Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0006030

Physical Location & Seq

Genomic Coordinates Reverse (-)

25555105 .. 25558062

Gene Structure 2958 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG216900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2085 bp

ATGTCGCACGCCGGGAAGCCCATTTCGGAGCCAGGCGTCGACTCCTCGCTCTCCGATCGCTTCCGTGACTCACTGAGTTGCGAGGCCAACAAGCCCGACTTCCGAGAACTCGATCTGGGCTCGCCCGTTTCGCCGCTGCGGACTCGCCAGAGCGGTGGGCTCGCCACTGCCACCAGCAGCAGCTCCAGTTCGTCCGGATCGGTGTCGGGTCGGAATGGAACCAACCCGGTTAATGCGAGGAGGTCCGGTTCGGGGCCCAACAACAACCACTCCGGCGAGCTCTCCGGCTCCAGCGAGAGCAGTCCCACAAATACCCGGAATAGCTCCAAACCGGGTCACACGAGATCCAATTCCGGCTCCGCCCACCCGTTAATTTACTCGGGTCAGAGCTCCTCCGCCGTGAACTCGTCGCCGAGATCGAATGTTCTGCCCACCGGGAACATATGCCCATCCGGGAAAATCCTCAAGGCGGGTATGGTTCCGAATCGGACCTCCAGAACCGACGTTTTGGGCTCCGGGACGGGCTATTACGGCCACGGGAGCATAATGCGGGGCGGCGCGGCGGCCAAGAGTGTCGGCGCCACCGAGGCGGTGAGCTCCAGAACAAGTGGCGGCGGCGGCGGCGGCGGAGGAGAGTTGGGGAAGAGAGGAATGGGGAGTGTGGATCCGGAAGAGGTGAAGAGAGCTGGGAATGAGCACTACAGGAGAGGCAATTTTGCAGAGGCTTTGAGCTTGTATGATCGGGCAATTGCTTTGGCTCCGGCCAATGCGGCTTACCGGAGCAACCGGGCTGCGGCATTGACCGGTCTAGGGCGGCTGGGGGAGGCGGTGAGGGAGTGTGAGGAGGCTGTGAAGTTGGATCCCAATTATGGCAGAGCTCACCACCGTTTGGGTTCTTTGTTTCTTAGGTTAGGGCAGGTGGAGAATGCCAGGAGGCATCTTTGTCTTCCAGGGCTGCAGCCGGATGCGGCTGAGTTACGGAAATTAGAGGTAGTAGAGAAGCATCTTAAAAAATGTACAGATGCACGTCGTGTAGGAGATTGGAAAAGTGTATTGAGGGAAAATGACTCTGCTATTGCTGCTGGAGCTGACTTTTCTCCCCAGCTCTCTATGTGTAGAGCGGAAGCACATTTGAAGCTCCACCAAATTGATGATGCTGAATCAGTCCTATCAAATATACCCAAATTTGACACATATACCAACTCCTCACAATCTAAGTTCTTTGGGATGCTTTCTGAAGCATATACTTACTTTGTCTTGGCCCAAATTGAGATGGCATTTGGAAGGTTTGAGAATGCAGTTACTTCTGCTGAGAAAGCTGGAAAGATTGATCCCCGAAACCTAGAAGTTGCGTCGCTGCTTCAAAATGTGCGAATGGTGGTGAGAGCTCGTGCCCGTGGCAATGATCTCTTCAAGTCTGAAAGGTTCACTGAAGCGTGCTTAGCTTATGGTGATGGTCTGAGGCTTGATCCTTCAAACTCTGTTCTATATTGCAACAGAGCAGCTTGCTGGTTTAAGCTTGGGATGTGGGAGCATTCCATTGAAGACTGCAACCAGGCCCTATGTATTAAACCGAATTACACAAAAGCTCTCCTTCGAAGGGCTGCATCAAACAGCAAGCTAGAAAGATGGGTCGATGCTGTTAGAGACTATGAGGTCTTGAGGAGGGAGCTTCCTGATGACAATGAAGTTGCTGAATCATTGTTTCATGCTCAAGTTGCATTGAAAAAGTCTCGTGGGGAAGAAGTGCATGATATGAAGTTTGGGGGTGAAGTAGAAGAAATATTGGGTCTTGAGCGGTTCAGAGCTGCAATATGTTTACCAGGTGTCTCCGTGGTCCATTTCAAAGCAGCATCTAATTTGCAATGCAAGCAAATGTCACCTTTCATGGACACACTCTGTGGCCGCTACCCATCCATAAATTTCCTCAAGGTTGACATTGAAGACAGCCCAGCAGTTGCGAACATTGAAAATGTGAAGATTGTACCTACATTCAAGATATACAAAAACGGTAGCCGAGTGAAGGAAATGGTGTGCCCCTGTCGCGAAATGTTAGAACACTCGGTCAGGCATTATAGCTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0006950 GO:0006970 GO:0008150 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0010033 GO:0010646 GO:0010647 GO:0023051 GO:0023056 GO:0033993 GO:0042221 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0065007 GO:0097305 GO:1901419 GO:1901421 GO:1901700 GO:1905957 GO:1905959

