Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0006030

Physical Location & Seq

Genomic Coordinates Forward (+)

32653222 .. 32656775

Gene Structure 3554 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1241500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2103 bp

ATGTCGCATTCCGGGAAGCCCATTTCGGAGCAGCTCGGCCTAGACTCGCTTAACGATCGATTCCGTGACTCGCTGAGTTGCGAAGCCAACAAGCCCGATTTCCGAGAACTCGATTTAGGTTCGCCCGTTTCGCCTCTTCGGACTCGCCAGAGCGGCGGCATCGCCACTGCTACAAGCAGTAGTTCCAGCTCATCCGGATCGGTTTCCGGCCGAAATGGGCCCAACCCAGTTGCCAGACGGGCCGATTCAGCCCCCAACAACCACTCCGGCGAGCTCTCCGGCTCTAGCGAGAGCAGTCCCACAGCTGCAGATAGCGCCCGATCCGCTGGAAACACCCGCAGTTTCAAACCGGGTCATACAATGTGTTCCACCCACCCGCTTATATACTCGGGTCAGAGCTCCGTGAGCTCTCCGCCGCCCAGTGTTTTGCCCACGGGGAACATATGCCCATCTGGGAAATTCTTAAAAACGGGTATGGTCCCGAACCGGAGCTCCAGAACCGACGTTTTGGGTTCGGGTACGGGGAATTATGGTCATGGGAGCATAATGCGGGGCGGTCAGGCTGCTAAAGGCGGCGGCAGTGAGGCAGCGAGTTCCCTGAGTTCGAGGGCGAGCGCCGTGAGTTCGAGGGGTACCGGCTGCAGCGGAGACTTGTTGAAGAGAACAACGGCGAGTGTGGATCCAGAGGAGGTGAAGAGAGCTGGGAATGAGCAGTACAGAAGAGGCCATTTCGCAGAGGCTTTGAGCTTGTACGATCAGGCGATTGCATTGTCTCCGGCCAATGCCGCCTACCGGAGTAACCGGGCGGCAGCATTGACGGGTCTAGGACGGCTGACGGAGGCGGTGAGGGAATGTGAGGAGGCGGTGAGGTTGGATCCCAGTTATGGCAGAGCTCACCAGCGTTTGGGGTCTCTGTTTCTTAGTTGGTTAGGGCAGGTCGAGAATGCCCGGAGACACCTTTGTTTTCCCGGGCTGCAGCCAGATCCAGCTGAGTTACAGAAATTGCAGGCAGTAGAGAAGCATCTAAAAAGATGTACAGATTCCCGTCGTGTAGGAGATTGGAGAAGTGTATTGAGGGAATGCGATTCTACTATTGCTTCCGGAGCTGACTCTTCTCCTCAGCTCTCTATGTGTAGAGCGGAAGCGCTTCTGAAGCTCCACCAAATTGATGACGCTGAATCAGTCGTATTGAATACACCTAGATTAGACACTCATTCCGACCTTTCACAATCTAAGTTCTTTGGGATGCTTTCTGAAGCTTACACTAACTTTGTCTTGGCCCAAATTGAATTGGCATTTGGAAGGTTTGAGAATGCAGTTACTGCTGCTGAGAAAGCAGGACAGATTGATTCCCGAAACATTGAAGCTGCAGTGCTGCTAAGTAATGTGCGCTTGGTTATGAGAGCTCGTGCCCGTGGCAATGATCTCTTCAAGTCCGAAAGGTTCACAGAAGCTTGCGCAGCATATGGAGAAGGTCTGAGGCTTGATCCTTCAAACTCTGTTCTCTATTGCAACAGAGCGGCTTGTTGGTTTAAACTTGGGATGTGGGAGCGATCCATTGAAGACTGCAACCAGGCCCTATGTATTAAACATAATTACACAAAAGCCCTTCTCCGAAGGGCTGCCTCCAACAGCAAGCTAGAAAGATGGATAGAGGCTTTAAAAGATTATGAGGTCTTGAGAAGGTTGCTCCCTGATGACAATGAAGTTGCTGAATCTTTGTTTCATGCTCAAATTGCATTAAAAAAATCCCGTGAGGAAGAAGTTTCTAATTTGAAGTTTGGCGGTGAAGTGGAAGAAATATTAGGTCTTGAGCAGTTCAGAGCTGCGATATCTTTACCAGGTGTCTCCGTGGTCCATTTCAAAGCCGCCTCTGATTTGCAATGCAAGCAAATATCACCTTTTCTGGACACGCTTTGTGGTCGCTACCCATCCATAAATTTCCTCAAGGTTGACATTGAAGAAAACGCAGCAGTTGCAAACAGCGAAAATGTGAGGATTGTACCAACATTCAAGATTTACAAAAATGGGAGCCGAGTGAAGGAAATGGTGCGCCCCAGTCGCGATATGTTGGAACACTCGGTCAGGCATTATAGCTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0006950 GO:0006970 GO:0008150 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0010033 GO:0010646 GO:0010647 GO:0023051 GO:0023056 GO:0033993 GO:0042221 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0065007 GO:0097305 GO:1901419 GO:1901421 GO:1901700 GO:1905957 GO:1905959

