PcsI	WCGNNNNNNNCGW	1 cut(s)	85
PctI	GAATGC	1 cut(s)	2046
PdmI	GAANNNNTTC	1 cut(s)	885
PfeI	GAWTC	8 cut(s)	443, 522, 550, 795, 866, 1379, 1453, 1661
Pfl23II	CGTACG	1 cut(s)	314
PflMI	CCANNNNNTGG	1 cut(s)	1906
PkrI	GCNGC	7 cut(s)	467, 1147, 1172, 1264, 1580, 1583, 1643
Ple19I	CGATCG	2 cut(s)	1390, 1595
PleI	GAGTC	5 cut(s)	16, 79, 539, 1753, 1942
PpsI	GAGTC	5 cut(s)	16, 79, 539, 1753, 1942
Ppu21I	YACGTR	2 cut(s)	314, 998
PpuMI	RGGWCCY	2 cut(s)	1601, 2084
Psp124BI	GAGCTC	1 cut(s)	107
Psp5II	RGGWCCY	2 cut(s)	1601, 2084
Psp6I	CCWGG	2 cut(s)	1776, 1905
PspFI	CCCAGC	2 cut(s)	505, 1021
PspGI	CCWGG	2 cut(s)	1776, 1905
PspLI	CGTACG	1 cut(s)	314
PspN4I	GGNNCC	8 cut(s)	469, 1020, 1253, 1602, 2039, 2085, 2086, 2101
PspPI	GGNCC	8 cut(s)	389, 770, 1018, 1488, 1502, 1601, 2037, 2084
PspPPI	RGGWCCY	2 cut(s)	1601, 2084
PsrI	GAACNNNNNNTAC	2 cut(s)	870, 902
PstI	CTGCAG	1 cut(s)	1583
PstNI	CAGNNNCTG	3 cut(s)	477, 1859, 1906
PsuI	RGATCY	3 cut(s)	634, 1352, 1909
PvuI	CGATCG	2 cut(s)	1390, 1595
PvuII	CAGCTG	2 cut(s)	686, 1667
RsaI	GTAC	9 cut(s)	26, 291, 305, 316, 377, 456, 754, 996, 1046
RsaNI	GTAC	9 cut(s)	25, 290, 304, 315, 376, 455, 753, 995, 1045
RseI	CAYNNNNRTG	2 cut(s)	32, 530
SacI	GAGCTC	1 cut(s)	107
SaqAI	TTAA	6 cut(s)	893, 900, 1116, 1478, 1691, 1842
SatI	GCNGC	7 cut(s)	466, 1146, 1171, 1263, 1579, 1582, 1642
Sau3AI	GATC	9 cut(s)	271, 634, 765, 936, 1207, 1352, 1387, 1592, 1909
Sau96I	GGNCC	8 cut(s)	389, 770, 1018, 1488, 1502, 1601, 2037, 2084
ScaI	AGTACT	2 cut(s)	456, 754
SchI	GAGTC	5 cut(s)	17, 80, 539, 1754, 1943
ScrFI	CCNGG	2 cut(s)	1778, 1907
SduI	GDGCHC	4 cut(s)	107, 1866, 2009, 2104
SfaNI	GCATC	5 cut(s)	31, 113, 352, 1108, 1333
SfcI	CTRYAG	2 cut(s)	1356, 1579
SinI	GGWCC	6 cut(s)	389, 770, 1018, 1601, 2037, 2084
SmiMI	CAYNNNNRTG	2 cut(s)	32, 530
SmlI	CTYRAG	2 cut(s)	892, 1841
SmoI	CTYRAG	2 cut(s)	892, 1841
SphI	GCATGC	1 cut(s)	423
SsiI	CCGC	1 cut(s)	465
SspMI	CTAG	2 cut(s)	1320, 1926
SstI	GAGCTC	1 cut(s)	107
StyD4I	CCNGG	2 cut(s)	1776, 1905
StyI	CCWWGG	2 cut(s)	1414, 1608
TaiI	ACGT	5 cut(s)	183, 316, 1000, 1794, 1967
TaqI	TCGA	7 cut(s)	79, 133, 430, 548, 749, 935, 1386
TaqII	GACCGA	1 cut(s)	758
TatI	WGTACW	6 cut(s)	24, 303, 375, 454, 752, 1044
TauI	GCSGC	1 cut(s)	468
TfiI	GAWTC	8 cut(s)	443, 522, 550, 795, 866, 1379, 1453, 1661
Tru1I	TTAA	6 cut(s)	893, 900, 1116, 1478, 1691, 1842
Tru9I	TTAA	6 cut(s)	893, 900, 1116, 1478, 1691, 1842
TscAI	CASTG	7 cut(s)	478, 645, 1020, 1444, 1684, 1740, 2114
TseI	GCWGC	6 cut(s)	1145, 1170, 1262, 1578, 1581, 1641
TspGWI	ACGGA	3 cut(s)	451, 1166, 1844
TspRI	CASTG	7 cut(s)	478, 645, 1020, 1444, 1684, 1740, 2114
Van91I	CCANNNNNTGG	1 cut(s)	1906
Vha464I	CTTAAG	2 cut(s)	892, 1841
VpaK11BI	GGWCC	6 cut(s)	389, 770, 1018, 1601, 2037, 2084
XapI	RAATTY	1 cut(s)	426
XceI	RCATGY	1 cut(s)	423
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1882
XmiI	GTMKAC	1 cut(s)	1748
XmnI	GAANNNNTTC	1 cut(s)	885
XspI	CTAG	2 cut(s)	1320, 1926
ZrmI	AGTACT	2 cut(s)	456, 754

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.