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_1 TPR_11 TPR_16 TPR_19 TPR_2 TPR_8 Thioredoxin

Protein Analysis

694

Amino Acids

75.21

Weight (kDa)

8.96

Isoelectric Point (pI)

48.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_16	PF13432	229 - 289	8.3e-08	Tetratricopeptide repeat
TPR_11	PF13414	230 - 271	7.5e-06	TPR repeat
TPR_1	PF00515	496 - 527	1.2e-06	Tetratricopeptide repeat
Thioredoxin	PF00085	609 - 680	4.1e-11	Thioredoxin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006030)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53300
fragaria_vesca	FvH4_3g18510 FvH4_3g18510
malus_domestica	MD03G1241500.v1.1 MD11G1260800.v1.1 MD15G1393600.v1.1
prunus_persica	Prupe.4G167400_v2.0.a1 Prupe.4G167400_v2.0.a1 Prupe.4G167400_v2.0.a1
pyrus_communis	pycom03g18830 pycom11g23020
rosa_chinensis	RchiOBHm_Chr5g0031271
rosa_laevigata	RLG00000033297
rosa_multiflora	Rmu_co8169312.1_g000001 Rmu_sc0006236.1_g000002 Rmu_sc0010698.1_g000009 Rmu_sc0027117.1_g000001
rosa_roxburghii	Rroxscaffold_1G00049020
rosa_rugosa	Rorug05G0123400
rosa_samantha	Rh5AG216900 Rh5BG216400 Rh5BG505500 Rh5CG240100 Rh5CG529200 Rh5DG221600 Rh7DG001600
rosa_wichuraiana	Rw5G019840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	907
AasI	GACNNNNNNGTC	1 cut(s)	1655
Acc36I	ACCTGC	1 cut(s)	907
AccB1I	GGYRCC	1 cut(s)	578
AccB7I	CCANNNNNTGG	1 cut(s)	889
AccBSI	CCGCTC	3 cut(s)	153, 1121, 1798
AccI	GTMKAC	1 cut(s)	39
AccII	CGCG	2 cut(s)	560, 2046
AccIII	TCCGGA	2 cut(s)	194, 667
AclWI	GGATC	8 cut(s)	205, 339, 659, 672, 854, 867, 1325, 1463
AcoI	YGGCCR	4 cut(s)	532, 564, 762, 1903
AcsI	RAATTY	2 cut(s)	1184, 1921
AcuI	CTGAAG	2 cut(s)	1257, 1452
AcyI	GRCGYC	2 cut(s)	36, 579
AdeI	CACNNNGTG	2 cut(s)	1031, 1901
AfaI	GTAC	2 cut(s)	1018, 1986
AfiI	CCNNNNNNNGG	8 cut(s)	252, 469, 793, 810, 869, 889, 1600, 2023
AgeI	ACCGGT	1 cut(s)	803
AjiI	CACGTC	1 cut(s)	1028
AjnI	CCWGG	5 cut(s)	31, 929, 949, 1554, 1822
AloI	GAACNNNNNNTCC	2 cut(s)	232, 264
Alw21I	GWGCWC	6 cut(s)	282, 392, 599, 699, 880, 1390
Alw26I	GTCTC	3 cut(s)	1641, 1737, 1834
AlwI	GGATC	8 cut(s)	205, 339, 659, 672, 854, 867, 1325, 1463
Ama87I	CYCGRG	1 cut(s)	379
Aor13HI	TCCGGA	2 cut(s)	194, 667