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_1 TPR_11 TPR_16 TPR_19 TPR_2 TPR_8 Thioredoxin

Protein Analysis

701

Amino Acids

76.04

Weight (kDa)

8.67

Isoelectric Point (pI)

54.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_16	PF13432	234 - 294	2.7e-08	Tetratricopeptide repeat
TPR_11	PF13414	235 - 276	9.7e-06	TPR repeat
TPR_1	PF00515	502 - 533	9.6e-06	Tetratricopeptide repeat
Thioredoxin	PF00085	605 - 691	9.9e-13	Thioredoxin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006030)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53300
fragaria_vesca	FvH4_3g18510 FvH4_3g18510
malus_domestica	MD03G1241500.v1.1 MD11G1260800.v1.1 MD15G1393600.v1.1
prunus_persica	Prupe.4G167400_v2.0.a1 Prupe.4G167400_v2.0.a1 Prupe.4G167400_v2.0.a1
pyrus_communis	pycom03g18830 pycom11g23020
rosa_chinensis	RchiOBHm_Chr5g0031271
rosa_laevigata	RLG00000033297
rosa_multiflora	Rmu_co8169312.1_g000001 Rmu_sc0006236.1_g000002 Rmu_sc0010698.1_g000009 Rmu_sc0027117.1_g000001
rosa_roxburghii	Rroxscaffold_1G00049020
rosa_rugosa	Rorug05G0123400
rosa_samantha	Rh5AG216900 Rh5BG216400 Rh5BG505500 Rh5CG240100 Rh5CG529200 Rh5DG221600 Rh7DG001600
rosa_wichuraiana	Rw5G019840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1459
Acc36I	ACCTGC	1 cut(s)	925
Acc65I	GGTACC	1 cut(s)	632
AccB1I	GGYRCC	1 cut(s)	632
AccB7I	CCANNNNNTGG	1 cut(s)	904
AccBSI	CCGCTC	3 cut(s)	153, 1139, 1520
AccII	CGCG	1 cut(s)	2064
AccIII	TCCGGA	2 cut(s)	194, 1100
AclWI	GGATC	9 cut(s)	205, 315, 674, 687, 869, 882, 977, 1481, 1548
AcoI	YGGCCR	2 cut(s)	208, 777
AcsI	RAATTY	2 cut(s)	458, 1939
AcuI	CTGAAG	2 cut(s)	1172, 1275
AfaI	GTAC	6 cut(s)	520, 634, 716, 752, 1036, 2004
AfeI	AGCGCT	1 cut(s)	1146
AfiI	CCNNNNNNNGG	4 cut(s)	792, 884, 904, 2041
AjnI	CCWGG	2 cut(s)	1572, 1840
AjuI	GAANNNNNNNTTGG	2 cut(s)	1281, 1313
AloI	GAACNNNNNNTCC	2 cut(s)	476, 508
Alw21I	GWGCWC	6 cut(s)	276, 401, 410, 494, 895, 1408
Alw26I	GTCTC	5 cut(s)	642, 777, 915, 946, 1852
