Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000367.1

Orthogroup ID

OG0004419

Physical Location & Seq

Genomic Coordinates Reverse (-)

62383 .. 73791

Gene Structure 11409 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000367.1_g000014.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2532 bp

atgccgagtcagactgagtggaaccgccaactaccaagctctccggtaaagccagtcgttcgttccagggttcgagatggacccggttgtctatcattatctgatggtggggtgtgcgaggaattcggattgggatggggtgtttcggcggcggcgtcatggtcgacgatgagagggacggcggagaactgtgttggaggggaacaaacttcgccagacagccccgctgatgccgacaccgacgatgttgttgagattggacaagtattagatttgaaggagaaggggaaggttgcagaggagatggagggagatttgaaggagaaggggaaggttgcagaggagatggagggagtgttatcccagacacaaaacacacgcacggacacaacagtcaatcccacaccgattttcagagagatgagtgagtcggcgaaggttttgtacatagtggtggtggatggcgaggaagcgagagagaaagggaaagagtcttttcgatatacgcgtccggttttgcagagctctctgcaactcatgggatgcaaacctcgacacgccttcaagattagtcaacgagtttttgaattgataagaaacgtaagttcatgtaatgccttgcttccggacgggacagagaatgtttcccccagtaaagctgaggcttgcaagcatatggtttcagggaaagatcatagaagtaagagtgtaccatttgaaatgtacaaaacacgtacgactgttgtagttaggagagaaacttacttggatgttgtttgtgatgctctggctgagtacaagtatgttggtccaaatcagagggcagacttagttttggcatgcagaattcgagaacggaaggaatctgtaacagtactgttgtgcggcaccagtggctgtggaaaatctactttgtcttcattgctgggtagtaggttgggaatcacaactgtgatatctaccgactcgattcggcatatgatgaggagtttcgcagatgagaagcaaaatcctttactatgggcttcaacctatcatgcaggggagtgtttagatccagtggcagttgcagaagcaaaagccaaaaagaaagccaaaaaatcagctggaagttcacattcactttctaaagatggaatagttgatggctctatgtcagacgctggttcgagtactgctgaattgattggtccaaagcagatggccattgaaggattcaaggcacaaagtgagatggtaattgacagtcttgaccgtcttattactgcatgggaggaaagaaaagaatcagttattgtagaaggtgttcacttaagccttaattttgtgatggggcttatgaagaaacacccttcgatcataccattcatgatatttatcacaaatgaggataagcacttggagagatttgcagtacgtgcaaagtatatgacactggacccagcaaagaacaaatatgtgaagtacatccgaaacatcagaacaattcaagaatatctctgccagagggctgacaagcatcttgtccccaaaattaacaacactaatgttgacaagagtgtggctgcaatccatgcaacagtctttagctgcctccgtaggcgtgaagcaggggaacaactttatgatcccacgagaaatacagtaaccgtagtggatgaggagtataggaaccagcgtgcagccaattctttgagttcaaaggggatgtttcaacttatccagagaaaagggtcatctaggcatctgatggctcttgtaaatactgatggatctgtagcaaaggcttggcctgttgattcagtcgatcgtaatgggaagcctatattctgccatgggactgagatggagattggcagtgcagagcaagtgaatcttcagtttggtctctatggtttaagcgcttggcccaaagatggtggcccaagctgtgctggaagtgttgatgggtcaagggctgatgatactgagactgtaagtaggcatttctcttcttgctgcagctcaccacgatcggagggacctgccaaggagctgaaggaggacaactcggtgcatggcagcgatgaagaggttgatgaatcagctgatataggcagtgatgaggaattaagtgatgatgatgacaaacaagttgaagaagagatagggtcagtggatgaggagtctacgaaatcagatgaagagtatgaagacctggcaatgcaggacgttcaggggaatggatactggtcagatgatggtgctacggagcgcaagcttaagatattccctgttgctgagcacccatcagccaataaggatgtggataagtatcgccagaacctggatcttttccttagaactagaaacgagtcattttctgaaccactatgttcatatacttctctctttatggagaagaatgagatgacaatgccgtgctctggcaatatgaaaattagaaaacgccggtcccttagcattccagcattgggaaggcatgggtcaaaaacaaggggtcccatactttctggtgcccctcagtgctaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006066 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009058 GO:0009987 GO:0010264 GO:0017144 GO:0019637 GO:0019751 GO:0032958 GO:0033517 GO:0043647 GO:0044237 GO:0044281 GO:0044283 GO:0046165 GO:0046173 GO:0071704 GO:0090407 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA_33

Protein Analysis

843

Amino Acids

92.95

Weight (kDa)

5.7

Isoelectric Point (pI)

42.9

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004419)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45090 AT3G45090 AT5G60760 AT5G60760
fragaria_vesca	FvH4_3g31410 FvH4_3g31410 FvH4_3g31410 FvH4_3g31410 FvH4_3g31410 FvH4_3g31410
malus_domestica	MD03G1124200.v1.1 MD11G1141200.v1.1
prunus_persica	Prupe.6G106900_v2.0.a1 Prupe.6G106900_v2.0.a1 Prupe.6G106900_v2.0.a1
pyrus_communis	pycom11g11720 pycom11g11730 pycom11g11740
rosa_chinensis	RchiOBHm_Chr5g0058141
rosa_laevigata	RLG00000035194
rosa_multiflora	Rmu_sc0000367.1_g000014
rosa_roxburghii	Rroxscaffold_1G00022450
rosa_rugosa	Rorug05G0311300 Rorug05G0311400 Rorug05G0311500
rosa_samantha	Rh5AG379700 Rh5BG390800 Rh5CG414800 Rh5DG405500 Rh7BG226800 Rh7BG226900
rosa_wichuraiana	Rw5G035740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	87, 392
Acc36I	ACCTGC	1 cut(s)	2032
AccB1I	GGYRCC	2 cut(s)	887, 2516
AccB7I	CCANNNNNTGG	1 cut(s)	2326
AccI	GTMKAC	2 cut(s)	164, 2168
AccII	CGCG	1 cut(s)	508
AccIII	TCCGGA	1 cut(s)	625
AciI	CCGC	6 cut(s)	25, 149, 152, 182, 225, 885
AclWI	GGATC	4 cut(s)	1049, 1622, 1780, 2337
AcoI	YGGCCR	1 cut(s)	1203
AcsI	RAATTY	2 cut(s)	122, 846
AcuI	CTGAAG	2 cut(s)	1862, 2057
AcyI	GRCGYC	1 cut(s)	155
AdeI	CACNNNGTG	1 cut(s)	1229
AfaI	GTAC	9 cut(s)	446, 711, 725, 736, 797, 876, 1174, 1416, 1466
AfeI	AGCGCT	1 cut(s)	1903
AfiI	CCNNNNNNNGG	4 cut(s)	1916, 2326, 2426, 2474
AflII	CTTAAG	2 cut(s)	1312, 2261
AflIII	ACRYGT	2 cut(s)	506, 731
AjnI	CCWGG	3 cut(s)	65, 2196, 2325
AleI	CACNNNNGTG	1 cut(s)	950
Alw21I	GWGCWC	3 cut(s)	527, 2286, 2426
Alw26I	GTCTC	2 cut(s)	1892, 1964
AlwI	GGATC	4 cut(s)	1049, 1622, 1780, 2337
AlwNI	CAGNNNCTG	3 cut(s)	897, 1163, 2326
Aor13HI	TCCGGA	1 cut(s)	625
Aor51HI	AGCGCT	1 cut(s)	1903
AoxI	GGCC	4 cut(s)	1203, 1790, 1907, 1921
ApeKI	GCWGC	6 cut(s)	1565, 1590, 1682, 1998, 2001, 2061
ApoI	RAATTY	2 cut(s)	122, 846
Asp700I	GAANNNNTTC	1 cut(s)	1305
AspLEI	GCGC	2 cut(s)	1904, 2256
AspS9I	GGNCC	9 cut(s)	80, 809, 1190, 1438, 1908, 1922, 2021, 2454, 2501
AsuC2I	CCSGG	1 cut(s)	84
AsuHPI	GGTGA	1 cut(s)	1998