AoxI	GGCC	8 cut(s)	84, 254, 532, 564, 762, 1260, 1557, 1903
ApaI	GGGCCC	1 cut(s)	258
ApoI	RAATTY	2 cut(s)	1184, 1921
AsiGI	ACCGGT	1 cut(s)	803
AspLEI	GCGC	2 cut(s)	560, 581
AspS9I	GGNCC	7 cut(s)	243, 254, 255, 489, 1261, 1558, 1837
AsuC2I	CCSGG	8 cut(s)	13, 227, 316, 333, 436, 454, 517, 788
AsuHPI	GGTGA	8 cut(s)	604, 688, 841, 872, 1393, 1463, 1781, 1872
AsuII	TTCGAA	1 cut(s)	1597
AvaI	CYCGRG	1 cut(s)	379
AvaII	GGWCC	3 cut(s)	243, 489, 1837
BaeGI	GKGCMC	3 cut(s)	258, 1396, 2039
BamHI	GGATCC	2 cut(s)	664, 859
BanI	GGYRCC	1 cut(s)	578
BanII	GRGCYC	9 cut(s)	122, 162, 258, 282, 392, 515, 599, 880, 1390
BauI	CACGAG	3 cut(s)	340, 1389, 1734
BbsI	GAAGAC	3 cut(s)	938, 1551, 1950
Bbv12I	GWGCWC	6 cut(s)	282, 392, 599, 699, 880, 1390
BccI	CCATC	5 cut(s)	457, 1267, 1448, 1623, 1921
BceAI	ACGGC	2 cut(s)	383, 547
BcgI	CGANNNNNNTGC	2 cut(s)	409, 443
BciT130I	CCWGG	5 cut(s)	33, 931, 951, 1556, 1824
BcnI	CCSGG	8 cut(s)	13, 227, 316, 333, 436, 454, 517, 788
BcoDI	GTCTC	3 cut(s)	1641, 1737, 1834
BfaI	CTAG	3 cut(s)	809, 1343, 1622
BfmI	CTRYAG	2 cut(s)	700, 956
BfoI	RGCGCY	1 cut(s)	582
BfuAI	ACCTGC	1 cut(s)	907
BglI	GCCNNNNNGGC	2 cut(s)	587, 770
BlpI	GCTNAGC	1 cut(s)	1441
Bme18I	GGWCC	3 cut(s)	243, 489, 1837
BmeT110I	CYCGRG	1 cut(s)	379
BmgBI	CACGTC	1 cut(s)	1028
BmgT120I	GGNCC	7 cut(s)	243, 254, 255, 489, 1261, 1558, 1837
BmsI	GCATC	9 cut(s)	946, 955, 1012, 1012, 1144, 1218, 1616, 1627, 1862
BpiI	GAAGAC	3 cut(s)	938, 1551, 1950
BpmI	CTGGAG	5 cut(s)	169, 274, 478, 583, 1104
Bpu1102I	GCTNAGC	1 cut(s)	1441
Bpu14I	TTCGAA	1 cut(s)	1597
BpuEI	CTTGAG	5 cut(s)	449, 1681, 1698, 1814, 1913
BpuMI	CCSGG	8 cut(s)	13, 227, 316, 333, 436, 454, 517, 788
BsaHI	GRCGYC	2 cut(s)	36, 579
BsaJI	CCNNGG	5 cut(s)	535, 585, 950, 1396, 1833
BsaWI	WCCGGW	5 cut(s)	194, 245, 667, 777, 803
BsaXI	ACNNNNNCTCC	4 cut(s)	232, 254, 262, 284
Bsc4I	CCNNNNNNNGG	8 cut(s)	252, 469, 793, 810, 869, 889, 1600, 2023
Bse118I	RCCGGY	1 cut(s)	803
Bse1I	ACTGG	1 cut(s)	186
Bse3DI	GCAATG	2 cut(s)	1408, 1871
BseAI	TCCGGA	2 cut(s)	194, 667
BseBI	CCWGG	5 cut(s)	33, 931, 951, 1556, 1824
BseDI	CCNNGG	5 cut(s)	535, 585, 950, 1396, 1833
BseGI	GGATG	5 cut(s)	449, 970, 1233, 1530, 1913
BseLI	CCNNNNNNNGG	8 cut(s)	252, 469, 793, 810, 869, 889, 1600, 2023