AlwI	GGATC	9 cut(s)	205, 315, 674, 687, 869, 882, 977, 1481, 1548
AlwNI	CAGNNNCTG	1 cut(s)	1322
Ama87I	CYCGRG	2 cut(s)	388, 968
Aor13HI	TCCGGA	2 cut(s)	194, 1100
Aor51HI	AGCGCT	1 cut(s)	1146
AoxI	GGCC	8 cut(s)	37, 208, 218, 240, 724, 777, 1278, 1575
ApaI	GGGCCC	1 cut(s)	222
ApoI	RAATTY	2 cut(s)	458, 1939
Asp700I	GAANNNNTTC	1 cut(s)	1146
Asp718I	GGTACC	1 cut(s)	632
AspLEI	GCGC	6 cut(s)	317, 617, 1147, 1392, 1460, 2055
AspS9I	GGNCC	7 cut(s)	218, 219, 240, 478, 1279, 1576, 1855
AsuC2I	CCSGG	6 cut(s)	13, 351, 803, 949, 969, 970
AsuHPI	GGTGA	6 cut(s)	703, 856, 877, 887, 1799, 1890
AvaI	CYCGRG	2 cut(s)	388, 968
AvaII	GGWCC	2 cut(s)	478, 1855
BaeGI	GKGCMC	2 cut(s)	222, 1414
BamHI	GGATCC	2 cut(s)	679, 874
BanI	GGYRCC	1 cut(s)	632
BanII	GRGCYC	7 cut(s)	222, 276, 401, 410, 494, 895, 1408
BauI	CACGAG	1 cut(s)	1407
BbsI	GAAGAC	1 cut(s)	1569
Bbv12I	GWGCWC	6 cut(s)	276, 401, 410, 494, 895, 1408
BbvCI	CCTCAGC	1 cut(s)	1119
BccI	CCATC	3 cut(s)	457, 1641, 1939
BceAI	ACGGC	3 cut(s)	602, 684, 845
BciT130I	CCWGG	2 cut(s)	1574, 1842
BcnI	CCSGG	6 cut(s)	13, 351, 803, 949, 969, 970
BcoDI	GTCTC	5 cut(s)	642, 777, 915, 946, 1852
BfaI	CTAG	5 cut(s)	41, 285, 824, 1200, 1640
BfmI	CTRYAG	4 cut(s)	306, 640, 974, 1368
BfoI	RGCGCY	3 cut(s)	318, 618, 1148
BfuAI	ACCTGC	1 cut(s)	925
BglI	GCCNNNNNGGC	2 cut(s)	153, 239
Bme1390I	CCNGG	8 cut(s)	13, 351, 803, 949, 969, 970, 1574, 1842
Bme18I	GGWCC	2 cut(s)	478, 1855
BmeT110I	CYCGRG	2 cut(s)	388, 968
BmgT120I	GGNCC	7 cut(s)	218, 219, 240, 478, 1279, 1576, 1855
BmiI	GGNNCC	6 cut(s)	220, 480, 634, 681, 876, 2033
BmrFI	CCNGG	8 cut(s)	13, 351, 803, 949, 969, 970, 1574, 1842
BmrI	ACTGGG	4 cut(s)	221, 414, 873, 2052
BmsI	GCATC	3 cut(s)	168, 1030, 1236
BmuI	ACTGGG	4 cut(s)	221, 414, 873, 2052
BpiI	GAAGAC	1 cut(s)	1569
BpmI	CTGGAG	1 cut(s)	478
Bpu10I	CCTNAGC	1 cut(s)	1119
BpuEI	CTTGAG	3 cut(s)	1699, 1832, 1931
BpuMI	CCSGG	6 cut(s)	13, 351, 803, 949, 969, 970
Bsa29I	ATCGAT	1 cut(s)	58