AvaII	GGWCC	7 cut(s)	80, 809, 1190, 1438, 2021, 2454, 2501
BaeGI	GKGCMC	1 cut(s)	2521
BalI	TGGCCA	1 cut(s)	1205
BanI	GGYRCC	2 cut(s)	887, 2516
BanII	GRGCYC	1 cut(s)	527
BarI	GAAGNNNNNNTAC	2 cut(s)	428, 460
BauI	CACGAG	1 cut(s)	1633
BbsI	GAAGAC	2 cut(s)	909, 2199
Bbv12I	GWGCWC	3 cut(s)	527, 2286, 2426
BbvCI	CCTCAGC	1 cut(s)	660
BbvI	GCAGC	6 cut(s)	1552, 1577, 1694, 1985, 2013, 2073
BceAI	ACGGC	2 cut(s)	195, 2404
BciT130I	CCWGG	3 cut(s)	67, 2198, 2327
BciVI	GTATCC	1 cut(s)	2219
BcnI	CCSGG	1 cut(s)	84
BcoDI	GTCTC	2 cut(s)	1892, 1964
BfaI	CTAG	2 cut(s)	1740, 2346
BfmI	CTRYAG	2 cut(s)	1776, 1999
BfoI	RGCGCY	1 cut(s)	1905
BfrI	CTTAAG	2 cut(s)	1312, 2261
BfuAI	ACCTGC	1 cut(s)	2032
BfuI	GTATCC	1 cut(s)	2219
BisI	GCNGC	9 cut(s)	150, 153, 886, 1566, 1591, 1683, 1999, 2002, 2062
BlpI	GCTNAGC	1 cut(s)	2280
BlsI	GCNGC	9 cut(s)	151, 154, 887, 1567, 1592, 1684, 2000, 2003, 2063
BmcAI	AGTACT	2 cut(s)	876, 1174
Bme1390I	CCNGG	4 cut(s)	67, 84, 2198, 2327
Bme18I	GGWCC	7 cut(s)	80, 809, 1190, 1438, 2021, 2454, 2501
BmgT120I	GGNCC	9 cut(s)	80, 809, 1190, 1438, 1908, 1922, 2021, 2454, 2501
BmrFI	CCNGG	4 cut(s)	67, 84, 2198, 2327
BmrI	ACTGGG	1 cut(s)	645
BmsI	GCATC	5 cut(s)	220, 533, 772, 1528, 1753
BmuI	ACTGGG	1 cut(s)	645
BpiI	GAAGAC	2 cut(s)	909, 2199
BplI	GAGNNNNNCTC	2 cut(s)	2033, 2065
Bpu10I	CCTNAGC	2 cut(s)	660, 2459
Bpu1102I	GCTNAGC	1 cut(s)	2280
BpuMI	CCSGG	1 cut(s)	84
BsaAI	YACGTR	2 cut(s)	734, 1418
BsaBI	GATNNNNATC	2 cut(s)	1376, 2313
BsaHI	GRCGYC	1 cut(s)	155
BsaI	GGTCTC	1 cut(s)	1892
BsaJI	CCNNGG	3 cut(s)	66, 1834, 2028
BsaWI	WCCGGW	3 cut(s)	43, 511, 625
BsaXI	ACNNNNNCTCC	2 cut(s)	341, 371
Bsc4I	CCNNNNNNNGG	4 cut(s)	1916, 2326, 2426, 2474
Bse118I	RCCGGY	1 cut(s)	2451
Bse1I	ACTGG	6 cut(s)	53, 651, 891, 1058, 1440, 2234
Bse3DI	GCAATG	2 cut(s)	920, 2208
Bse8I	GATNNNNATC	2 cut(s)	1376, 2313
BseAI	TCCGGA	1 cut(s)	625
BseBI	CCWGG	3 cut(s)	67, 2198, 2327
BseDI	CCNNGG	3 cut(s)	66, 1834, 2028
BseGI	GGATG	9 cut(s)	140, 466, 548, 775, 1467, 1663, 1713, 2164, 2308
BseJI	GATNNNNATC	2 cut(s)	1376, 2313
BseLI	CCNNNNNNNGG	4 cut(s)	1916, 2326, 2426, 2474
BseMI	GCAATG	2 cut(s)	920, 2208
BseMII	CTCAG	6 cut(s)	6, 651, 783, 1833, 1959, 2271
