Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0006030

Physical Location & Seq

Genomic Coordinates Forward (+)

19693149 .. 19696247

Gene Structure 3099 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g18830.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2100 bp

ATGTCGCATTCCGGGAAGCCCATTTCGGAGCAGCTCGGCCTAGACTCGCTTAACGATCGATTCCGTGACTCGCTGAGTTGCGAAGCCAACAAGCCCGATTTCCGAGAACTCGATCTAGGTTCGCCCGTTTCGCCTCTTCGGACTCGCCAGAGCGGCGGCATCGCCACTGCTACAAGCAGTAGCTCCAGCTCATCCGGATCGGTTTCCGGCCGAAATGGGCCCAACCCAGTTGCCAGAAGGGCCGATTCAGCCCCCAACAACCACTCCGGCGAGCTATCCGGCTCTAGCGAGAGCAGTCCCACCGCCGCAGATAGCGCCCGATCCGCTGGAAACACCCGCAGTTTCAAACCGGGTCATACAACGGGTTCCACCCACCCGCTTATATACTCGGGTCAGAGCTCCGTGAGCTCTCCGCCGCCCAGTGTTTTGCCCACGGGGAACATATGCCCATCTGGGAAATTCTTAAAAACGGGTATGGTCCCGAACCGGAGCTCCAGAACCGACGTTTTGGGTTCGGGTACGGGGAATTATGGTCATGGGAGCATAATGCGGGGCGGTCAGGCTGCTAAAGGCGGCAGCAGTGAGGCAGCGAGTTCCCTGAGTTTGAGGGCGAGCGCCATGAGTTCGAGGGGTACCGGCGGCAACGGAGACTTGTTGAAGAGAACAATGGTGAATGTGGATCCAGAGGAGGTGAAGAGAGCTGGGAATGAGCAGTACAGAAGAGGCCATTTCGCAGAGGCTTTGAGCTTGTACGATCGGGCGATTGCATTGTCTCCGGCCAATGCTGCCTACCGGAGTAACCGCGCGGCAGCATTAACGGGTCTAGGACGGCTGACGGAGGCGGTGAGGGAATGTGAGGAGGCGGTGAGGTTGGATCCCAGTTATGGCAGAGCTCACCAGCGTTTGGGGTCTTTGTTTCTTAGGTTAGGGCGGGTCGAGAATGCCCGGAGACACCTTTGTTTTCCCGGGCTGCAGCCAGATCCAGCTGAGTTACAGAAATTGCAGGCAGTAGAGAAGCATCTAAAAAGATGTACAGATTCCCGTCGTGTAGGAGATTGGAGAAGTGTATTGAGGGAATGCGATTCTACTATTGCTTCTGGAGCTGACTCTTCTCCTCAGCTCTATATGTGTAGAGCGGAAGCGCTTCTGAAGCTCCACCAAATTGATGACGCCGAATCAGTCGTATTGAATACACCTAGATTAGACACTCATTCCGACCTTTCACAATCTAAGTTCTTTGGGATGCTTTCTGAAGCTTACACTAACTTTGTCTTGGCCCAAATTGAATTGGCATTTGGAAGGTTTGAGAATGCAGTTACTGCTGCTGAGAAAGCAGGACAGATTGATTCCCGAAACATTGAAGCTGCAGTGCTGCTAAGTAATGTGCGCTTGGTTATGAGAGCTCGTGCCCGTGGCAATGATCTCTTCAAGTCCGAAAGGTTCACAGAAGCTTGCGCAGCATATGGAGAAGGTCTAAGGGTTGATCCTTCAAACTCTGTTCTCTATTGCAACAGAGCGGCTTGTTGGTTTAAACTTGGGATGTGGGAGCGATCCATTGAAGACTGCAACCAGGCCCTATGTATTAAACATAATTACACAAAAGCCCTTCTCCGAAGGGCTGCCTCAAACAGAAAGCTAGAAAGATGGATAGAGGCTTCAAAAGATTATGAGGTCTTGAGAAGGTTGCTCCCTGATGACAATGAAGTTGCTGAATCTTTGTTTCATGCTCAAATTGCATTAAAAAAATCCCGTGAGGAAGAAGTTTCTAATTTGAAGTTTGGCCGTGAAGTGGAAGAAATATTAGGTCTTGAGCAGTTCAGAGCTGTGATATCTTTACCAGGTGTCTCCGTGGTCCATTTCAAAGCCGCCTCTGATTTGCAATGCAAGCAAATATCACCTTTTCTGGACATGCTTTGTGGTCGCTACCCATCCATAAATTTCCTCAAGGTTGACATTGAAGAAAACGCGGCAGTTGCAAACAGCGAAAATGTAAGGATTGTACCAACATTCAAGATTTACAAAAATGGGAGCCGAGTGAAGGAAATGGTGCGCCCCAGTCGCGATATGTTGGAACACTCGGTCAGGCATTATAGCTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0006950 GO:0006970 GO:0008150 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0010033 GO:0010646 GO:0010647 GO:0023051 GO:0023056 GO:0033993 GO:0042221 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0065007 GO:0097305 GO:1901419 GO:1901421 GO:1901700 GO:1905957 GO:1905959