BsaI	GGTCTC	1 cut(s)	915
BsaJI	CCNNGG	4 cut(s)	432, 968, 1414, 1851
BsaWI	WCCGGW	4 cut(s)	194, 486, 792, 1100
BsaXI	ACNNNNNCTCC	4 cut(s)	248, 278, 476, 506
Bsc4I	CCNNNNNNNGG	4 cut(s)	792, 884, 904, 2041
Bse118I	RCCGGY	1 cut(s)	635
Bse1I	ACTGG	4 cut(s)	227, 420, 879, 2058
Bse3DI	GCAATG	2 cut(s)	1426, 1889
BseAI	TCCGGA	2 cut(s)	194, 1100
BseBI	CCWGG	2 cut(s)	1574, 1842
BseCI	ATCGAT	1 cut(s)	58
BseDI	CCNNGG	4 cut(s)	432, 968, 1414, 1851
BseGI	GGATG	4 cut(s)	191, 1251, 1548, 1931
BseLI	CCNNNNNNNGG	4 cut(s)	792, 884, 904, 2041
BseMI	GCAATG	2 cut(s)	1426, 1889
BseMII	CTCAG	6 cut(s)	65, 590, 981, 1133, 1320, 1469
BseNI	ACTGG	4 cut(s)	227, 420, 879, 2058
BseRI	GAGGAG	3 cut(s)	701, 872, 1107
BseSI	GKGCMC	2 cut(s)	222, 1414
BseX3I	CGGCCG	1 cut(s)	208
BseYI	CCCAGC	1 cut(s)	701
Bsh1236I	CGCG	1 cut(s)	2064
Bsh1285I	CGRYCG	2 cut(s)	58, 211
BshFI	GGCC	8 cut(s)	39, 210, 220, 242, 726, 779, 1280, 1577
BshNI	GGYRCC	1 cut(s)	632
BshVI	ATCGAT	1 cut(s)	58
BsiEI	CGRYCG	2 cut(s)	58, 211
BsiHKAI	GWGCWC	6 cut(s)	276, 401, 410, 494, 895, 1408
BsiHKCI	CYCGRG	2 cut(s)	388, 968
BslFI	GGGAC	2 cut(s)	282, 464
BslI	CCNNNNNNNGG	4 cut(s)	792, 884, 904, 2041
BsmAI	GTCTC	5 cut(s)	642, 777, 915, 946, 1852
BsmFI	GGGAC	2 cut(s)	282, 464
BsmI	GAATGC	4 cut(s)	7, 949, 1085, 1318
BsnI	GGCC	8 cut(s)	39, 210, 220, 242, 726, 779, 1280, 1577
Bso31I	GGTCTC	1 cut(s)	915
BsoBI	CYCGRG	2 cut(s)	388, 968
Bsp120I	GGGCCC	1 cut(s)	218
Bsp1286I	GDGCHC	8 cut(s)	222, 276, 401, 410, 494, 895, 1408, 1414
Bsp13I	TCCGGA	2 cut(s)	194, 1100
Bsp1407I	TGTACA	1 cut(s)	1034
Bsp68I	TCGCGA	1 cut(s)	2064
BspANI	GGCC	8 cut(s)	39, 210, 220, 242, 726, 779, 1280, 1577
BspCNI	CTCAG	6 cut(s)	66, 591, 982, 1132, 1321, 1470
BspDI	ATCGAT	1 cut(s)	58
BspEI	TCCGGA	2 cut(s)	194, 1100
BspFNI	CGCG	1 cut(s)	2064
BspLI	GGNNCC	6 cut(s)	220, 480, 634, 681, 876, 2033
BspMAI	CTGCAG	4 cut(s)	310, 644, 978, 1372
BspMI	ACCTGC	1 cut(s)	925
BspPI	GGATC	9 cut(s)	205, 315, 674, 687, 869, 882, 977, 1481, 1548