BseNI	ACTGG	6 cut(s)	53, 651, 891, 1058, 1440, 2234
BseRI	GAGGAG	5 cut(s)	314, 356, 1000, 1676, 2177
BseSI	GKGCMC	1 cut(s)	2521
BseXI	GCAGC	6 cut(s)	1552, 1577, 1694, 1985, 2013, 2073
BseYI	CCCAGC	2 cut(s)	925, 1441
BsgI	GTGCAG	2 cut(s)	1701, 1881
Bsh1236I	CGCG	1 cut(s)	508
Bsh1285I	CGRYCG	2 cut(s)	1810, 2015
BshFI	GGCC	4 cut(s)	1205, 1792, 1909, 1923
BshNI	GGYRCC	2 cut(s)	887, 2516
BsiEI	CGRYCG	2 cut(s)	1810, 2015
BsiHKAI	GWGCWC	3 cut(s)	527, 2286, 2426
BsiSI	CCGG	5 cut(s)	44, 84, 512, 626, 2452
BsiWI	CGTACG	1 cut(s)	734
BslFI	GGGAC	7 cut(s)	190, 646, 1511, 1852, 2034, 2440, 2487
BslI	CCNNNNNNNGG	4 cut(s)	1916, 2326, 2426, 2474
BsmAI	GTCTC	2 cut(s)	1892, 1964
BsmFI	GGGAC	7 cut(s)	190, 646, 1511, 1852, 2034, 2440, 2487
BsmI	GAATGC	1 cut(s)	2463
BsnI	GGCC	4 cut(s)	1205, 1792, 1909, 1923
Bso31I	GGTCTC	1 cut(s)	1892
Bsp1286I	GDGCHC	4 cut(s)	527, 2286, 2426, 2521
Bsp13I	TCCGGA	1 cut(s)	625
Bsp1407I	TGTACA	2 cut(s)	444, 723
Bsp143I	GATC	8 cut(s)	691, 1054, 1356, 1627, 1772, 1807, 2012, 2329
Bsp1720I	GCTNAGC	1 cut(s)	2280
Bsp19I	CCATGG	1 cut(s)	1834
BspACI	CCGC	6 cut(s)	25, 149, 152, 182, 225, 885
BspANI	GGCC	4 cut(s)	1205, 1792, 1909, 1923
BspCNI	CTCAG	6 cut(s)	7, 652, 784, 1834, 1960, 2272
BspEI	TCCGGA	1 cut(s)	625
BspFNI	CGCG	1 cut(s)	508
BspHI	TCATGA	1 cut(s)	1368
BspMAI	CTGCAG	1 cut(s)	2003
BspMI	ACCTGC	1 cut(s)	2032
BspPI	GGATC	4 cut(s)	1049, 1622, 1780, 2337
BspT107I	GGYRCC	2 cut(s)	887, 2516
BspTI	CTTAAG	2 cut(s)	1312, 2261
BspTNI	GGTCTC	1 cut(s)	1892
BsrDI	GCAATG	2 cut(s)	920, 2208
BsrFI	RCCGGY	1 cut(s)	2451
BsrGI	TGTACA	2 cut(s)	444, 723
BsrI	ACTGG	6 cut(s)	53, 651, 891, 1058, 1440, 2234
BssAI	RCCGGY	1 cut(s)	2451
BssECI	CCNNGG	3 cut(s)	66, 1834, 2028
BssMI	GATC	8 cut(s)	691, 1054, 1356, 1627, 1772, 1807, 2012, 2329
BssNI	GRCGYC	1 cut(s)	155
BssSI	CACGAG	1 cut(s)	1633
BssT1I	CCWWGG	2 cut(s)	1834, 2028
Bst2BI	CACGAG	1 cut(s)	1633
Bst2UI	CCWGG	3 cut(s)	67, 2198, 2327
Bst6I	CTCTTC	4 cut(s)	1996, 2064, 2136, 2178
BstACI	GRCGYC	1 cut(s)	155
BstAFI	CTTAAG	2 cut(s)	1312, 2261
BstAPI	GCANNNNNTGC	2 cut(s)	1418, 1574
BstAUI	TGTACA	2 cut(s)	444, 723
BstBAI	YACGTR	2 cut(s)	734, 1418
BstC8I	GCNNGC	5 cut(s)	667, 671, 841, 1680, 2258