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_1 TPR_11 TPR_16 TPR_19 TPR_2 TPR_8 Thioredoxin

Protein Analysis

700

Amino Acids

76.32

Weight (kDa)

9.06

Isoelectric Point (pI)

55.54

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006030)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53300
fragaria_vesca	FvH4_3g18510 FvH4_3g18510
malus_domestica	MD03G1241500.v1.1 MD11G1260800.v1.1 MD15G1393600.v1.1
prunus_persica	Prupe.4G167400_v2.0.a1 Prupe.4G167400_v2.0.a1 Prupe.4G167400_v2.0.a1
pyrus_communis	pycom03g18830 pycom11g23020
rosa_chinensis	RchiOBHm_Chr5g0031271
rosa_laevigata	RLG00000033297
rosa_multiflora	Rmu_co8169312.1_g000001 Rmu_sc0006236.1_g000002 Rmu_sc0010698.1_g000009 Rmu_sc0027117.1_g000001
rosa_roxburghii	Rroxscaffold_1G00049020
rosa_rugosa	Rorug05G0123400
rosa_samantha	Rh5AG216900 Rh5BG216400 Rh5BG505500 Rh5CG240100 Rh5CG529200 Rh5DG221600 Rh7DG001600
rosa_wichuraiana	Rw5G019840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1456
Acc65I	GGTACC	1 cut(s)	632
AccB1I	GGYRCC	1 cut(s)	632
AccB7I	CCANNNNNTGG	1 cut(s)	904
AccBSI	CCGCTC	3 cut(s)	153, 1136, 1517
AccII	CGCG	4 cut(s)	804, 806, 1967, 2061
AccIII	TCCGGA	1 cut(s)	194
AclWI	GGATC	9 cut(s)	205, 315, 674, 687, 869, 882, 974, 1478, 1545
AcoI	YGGCCR	3 cut(s)	208, 777, 1780
AcsI	RAATTY	2 cut(s)	458, 1936
AcuI	CTGAAG	2 cut(s)	1169, 1272
AcyI	GRCGYC	1 cut(s)	1170
AfaI	GTAC	6 cut(s)	520, 634, 716, 752, 1033, 2001
AfeI	AGCGCT	1 cut(s)	1143
AfiI	CCNNNNNNNGG	4 cut(s)	884, 904, 1789, 2038
AjnI	CCWGG	2 cut(s)	1569, 1837
AjuI	GAANNNNNNNTTGG	2 cut(s)	1278, 1310
AloI	GAACNNNNNNTCC	2 cut(s)	476, 508
Alw21I	GWGCWC	5 cut(s)	401, 410, 494, 895, 1405
Alw26I	GTCTC	4 cut(s)	642, 777, 943, 1849
AlwI	GGATC	9 cut(s)	205, 315, 674, 687, 869, 882, 974, 1478, 1545
AlwNI	CAGNNNCTG	1 cut(s)	1319
Ama87I	CYCGRG	2 cut(s)	388, 965
Aor13HI	TCCGGA	1 cut(s)	194
Aor51HI	AGCGCT	1 cut(s)	1143
AoxI	GGCC	9 cut(s)	37, 208, 218, 240, 724, 777, 1275, 1572, 1780
ApaI	GGGCCC	1 cut(s)	222
ApoI	RAATTY	2 cut(s)	458, 1936
Asp700I	GAANNNNTTC	1 cut(s)	1143
Asp718I	GGTACC	1 cut(s)	632
AspLEI	GCGC	7 cut(s)	317, 617, 806, 1144, 1389, 1457, 2052
AspS9I	GGNCC	7 cut(s)	218, 219, 240, 478, 1276, 1573, 1852
AsuC2I	CCSGG	5 cut(s)	13, 351, 946, 966, 967
