Rh5AG379700

P-loop NTPase domain-containing protein LPA1 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0004419
Physical Location & Seq
Reverse (-)
64818601 .. 64824482
5882 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG379700.1

Sequence Viewer

Length: 2106 bp
ATGAGTGAGTCCGCGAAGGTTTTGTACATAGTGGTGGTGGATGGCGAGGAAGCGAGAGAAAAAGGGAAGGAGTCTTTTCGATATACGCGTCCGGTTTTGCAGAGCTCTCTGCAACTCATGGGATGCAAACCTCGACACGCCTTCAAGATTAGTCAACAAGTTTTTGAATTGATAAGAAACGTAAGTTCATGTAATGCCTTGCTTCCGGACGGGACAGAGAATGTTTTCCCCAGTAAAGCTGAGGCTTGCAAGCATATGGTTTCAGGGAAAGATCATAGAAGTAAGAGTGTACCATTTGAAATGTACAAAACACGTACGACTGTTGTAGTTAGGAGAGAAACTTACTTGGATGTTGTTTGTGATGCTCTGGCTGAGTACAAGTATGTTGGTCCAAATCAGAGGGCAGACTTAGTTTTGGCATGCAGAATTCGAGAACGGAAGGAATCTGTAACAGTACTGTTGTGCGGCACCAGTGGCTGTGGAAAATCTACTTTGTCTTCATTGCTGGGTAGTAGGTTGGGAATCACAACTGTGATATCTACCGACTCGATTCGGCACATGATGAGGAGTTTCGCAGATGAGAAGCAAAATCCTTTACTATGGGCTTCAACCTATCATGCAGGGGAGTGTTTAGATCCAGTGGCAGTTGCAGAAGCAAAAGCCAAAAAGAAAGCCAAAAAATCAGCTGGAAGTTCACATTCACTTTCTAAAGATGGAATAGTTGATGGCTCTATGTCAGACGCTGGTTCGAGTACTGCTGAATTGATCGGTCCAAAGCAGATGGCCATTGAAGGATTCAAGGCACAAAGTGAGATGGTAATTGACAGTCTTGACCGTCTTATTACTGCATGGGAGGAAAGAAAAGAATCAGTTATTGTAGAAGGTGTTCACTTAAGCCTTAATTTTGTGATGGGGCTTATGAAGAAACACCCTTCGATCATACCATTCATGATATTTATCACAAATGAGGATAAGCACTTGGAGAGATTTGCAGTACGTGCAAAGTATATGACACTGGACCCAGCAAAGAACAAATATGTGAAGTACATCCGAAACATCAGAACAATTCAAGAATATCTCTGCCAGAGGGCTGACAAGCATCTTGTCCCCAAAATTAACAACACTAATGTTGACAAGAGTGTGGCTGCAATCCATGCAACAGTCTTTAGCTGCCTCCGTAGGCGTGAAGCAGGGGAACAACTTTATGATCCCACGAGAAATACAGTAACCGTAGTGGATGAGGAGTATAGGAACCAGCGTGCAGCCAATTCTTTGAGTTCAAAGGGGATGTTTCAACTTATCCAGAGAAAAGGGTCATCTAGGCATCTGATGGCTCTTGTAAATACTGATGGATCTGTAGCAAAGGCTTGGCCTGTTGATTCAGTCGATCGTAATGGGAAGCCTATATTCTGCCATGGGACTGAGATGGAGATTGGCAGTGCAGAGCAAGTGAATCTTCAGTTTGGTCTCTATGGTTTAAGCGCTTGGCCCAAAGATGGTGGCCCAAGCTGTGCTGGAAGTGTTGATGGGTCAAGGGCTGATGATACTGAGACTGTAAGTAGGCATTTCTCTTCTTGCTGCAGCTCACCACGATCGGAGGGACCTGCCAAGGAGCTTAAGGAGGACAACTCGGTGCATGGCAGCGATGAAGAGGTTGATGAATCAGTTGATGTAGGCAGTGATGAGGAATTAAGTGATGATGATGACAAACAAGTTGAAGAAGAGATAGGGTCAGTGGATGAGGAGTCTACGAAATCAGATGAAGAGTATGAAGACCTGGCAATGCAGGACGTTCAGGGGAATGGATACTGGTCAGATGATGGTGCTACGGAGCGCAGGCTTAAGATATTCCCTGTTGCTGAGCACCCATCAGCCAATAAGGATGTGGATAAGTATCGCCAGAACCTGGATCTTTTCCTTAGAACTAGAAACGAGTCATTTTCTGAACCACTATGTTCATATACTTCTCTCTTTATGGAGAAGAATGAGATGACAATGCCGTGCTCTGGCAATATGAAAATTAGAAAACGCCGGTCCCTTAGCATTCCAGCATTGGGAAGGCATGGGTCAAAAACAAGGGGTCCCATACTTTCTGGTGCCCCTTAG

Protein Analysis

701

Amino Acids

77.83

Weight (kDa)

6.33

Isoelectric Point (pI)

43.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_33 PF13671 152 - 198 7.1e-06 AAA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1612
AccB1I GGYRCC 2 cut(s) 467, 2096
AccB7I CCANNNNNTGG 1 cut(s) 1906
AccI GTMKAC 1 cut(s) 1748
AccII CGCG 2 cut(s) 14, 88
AccIII TCCGGA 1 cut(s) 205
AciI CCGC 2 cut(s) 12, 465
AclWI GGATC 4 cut(s) 629, 1202, 1360, 1917
AcoI YGGCCR 1 cut(s) 783
AcsI RAATTY 1 cut(s) 426
AcuI CTGAAG 1 cut(s) 1442
AdeI CACNNNGTG 1 cut(s) 809
AfaI GTAC 9 cut(s) 26, 291, 305, 316, 377, 456, 754, 996, 1046
AfeI AGCGCT 1 cut(s) 1483
AfiI CCNNNNNNNGG 4 cut(s) 1496, 1906, 2006, 2054
AflII CTTAAG 3 cut(s) 892, 1616, 1841
AflIII ACRYGT 2 cut(s) 86, 311
AjnI CCWGG 2 cut(s) 1776, 1905
AleI CACNNNNGTG 1 cut(s) 530
AluBI AGCT 7 cut(s) 105, 239, 686, 1170, 1509, 1584, 1615
AluI AGCT 7 cut(s) 105, 239, 686, 1170, 1509, 1584, 1615
Alw21I GWGCWC 3 cut(s) 107, 1866, 2006
Alw26I GTCTC 2 cut(s) 1472, 1544
AlwI GGATC 4 cut(s) 629, 1202, 1360, 1917
AlwNI CAGNNNCTG 3 cut(s) 477, 743, 1906
Aor13HI TCCGGA 1 cut(s) 205
Aor51HI AGCGCT 1 cut(s) 1483
AoxI GGCC 4 cut(s) 783, 1370, 1487, 1501
ApeKI GCWGC 6 cut(s) 1145, 1170, 1262, 1578, 1581, 1641
ApoI RAATTY 1 cut(s) 426
Asp700I GAANNNNTTC 2 cut(s) 224, 885
AspLEI GCGC 2 cut(s) 1484, 1836
AspS9I GGNCC 8 cut(s) 389, 770, 1018, 1488, 1502, 1601, 2034, 2081
AsuHPI GGTGA 1 cut(s) 1578
AvaII GGWCC 6 cut(s) 389, 770, 1018, 1601, 2034, 2081
BaeGI GKGCMC 1 cut(s) 2101
BalI TGGCCA 1 cut(s) 785
BanI GGYRCC 2 cut(s) 467, 2096
BanII GRGCYC 1 cut(s) 107
BarI GAAGNNNNNNTAC 2 cut(s) 8, 40
BauI CACGAG 1 cut(s) 1213
BbsI GAAGAC 2 cut(s) 489, 1779