BstDSI	CCRYGG	1 cut(s)	1834
BstF5I	GGATG	9 cut(s)	140, 466, 548, 775, 1467, 1663, 1713, 2164, 2308
BstFNI	CGCG	1 cut(s)	508
BstH2I	RGCGCY	1 cut(s)	1905
BstHHI	GCGC	2 cut(s)	1904, 2256
BstKTI	GATC	8 cut(s)	694, 1057, 1359, 1630, 1775, 1810, 2015, 2332
BstMAI	GTCTC	2 cut(s)	1892, 1964
BstMBI	GATC	8 cut(s)	691, 1054, 1356, 1627, 1772, 1807, 2012, 2329
BstMCI	CGRYCG	2 cut(s)	1810, 2015
BstMWI	GCNNNNNNNGC	3 cut(s)	894, 1418, 1574
BstNI	CCWGG	3 cut(s)	67, 2198, 2327
BstNSI	RCATGY	1 cut(s)	843
BstSCI	CCNGG	4 cut(s)	65, 82, 2196, 2325
BstSFI	CTRYAG	2 cut(s)	1776, 1999
BstSLI	GKGCMC	1 cut(s)	2521
BstUI	CGCG	1 cut(s)	508
BstV1I	GCAGC	6 cut(s)	1552, 1577, 1694, 1985, 2013, 2073
BstV2I	GAAGAC	2 cut(s)	909, 2199
BstX2I	RGATCY	3 cut(s)	1054, 1772, 2329
BstYI	RGATCY	3 cut(s)	1054, 1772, 2329
BsuI	GTATCC	1 cut(s)	2219
BsuRI	GGCC	4 cut(s)	1205, 1792, 1909, 1923
BtgI	CCRYGG	1 cut(s)	1834
BtgZI	GCGATG	1 cut(s)	2079
BtsCI	GGATG	9 cut(s)	140, 466, 548, 775, 1467, 1663, 1713, 2164, 2308
BtsI	GCAGTG	2 cut(s)	1864, 2104
BtsIMutI	CAGTG	7 cut(s)	898, 1065, 1433, 1864, 2104, 2160, 2531
BveI	ACCTGC	1 cut(s)	2032
Cac8I	GCNNGC	5 cut(s)	667, 671, 841, 1680, 2258
CaiI	CAGNNNCTG	3 cut(s)	897, 1163, 2326
CciI	TCATGA	1 cut(s)	1368
CfoI	GCGC	2 cut(s)	1904, 2256
Cfr10I	RCCGGY	1 cut(s)	2451
Cfr13I	GGNCC	9 cut(s)	80, 809, 1190, 1438, 1908, 1922, 2021, 2454, 2501
CseI	GACGC	3 cut(s)	144, 497, 1169
Csp6I	GTAC	9 cut(s)	445, 710, 724, 735, 796, 875, 1173, 1415, 1465
CspCI	CAANNNNNGTGG	2 cut(s)	1900, 1935
CviQI	GTAC	9 cut(s)	445, 710, 724, 735, 796, 875, 1173, 1415, 1465
DpnI	GATC	8 cut(s)	693, 1056, 1358, 1629, 1774, 1809, 2014, 2331
DpnII	GATC	8 cut(s)	691, 1054, 1356, 1627, 1772, 1807, 2012, 2329
DraIII	CACNNNGTG	1 cut(s)	1229
DrdI	GACNNNNNNGTC	2 cut(s)	87, 392
DseDI	GACNNNNNNGTC	2 cut(s)	87, 392
EaeI	YGGCCR	1 cut(s)	1203
Eam1104I	CTCTTC	4 cut(s)	1996, 2064, 2136, 2178
EarI	CTCTTC	4 cut(s)	1996, 2064, 2136, 2178
EciI	GGCGGA	1 cut(s)	197
Ecl136II	GAGCTC	1 cut(s)	525
Eco130I	CCWWGG	2 cut(s)	1834, 2028
Eco24I	GRGCYC	1 cut(s)	527
Eco31I	GGTCTC	1 cut(s)	1892
Eco32I	GATATC	1 cut(s)	957
Eco47I	GGWCC	7 cut(s)	80, 809, 1190, 1438, 2021, 2454, 2501