BseMI	GCAATG	2 cut(s)	1408, 1871
BseMII	CTCAG	4 cut(s)	65, 963, 1302, 1451
BseNI	ACTGG	1 cut(s)	186
BseRI	GAGGAG	7 cut(s)	34, 253, 382, 645, 857, 1195, 1678
BseSI	GKGCMC	3 cut(s)	258, 1396, 2039
BseYI	CCCAGC	4 cut(s)	686, 817, 1101, 1951
Bsh1236I	CGCG	2 cut(s)	560, 2046
Bsh1285I	CGRYCG	1 cut(s)	58
BshFI	GGCC	8 cut(s)	86, 256, 534, 566, 764, 1262, 1559, 1905
BshNI	GGYRCC	1 cut(s)	578
BshTI	ACCGGT	1 cut(s)	803
BsiEI	CGRYCG	1 cut(s)	58
BsiHKAI	GWGCWC	6 cut(s)	282, 392, 599, 699, 880, 1390
BsiHKCI	CYCGRG	1 cut(s)	379
BslFI	GGGAC	2 cut(s)	288, 532
BslI	CCNNNNNNNGG	8 cut(s)	252, 469, 793, 810, 869, 889, 1600, 2023
BsmAI	GTCTC	3 cut(s)	1641, 1737, 1834
BsmFI	GGGAC	2 cut(s)	288, 532
BsmI	GAATGC	3 cut(s)	931, 1300, 1534
BsnI	GGCC	8 cut(s)	86, 256, 534, 566, 764, 1262, 1559, 1905
BsoBI	CYCGRG	1 cut(s)	379
Bsp119I	TTCGAA	1 cut(s)	1597
Bsp120I	GGGCCC	1 cut(s)	254
Bsp13I	TCCGGA	2 cut(s)	194, 667
Bsp1407I	TGTACA	1 cut(s)	1016
Bsp1720I	GCTNAGC	1 cut(s)	1441
Bsp68I	TCGCGA	1 cut(s)	2046
BspANI	GGCC	8 cut(s)	86, 256, 534, 566, 764, 1262, 1559, 1905
BspCNI	CTCAG	4 cut(s)	66, 964, 1303, 1452
BspEI	TCCGGA	2 cut(s)	194, 667
BspFNI	CGCG	2 cut(s)	560, 2046
BspMAI	CTGCAG	1 cut(s)	960
BspMI	ACCTGC	1 cut(s)	907
BspPI	GGATC	8 cut(s)	205, 339, 659, 672, 854, 867, 1325, 1463
BspT104I	TTCGAA	1 cut(s)	1597
BspT107I	GGYRCC	1 cut(s)	578
BsrBI	CCGCTC	3 cut(s)	153, 1121, 1798
BsrDI	GCAATG	2 cut(s)	1408, 1871
BsrFI	RCCGGY	1 cut(s)	803
BsrGI	TGTACA	1 cut(s)	1016
BsrI	ACTGG	1 cut(s)	186
BssAI	RCCGGY	1 cut(s)	803
BssECI	CCNNGG	5 cut(s)	535, 585, 950, 1396, 1833
BssNI	GRCGYC	2 cut(s)	36, 579
BssSI	CACGAG	3 cut(s)	340, 1389, 1734
Bst2BI	CACGAG	3 cut(s)	340, 1389, 1734
Bst2UI	CCWGG	5 cut(s)	33, 931, 951, 1556, 1824
Bst4CI	ACNGT	2 cut(s)	887, 2012
Bst6I	CTCTTC	4 cut(s)	638, 666, 674, 1415
BstACI	GRCGYC	2 cut(s)	36, 579
BstAUI	TGTACA	1 cut(s)	1016
BstBI	TTCGAA	1 cut(s)	1597
BstC8I	GCNNGC	8 cut(s)	9, 122, 162, 278, 1438, 1507, 1619, 1871
BstDEI	CTNAG	7 cut(s)	74, 905, 972, 1215, 1311, 1441, 1460
BstDSI	CCRYGG	3 cut(s)	535, 1396, 1833
BstF5I	GGATG	5 cut(s)	449, 970, 1233, 1530, 1913
BstFNI	CGCG	2 cut(s)	560, 2046
BstH2I	RGCGCY	1 cut(s)	582
BstHHI	GCGC	2 cut(s)	560, 581