Bbv12I GWGCWC 3 cut(s) 107, 1866, 2006
BbvCI CCTCAGC 1 cut(s) 240
BbvI GCAGC 6 cut(s) 1132, 1157, 1274, 1565, 1593, 1653
BceAI ACGGC 1 cut(s) 1984
BciT130I CCWGG 2 cut(s) 1778, 1907
BciVI GTATCC 1 cut(s) 1799
BcoDI GTCTC 2 cut(s) 1472, 1544
BfaI CTAG 2 cut(s) 1320, 1926
BfmI CTRYAG 2 cut(s) 1356, 1579
BfoI RGCGCY 1 cut(s) 1485
BfrI CTTAAG 3 cut(s) 892, 1616, 1841
BfuAI ACCTGC 1 cut(s) 1612
BfuI GTATCC 1 cut(s) 1799
BisI GCNGC 7 cut(s) 466, 1146, 1171, 1263, 1579, 1582, 1642
BlpI GCTNAGC 1 cut(s) 1860
BlsI GCNGC 7 cut(s) 467, 1147, 1172, 1264, 1580, 1583, 1643
BmcAI AGTACT 2 cut(s) 456, 754
Bme1390I CCNGG 2 cut(s) 1778, 1907
Bme18I GGWCC 6 cut(s) 389, 770, 1018, 1601, 2034, 2081
BmgT120I GGNCC 8 cut(s) 389, 770, 1018, 1488, 1502, 1601, 2034, 2081
BmiI GGNNCC 8 cut(s) 469, 1020, 1253, 1602, 2036, 2082, 2083, 2098
BmrFI CCNGG 2 cut(s) 1778, 1907
BmrI ACTGGG 1 cut(s) 225
BmsI GCATC 4 cut(s) 113, 352, 1108, 1333
BmuI ACTGGG 1 cut(s) 225
BpiI GAAGAC 2 cut(s) 489, 1779
BplI GAGNNNNNCTC 2 cut(s) 1613, 1645
Bpu10I CCTNAGC 2 cut(s) 240, 2039
Bpu1102I GCTNAGC 1 cut(s) 1860
BsaAI YACGTR 2 cut(s) 314, 998
BsaBI GATNNNNATC 2 cut(s) 956, 1893
BsaI GGTCTC 1 cut(s) 1472
BsaJI CCNNGG 2 cut(s) 1414, 1608
BsaWI WCCGGW 2 cut(s) 91, 205
Bsc4I CCNNNNNNNGG 4 cut(s) 1496, 1906, 2006, 2054
Bse118I RCCGGY 1 cut(s) 2031
Bse1I ACTGG 5 cut(s) 231, 471, 638, 1020, 1814
Bse3DI GCAATG 2 cut(s) 500, 1788
Bse8I GATNNNNATC 2 cut(s) 956, 1893
BseAI TCCGGA 1 cut(s) 205
BseBI CCWGG 2 cut(s) 1778, 1907
BseDI CCNNGG 2 cut(s) 1414, 1608
BseGI GGATG 8 cut(s) 46, 128, 355, 1047, 1243, 1293, 1744, 1888
BseJI GATNNNNATC 2 cut(s) 956, 1893
BseLI CCNNNNNNNGG 4 cut(s) 1496, 1906, 2006, 2054
BseMI GCAATG 2 cut(s) 500, 1788
BseMII CTCAG 5 cut(s) 231, 363, 1413, 1539, 1851
BseNI ACTGG 5 cut(s) 231, 471, 638, 1020, 1814
BseRI GAGGAG 3 cut(s) 580, 1256, 1757
BseSI GKGCMC 1 cut(s) 2101
BseXI GCAGC 6 cut(s) 1132, 1157, 1274, 1565, 1593, 1653
BseYI CCCAGC 2 cut(s) 505, 1021
BsgI GTGCAG 2 cut(s) 1281, 1461
Bsh1236I CGCG 2 cut(s) 14, 88