AsuHPI	GGTGA	6 cut(s)	682, 703, 856, 877, 887, 1887
AvaI	CYCGRG	2 cut(s)	388, 965
AvaII	GGWCC	2 cut(s)	478, 1852
BaeGI	GKGCMC	2 cut(s)	222, 1411
BamHI	GGATCC	2 cut(s)	679, 874
BanI	GGYRCC	1 cut(s)	632
BanII	GRGCYC	6 cut(s)	222, 401, 410, 494, 895, 1405
BauI	CACGAG	1 cut(s)	1404
BbsI	GAAGAC	1 cut(s)	1566
Bbv12I	GWGCWC	5 cut(s)	401, 410, 494, 895, 1405
BbvCI	CCTCAGC	1 cut(s)	1116
BccI	CCATC	3 cut(s)	457, 1638, 1936
BceAI	ACGGC	2 cut(s)	845, 1767
BciT130I	CCWGG	2 cut(s)	1571, 1839
BcnI	CCSGG	5 cut(s)	13, 351, 946, 966, 967
BcoDI	GTCTC	4 cut(s)	642, 777, 943, 1849
BfaI	CTAG	6 cut(s)	41, 116, 285, 824, 1197, 1637
BfmI	CTRYAG	2 cut(s)	971, 1365
BfoI	RGCGCY	3 cut(s)	318, 618, 1145
BglI	GCCNNNNNGGC	2 cut(s)	153, 239
Bme1390I	CCNGG	7 cut(s)	13, 351, 946, 966, 967, 1571, 1839
Bme18I	GGWCC	2 cut(s)	478, 1852
BmeT110I	CYCGRG	2 cut(s)	388, 965
BmgT120I	GGNCC	7 cut(s)	218, 219, 240, 478, 1276, 1573, 1852
BmiI	GGNNCC	7 cut(s)	220, 367, 480, 634, 681, 876, 2030
BmrFI	CCNGG	7 cut(s)	13, 351, 946, 966, 967, 1571, 1839
BmrI	ACTGGG	4 cut(s)	221, 414, 873, 2049
BmsI	GCATC	3 cut(s)	168, 1027, 1233
BmuI	ACTGGG	4 cut(s)	221, 414, 873, 2049
BpiI	GAAGAC	1 cut(s)	1566
BpmI	CTGGAG	3 cut(s)	169, 478, 1119
Bpu10I	CCTNAGC	1 cut(s)	1116
BpuEI	CTTGAG	3 cut(s)	1696, 1829, 1928
BpuMI	CCSGG	5 cut(s)	13, 351, 946, 966, 967
Bsa29I	ATCGAT	1 cut(s)	58
BsaHI	GRCGYC	1 cut(s)	1170
BsaJI	CCNNGG	4 cut(s)	432, 965, 1411, 1848
BsaWI	WCCGGW	3 cut(s)	194, 486, 792
BsaXI	ACNNNNNCTCC	4 cut(s)	248, 278, 476, 506
Bsc4I	CCNNNNNNNGG	4 cut(s)	884, 904, 1789, 2038
Bse118I	RCCGGY	1 cut(s)	635
Bse1I	ACTGG	4 cut(s)	227, 420, 879, 2055
Bse3DI	GCAATG	2 cut(s)	1423, 1886
BseAI	TCCGGA	1 cut(s)	194
BseBI	CCWGG	2 cut(s)	1571, 1839
BseCI	ATCGAT	1 cut(s)	58
BseDI	CCNNGG	4 cut(s)	432, 965, 1411, 1848
BseGI	GGATG	4 cut(s)	191, 1248, 1545, 1928
BseLI	CCNNNNNNNGG	4 cut(s)	884, 904, 1789, 2038
BseMI	GCAATG	2 cut(s)	1423, 1886
BseMII	CTCAG	5 cut(s)	65, 590, 978, 1130, 1317
BseNI	ACTGG	4 cut(s)	227, 420, 879, 2055
BseRI	GAGGAG	3 cut(s)	701, 872, 1104
BseSI	GKGCMC	2 cut(s)	222, 1411
BseX3I	CGGCCG	1 cut(s)	208
BseYI	CCCAGC	1 cut(s)	701
Bsh1236I	CGCG	4 cut(s)	804, 806, 1967, 2061
Bsh1285I	CGRYCG	3 cut(s)	58, 211, 757
