Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0004419

Physical Location & Seq

Genomic Coordinates Forward (+)

13193817 .. 13198394

Gene Structure 4578 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1141200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2085 bp

ATGCTGTTTTATCATTTGTTTCTTCTTGCTGTGGGTATCTCATGGATCATGCTTTTTAAAGCGTTGAAATGTGCAGAGCAGATCCTTTTGGGTATTAGCCAACGGGTTTTTGAATCGATAAGAAATGAGAGTTCATCTAATGTCTTGCTTCTGGAAGGAACAGAAAATGTTCCCCCCGGTAAAGCTGAGGCTTGCAACCATTTGGGTTCAGGGAAAGATGACAGAAGCAAGAGTATACCATTTGAATTGTACAAAGCACGCACGACTGTTGTGGTTAGGAGAAAAACCTTCTTAAATGTTGTTTGTGATGCCCAGGCTGAGTACAAGTATGTTGGTCCTAACCAGCAGGCAGACTTAGCTTTGGCATGCGGAATCAGGGAAAGGAAGGAATCCGTGATTGTATTGTTGTGTGGCACTAGTGGCTGTGGAAAATCTACTTTGTCCTCATTGCTGGGTAGCAGGTTGGGAATTACAACTGTGATATCTACCGACTCAATTCGGCACATGATGAGGAGCTTTGTAGATGAAAAAGAAAACCCTCTGCTATGGGCTTCAACTTATCATGCAGGGGAGTGTCTGGATCCAGTGGCTGTTGCAGAATCCAAAACTAAAAAGAAAGCCAAAAAATTGGCTGGAACTCCATGCTCACTTCCCAAAGATGGAATGCATGATGGCTCTTCCTCTGGGAAATCTGATACGCGATTGTCAGACATCAGTTCGAGTACTGCTGAATTAATCAGTGCAAAGCAGTTGGCTGTTGAAGGATTTAAGGCTCAAAGTGAGATGGTGATTGACAGTCTTGATCGACTTATCACTGCGTGGGAGGAACGAAGAGAATCAGTTATTGTGGAAGGTGTTCACTTGAGCCTTAATTTTGTGATGGGGCTTATGAAGAAACACCCTTCTATCATTCCATTCATGATATACATCACAAATGAGGACAAACACATGGAACGGTTTGCTGTCCGTGCAAAGTATATGACACTGGACCCAACAAAGAACAAGTATGTGAAGTATATTCGTAACATCAGGACAATCCAAGAATATCTCTGTAAGCGAGCTGACAAGCATCTTGTCCCCAAAATTAACAATACAAATGTTGACAAGAGTGTGGCAGCTATCCATGCAACGGTCTTTAGCTGCCTCCGTAGGCGTGAAGCAGGGGAGCAACTTTATGATCCCACAAGAAACACAGTTACTGTAGTGGATGAGGAGTACAGGAACCAGTGTGCAGCCAATTCTTTGAGTTCTAAGGGGATGTTTCAGTTGATCCAGAGAAAAGGTTCGTCTAGGCATCTGATGGCTCTTGTAAATACCGATGGATCTGTGGCAAAGGCCTGGCCTGTTGATTCAGTTGATAGTAATGGGAAGCCTCTATATTGCCATGGGACTGAGATGGAGATTGGAACTGCAGAGCAAGTGAATCTTCAGTTTGGTCTCTATGGGATCAGTGCTTGGCCCAGTGATGGTGGTCCAAGTTGTGCTGGAAGTGTAGATGAGTCGAGGGGTGAGGGAACTGAGATTGGAAGAAGTATTCCCTCTTCCTGCTGCAGCTCGCCACGGATGTCTGAGGGACCCGCCAAACAGCTGAAAGTGGACAATTCAGTGCATGGAAGTGACGAAGAGGTTGATGAAGAGGCTGAAGCAGGCAGTGATGAAGAACTAAGTGATGATGGAGACAGACAGTTGTATGAAGAGATAGGGTCGGTGGACGAGGAGTCTACAAAAACGGATGATGAGTACGATGACCTAGCAATGCAGGATGTGCAGGAGAATGGATACTGGTTGGGAAATGATGATCGGGGAGCCAATCATAAAATTTTCCCTGTTCTGGAGGATCAATCAGCCGATAAAGAAGGGGATAAGTATCGCCAGAACCTGGATCTCTTCCGTAGAACTAGATCCGAGTCATTTTCTGAACCATTATGCTCATACTCTTCTTTGTTTATTGAGAAGAATGAGCTTCCAATACCGTGCTCTGGCAACATGAAATTTAGAAAACGCCGCTCCCTTAGCATTCCCGCCTTGGGAAGGCATGGGTCATTAGTTGGGGGTCCCATACTTTCGGGAGCCCCTCAGTGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006066 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009058 GO:0009987 GO:0010264 GO:0017144 GO:0019637 GO:0019751 GO:0032958 GO:0033517 GO:0043647 GO:0044237 GO:0044281 GO:0044283 GO:0046165 GO:0046173 GO:0071704 GO:0090407 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA_33