Bsh1285I CGRYCG 2 cut(s) 1390, 1595
BshFI GGCC 4 cut(s) 785, 1372, 1489, 1503
BshNI GGYRCC 2 cut(s) 467, 2096
BsiEI CGRYCG 2 cut(s) 1390, 1595
BsiHKAI GWGCWC 3 cut(s) 107, 1866, 2006
BsiSI CCGG 3 cut(s) 92, 206, 2032
BsiWI CGTACG 1 cut(s) 314
BslFI GGGAC 6 cut(s) 226, 1091, 1432, 1614, 2020, 2067
BslI CCNNNNNNNGG 4 cut(s) 1496, 1906, 2006, 2054
BsmAI GTCTC 2 cut(s) 1472, 1544
BsmFI GGGAC 6 cut(s) 226, 1091, 1432, 1614, 2020, 2067
BsmI GAATGC 1 cut(s) 2043
BsnI GGCC 4 cut(s) 785, 1372, 1489, 1503
Bso31I GGTCTC 1 cut(s) 1472
Bsp1286I GDGCHC 4 cut(s) 107, 1866, 2006, 2101
Bsp13I TCCGGA 1 cut(s) 205
Bsp1407I TGTACA 2 cut(s) 24, 303
Bsp143I GATC 9 cut(s) 271, 634, 765, 936, 1207, 1352, 1387, 1592, 1909
Bsp1720I GCTNAGC 1 cut(s) 1860
Bsp19I CCATGG 1 cut(s) 1414
BspACI CCGC 2 cut(s) 12, 465
BspANI GGCC 4 cut(s) 785, 1372, 1489, 1503
BspCNI CTCAG 5 cut(s) 232, 364, 1414, 1540, 1852
BspEI TCCGGA 1 cut(s) 205
BspFNI CGCG 2 cut(s) 14, 88
BspHI TCATGA 1 cut(s) 948
BspLI GGNNCC 8 cut(s) 469, 1020, 1253, 1602, 2036, 2082, 2083, 2098
BspMAI CTGCAG 1 cut(s) 1583
BspMI ACCTGC 1 cut(s) 1612
BspPI GGATC 4 cut(s) 629, 1202, 1360, 1917
BspT107I GGYRCC 2 cut(s) 467, 2096
BspTI CTTAAG 3 cut(s) 892, 1616, 1841
BspTNI GGTCTC 1 cut(s) 1472
BsrDI GCAATG 2 cut(s) 500, 1788
BsrFI RCCGGY 1 cut(s) 2031
BsrGI TGTACA 2 cut(s) 24, 303
BsrI ACTGG 5 cut(s) 231, 471, 638, 1020, 1814
BssAI RCCGGY 1 cut(s) 2031
BssECI CCNNGG 2 cut(s) 1414, 1608
BssMI GATC 9 cut(s) 271, 634, 765, 936, 1207, 1352, 1387, 1592, 1909
BssSI CACGAG 1 cut(s) 1213
BssT1I CCWWGG 2 cut(s) 1414, 1608
Bst2BI CACGAG 1 cut(s) 1213
Bst2UI CCWGG 2 cut(s) 1778, 1907
Bst6I CTCTTC 4 cut(s) 1576, 1644, 1716, 1758
BstAFI CTTAAG 3 cut(s) 892, 1616, 1841
BstAPI GCANNNNNTGC 2 cut(s) 998, 1154
BstAUI TGTACA 2 cut(s) 24, 303
BstBAI YACGTR 2 cut(s) 314, 998
BstC8I GCNNGC 5 cut(s) 247, 251, 421, 1260, 1838
BstDEI CTNAG 9 cut(s) 240, 372, 409, 1422, 1548, 1860, 1919, 2039, 2103
BstDSI CCRYGG 1 cut(s) 1414
BstF5I GGATG 8 cut(s) 46, 128, 355, 1047, 1243, 1293, 1744, 1888
BstFNI CGCG 2 cut(s) 14, 88