BshFI	GGCC	9 cut(s)	39, 210, 220, 242, 726, 779, 1277, 1574, 1782
BshNI	GGYRCC	1 cut(s)	632
BshVI	ATCGAT	1 cut(s)	58
BsiEI	CGRYCG	3 cut(s)	58, 211, 757
BsiHKAI	GWGCWC	5 cut(s)	401, 410, 494, 895, 1405
BsiHKCI	CYCGRG	2 cut(s)	388, 965
BslFI	GGGAC	2 cut(s)	282, 464
BslI	CCNNNNNNNGG	4 cut(s)	884, 904, 1789, 2038
BsmAI	GTCTC	4 cut(s)	642, 777, 943, 1849
BsmFI	GGGAC	2 cut(s)	282, 464
BsmI	GAATGC	4 cut(s)	7, 946, 1082, 1315
BsnI	GGCC	9 cut(s)	39, 210, 220, 242, 726, 779, 1277, 1574, 1782
BsoBI	CYCGRG	2 cut(s)	388, 965
Bsp120I	GGGCCC	1 cut(s)	218
Bsp1286I	GDGCHC	7 cut(s)	222, 401, 410, 494, 895, 1405, 1411
Bsp13I	TCCGGA	1 cut(s)	194
Bsp1407I	TGTACA	1 cut(s)	1031
Bsp68I	TCGCGA	1 cut(s)	2061
BspANI	GGCC	9 cut(s)	39, 210, 220, 242, 726, 779, 1277, 1574, 1782
BspCNI	CTCAG	5 cut(s)	66, 591, 979, 1129, 1318
BspDI	ATCGAT	1 cut(s)	58
BspEI	TCCGGA	1 cut(s)	194
BspFNI	CGCG	4 cut(s)	804, 806, 1967, 2061
BspLI	GGNNCC	7 cut(s)	220, 367, 480, 634, 681, 876, 2030
BspMAI	CTGCAG	2 cut(s)	975, 1369
BspPI	GGATC	9 cut(s)	205, 315, 674, 687, 869, 882, 974, 1478, 1545
BspT107I	GGYRCC	1 cut(s)	632
BsrBI	CCGCTC	3 cut(s)	153, 1136, 1517
BsrDI	GCAATG	2 cut(s)	1423, 1886
BsrFI	RCCGGY	1 cut(s)	635
BsrGI	TGTACA	1 cut(s)	1031
BsrI	ACTGG	4 cut(s)	227, 420, 879, 2055
BssAI	RCCGGY	1 cut(s)	635
BssECI	CCNNGG	4 cut(s)	432, 965, 1411, 1848
BssNI	GRCGYC	1 cut(s)	1170
BssSI	CACGAG	1 cut(s)	1404
Bst2BI	CACGAG	1 cut(s)	1404
Bst2UI	CCWGG	2 cut(s)	1571, 1839
Bst6I	CTCTTC	6 cut(s)	141, 653, 689, 715, 1114, 1430
BstACI	GRCGYC	1 cut(s)	1170
BstAPI	GCANNNNNTGC	1 cut(s)	1319
BstAUI	TGTACA	1 cut(s)	1031
BstC8I	GCNNGC	5 cut(s)	272, 613, 1005, 1453, 1886
BstDEI	CTNAG	9 cut(s)	74, 599, 920, 987, 1116, 1230, 1326, 1376, 1475
BstDSI	CCRYGG	3 cut(s)	432, 1411, 1848
BstF5I	GGATG	4 cut(s)	191, 1248, 1545, 1928
BstFNI	CGCG	4 cut(s)	804, 806, 1967, 2061
BstH2I	RGCGCY	3 cut(s)	318, 618, 1145
BstHHI	GCGC	7 cut(s)	317, 617, 806, 1144, 1389, 1457, 2052
BstMAI	GTCTC	4 cut(s)	642, 777, 943, 1849
BstMCI	CGRYCG	3 cut(s)	58, 211, 757
BstNI	CCWGG	2 cut(s)	1571, 1839
BstNSI	RCATGY	1 cut(s)	1912
BstSCI	CCNGG	7 cut(s)	11, 349, 944, 964, 965, 1569, 1837
BstSFI	CTRYAG	2 cut(s)	971, 1365
BstSLI	GKGCMC	2 cut(s)	222, 1411
BstUI	CGCG	4 cut(s)	804, 806, 1967, 2061