Eco47III	AGCGCT	1 cut(s)	1903
Eco53kI	GAGCTC	1 cut(s)	525
Eco57I	CTGAAG	2 cut(s)	1862, 2057
EcoICRI	GAGCTC	1 cut(s)	525
EcoO109I	RGGNCCY	2 cut(s)	2021, 2501
EcoRI	GAATTC	2 cut(s)	122, 846
EcoRII	CCWGG	3 cut(s)	65, 2196, 2325
EcoRV	GATATC	1 cut(s)	957
EcoT14I	CCWWGG	2 cut(s)	1834, 2028
EcoT38I	GRGCYC	1 cut(s)	527
ErhI	CCWWGG	2 cut(s)	1834, 2028
FalI	AAGNNNNNCTT	2 cut(s)	1860, 1892
FaqI	GGGAC	7 cut(s)	190, 646, 1511, 1852, 2034, 2440, 2487
FauI	CCCGC	1 cut(s)	232
FauNDI	CATATG	2 cut(s)	675, 978
FblI	GTMKAC	2 cut(s)	164, 2168
Fnu4HI	GCNGC	9 cut(s)	150, 153, 886, 1566, 1591, 1683, 1999, 2002, 2062
FokI	GGATG	9 cut(s)	147, 473, 555, 782, 1454, 1670, 1720, 2171, 2315
FriOI	GRGCYC	1 cut(s)	527
Fsp4HI	GCNGC	9 cut(s)	150, 153, 886, 1566, 1591, 1683, 1999, 2002, 2062
FspBI	CTAG	2 cut(s)	1740, 2346
GlaI	GCGC	2 cut(s)	1903, 2255
GluI	GCNGC	9 cut(s)	150, 153, 886, 1566, 1591, 1683, 1999, 2002, 2062
GsaI	CCCAGC	2 cut(s)	929, 1445
HaeII	RGCGCY	1 cut(s)	1905
HaeIII	GGCC	4 cut(s)	1205, 1792, 1909, 1923
HapII	CCGG	5 cut(s)	44, 84, 512, 626, 2452
HgaI	GACGC	3 cut(s)	144, 497, 1169
HhaI	GCGC	2 cut(s)	1904, 2256
Hin1I	GRCGYC	1 cut(s)	155
Hin6I	GCGC	2 cut(s)	1902, 2254
HinP1I	GCGC	2 cut(s)	1902, 2254
HincII	GTYRAC	3 cut(s)	165, 575, 1552
HindII	GTYRAC	3 cut(s)	165, 575, 1552
HindIII	AAGCTT	1 cut(s)	2258
HpaII	CCGG	5 cut(s)	44, 84, 512, 626, 2452
HphI	GGTGA	1 cut(s)	1998
Hpy166II	GTNNAC	7 cut(s)	165, 575, 710, 1115, 1309, 1552, 2169
Hpy188III	TCNNGA	8 cut(s)	74, 565, 626, 851, 1250, 1369, 1490, 1723
Hpy8I	GTNNAC	7 cut(s)	165, 575, 710, 1115, 1309, 1552, 2169
Hpy99I	CGWCG	2 cut(s)	169, 245
HpyCH4IV	ACGT	4 cut(s)	600, 733, 1417, 2211
HpyF10VI	GCNNNNNNNGC	3 cut(s)	894, 1418, 1574
HpySE526I	ACGT	4 cut(s)	600, 733, 1417, 2211
Hsp92I	GRCGYC	1 cut(s)	155
HspAI	GCGC	2 cut(s)	1902, 2254
KflI	GGGWCCC	1 cut(s)	2501
Kpn2I	TCCGGA	1 cut(s)	625
Kzo9I	GATC	8 cut(s)	691, 1054, 1356, 1627, 1772, 1807, 2012, 2329
LmnI	GCTCC	2 cut(s)	2032, 2251
Lsp1109I	GCAGC	6 cut(s)	1552, 1577, 1694, 1985, 2013, 2073
LweI	GCATC	5 cut(s)	220, 533, 772, 1528, 1753
MaeI	CTAG	2 cut(s)	1740, 2346
MaeII	ACGT	4 cut(s)	600, 733, 1417, 2211