BstH2I RGCGCY 1 cut(s) 1485
BstHHI GCGC 2 cut(s) 1484, 1836
BstKTI GATC 9 cut(s) 274, 637, 768, 939, 1210, 1355, 1390, 1595, 1912
BstMAI GTCTC 2 cut(s) 1472, 1544
BstMBI GATC 9 cut(s) 271, 634, 765, 936, 1207, 1352, 1387, 1592, 1909
BstMCI CGRYCG 2 cut(s) 1390, 1595
BstMWI GCNNNNNNNGC 3 cut(s) 474, 998, 1154
BstNI CCWGG 2 cut(s) 1778, 1907
BstNSI RCATGY 1 cut(s) 423
BstSCI CCNGG 2 cut(s) 1776, 1905
BstSFI CTRYAG 2 cut(s) 1356, 1579
BstSLI GKGCMC 1 cut(s) 2101
BstUI CGCG 2 cut(s) 14, 88
BstV1I GCAGC 6 cut(s) 1132, 1157, 1274, 1565, 1593, 1653
BstV2I GAAGAC 2 cut(s) 489, 1779
BstX2I RGATCY 3 cut(s) 634, 1352, 1909
BstYI RGATCY 3 cut(s) 634, 1352, 1909
BsuI GTATCC 1 cut(s) 1799
BsuRI GGCC 4 cut(s) 785, 1372, 1489, 1503
BtgI CCRYGG 1 cut(s) 1414
BtgZI GCGATG 1 cut(s) 1659
BtsCI GGATG 8 cut(s) 46, 128, 355, 1047, 1243, 1293, 1744, 1888
BtsI GCAGTG 2 cut(s) 1444, 1684
BtsIMutI CAGTG 6 cut(s) 478, 645, 1013, 1444, 1684, 1740
BveI ACCTGC 1 cut(s) 1612
Cac8I GCNNGC 5 cut(s) 247, 251, 421, 1260, 1838
CaiI CAGNNNCTG 3 cut(s) 477, 743, 1906
CciI TCATGA 1 cut(s) 948
CfoI GCGC 2 cut(s) 1484, 1836
Cfr10I RCCGGY 1 cut(s) 2031
Cfr13I GGNCC 8 cut(s) 389, 770, 1018, 1488, 1502, 1601, 2034, 2081
CseI GACGC 2 cut(s) 77, 749
Csp6I GTAC 9 cut(s) 25, 290, 304, 315, 376, 455, 753, 995, 1045
CspCI CAANNNNNGTGG 2 cut(s) 1480, 1515
CviQI GTAC 9 cut(s) 25, 290, 304, 315, 376, 455, 753, 995, 1045
DdeI CTNAG 9 cut(s) 240, 372, 409, 1422, 1548, 1860, 1919, 2039, 2103
DpnI GATC 9 cut(s) 273, 636, 767, 938, 1209, 1354, 1389, 1594, 1911
DpnII GATC 9 cut(s) 271, 634, 765, 936, 1207, 1352, 1387, 1592, 1909
DraIII CACNNNGTG 1 cut(s) 809
EaeI YGGCCR 1 cut(s) 783
Eam1104I CTCTTC 4 cut(s) 1576, 1644, 1716, 1758
EarI CTCTTC 4 cut(s) 1576, 1644, 1716, 1758
Ecl136II GAGCTC 1 cut(s) 105
Eco130I CCWWGG 2 cut(s) 1414, 1608
Eco24I GRGCYC 1 cut(s) 107
Eco31I GGTCTC 1 cut(s) 1472
Eco32I GATATC 1 cut(s) 537
Eco47I GGWCC 6 cut(s) 389, 770, 1018, 1601, 2034, 2081
Eco47III AGCGCT 1 cut(s) 1483
Eco53kI GAGCTC 1 cut(s) 105
Eco57I CTGAAG 1 cut(s) 1442