BstV2I	GAAGAC	1 cut(s)	1566
BstX2I	RGATCY	3 cut(s)	679, 874, 979
BstYI	RGATCY	3 cut(s)	679, 874, 979
BstZI	CGGCCG	1 cut(s)	208
Bsu15I	ATCGAT	1 cut(s)	58
BsuRI	GGCC	9 cut(s)	39, 210, 220, 242, 726, 779, 1277, 1574, 1782
BsuTUI	ATCGAT	1 cut(s)	58
BtgI	CCRYGG	3 cut(s)	432, 1411, 1848
BtgZI	GCGATG	1 cut(s)	145
BtsCI	GGATG	4 cut(s)	191, 1248, 1545, 1928
BtsI	GCAGTG	3 cut(s)	165, 586, 1374
BtsIMutI	CAGTG	4 cut(s)	165, 427, 586, 1374
BtuMI	TCGCGA	1 cut(s)	2061
Cac8I	GCNNGC	5 cut(s)	272, 613, 1005, 1453, 1886
CaiI	CAGNNNCTG	1 cut(s)	1319
CfoI	GCGC	7 cut(s)	317, 617, 806, 1144, 1389, 1457, 2052
Cfr10I	RCCGGY	1 cut(s)	635
Cfr13I	GGNCC	7 cut(s)	218, 219, 240, 478, 1276, 1573, 1852
Cfr9I	CCCGGG	1 cut(s)	965
ClaI	ATCGAT	1 cut(s)	58
CseI	GACGC	1 cut(s)	1178
CsiI	ACCWGGT	1 cut(s)	1837
Csp6I	GTAC	6 cut(s)	519, 633, 715, 751, 1032, 2000
CviAII	CATG	4 cut(s)	536, 619, 1724, 1909
CviQI	GTAC	6 cut(s)	519, 633, 715, 751, 1032, 2000
DdeI	CTNAG	9 cut(s)	74, 599, 920, 987, 1116, 1230, 1326, 1376, 1475
DraI	TTTAAA	1 cut(s)	1531
EaeI	YGGCCR	3 cut(s)	208, 777, 1780
EagI	CGGCCG	1 cut(s)	208
Eam1104I	CTCTTC	6 cut(s)	141, 653, 689, 715, 1114, 1430
EarI	CTCTTC	6 cut(s)	141, 653, 689, 715, 1114, 1430
EciI	GGCGGA	1 cut(s)	402
Ecl136II	GAGCTC	5 cut(s)	399, 408, 492, 893, 1403
EclXI	CGGCCG	1 cut(s)	208
Eco24I	GRGCYC	6 cut(s)	222, 401, 410, 494, 895, 1405
Eco32I	GATATC	1 cut(s)	1830
Eco47I	GGWCC	2 cut(s)	478, 1852
Eco47III	AGCGCT	1 cut(s)	1143
Eco52I	CGGCCG	1 cut(s)	208
Eco53kI	GAGCTC	5 cut(s)	399, 408, 492, 893, 1403
Eco57I	CTGAAG	2 cut(s)	1169, 1272
Eco88I	CYCGRG	2 cut(s)	388, 965
EcoICRI	GAGCTC	5 cut(s)	399, 408, 492, 893, 1403
EcoO109I	RGGNCCY	1 cut(s)	1573
EcoRII	CCWGG	2 cut(s)	1569, 1837
EcoRV	GATATC	1 cut(s)	1830
EcoT38I	GRGCYC	6 cut(s)	222, 401, 410, 494, 895, 1405
FaeI	CATG	4 cut(s)	539, 622, 1727, 1912
FaqI	GGGAC	2 cut(s)	282, 464
FatI	CATG	4 cut(s)	535, 618, 1723, 1908
FauI	CCCGC	4 cut(s)	344, 384, 543, 924
FauNDI	CATATG	2 cut(s)	443, 1462
FokI	GGATG	4 cut(s)	178, 1255, 1552, 1915
FriOI	GRGCYC	6 cut(s)	222, 401, 410, 494, 895, 1405
FspBI	CTAG	6 cut(s)	41, 116, 285, 824, 1197, 1637
FspI	TGCGCA	1 cut(s)	1456
GlaI	GCGC	7 cut(s)	316, 616, 805, 1143, 1388, 1456, 2051
GsaI	CCCAGC	1 cut(s)	705
GsuI	CTGGAG	3 cut(s)	169, 478, 1119