Protein Analysis

695

Amino Acids

76.64

Weight (kDa)

5.8

Isoelectric Point (pI)

44.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004419)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45090 AT3G45090 AT5G60760 AT5G60760
fragaria_vesca	FvH4_3g31410 FvH4_3g31410 FvH4_3g31410 FvH4_3g31410 FvH4_3g31410 FvH4_3g31410
malus_domestica	MD03G1124200.v1.1 MD11G1141200.v1.1
prunus_persica	Prupe.6G106900_v2.0.a1 Prupe.6G106900_v2.0.a1 Prupe.6G106900_v2.0.a1
pyrus_communis	pycom11g11720 pycom11g11730 pycom11g11740
rosa_chinensis	RchiOBHm_Chr5g0058141
rosa_laevigata	RLG00000035194
rosa_multiflora	Rmu_sc0000367.1_g000014
rosa_roxburghii	Rroxscaffold_1G00022450
rosa_rugosa	Rorug05G0311300 Rorug05G0311400 Rorug05G0311500
rosa_samantha	Rh5AG379700 Rh5BG390800 Rh5CG414800 Rh5DG405500 Rh7BG226800 Rh7BG226900
rosa_wichuraiana	Rw5G035740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	450
AccB7I	CCANNNNNTGG	1 cut(s)	1879
AccBSI	CCGCTC	1 cut(s)	2007
AccI	GTMKAC	2 cut(s)	235, 1721
AccII	CGCG	1 cut(s)	700
AciI	CCGC	4 cut(s)	369, 1578, 2005, 2022
AcsI	RAATTY	2 cut(s)	1818, 1991
AcuI	CTGAAG	2 cut(s)	1412, 1662
AdeI	CACNNNGTG	1 cut(s)	819
AfaI	GTAC	5 cut(s)	251, 323, 724, 1217, 1742
AfiI	CCNNNNNNNGG	8 cut(s)	659, 1129, 1466, 1831, 1879, 1979, 2027, 2031
AgsI	TTSAA	5 cut(s)	67, 113, 245, 555, 761
AhdI	GACNNNNNGTC	1 cut(s)	1717
AhlI	ACTAGT	1 cut(s)	416
AjnI	CCWGG	3 cut(s)	312, 1337, 1878
AluBI	AGCT	9 cut(s)	185, 359, 516, 1061, 1118, 1140, 1554, 1588, 1963
AluI	AGCT	9 cut(s)	185, 359, 516, 1061, 1118, 1140, 1554, 1588, 1963
Alw21I	GWGCWC	1 cut(s)	1979
Alw26I	GTCTC	2 cut(s)	1442, 1671
AlwNI	CAGNNNCTG	3 cut(s)	590, 1199, 1879
AoxI	GGCC	3 cut(s)	1335, 1340, 1457
ApeKI	GCWGC	5 cut(s)	1115, 1140, 1232, 1548, 1551
ApoI	RAATTY	2 cut(s)	1818, 1991
AseI	ATTAAT	1 cut(s)	734
Asp700I	GAANNNNTTC	3 cut(s)	168, 855, 1282
AspS9I	GGNCC	6 cut(s)	335, 988, 1458, 1472, 1574, 2054
AsuC2I	CCSGG	1 cut(s)	177
AsuHPI	GGTGA	2 cut(s)	799, 1520
AvaII	GGWCC	5 cut(s)	335, 988, 1472, 1574, 2054
BamHI	GGATCC	1 cut(s)	580
BanII	GRGCYC	1 cut(s)	2074