BstMAI	GTCTC	3 cut(s)	1641, 1737, 1834
BstMCI	CGRYCG	1 cut(s)	58
BstNI	CCWGG	5 cut(s)	33, 931, 951, 1556, 1824
BstSFI	CTRYAG	2 cut(s)	700, 956
BstSLI	GKGCMC	3 cut(s)	258, 1396, 2039
BstUI	CGCG	2 cut(s)	560, 2046
BstV2I	GAAGAC	3 cut(s)	938, 1551, 1950
BstX2I	RGATCY	3 cut(s)	344, 664, 859
BstXI	CCANNNNNNTGG	1 cut(s)	155
BstYI	RGATCY	3 cut(s)	344, 664, 859
BsuRI	GGCC	8 cut(s)	86, 256, 534, 566, 764, 1262, 1559, 1905
BtgI	CCRYGG	3 cut(s)	535, 1396, 1833
BtrI	CACGTC	1 cut(s)	1028
BtsCI	GGATG	5 cut(s)	449, 970, 1233, 1530, 1913
BtsI	GCAGTG	1 cut(s)	165
BtsIMutI	CAGTG	3 cut(s)	71, 165, 1428
BtuMI	TCGCGA	1 cut(s)	2046
BveI	ACCTGC	1 cut(s)	907
Cac8I	GCNNGC	8 cut(s)	9, 122, 162, 278, 1438, 1507, 1619, 1871
CfoI	GCGC	2 cut(s)	560, 581
Cfr10I	RCCGGY	1 cut(s)	803
Cfr13I	GGNCC	7 cut(s)	243, 254, 255, 489, 1261, 1558, 1837
CseI	GACGC	2 cut(s)	25, 1341
CsiI	ACCWGGT	1 cut(s)	1822
Csp6I	GTAC	2 cut(s)	1017, 1985
CspAI	ACCGGT	1 cut(s)	803
CviAII	CATG	3 cut(s)	1709, 1751, 1888
CviQI	GTAC	2 cut(s)	1017, 1985
DdeI	CTNAG	7 cut(s)	74, 905, 972, 1215, 1311, 1441, 1460
DinI	GGCGCC	1 cut(s)	580
DraIII	CACNNNGTG	2 cut(s)	1031, 1901
DrdI	GACNNNNNNGTC	1 cut(s)	1655
DseDI	GACNNNNNNGTC	1 cut(s)	1655
EaeI	YGGCCR	4 cut(s)	532, 564, 762, 1903
Eam1104I	CTCTTC	4 cut(s)	638, 666, 674, 1415
EarI	CTCTTC	4 cut(s)	638, 666, 674, 1415
EciI	GGCGGA	3 cut(s)	349, 385, 642
Ecl136II	GAGCTC	5 cut(s)	280, 390, 597, 878, 1388
Eco24I	GRGCYC	9 cut(s)	122, 162, 258, 282, 392, 515, 599, 880, 1390
Eco47I	GGWCC	3 cut(s)	243, 489, 1837
Eco53kI	GAGCTC	5 cut(s)	280, 390, 597, 878, 1388
Eco57I	CTGAAG	2 cut(s)	1257, 1452
Eco88I	CYCGRG	1 cut(s)	379
EcoICRI	GAGCTC	5 cut(s)	280, 390, 597, 878, 1388
EcoO109I	RGGNCCY	2 cut(s)	254, 1558
EcoRII	CCWGG	5 cut(s)	31, 929, 949, 1554, 1822
EcoT38I	GRGCYC	9 cut(s)	122, 162, 258, 282, 392, 515, 599, 880, 1390
EgeI	GGCGCC	1 cut(s)	580
EheI	GGCGCC	1 cut(s)	580
FaeI	CATG	3 cut(s)	1712, 1754, 1891
FalI	AAGNNNNNCTT	4 cut(s)	83, 115, 1578, 1610
FaqI	GGGAC	2 cut(s)	288, 532
FatI	CATG	3 cut(s)	1708, 1750, 1887
FauI	CCCGC	2 cut(s)	463, 543
FauNDI	CATATG	1 cut(s)	443
FblI	GTMKAC	1 cut(s)	39
FokI	GGATG	5 cut(s)	436, 977, 1240, 1537, 1900
FriOI	GRGCYC	9 cut(s)	122, 162, 258, 282, 392, 515, 599, 880, 1390