HaeII	RGCGCY	3 cut(s)	318, 618, 1145
HaeIII	GGCC	9 cut(s)	39, 210, 220, 242, 726, 779, 1277, 1574, 1782
HgaI	GACGC	1 cut(s)	1178
HhaI	GCGC	7 cut(s)	317, 617, 806, 1144, 1389, 1457, 2052
Hin1I	GRCGYC	1 cut(s)	1170
Hin1II	CATG	4 cut(s)	539, 622, 1727, 1912
Hin6I	GCGC	7 cut(s)	315, 615, 804, 1142, 1387, 1455, 2050
HinP1I	GCGC	7 cut(s)	315, 615, 804, 1142, 1387, 1455, 2050
HincII	GTYRAC	1 cut(s)	1951
HindII	GTYRAC	1 cut(s)	1951
HindIII	AAGCTT	2 cut(s)	1254, 1449
HphI	GGTGA	6 cut(s)	682, 703, 856, 877, 887, 1887
Hpy166II	GTNNAC	2 cut(s)	1443, 1951
Hpy8I	GTNNAC	2 cut(s)	1443, 1951
Hpy99I	CGWCG	2 cut(s)	506, 1047
HpyAV	CCTTC	8 cut(s)	231, 1293, 1463, 1497, 1608, 1616, 1674, 2032
HpyCH4IV	ACGT	1 cut(s)	504
HpyF3I	CTNAG	9 cut(s)	74, 599, 920, 987, 1116, 1230, 1326, 1376, 1475
HpySE526I	ACGT	1 cut(s)	504
Hsp92I	GRCGYC	1 cut(s)	1170
Hsp92II	CATG	4 cut(s)	539, 622, 1727, 1912
HspAI	GCGC	7 cut(s)	315, 615, 804, 1142, 1387, 1455, 2050
Kpn2I	TCCGGA	1 cut(s)	194
KpnI	GGTACC	1 cut(s)	636
LweI	GCATC	3 cut(s)	168, 1027, 1233
MabI	ACCWGGT	1 cut(s)	1837
MaeI	CTAG	6 cut(s)	41, 116, 285, 824, 1197, 1637
MaeII	ACGT	1 cut(s)	504
MaeIII	GTNAC	4 cut(s)	65, 797, 990, 1315
MbiI	CCGCTC	3 cut(s)	153, 1136, 1517
MflI	RGATCY	3 cut(s)	679, 874, 979
MhlI	GDGCHC	7 cut(s)	222, 401, 410, 494, 895, 1405, 1411
MlyI	GAGTC	4 cut(s)	38, 62, 136, 1100
MmeI	TCCRAC	3 cut(s)	852, 1239, 2049
MroI	TCCGGA	1 cut(s)	194
MroXI	GAANNNNTTC	1 cut(s)	1143
MseI	TTAA	6 cut(s)	51, 464, 815, 1530, 1584, 1739
MspA1I	CMGCKG	2 cut(s)	326, 986
MspR9I	CCNGG	7 cut(s)	13, 351, 946, 966, 967, 1571, 1839
MssI	GTTTAAAC	1 cut(s)	1531
Mva1269I	GAATGC	4 cut(s)	7, 946, 1082, 1315
MvaI	CCWGG	2 cut(s)	1571, 1839
MvnI	CGCG	4 cut(s)	804, 806, 1967, 2061
NciI	CCSGG	5 cut(s)	13, 351, 946, 966, 967
NdeI	CATATG	2 cut(s)	443, 1462
NlaIII	CATG	4 cut(s)	539, 622, 1727, 1912
NlaIV	GGNNCC	7 cut(s)	220, 367, 480, 634, 681, 876, 2030
NmeAIII	GCCGAG	2 cut(s)	15, 2057
NmuCI	GTSAC	1 cut(s)	65
NruI	TCGCGA	1 cut(s)	2061
NsbI	TGCGCA	1 cut(s)	1456
NspI	RCATGY	1 cut(s)	1912
PctI	GAATGC	4 cut(s)	7, 946, 1082, 1315
PdmI	GAANNNNTTC	1 cut(s)	1143
PfeI	GAWTC	7 cut(s)	60, 245, 1037, 1082, 1175, 1346, 1712
PflMI	CCANNNNNTGG	1 cut(s)	904
PfoI	TCCNGGA	1 cut(s)	11