BarI	GAAGNNNNNNTAC	2 cut(s)	1525, 1557
Bbv12I	GWGCWC	1 cut(s)	1979
BbvCI	CCTCAGC	1 cut(s)	186
BbvI	GCAGC	5 cut(s)	1127, 1127, 1244, 1535, 1563
BccI	CCATC	9 cut(s)	653, 665, 778, 874, 1294, 1313, 1390, 1460, 1667
BciT130I	CCWGG	3 cut(s)	314, 1339, 1880
BciVI	GTATCC	1 cut(s)	1772
BcnI	CCSGG	1 cut(s)	177
BcoDI	GTCTC	2 cut(s)	1442, 1671
BcuI	ACTAGT	1 cut(s)	416
BfaI	CTAG	4 cut(s)	417, 1290, 1751, 1899
BfmI	CTRYAG	3 cut(s)	1200, 1410, 1549
BfuAI	ACCTGC	1 cut(s)	450
BfuI	GTATCC	1 cut(s)	1772
BisI	GCNGC	6 cut(s)	1116, 1141, 1233, 1549, 1552, 2005
BlsI	GCNGC	6 cut(s)	1117, 1142, 1234, 1550, 1553, 2006
BmcAI	AGTACT	1 cut(s)	724
Bme1390I	CCNGG	4 cut(s)	177, 314, 1339, 1880
Bme18I	GGWCC	5 cut(s)	335, 988, 1472, 1574, 2054
BmeRI	GACNNNNNGTC	1 cut(s)	1717
BmgT120I	GGNCC	6 cut(s)	335, 988, 1458, 1472, 1574, 2054
BmiI	GGNNCC	9 cut(s)	582, 990, 1223, 1575, 1576, 1807, 2055, 2056, 2071
BmrFI	CCNGG	4 cut(s)	177, 314, 1339, 1880
BmrI	ACTGGG	1 cut(s)	1455
BmsI	GCATC	3 cut(s)	298, 1078, 1303
BmuI	ACTGGG	1 cut(s)	1455
BpmI	CTGGAG	1 cut(s)	1853
Bpu10I	CCTNAGC	2 cut(s)	186, 2012
BpuEI	CTTGAG	1 cut(s)	883
BpuMI	CCSGG	1 cut(s)	177
Bsa29I	ATCGAT	1 cut(s)	116
BsaBI	GATNNNNATC	2 cut(s)	926, 1866
BsaI	GGTCTC	1 cut(s)	1442
BsaJI	CCNNGG	5 cut(s)	175, 312, 1384, 1559, 2025
Bsc4I	CCNNNNNNNGG	8 cut(s)	659, 1129, 1466, 1831, 1879, 1979, 2027, 2031
Bse1I	ACTGG	5 cut(s)	584, 990, 1225, 1461, 1787
Bse3DI	GCAATG	2 cut(s)	446, 1761
Bse8I	GATNNNNATC	2 cut(s)	926, 1866
BseBI	CCWGG	3 cut(s)	314, 1339, 1880
BseCI	ATCGAT	1 cut(s)	116
BseDI	CCNNGG	5 cut(s)	175, 312, 1384, 1559, 2025
BseGI	GGATG	5 cut(s)	1213, 1263, 1569, 1738, 1768
BseJI	GATNNNNATC	2 cut(s)	926, 1866
BseLI	CCNNNNNNNGG	8 cut(s)	659, 1129, 1466, 1831, 1879, 1979, 2027, 2031
BseMI	GCAATG	2 cut(s)	446, 1761
BseMII	CTCAG	5 cut(s)	177, 309, 1383, 1509, 1560
BseNI	ACTGG	5 cut(s)	584, 990, 1225, 1461, 1787
BseRI	GAGGAG	3 cut(s)	526, 1226, 1730
BseXI	GCAGC	5 cut(s)	1127, 1127, 1244, 1535, 1563
BseYI	CCCAGC	1 cut(s)	451
BsgI	GTGCAG	3 cut(s)	93, 1251, 1787
Bsh1236I	CGCG	1 cut(s)	700
BshFI	GGCC	3 cut(s)	1337, 1342, 1459