BspT107I	GGYRCC	1 cut(s)	632
BspTNI	GGTCTC	1 cut(s)	915
BsrBI	CCGCTC	3 cut(s)	153, 1139, 1520
BsrDI	GCAATG	2 cut(s)	1426, 1889
BsrFI	RCCGGY	1 cut(s)	635
BsrGI	TGTACA	1 cut(s)	1034
BsrI	ACTGG	4 cut(s)	227, 420, 879, 2058
BssAI	RCCGGY	1 cut(s)	635
BssECI	CCNNGG	4 cut(s)	432, 968, 1414, 1851
BssSI	CACGAG	1 cut(s)	1407
Bst2BI	CACGAG	1 cut(s)	1407
Bst2UI	CCWGG	2 cut(s)	1574, 1842
Bst6I	CTCTTC	6 cut(s)	141, 653, 689, 715, 1117, 1433
BstAPI	GCANNNNNTGC	2 cut(s)	1322, 1976
BstAUI	TGTACA	1 cut(s)	1034
BstC8I	GCNNGC	6 cut(s)	272, 613, 1008, 1456, 1637, 1889
BstDEI	CTNAG	9 cut(s)	74, 599, 920, 990, 1119, 1233, 1329, 1379, 1478
BstDSI	CCRYGG	3 cut(s)	432, 1414, 1851
BstF5I	GGATG	4 cut(s)	191, 1251, 1548, 1931
BstFNI	CGCG	1 cut(s)	2064
BstH2I	RGCGCY	3 cut(s)	318, 618, 1148
BstHHI	GCGC	6 cut(s)	317, 617, 1147, 1392, 1460, 2055
BstMAI	GTCTC	5 cut(s)	642, 777, 915, 946, 1852
BstMCI	CGRYCG	2 cut(s)	58, 211
BstNI	CCWGG	2 cut(s)	1574, 1842
BstSCI	CCNGG	8 cut(s)	11, 349, 801, 947, 967, 968, 1572, 1840
BstSFI	CTRYAG	4 cut(s)	306, 640, 974, 1368
BstSLI	GKGCMC	2 cut(s)	222, 1414
BstUI	CGCG	1 cut(s)	2064
BstV2I	GAAGAC	1 cut(s)	1569
BstX2I	RGATCY	3 cut(s)	679, 874, 982
BstYI	RGATCY	3 cut(s)	679, 874, 982
BstZI	CGGCCG	1 cut(s)	208
Bsu15I	ATCGAT	1 cut(s)	58
BsuRI	GGCC	8 cut(s)	39, 210, 220, 242, 726, 779, 1280, 1577
BsuTUI	ATCGAT	1 cut(s)	58
BtgI	CCRYGG	3 cut(s)	432, 1414, 1851
BtgZI	GCGATG	1 cut(s)	145
BtsCI	GGATG	4 cut(s)	191, 1251, 1548, 1931
BtsI	GCAGTG	3 cut(s)	165, 586, 1377
BtsIMutI	CAGTG	4 cut(s)	165, 427, 586, 1377
BtuMI	TCGCGA	1 cut(s)	2064
BveI	ACCTGC	1 cut(s)	925
Cac8I	GCNNGC	6 cut(s)	272, 613, 1008, 1456, 1637, 1889
CaiI	CAGNNNCTG	1 cut(s)	1322
CfoI	GCGC	6 cut(s)	317, 617, 1147, 1392, 1460, 2055
Cfr10I	RCCGGY	1 cut(s)	635
Cfr13I	GGNCC	7 cut(s)	218, 219, 240, 478, 1279, 1576, 1855
Cfr9I	CCCGGG	1 cut(s)	968
ClaI	ATCGAT	1 cut(s)	58
CseI	GACGC	1 cut(s)	1181
CsiI	ACCWGGT	1 cut(s)	1840