MaeIII	GTNAC	2 cut(s)	868, 1645
MalI	GATC	8 cut(s)	693, 1056, 1358, 1629, 1774, 1809, 2014, 2331
MboI	GATC	8 cut(s)	691, 1054, 1356, 1627, 1772, 1807, 2012, 2329
MflI	RGATCY	3 cut(s)	1054, 1772, 2329
MhlI	GDGCHC	4 cut(s)	527, 2286, 2426, 2521
MlsI	TGGCCA	1 cut(s)	1205
MluI	ACGCGT	1 cut(s)	506
MluNI	TGGCCA	1 cut(s)	1205
MlyI	GAGTC	6 cut(s)	16, 437, 500, 959, 2174, 2363
MmeI	TCCRAC	1 cut(s)	175
Mox20I	TGGCCA	1 cut(s)	1205
MroI	TCCGGA	1 cut(s)	625
MroXI	GAANNNNTTC	1 cut(s)	1305
MscI	TGGCCA	1 cut(s)	1205
MseI	TTAA	6 cut(s)	1313, 1320, 1536, 1898, 2111, 2262
MslI	CAYNNNNRTG	2 cut(s)	452, 950
Msp20I	TGGCCA	1 cut(s)	1205
MspA1I	CMGCKG	3 cut(s)	227, 1106, 2087
MspCI	CTTAAG	2 cut(s)	1312, 2261
MspI	CCGG	5 cut(s)	44, 84, 512, 626, 2452
MspR9I	CCNGG	4 cut(s)	67, 84, 2198, 2327
Mva1269I	GAATGC	1 cut(s)	2463
MvaI	CCWGG	3 cut(s)	67, 2198, 2327
MvnI	CGCG	1 cut(s)	508
MwoI	GCNNNNNNNGC	3 cut(s)	894, 1418, 1574
NciI	CCSGG	1 cut(s)	84
NcoI	CCATGG	1 cut(s)	1834
NdeI	CATATG	2 cut(s)	675, 978
NdeII	GATC	8 cut(s)	691, 1054, 1356, 1627, 1772, 1807, 2012, 2329
NmeAIII	GCCGAG	1 cut(s)	30
NspI	RCATGY	1 cut(s)	843
OliI	CACNNNNGTG	1 cut(s)	950
PaeI	GCATGC	1 cut(s)	843
PagI	TCATGA	1 cut(s)	1368
PcsI	WCGNNNNNNNCGW	2 cut(s)	152, 505
PctI	GAATGC	1 cut(s)	2463
PdmI	GAANNNNTTC	1 cut(s)	1305
PfeI	GAWTC	8 cut(s)	863, 942, 970, 1215, 1286, 1799, 1873, 2081
Pfl23II	CGTACG	1 cut(s)	734
PflMI	CCANNNNNTGG	1 cut(s)	2326
PkrI	GCNGC	9 cut(s)	151, 154, 887, 1567, 1592, 1684, 2000, 2003, 2063
Ple19I	CGATCG	2 cut(s)	1810, 2015
PleI	GAGTC	6 cut(s)	15, 436, 499, 959, 2173, 2362
PpsI	GAGTC	6 cut(s)	15, 436, 499, 959, 2173, 2362
Ppu21I	YACGTR	2 cut(s)	734, 1418
PpuMI	RGGWCCY	2 cut(s)	2021, 2501
Psp124BI	GAGCTC	1 cut(s)	527
Psp5II	RGGWCCY	2 cut(s)	2021, 2501
Psp6I	CCWGG	3 cut(s)	65, 2196, 2325
PspFI	CCCAGC	2 cut(s)	925, 1441
PspGI	CCWGG	3 cut(s)	65, 2196, 2325
PspLI	CGTACG	1 cut(s)	734
PspPI	GGNCC	9 cut(s)	80, 809, 1190, 1438, 1908, 1922, 2021, 2454, 2501
PspPPI	RGGWCCY	2 cut(s)	2021, 2501
PsrI	GAACNNNNNNTAC	2 cut(s)	1290, 1322
PstI	CTGCAG	1 cut(s)	2003
PstNI	CAGNNNCTG	3 cut(s)	897, 1163, 2326
PsuI	RGATCY	3 cut(s)	1054, 1772, 2329
PvuI	CGATCG	2 cut(s)	1810, 2015