BshVI	ATCGAT	1 cut(s)	116
BsiHKAI	GWGCWC	1 cut(s)	1979
BsiSI	CCGG	1 cut(s)	177
BslFI	GGGAC	4 cut(s)	1061, 1402, 1587, 2040
BslI	CCNNNNNNNGG	8 cut(s)	659, 1129, 1466, 1831, 1879, 1979, 2027, 2031
BsmAI	GTCTC	2 cut(s)	1442, 1671
BsmFI	GGGAC	4 cut(s)	1061, 1402, 1587, 2040
BsmI	GAATGC	2 cut(s)	669, 2016
BsnI	GGCC	3 cut(s)	1337, 1342, 1459
Bso31I	GGTCTC	1 cut(s)	1442
Bsp1286I	GDGCHC	2 cut(s)	1979, 2074
Bsp1407I	TGTACA	1 cut(s)	249
Bsp19I	CCATGG	1 cut(s)	1384
BspACI	CCGC	4 cut(s)	369, 1578, 2005, 2022
BspANI	GGCC	3 cut(s)	1337, 1342, 1459
BspCNI	CTCAG	5 cut(s)	178, 310, 1384, 1510, 1561
BspDI	ATCGAT	1 cut(s)	116
BspFNI	CGCG	1 cut(s)	700
BspHI	TCATGA	1 cut(s)	918
BspLI	GGNNCC	9 cut(s)	582, 990, 1223, 1575, 1576, 1807, 2055, 2056, 2071
BspMAI	CTGCAG	2 cut(s)	1414, 1553
BspMI	ACCTGC	1 cut(s)	450
BspQI	GCTCTTC	1 cut(s)	682
BspTNI	GGTCTC	1 cut(s)	1442
BsrBI	CCGCTC	1 cut(s)	2007
BsrDI	GCAATG	2 cut(s)	446, 1761
BsrGI	TGTACA	1 cut(s)	249
BsrI	ACTGG	5 cut(s)	584, 990, 1225, 1461, 1787
BssECI	CCNNGG	5 cut(s)	175, 312, 1384, 1559, 2025
BssNAI	GTATAC	1 cut(s)	236
BssT1I	CCWWGG	2 cut(s)	1384, 2025
Bst1107I	GTATAC	1 cut(s)	236
Bst2UI	CCWGG	3 cut(s)	314, 1339, 1880
Bst4CI	ACNGT	9 cut(s)	268, 478, 797, 957, 1132, 1195, 1201, 1686, 1974
Bst6I	CTCTTC	8 cut(s)	682, 826, 1546, 1617, 1629, 1689, 1892, 1942
BstAPI	GCANNNNNTGC	1 cut(s)	1765
BstAUI	TGTACA	1 cut(s)	249
BstC8I	GCNNGC	7 cut(s)	193, 259, 348, 367, 1059, 1556, 1648
BstDSI	CCRYGG	2 cut(s)	1384, 1559
BstENI	CCTNNNNNAGG	1 cut(s)	2029
BstF5I	GGATG	5 cut(s)	1213, 1263, 1569, 1738, 1768
BstFNI	CGCG	1 cut(s)	700
BstMAI	GTCTC	2 cut(s)	1442, 1671
BstMWI	GCNNNNNNNGC	6 cut(s)	356, 420, 968, 1124, 1765, 2013
BstNI	CCWGG	3 cut(s)	314, 1339, 1880
BstNSI	RCATGY	1 cut(s)	369
BstSCI	CCNGG	4 cut(s)	175, 312, 1337, 1878
BstSFI	CTRYAG	3 cut(s)	1200, 1410, 1549
BstUI	CGCG	1 cut(s)	700
BstV1I	GCAGC	5 cut(s)	1127, 1127, 1244, 1535, 1563
BstX2I	RGATCY	5 cut(s)	81, 580, 1322, 1882, 1901
BstXI	CCANNNNNNTGG	1 cut(s)	628
BstYI	RGATCY	5 cut(s)	81, 580, 1322, 1882, 1901
BstZ17I	GTATAC	1 cut(s)	236
Bsu15I	ATCGAT	1 cut(s)	116