Csp6I	GTAC	6 cut(s)	519, 633, 715, 751, 1035, 2003
CviAII	CATG	2 cut(s)	536, 1727
CviQI	GTAC	6 cut(s)	519, 633, 715, 751, 1035, 2003
DdeI	CTNAG	9 cut(s)	74, 599, 920, 990, 1119, 1233, 1329, 1379, 1478
DraI	TTTAAA	2 cut(s)	1534, 1662
EaeI	YGGCCR	2 cut(s)	208, 777
EagI	CGGCCG	1 cut(s)	208
Eam1104I	CTCTTC	6 cut(s)	141, 653, 689, 715, 1117, 1433
EarI	CTCTTC	6 cut(s)	141, 653, 689, 715, 1117, 1433
EciI	GGCGGA	1 cut(s)	402
Ecl136II	GAGCTC	6 cut(s)	274, 399, 408, 492, 893, 1406
EclXI	CGGCCG	1 cut(s)	208
Eco24I	GRGCYC	7 cut(s)	222, 276, 401, 410, 494, 895, 1408
Eco31I	GGTCTC	1 cut(s)	915
Eco32I	GATATC	1 cut(s)	1833
Eco47I	GGWCC	2 cut(s)	478, 1855
Eco47III	AGCGCT	1 cut(s)	1146
Eco52I	CGGCCG	1 cut(s)	208
Eco53kI	GAGCTC	6 cut(s)	274, 399, 408, 492, 893, 1406
Eco57I	CTGAAG	2 cut(s)	1172, 1275
Eco88I	CYCGRG	2 cut(s)	388, 968
EcoICRI	GAGCTC	6 cut(s)	274, 399, 408, 492, 893, 1406
EcoO109I	RGGNCCY	1 cut(s)	1576
EcoRII	CCWGG	2 cut(s)	1572, 1840
EcoRV	GATATC	1 cut(s)	1833
EcoT38I	GRGCYC	7 cut(s)	222, 276, 401, 410, 494, 895, 1408
FaeI	CATG	2 cut(s)	539, 1730
FaqI	GGGAC	2 cut(s)	282, 464
FatI	CATG	2 cut(s)	535, 1726
FauI	CCCGC	3 cut(s)	344, 384, 543
FauNDI	CATATG	2 cut(s)	443, 1465
FokI	GGATG	4 cut(s)	178, 1258, 1555, 1918
FriOI	GRGCYC	7 cut(s)	222, 276, 401, 410, 494, 895, 1408
FspBI	CTAG	5 cut(s)	41, 285, 824, 1200, 1640
FspI	TGCGCA	1 cut(s)	1459
GlaI	GCGC	6 cut(s)	316, 616, 1146, 1391, 1459, 2054
GsaI	CCCAGC	1 cut(s)	705
GsuI	CTGGAG	1 cut(s)	478
HaeII	RGCGCY	3 cut(s)	318, 618, 1148
HaeIII	GGCC	8 cut(s)	39, 210, 220, 242, 726, 779, 1280, 1577
HgaI	GACGC	1 cut(s)	1181
HhaI	GCGC	6 cut(s)	317, 617, 1147, 1392, 1460, 2055
Hin1II	CATG	2 cut(s)	539, 1730
Hin6I	GCGC	6 cut(s)	315, 615, 1145, 1390, 1458, 2053
HinP1I	GCGC	6 cut(s)	315, 615, 1145, 1390, 1458, 2053
HincII	GTYRAC	1 cut(s)	1954
HindII	GTYRAC	1 cut(s)	1954
HindIII	AAGCTT	2 cut(s)	1257, 1452
HphI	GGTGA	6 cut(s)	703, 856, 877, 887, 1799, 1890
Hpy166II	GTNNAC	2 cut(s)	1446, 1954