FspBI	CTAG	3 cut(s)	809, 1343, 1622
GlaI	GCGC	2 cut(s)	559, 580
GsaI	CCCAGC	4 cut(s)	690, 821, 1105, 1955
GsuI	CTGGAG	5 cut(s)	169, 274, 478, 583, 1104
HaeII	RGCGCY	1 cut(s)	582
HaeIII	GGCC	8 cut(s)	86, 256, 534, 566, 764, 1262, 1559, 1905
HgaI	GACGC	2 cut(s)	25, 1341
HhaI	GCGC	2 cut(s)	560, 581
Hin1I	GRCGYC	2 cut(s)	36, 579
Hin1II	CATG	3 cut(s)	1712, 1754, 1891
Hin6I	GCGC	2 cut(s)	558, 579
HinP1I	GCGC	2 cut(s)	558, 579
HincII	GTYRAC	2 cut(s)	40, 1936
HindII	GTYRAC	2 cut(s)	40, 1936
HindIII	AAGCTT	1 cut(s)	1517
HinfI	GANTC	7 cut(s)	41, 68, 142, 484, 1067, 1160, 1697
HphI	GGTGA	8 cut(s)	604, 688, 841, 872, 1393, 1463, 1781, 1872
Hpy166II	GTNNAC	5 cut(s)	40, 403, 1428, 1820, 1936
Hpy188III	TCNNGA	9 cut(s)	195, 495, 600, 668, 1660, 1676, 1793, 1996, 2045
Hpy8I	GTNNAC	5 cut(s)	40, 403, 1428, 1820, 1936
Hpy99I	CGWCG	5 cut(s)	41, 412, 506, 1032, 1357
HpyAV	CCTTC	5 cut(s)	1278, 1482, 1593, 1604, 2017
HpyCH4III	ACNGT	2 cut(s)	887, 2012
HpyCH4IV	ACGT	2 cut(s)	504, 1027
HpyF3I	CTNAG	7 cut(s)	74, 905, 972, 1215, 1311, 1441, 1460
HpySE526I	ACGT	2 cut(s)	504, 1027
Hsp92I	GRCGYC	2 cut(s)	36, 579
Hsp92II	CATG	3 cut(s)	1712, 1754, 1891
HspAI	GCGC	2 cut(s)	558, 579
KasI	GGCGCC	1 cut(s)	578
Kpn2I	TCCGGA	2 cut(s)	194, 667
LweI	GCATC	9 cut(s)	946, 955, 1012, 1012, 1144, 1218, 1616, 1627, 1862
MabI	ACCWGGT	1 cut(s)	1822
MaeI	CTAG	3 cut(s)	809, 1343, 1622
MaeII	ACGT	2 cut(s)	504, 1027
MaeIII	GTNAC	5 cut(s)	65, 335, 975, 1300, 1878
MbiI	CCGCTC	3 cut(s)	153, 1121, 1798
MfeI	CAATTG	1 cut(s)	747
MflI	RGATCY	3 cut(s)	344, 664, 859
Mly113I	GGCGCC	1 cut(s)	579
MlyI	GAGTC	4 cut(s)	35, 62, 136, 1061
MmeI	TCCRAC	2 cut(s)	191, 837
MroI	TCCGGA	2 cut(s)	194, 667
MseI	TTAA	5 cut(s)	231, 371, 1008, 1515, 1569
MspA1I	CMGCKG	1 cut(s)	136
MunI	CAATTG	1 cut(s)	747
Mva1269I	GAATGC	3 cut(s)	931, 1300, 1534
MvaI	CCWGG	5 cut(s)	33, 931, 951, 1556, 1824
MvnI	CGCG	2 cut(s)	560, 2046
NarI	GGCGCC	1 cut(s)	579
NciI	CCSGG	8 cut(s)	13, 227, 316, 333, 436, 454, 517, 788
NdeI	CATATG	1 cut(s)	443
NlaIII	CATG	3 cut(s)	1712, 1754, 1891
NmeAIII	GCCGAG	2 cut(s)	438, 2042
NmuCI	GTSAC	3 cut(s)	65, 335, 1878
NruI	TCGCGA	1 cut(s)	2046
NspV	TTCGAA	1 cut(s)	1597