EcoICRI GAGCTC 1 cut(s) 105
EcoO109I RGGNCCY 2 cut(s) 1601, 2081
EcoRI GAATTC 1 cut(s) 426
EcoRII CCWGG 2 cut(s) 1776, 1905
EcoRV GATATC 1 cut(s) 537
EcoT14I CCWWGG 2 cut(s) 1414, 1608
EcoT38I GRGCYC 1 cut(s) 107
ErhI CCWWGG 2 cut(s) 1414, 1608
FalI AAGNNNNNCTT 2 cut(s) 1440, 1472
FaqI GGGAC 6 cut(s) 226, 1091, 1432, 1614, 2020, 2067
FauNDI CATATG 1 cut(s) 255
FblI GTMKAC 1 cut(s) 1748
Fnu4HI GCNGC 7 cut(s) 466, 1146, 1171, 1263, 1579, 1582, 1642
FokI GGATG 8 cut(s) 53, 135, 362, 1034, 1250, 1300, 1751, 1895
FriOI GRGCYC 1 cut(s) 107
Fsp4HI GCNGC 7 cut(s) 466, 1146, 1171, 1263, 1579, 1582, 1642
FspBI CTAG 2 cut(s) 1320, 1926
GlaI GCGC 2 cut(s) 1483, 1835
GluI GCNGC 7 cut(s) 466, 1146, 1171, 1263, 1579, 1582, 1642
GsaI CCCAGC 2 cut(s) 509, 1025
HaeII RGCGCY 1 cut(s) 1485
HaeIII GGCC 4 cut(s) 785, 1372, 1489, 1503
HapII CCGG 3 cut(s) 92, 206, 2032
HgaI GACGC 2 cut(s) 77, 749
HhaI GCGC 2 cut(s) 1484, 1836
Hin6I GCGC 2 cut(s) 1482, 1834
HinP1I GCGC 2 cut(s) 1482, 1834
HincII GTYRAC 2 cut(s) 155, 1132
HindII GTYRAC 2 cut(s) 155, 1132
HpaII CCGG 3 cut(s) 92, 206, 2032
HphI GGTGA 1 cut(s) 1578
Hpy166II GTNNAC 6 cut(s) 155, 290, 695, 889, 1132, 1749
Hpy188I TCNGA 9 cut(s) 399, 739, 1052, 1061, 1329, 1597, 1759, 1816, 1945
Hpy188III TCNNGA 7 cut(s) 145, 206, 431, 830, 949, 1070, 1303
Hpy8I GTNNAC 6 cut(s) 155, 290, 695, 889, 1132, 1749
HpyAV CCTTC 8 cut(s) 10, 61, 151, 433, 785, 875, 942, 2052
HpyCH4IV ACGT 4 cut(s) 180, 313, 997, 1791
HpyF10VI GCNNNNNNNGC 3 cut(s) 474, 998, 1154
HpyF3I CTNAG 9 cut(s) 240, 372, 409, 1422, 1548, 1860, 1919, 2039, 2103
HpySE526I ACGT 4 cut(s) 180, 313, 997, 1791
HspAI GCGC 2 cut(s) 1482, 1834
KflI GGGWCCC 1 cut(s) 2081
Kpn2I TCCGGA 1 cut(s) 205
Kzo9I GATC 9 cut(s) 271, 634, 765, 936, 1207, 1352, 1387, 1592, 1909
LmnI GCTCC 2 cut(s) 1612, 1831
Lsp1109I GCAGC 6 cut(s) 1132, 1157, 1274, 1565, 1593, 1653
LweI GCATC 4 cut(s) 113, 352, 1108, 1333
MaeI CTAG 2 cut(s) 1320, 1926
MaeII ACGT 4 cut(s) 180, 313, 997, 1791
MaeIII GTNAC 2 cut(s) 448, 1225