Hpy8I	GTNNAC	2 cut(s)	1446, 1954
Hpy99I	CGWCG	2 cut(s)	506, 1050
HpyAV	CCTTC	7 cut(s)	1296, 1466, 1500, 1611, 1619, 1677, 2035
HpyCH4IV	ACGT	1 cut(s)	504
HpyF3I	CTNAG	9 cut(s)	74, 599, 920, 990, 1119, 1233, 1329, 1379, 1478
HpySE526I	ACGT	1 cut(s)	504
Hsp92II	CATG	2 cut(s)	539, 1730
HspAI	GCGC	6 cut(s)	315, 615, 1145, 1390, 1458, 2053
Kpn2I	TCCGGA	2 cut(s)	194, 1100
KpnI	GGTACC	1 cut(s)	636
LweI	GCATC	3 cut(s)	168, 1030, 1236
MabI	ACCWGGT	1 cut(s)	1840
MaeI	CTAG	5 cut(s)	41, 285, 824, 1200, 1640
MaeII	ACGT	1 cut(s)	504
MaeIII	GTNAC	4 cut(s)	65, 797, 993, 1318
MbiI	CCGCTC	3 cut(s)	153, 1139, 1520
MflI	RGATCY	3 cut(s)	679, 874, 982
MhlI	GDGCHC	8 cut(s)	222, 276, 401, 410, 494, 895, 1408, 1414
MlyI	GAGTC	4 cut(s)	38, 62, 136, 1103
MmeI	TCCRAC	4 cut(s)	852, 1242, 1653, 2052
MroI	TCCGGA	2 cut(s)	194, 1100
MroXI	GAANNNNTTC	1 cut(s)	1146
MseI	TTAA	6 cut(s)	51, 464, 1533, 1587, 1661, 1742
MspA1I	CMGCKG	4 cut(s)	305, 326, 645, 989
MspR9I	CCNGG	8 cut(s)	13, 351, 803, 949, 969, 970, 1574, 1842
MssI	GTTTAAAC	1 cut(s)	1534
Mva1269I	GAATGC	4 cut(s)	7, 949, 1085, 1318
MvaI	CCWGG	2 cut(s)	1574, 1842
MvnI	CGCG	1 cut(s)	2064
NciI	CCSGG	6 cut(s)	13, 351, 803, 949, 969, 970
NdeI	CATATG	2 cut(s)	443, 1465
NlaIII	CATG	2 cut(s)	539, 1730
NlaIV	GGNNCC	6 cut(s)	220, 480, 634, 681, 876, 2033
NmeAIII	GCCGAG	2 cut(s)	15, 2060
NmuCI	GTSAC	1 cut(s)	65
NruI	TCGCGA	1 cut(s)	2064
NsbI	TGCGCA	1 cut(s)	1459
PctI	GAATGC	4 cut(s)	7, 949, 1085, 1318
PdmI	GAANNNNTTC	1 cut(s)	1146
PfeI	GAWTC	7 cut(s)	60, 245, 1040, 1085, 1178, 1349, 1715
PflMI	CCANNNNNTGG	1 cut(s)	904
PfoI	TCCNGGA	1 cut(s)	11
Ple19I	CGATCG	1 cut(s)	58
PleI	GAGTC	4 cut(s)	38, 62, 136, 1103
PmeI	GTTTAAAC	1 cut(s)	1534
PpsI	GAGTC	4 cut(s)	38, 62, 136, 1103
Psp124BI	GAGCTC	6 cut(s)	276, 401, 410, 494, 895, 1408
Psp6I	CCWGG	2 cut(s)	1572, 1840
PspFI	CCCAGC	1 cut(s)	701
PspGI	CCWGG	2 cut(s)	1572, 1840
PspN4I	GGNNCC	6 cut(s)	220, 480, 634, 681, 876, 2033
PspOMI	GGGCCC	1 cut(s)	218