PvuII	CAGCTG	2 cut(s)	1106, 2087
RsaI	GTAC	9 cut(s)	446, 711, 725, 736, 797, 876, 1174, 1416, 1466
RsaNI	GTAC	9 cut(s)	445, 710, 724, 735, 796, 875, 1173, 1415, 1465
RseI	CAYNNNNRTG	2 cut(s)	452, 950
SacI	GAGCTC	1 cut(s)	527
SalI	GTCGAC	1 cut(s)	163
SaqAI	TTAA	6 cut(s)	1313, 1320, 1536, 1898, 2111, 2262
SatI	GCNGC	9 cut(s)	150, 153, 886, 1566, 1591, 1683, 1999, 2002, 2062
Sau3AI	GATC	8 cut(s)	691, 1054, 1356, 1627, 1772, 1807, 2012, 2329
Sau96I	GGNCC	9 cut(s)	80, 809, 1190, 1438, 1908, 1922, 2021, 2454, 2501
ScaI	AGTACT	2 cut(s)	876, 1174
SchI	GAGTC	6 cut(s)	16, 437, 500, 959, 2174, 2363
ScrFI	CCNGG	4 cut(s)	67, 84, 2198, 2327
SduI	GDGCHC	4 cut(s)	527, 2286, 2426, 2521
SfaNI	GCATC	5 cut(s)	220, 533, 772, 1528, 1753
SfcI	CTRYAG	2 cut(s)	1776, 1999
SinI	GGWCC	7 cut(s)	80, 809, 1190, 1438, 2021, 2454, 2501
SmiMI	CAYNNNNRTG	2 cut(s)	452, 950
SmlI	CTYRAG	2 cut(s)	1312, 2261
SmoI	CTYRAG	2 cut(s)	1312, 2261
SphI	GCATGC	1 cut(s)	843
SsiI	CCGC	6 cut(s)	25, 149, 152, 182, 225, 885
SspMI	CTAG	2 cut(s)	1740, 2346
SstI	GAGCTC	1 cut(s)	527
StyD4I	CCNGG	4 cut(s)	65, 82, 2196, 2325
StyI	CCWWGG	2 cut(s)	1834, 2028
TaiI	ACGT	4 cut(s)	603, 736, 1420, 2214
TaqI	TCGA	9 cut(s)	73, 164, 499, 553, 850, 968, 1169, 1355, 1806
TatI	WGTACW	6 cut(s)	444, 723, 795, 874, 1172, 1464
TauI	GCSGC	3 cut(s)	152, 155, 888
TfiI	GAWTC	8 cut(s)	863, 942, 970, 1215, 1286, 1799, 1873, 2081
Tru1I	TTAA	6 cut(s)	1313, 1320, 1536, 1898, 2111, 2262
Tru9I	TTAA	6 cut(s)	1313, 1320, 1536, 1898, 2111, 2262
TscAI	CASTG	7 cut(s)	898, 1065, 1440, 1864, 2104, 2160, 2531
TseI	GCWGC	6 cut(s)	1565, 1590, 1682, 1998, 2001, 2061
TspGWI	ACGGA	4 cut(s)	398, 871, 1586, 2264
TspRI	CASTG	7 cut(s)	898, 1065, 1440, 1864, 2104, 2160, 2531
Van91I	CCANNNNNTGG	1 cut(s)	2326
Vha464I	CTTAAG	2 cut(s)	1312, 2261
VpaK11BI	GGWCC	7 cut(s)	80, 809, 1190, 1438, 2021, 2454, 2501
XapI	RAATTY	2 cut(s)	122, 846
XceI	RCATGY	1 cut(s)	843
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2302
XmiI	GTMKAC	2 cut(s)	164, 2168
XmnI	GAANNNNTTC	1 cut(s)	1305
XspI	CTAG	2 cut(s)	1740, 2346
ZrmI	AGTACT	2 cut(s)	876, 1174

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.