MalI GATC 9 cut(s) 273, 636, 767, 938, 1209, 1354, 1389, 1594, 1911
MboI GATC 9 cut(s) 271, 634, 765, 936, 1207, 1352, 1387, 1592, 1909
MflI RGATCY 3 cut(s) 634, 1352, 1909
MhlI GDGCHC 4 cut(s) 107, 1866, 2006, 2101
MlsI TGGCCA 1 cut(s) 785
MluI ACGCGT 1 cut(s) 86
MluNI TGGCCA 1 cut(s) 785
MlyI GAGTC 5 cut(s) 17, 80, 539, 1754, 1943
Mox20I TGGCCA 1 cut(s) 785
MroI TCCGGA 1 cut(s) 205
MroXI GAANNNNTTC 2 cut(s) 224, 885
MscI TGGCCA 1 cut(s) 785
MseI TTAA 7 cut(s) 893, 900, 1116, 1478, 1617, 1691, 1842
MslI CAYNNNNRTG 2 cut(s) 32, 530
Msp20I TGGCCA 1 cut(s) 785
MspA1I CMGCKG 1 cut(s) 686
MspCI CTTAAG 3 cut(s) 892, 1616, 1841
MspI CCGG 3 cut(s) 92, 206, 2032
MspR9I CCNGG 2 cut(s) 1778, 1907
Mva1269I GAATGC 1 cut(s) 2043
MvaI CCWGG 2 cut(s) 1778, 1907
MvnI CGCG 2 cut(s) 14, 88
MwoI GCNNNNNNNGC 3 cut(s) 474, 998, 1154
NcoI CCATGG 1 cut(s) 1414
NdeI CATATG 1 cut(s) 255
NdeII GATC 9 cut(s) 271, 634, 765, 936, 1207, 1352, 1387, 1592, 1909
NlaIV GGNNCC 8 cut(s) 469, 1020, 1253, 1602, 2036, 2082, 2083, 2098
NspI RCATGY 1 cut(s) 423
OliI CACNNNNGTG 1 cut(s) 530
PaeI GCATGC 1 cut(s) 423
PagI TCATGA 1 cut(s) 948
PcsI WCGNNNNNNNCGW 1 cut(s) 85
PctI GAATGC 1 cut(s) 2043
PdmI GAANNNNTTC 2 cut(s) 224, 885
PfeI GAWTC 8 cut(s) 443, 522, 550, 795, 866, 1379, 1453, 1661
Pfl23II CGTACG 1 cut(s) 314
PflMI CCANNNNNTGG 1 cut(s) 1906
PkrI GCNGC 7 cut(s) 467, 1147, 1172, 1264, 1580, 1583, 1643
Ple19I CGATCG 2 cut(s) 1390, 1595
PleI GAGTC 5 cut(s) 16, 79, 539, 1753, 1942
PpsI GAGTC 5 cut(s) 16, 79, 539, 1753, 1942
Ppu21I YACGTR 2 cut(s) 314, 998
PpuMI RGGWCCY 2 cut(s) 1601, 2081
Psp124BI GAGCTC 1 cut(s) 107
Psp5II RGGWCCY 2 cut(s) 1601, 2081
Psp6I CCWGG 2 cut(s) 1776, 1905
PspFI CCCAGC 2 cut(s) 505, 1021
PspGI CCWGG 2 cut(s) 1776, 1905
PspLI CGTACG 1 cut(s) 314
PspN4I GGNNCC 8 cut(s) 469, 1020, 1253, 1602, 2036, 2082, 2083, 2098
PspPI GGNCC 8 cut(s) 389, 770, 1018, 1488, 1502, 1601, 2034, 2081
PspPPI RGGWCCY 2 cut(s) 1601, 2081
PsrI GAACNNNNNNTAC 2 cut(s) 870, 902
PstI CTGCAG 1 cut(s) 1583
PstNI CAGNNNCTG 3 cut(s) 477, 743, 1906
PsuI RGATCY 3 cut(s) 634, 1352, 1909