BsuI	GTATCC	1 cut(s)	1772
BsuRI	GGCC	3 cut(s)	1337, 1342, 1459
BsuTUI	ATCGAT	1 cut(s)	116
BtgI	CCRYGG	2 cut(s)	1384, 1559
BtsCI	GGATG	5 cut(s)	1213, 1263, 1569, 1738, 1768
BtsI	GCAGTG	2 cut(s)	813, 1657
BveI	ACCTGC	1 cut(s)	450
Cac8I	GCNNGC	7 cut(s)	193, 259, 348, 367, 1059, 1556, 1648
CaiI	CAGNNNCTG	3 cut(s)	590, 1199, 1879
CciI	TCATGA	1 cut(s)	918
Cfr13I	GGNCC	6 cut(s)	335, 988, 1458, 1472, 1574, 2054
ClaI	ATCGAT	1 cut(s)	116
Csp6I	GTAC	5 cut(s)	250, 322, 723, 1216, 1741
CviQI	GTAC	5 cut(s)	250, 322, 723, 1216, 1741
DraI	TTTAAA	1 cut(s)	58
DraIII	CACNNNGTG	1 cut(s)	819
DriI	GACNNNNNGTC	1 cut(s)	1717
Eam1104I	CTCTTC	8 cut(s)	682, 826, 1546, 1617, 1629, 1689, 1892, 1942
Eam1105I	GACNNNNNGTC	1 cut(s)	1717
EarI	CTCTTC	8 cut(s)	682, 826, 1546, 1617, 1629, 1689, 1892, 1942
Eco130I	CCWWGG	2 cut(s)	1384, 2025
Eco147I	AGGCCT	1 cut(s)	1337
Eco24I	GRGCYC	1 cut(s)	2074
Eco31I	GGTCTC	1 cut(s)	1442
Eco32I	GATATC	1 cut(s)	483
Eco47I	GGWCC	5 cut(s)	335, 988, 1472, 1574, 2054
Eco57I	CTGAAG	2 cut(s)	1412, 1662
EcoNI	CCTNNNNNAGG	1 cut(s)	2029
EcoO109I	RGGNCCY	2 cut(s)	1574, 2054
EcoRII	CCWGG	3 cut(s)	312, 1337, 1878
EcoRV	GATATC	1 cut(s)	483
EcoT14I	CCWWGG	2 cut(s)	1384, 2025
EcoT22I	ATGCAT	1 cut(s)	669
EcoT38I	GRGCYC	1 cut(s)	2074
ErhI	CCWWGG	2 cut(s)	1384, 2025
FalI	AAGNNNNNCTT	2 cut(s)	1410, 1442
FaqI	GGGAC	4 cut(s)	1061, 1402, 1587, 2040
FauI	CCCGC	2 cut(s)	1585, 2029
FblI	GTMKAC	2 cut(s)	235, 1721
Fnu4HI	GCNGC	6 cut(s)	1116, 1141, 1233, 1549, 1552, 2005
FokI	GGATG	5 cut(s)	1220, 1270, 1576, 1745, 1775
FriOI	GRGCYC	1 cut(s)	2074
Fsp4HI	GCNGC	6 cut(s)	1116, 1141, 1233, 1549, 1552, 2005
FspBI	CTAG	4 cut(s)	417, 1290, 1751, 1899
GluI	GCNGC	6 cut(s)	1116, 1141, 1233, 1549, 1552, 2005
GsaI	CCCAGC	1 cut(s)	455
GsuI	CTGGAG	1 cut(s)	1853
HaeIII	GGCC	3 cut(s)	1337, 1342, 1459
HapII	CCGG	1 cut(s)	177
HincII	GTYRAC	1 cut(s)	1102
HindII	GTYRAC	1 cut(s)	1102
HpaII	CCGG	1 cut(s)	177
HphI	GGTGA	2 cut(s)	799, 1520
Hpy166II	GTNNAC	6 cut(s)	236, 859, 1102, 1597, 1711, 1722
Hpy188I	TCNGA	6 cut(s)	694, 709, 1299, 1570, 1906, 1918