PspPI	GGNCC	7 cut(s)	218, 219, 240, 478, 1279, 1576, 1855
PstI	CTGCAG	4 cut(s)	310, 644, 978, 1372
PstNI	CAGNNNCTG	1 cut(s)	1322
PsuI	RGATCY	3 cut(s)	679, 874, 982
PvuI	CGATCG	1 cut(s)	58
PvuII	CAGCTG	2 cut(s)	305, 989
RruI	TCGCGA	1 cut(s)	2064
RsaI	GTAC	6 cut(s)	520, 634, 716, 752, 1036, 2004
RsaNI	GTAC	6 cut(s)	519, 633, 715, 751, 1035, 2003
SacI	GAGCTC	6 cut(s)	276, 401, 410, 494, 895, 1408
SaqAI	TTAA	6 cut(s)	51, 464, 1533, 1587, 1661, 1742
Sau96I	GGNCC	7 cut(s)	218, 219, 240, 478, 1279, 1576, 1855
SchI	GAGTC	4 cut(s)	38, 62, 136, 1103
ScrFI	CCNGG	8 cut(s)	13, 351, 803, 949, 969, 970, 1574, 1842
SduI	GDGCHC	8 cut(s)	222, 276, 401, 410, 494, 895, 1408, 1414
SexAI	ACCWGGT	1 cut(s)	1840
SfaNI	GCATC	3 cut(s)	168, 1030, 1236
SfcI	CTRYAG	4 cut(s)	306, 640, 974, 1368
SinI	GGWCC	2 cut(s)	478, 1855
SmaI	CCCGGG	1 cut(s)	970
SmlI	CTYRAG	3 cut(s)	1678, 1811, 1946
SmoI	CTYRAG	3 cut(s)	1678, 1811, 1946
SspI	AATATT	1 cut(s)	1803
SspMI	CTAG	5 cut(s)	41, 285, 824, 1200, 1640
SstI	GAGCTC	6 cut(s)	276, 401, 410, 494, 895, 1408
StyD4I	CCNGG	8 cut(s)	11, 349, 801, 947, 967, 968, 1572, 1840
TaiI	ACGT	1 cut(s)	507
TaqI	TCGA	5 cut(s)	58, 111, 605, 626, 939
TaqII	GACCGA	1 cut(s)	2071
TatI	WGTACW	2 cut(s)	714, 1034
TauI	GCSGC	9 cut(s)	156, 159, 418, 576, 579, 788, 809, 1523, 1871
TfiI	GAWTC	7 cut(s)	60, 245, 1040, 1085, 1178, 1349, 1715
Tru1I	TTAA	6 cut(s)	51, 464, 1533, 1587, 1661, 1742
Tru9I	TTAA	6 cut(s)	51, 464, 1533, 1587, 1661, 1742
TscAI	CASTG	4 cut(s)	172, 427, 586, 1377
TseFI	GTSAC	1 cut(s)	65
Tsp45I	GTSAC	1 cut(s)	65
TspDTI	ATGAA	2 cut(s)	1715, 1719
TspGWI	ACGGA	4 cut(s)	53, 391, 851, 1840
TspMI	CCCGGG	1 cut(s)	968
TspRI	CASTG	4 cut(s)	172, 427, 586, 1377
Van91I	CCANNNNNTGG	1 cut(s)	904
VpaK11BI	GGWCC	2 cut(s)	478, 1855
XapI	RAATTY	2 cut(s)	458, 1939
XmaI	CCCGGG	1 cut(s)	968
XmnI	GAANNNNTTC	1 cut(s)	1146
XspI	CTAG	5 cut(s)	41, 285, 824, 1200, 1640

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.