PaqCI	CACCTGC	1 cut(s)	907
PcsI	WCGNNNNNNNCGW	2 cut(s)	416, 582
PctI	GAATGC	3 cut(s)	931, 1300, 1534
PfeI	GAWTC	3 cut(s)	484, 1160, 1697
PflMI	CCANNNNNTGG	1 cut(s)	889
PfoI	TCCNGGA	2 cut(s)	452, 515
PinAI	ACCGGT	1 cut(s)	803
Ple19I	CGATCG	1 cut(s)	58
PleI	GAGTC	4 cut(s)	35, 62, 136, 1061
PluTI	GGCGCC	1 cut(s)	582
PpsI	GAGTC	4 cut(s)	35, 62, 136, 1061
Psp124BI	GAGCTC	5 cut(s)	282, 392, 599, 880, 1390
Psp6I	CCWGG	5 cut(s)	31, 929, 949, 1554, 1822
PspFI	CCCAGC	4 cut(s)	686, 817, 1101, 1951
PspGI	CCWGG	5 cut(s)	31, 929, 949, 1554, 1822
PspOMI	GGGCCC	1 cut(s)	254
PspPI	GGNCC	7 cut(s)	243, 254, 255, 489, 1261, 1558, 1837
PstI	CTGCAG	1 cut(s)	960
PsuI	RGATCY	3 cut(s)	344, 664, 859
PvuI	CGATCG	1 cut(s)	58
RruI	TCGCGA	1 cut(s)	2046
RsaI	GTAC	2 cut(s)	1018, 1986
RsaNI	GTAC	2 cut(s)	1017, 1985
SacI	GAGCTC	5 cut(s)	282, 392, 599, 880, 1390
SalI	GTCGAC	1 cut(s)	38
SaqAI	TTAA	5 cut(s)	231, 371, 1008, 1515, 1569
Sau96I	GGNCC	7 cut(s)	243, 254, 255, 489, 1261, 1558, 1837
SchI	GAGTC	4 cut(s)	35, 62, 136, 1061
SexAI	ACCWGGT	1 cut(s)	1822
SfaNI	GCATC	9 cut(s)	946, 955, 1012, 1012, 1144, 1218, 1616, 1627, 1862
SfcI	CTRYAG	2 cut(s)	700, 956
SfoI	GGCGCC	1 cut(s)	580
SfuI	TTCGAA	1 cut(s)	1597
SinI	GGWCC	3 cut(s)	243, 489, 1837
SmlI	CTYRAG	5 cut(s)	464, 1660, 1713, 1793, 1928
SmoI	CTYRAG	5 cut(s)	464, 1660, 1713, 1793, 1928
SspDI	GGCGCC	1 cut(s)	578
SspI	AATATT	1 cut(s)	1785
SspMI	CTAG	3 cut(s)	809, 1343, 1622
SstI	GAGCTC	5 cut(s)	282, 392, 599, 880, 1390
TaaI	ACNGT	2 cut(s)	887, 2012
TaiI	ACGT	2 cut(s)	507, 1030
TaqI	TCGA	5 cut(s)	39, 111, 419, 1597, 1635
TaqII	GACCGA	1 cut(s)	2053
TatI	WGTACW	1 cut(s)	1016
TfiI	GAWTC	3 cut(s)	484, 1160, 1697
Tru1I	TTAA	5 cut(s)	231, 371, 1008, 1515, 1569
Tru9I	TTAA	5 cut(s)	231, 371, 1008, 1515, 1569
TscAI	CASTG	3 cut(s)	78, 172, 1435
TseFI	GTSAC	3 cut(s)	65, 335, 1878
Tsp45I	GTSAC	3 cut(s)	65, 335, 1878
TspDTI	ATGAA	4 cut(s)	1697, 1701, 1772, 1876
TspGWI	ACGGA	3 cut(s)	53, 994, 1822
TspRI	CASTG	3 cut(s)	78, 172, 1435
Van91I	CCANNNNNTGG	1 cut(s)	889
VpaK11BI	GGWCC	3 cut(s)	243, 489, 1837
XapI	RAATTY	2 cut(s)	1184, 1921
XmiI	GTMKAC	1 cut(s)	39
XspI	CTAG	3 cut(s)	809, 1343, 1622

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.