Hpy188III	TCNNGA	8 cut(s)	152, 578, 800, 919, 1030, 1273, 1832, 2067
Hpy8I	GTNNAC	6 cut(s)	236, 859, 1102, 1597, 1711, 1722
HpyAV	CCTTC	8 cut(s)	149, 298, 379, 755, 845, 912, 1850, 2025
HpyCH4III	ACNGT	9 cut(s)	268, 478, 797, 957, 1132, 1195, 1201, 1686, 1974
HpyF10VI	GCNNNNNNNGC	6 cut(s)	356, 420, 968, 1124, 1765, 2013
KflI	GGGWCCC	2 cut(s)	1574, 2054
LguI	GCTCTTC	1 cut(s)	682
LmnI	GCTCC	5 cut(s)	513, 1165, 1805, 2012, 2069
Lsp1109I	GCAGC	5 cut(s)	1127, 1127, 1244, 1535, 1563
LweI	GCATC	3 cut(s)	298, 1078, 1303
MaeI	CTAG	4 cut(s)	417, 1290, 1751, 1899
MaeIII	GTNAC	3 cut(s)	1022, 1195, 1616
MbiI	CCGCTC	1 cut(s)	2007
MflI	RGATCY	5 cut(s)	81, 580, 1322, 1882, 1901
MhlI	GDGCHC	2 cut(s)	1979, 2074
MlyI	GAGTC	4 cut(s)	485, 1508, 1727, 1916
Mph1103I	ATGCAT	1 cut(s)	669
MroXI	GAANNNNTTC	3 cut(s)	168, 855, 1282
MseI	TTAA	6 cut(s)	57, 293, 734, 768, 870, 1086
MslI	CAYNNNNRTG	1 cut(s)	1614
MspA1I	CMGCKG	1 cut(s)	1588
MspI	CCGG	1 cut(s)	177
MspR9I	CCNGG	4 cut(s)	177, 314, 1339, 1880
Mva1269I	GAATGC	2 cut(s)	669, 2016
MvaI	CCWGG	3 cut(s)	314, 1339, 1880
MvnI	CGCG	1 cut(s)	700
MwoI	GCNNNNNNNGC	6 cut(s)	356, 420, 968, 1124, 1765, 2013
NciI	CCSGG	1 cut(s)	177
NcoI	CCATGG	1 cut(s)	1384
NlaIV	GGNNCC	9 cut(s)	582, 990, 1223, 1575, 1576, 1807, 2055, 2056, 2071
NmuCI	GTSAC	1 cut(s)	1616
NsiI	ATGCAT	1 cut(s)	669
NspI	RCATGY	1 cut(s)	369
PaeI	GCATGC	1 cut(s)	369
PagI	TCATGA	1 cut(s)	918
PceI	AGGCCT	1 cut(s)	1337
PciSI	GCTCTTC	1 cut(s)	682
PctI	GAATGC	2 cut(s)	669, 2016
PdmI	GAANNNNTTC	3 cut(s)	168, 855, 1282
PfeI	GAWTC	7 cut(s)	113, 372, 389, 599, 836, 1349, 1423
PflMI	CCANNNNNTGG	1 cut(s)	1879
PkrI	GCNGC	6 cut(s)	1117, 1142, 1234, 1550, 1553, 2006
PleI	GAGTC	4 cut(s)	485, 1507, 1726, 1915
PpsI	GAGTC	4 cut(s)	485, 1507, 1726, 1915
PpuMI	RGGWCCY	2 cut(s)	1574, 2054
PshBI	ATTAAT	1 cut(s)	734
Psp5II	RGGWCCY	2 cut(s)	1574, 2054
Psp6I	CCWGG	3 cut(s)	312, 1337, 1878
PspFI	CCCAGC	1 cut(s)	451
PspGI	CCWGG	3 cut(s)	312, 1337, 1878
PspN4I	GGNNCC	9 cut(s)	582, 990, 1223, 1575, 1576, 1807, 2055, 2056, 2071
PspPI	GGNCC	6 cut(s)	335, 988, 1458, 1472, 1574, 2054