Ple19I	CGATCG	2 cut(s)	58, 757
PleI	GAGTC	4 cut(s)	38, 62, 136, 1100
PmeI	GTTTAAAC	1 cut(s)	1531
PpsI	GAGTC	4 cut(s)	38, 62, 136, 1100
Psp124BI	GAGCTC	5 cut(s)	401, 410, 494, 895, 1405
Psp6I	CCWGG	2 cut(s)	1569, 1837
PspFI	CCCAGC	1 cut(s)	701
PspGI	CCWGG	2 cut(s)	1569, 1837
PspN4I	GGNNCC	7 cut(s)	220, 367, 480, 634, 681, 876, 2030
PspOMI	GGGCCC	1 cut(s)	218
PspPI	GGNCC	7 cut(s)	218, 219, 240, 478, 1276, 1573, 1852
PstI	CTGCAG	2 cut(s)	975, 1369
PstNI	CAGNNNCTG	1 cut(s)	1319
PsuI	RGATCY	3 cut(s)	679, 874, 979
PvuI	CGATCG	2 cut(s)	58, 757
PvuII	CAGCTG	1 cut(s)	986
RruI	TCGCGA	1 cut(s)	2061
RsaI	GTAC	6 cut(s)	520, 634, 716, 752, 1033, 2001
RsaNI	GTAC	6 cut(s)	519, 633, 715, 751, 1032, 2000
SacI	GAGCTC	5 cut(s)	401, 410, 494, 895, 1405
SaqAI	TTAA	6 cut(s)	51, 464, 815, 1530, 1584, 1739
Sau96I	GGNCC	7 cut(s)	218, 219, 240, 478, 1276, 1573, 1852
SchI	GAGTC	4 cut(s)	38, 62, 136, 1100
ScrFI	CCNGG	7 cut(s)	13, 351, 946, 966, 967, 1571, 1839
SduI	GDGCHC	7 cut(s)	222, 401, 410, 494, 895, 1405, 1411
SexAI	ACCWGGT	1 cut(s)	1837
SfaNI	GCATC	3 cut(s)	168, 1027, 1233
SfcI	CTRYAG	2 cut(s)	971, 1365
SinI	GGWCC	2 cut(s)	478, 1852
SmaI	CCCGGG	1 cut(s)	967
SmlI	CTYRAG	3 cut(s)	1675, 1808, 1943
SmoI	CTYRAG	3 cut(s)	1675, 1808, 1943
SspI	AATATT	1 cut(s)	1800
SspMI	CTAG	6 cut(s)	41, 116, 285, 824, 1197, 1637
SstI	GAGCTC	5 cut(s)	401, 410, 494, 895, 1405
StyD4I	CCNGG	7 cut(s)	11, 349, 944, 964, 965, 1569, 1837
TaiI	ACGT	1 cut(s)	507
TaqI	TCGA	4 cut(s)	58, 111, 626, 936
TaqII	GACCGA	1 cut(s)	2068
TatI	WGTACW	2 cut(s)	714, 1031
TfiI	GAWTC	7 cut(s)	60, 245, 1037, 1082, 1175, 1346, 1712
Tru1I	TTAA	6 cut(s)	51, 464, 815, 1530, 1584, 1739
Tru9I	TTAA	6 cut(s)	51, 464, 815, 1530, 1584, 1739
TscAI	CASTG	4 cut(s)	172, 427, 586, 1374
TseFI	GTSAC	1 cut(s)	65
Tsp45I	GTSAC	1 cut(s)	65
TspDTI	ATGAA	2 cut(s)	1712, 1716
TspGWI	ACGGA	5 cut(s)	53, 391, 660, 851, 1837
TspMI	CCCGGG	1 cut(s)	965
TspRI	CASTG	4 cut(s)	172, 427, 586, 1374
Van91I	CCANNNNNTGG	1 cut(s)	904
VpaK11BI	GGWCC	2 cut(s)	478, 1852
XapI	RAATTY	2 cut(s)	458, 1936
XceI	RCATGY	1 cut(s)	1912
XmaI	CCCGGG	1 cut(s)	965
XmnI	GAANNNNTTC	1 cut(s)	1143
XspI	CTAG	6 cut(s)	41, 116, 285, 824, 1197, 1637

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.