PvuI CGATCG 2 cut(s) 1390, 1595
PvuII CAGCTG 1 cut(s) 686
RsaI GTAC 9 cut(s) 26, 291, 305, 316, 377, 456, 754, 996, 1046
RsaNI GTAC 9 cut(s) 25, 290, 304, 315, 376, 455, 753, 995, 1045
RseI CAYNNNNRTG 2 cut(s) 32, 530
SacI GAGCTC 1 cut(s) 107
SaqAI TTAA 7 cut(s) 893, 900, 1116, 1478, 1617, 1691, 1842
SatI GCNGC 7 cut(s) 466, 1146, 1171, 1263, 1579, 1582, 1642
Sau3AI GATC 9 cut(s) 271, 634, 765, 936, 1207, 1352, 1387, 1592, 1909
Sau96I GGNCC 8 cut(s) 389, 770, 1018, 1488, 1502, 1601, 2034, 2081
ScaI AGTACT 2 cut(s) 456, 754
SchI GAGTC 5 cut(s) 17, 80, 539, 1754, 1943
ScrFI CCNGG 2 cut(s) 1778, 1907
SduI GDGCHC 4 cut(s) 107, 1866, 2006, 2101
SfaNI GCATC 4 cut(s) 113, 352, 1108, 1333
SfcI CTRYAG 2 cut(s) 1356, 1579
SinI GGWCC 6 cut(s) 389, 770, 1018, 1601, 2034, 2081
SmiMI CAYNNNNRTG 2 cut(s) 32, 530
SmlI CTYRAG 3 cut(s) 892, 1616, 1841
SmoI CTYRAG 3 cut(s) 892, 1616, 1841
SphI GCATGC 1 cut(s) 423
SsiI CCGC 2 cut(s) 12, 465
SspMI CTAG 2 cut(s) 1320, 1926
SstI GAGCTC 1 cut(s) 107
StyD4I CCNGG 2 cut(s) 1776, 1905
StyI CCWWGG 2 cut(s) 1414, 1608
TaiI ACGT 4 cut(s) 183, 316, 1000, 1794
TaqI TCGA 7 cut(s) 79, 133, 430, 548, 749, 935, 1386
TaqII GACCGA 1 cut(s) 758
TatI WGTACW 6 cut(s) 24, 303, 375, 454, 752, 1044
TauI GCSGC 1 cut(s) 468
TfiI GAWTC 8 cut(s) 443, 522, 550, 795, 866, 1379, 1453, 1661
Tru1I TTAA 7 cut(s) 893, 900, 1116, 1478, 1617, 1691, 1842
Tru9I TTAA 7 cut(s) 893, 900, 1116, 1478, 1617, 1691, 1842
TscAI CASTG 6 cut(s) 478, 645, 1020, 1444, 1684, 1740
TseI GCWGC 6 cut(s) 1145, 1170, 1262, 1578, 1581, 1641
TspGWI ACGGA 3 cut(s) 451, 1166, 1844
TspRI CASTG 6 cut(s) 478, 645, 1020, 1444, 1684, 1740
Van91I CCANNNNNTGG 1 cut(s) 1906
Vha464I CTTAAG 3 cut(s) 892, 1616, 1841
VpaK11BI GGWCC 6 cut(s) 389, 770, 1018, 1601, 2034, 2081
XapI RAATTY 1 cut(s) 426
XceI RCATGY 1 cut(s) 423
XcmI CCANNNNNNNNNTGG 1 cut(s) 1882
XmiI GTMKAC 1 cut(s) 1748
XmnI GAANNNNTTC 2 cut(s) 224, 885
XspI CTAG 2 cut(s) 1320, 1926
ZrmI AGTACT 2 cut(s) 456, 754
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.