PspPPI	RGGWCCY	2 cut(s)	1574, 2054
PstI	CTGCAG	2 cut(s)	1414, 1553
PstNI	CAGNNNCTG	3 cut(s)	590, 1199, 1879
PsuI	RGATCY	5 cut(s)	81, 580, 1322, 1882, 1901
PvuII	CAGCTG	1 cut(s)	1588
RsaI	GTAC	5 cut(s)	251, 323, 724, 1217, 1742
RsaNI	GTAC	5 cut(s)	250, 322, 723, 1216, 1741
RseI	CAYNNNNRTG	1 cut(s)	1614
SapI	GCTCTTC	1 cut(s)	682
SaqAI	TTAA	6 cut(s)	57, 293, 734, 768, 870, 1086
SatI	GCNGC	6 cut(s)	1116, 1141, 1233, 1549, 1552, 2005
Sau96I	GGNCC	6 cut(s)	335, 988, 1458, 1472, 1574, 2054
ScaI	AGTACT	1 cut(s)	724
SchI	GAGTC	4 cut(s)	485, 1508, 1727, 1916
ScrFI	CCNGG	4 cut(s)	177, 314, 1339, 1880
SduI	GDGCHC	2 cut(s)	1979, 2074
SfaNI	GCATC	3 cut(s)	298, 1078, 1303
SfcI	CTRYAG	3 cut(s)	1200, 1410, 1549
SinI	GGWCC	5 cut(s)	335, 988, 1472, 1574, 2054
SmiMI	CAYNNNNRTG	1 cut(s)	1614
SmlI	CTYRAG	1 cut(s)	862
SmoI	CTYRAG	1 cut(s)	862
SpeI	ACTAGT	1 cut(s)	416
SphI	GCATGC	1 cut(s)	369
SseBI	AGGCCT	1 cut(s)	1337
SsiI	CCGC	4 cut(s)	369, 1578, 2005, 2022
SspMI	CTAG	4 cut(s)	417, 1290, 1751, 1899
StuI	AGGCCT	1 cut(s)	1337
StyD4I	CCNGG	4 cut(s)	175, 312, 1337, 1878
StyI	CCWWGG	2 cut(s)	1384, 2025
TaaI	ACNGT	9 cut(s)	268, 478, 797, 957, 1132, 1195, 1201, 1686, 1974
TaqI	TCGA	4 cut(s)	116, 719, 805, 1502
TatI	WGTACW	4 cut(s)	249, 321, 722, 1215
TauI	GCSGC	1 cut(s)	2007
TfiI	GAWTC	7 cut(s)	113, 372, 389, 599, 836, 1349, 1423
Tru1I	TTAA	6 cut(s)	57, 293, 734, 768, 870, 1086
Tru9I	TTAA	6 cut(s)	57, 293, 734, 768, 870, 1086
TseFI	GTSAC	1 cut(s)	1616
TseI	GCWGC	5 cut(s)	1115, 1140, 1232, 1548, 1551
Tsp45I	GTSAC	1 cut(s)	1616
TspDTI	ATGAA	8 cut(s)	123, 540, 905, 907, 1647, 1671, 1707, 2003
TspGWI	ACGGA	6 cut(s)	382, 956, 1136, 1576, 1745, 1880
Van91I	CCANNNNNTGG	1 cut(s)	1879
VpaK11BI	GGWCC	5 cut(s)	335, 988, 1472, 1574, 2054
VspI	ATTAAT	1 cut(s)	734
XagI	CCTNNNNNAGG	1 cut(s)	2029
XapI	RAATTY	2 cut(s)	1818, 1991
XceI	RCATGY	1 cut(s)	369
XmiI	GTMKAC	2 cut(s)	235, 1721
XmnI	GAANNNNTTC	3 cut(s)	168, 855, 1282
XspI	CTAG	4 cut(s)	417, 1290, 1751, 1899
ZrmI	AGTACT	1 cut(s)	724
Zsp2I	ATGCAT	1 cut(s)	669

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.