Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0006030

Physical Location & Seq

Genomic Coordinates Reverse (-)

24895950 .. 24900081

Gene Structure 4132 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG221600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2076 bp

ATGTCGCACGCCGGGAAGCCCATTTCGGAGCCAGGCGTCGACTCCTCGCTCTCCGATCGCCTCCGTGACTCACTGAGTTGCGAGGCCAACAAGCCCGACTTCCGAGAACTCGATCTGGGCTCGCCCGTTTCGCCGCTGCGGACTCGCCAGAGCGGTGGGCTCGCCACTGCCACCAGCAGCAGCTCCAGTTCGTCCGGATCGGTGTCGGGTCGGAATGGAACCAACCCGGTTAATGCGATAAGGTCCGGTTCGGGGCCCAACAACAACCACTCCGGCGAGCTCTCCGGCTCCAGCGAGAGCAGTCCCACAAATACCCGGAATAGCTCCAAACCGGGTCACACGAGATCCAATTCCGGCTCCGCCCACCCGTTAATTTACTCGGGTCAGAGCTCCTCCGCCGTGAACTCGTCGCCGAGATCGAATGTTCTGCCCACCGGGAACATATGCCCATCCGGGAAAATCCTCAAGGCGGGTATGGTTCCGAATCGGACCTCCAGAACCGACGTTTTGGGCTCCGGGACGGGCTACTACGGCCACGGGAGCATAATGCGGGGCGGCGCGGCGGCCAAGAGTGTCGGCGCCGCCGAGGCGGTGAGCTCCAGAACAAGTGGCGGCGGCGGAGGAGAGTTGGGGAAGAGAGGAATGGGGAGTGTGGATCCGGAAGAGGTGAAGAGAGCTGGGAATGAGCACTACAGAAGAGGCAATTTTGCAGAGGCTTTGAGCTTTTATGATCGGGCAATTGCTTTGGCTCCGGCCAATGCAGCTTACCGGAGCAACCGGGCTGCGGCATTGACCGGTCTAGGGCGGCTGGGGGAGGCGGTGAGGGAGTGTGAGGAGGCTGTGAAGTTGGATCCCAATTATGGCAGAGCTCACCACCGTTTGGGTTCTTTGTTTCTTAGGTTAGGGCAGGTGGAGAATGCCAGGAGGCATCTTTGTCTTCCAGGGCTGCAGCCGGATGCGGCTGAATTACGGAAATTAGAGGTAGTAGAGAAGCATCTTAAAAAATGTACAGATGCACGTCGTGTAGGAGATTGGAAAAGTGTATTGAGGGAAAATGACTCTGCTATTGCTGCTGGAGCTGACTTTTCTCCCCAGCTCTCTATGTGTAGAGCGGAAGCACATTTGAAGCTCCACCAAATTGATGATGCTGAATCAGTCCTATCAAATATACCCAAATTAGACACATATACCAACTCCTCACAATCTAAGTTCTTTGGGATGCTTTCTGAAGCATATACTTACTTTGTCTTGGCCCAAATTGAGATGGCATTTGGAAGGTTTGAGAATGCAGTTACTTCTGCTGAGAAAGCTGGAAAGATTGATCCCCGAAACCTAGAAGTTGCGTCGCTGCTTCAAAATGTGCGAATGGTGGTGAGAGCTCGTGCCCGTGGCAATGATCTCTTCAAGTCTGAAAGGTTCACCGAAGCGTGCTTAGCTTATGGTGATGGTCTGAGGCTTGATCCTTCAAACTCTGTTCTATATTGCAACAGAGCAGCTTGCTGGTTTAAGCTTGGGATGTGGGAGCATTCCATTGAAGACTGCAACCAGGCCCTATGTATTAAACCGAATTACACAAAAGCTCTTCTTCGAAGGGCTGCATCAAACAGCAAGCTAGAAAGATGGGTCGATGCTGTTAGAGACTATGAGATCTTGAGGAGGGAGCTTCCTGATGACAATGAAGTTGCTGAATCATTGTTTCATGCTCAAGTTGCATTGAAAAAGTCTCGTGGGGAAGAAGTGCATAATATGAAGTTTGGGGGTGAAGTAGAAGAAATATTGGGTCTTGAGCAGTTTAGAGCTGCAATATGTTTACCAGGTGTCTCCGTGGTCCATTTCAAAGCAGCATCCAATTTGCAATGCAAGCAAATATCACCTTTCGTGGACACGCTCTGTGGCCGCTACCCATCCATAAATTTCCTCAAGGTTGACATTGAAGAAAGCCCAGCAGTTGCGAACATTGAAAATGTGAAGATTGTACCAACATTCAAGATATACAAAAACGGTAGCCGAGTGAAGGAAATGGTGTGCCCCTGTCGCGAAATGTTAGAACACTCGGTCAGGCATTATAGCTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0006950 GO:0006970 GO:0008150 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0010033 GO:0010646 GO:0010647 GO:0023051 GO:0023056 GO:0033993 GO:0042221 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0065007 GO:0097305 GO:1901419 GO:1901421 GO:1901700 GO:1905957 GO:1905959

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_1 TPR_11 TPR_16 TPR_19 TPR_2 TPR_8 Thioredoxin

Protein Analysis

691

Amino Acids

74.89

Weight (kDa)

8.91

Isoelectric Point (pI)

47.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_16	PF13432	226 - 286	2.1e-06	Tetratricopeptide repeat
TPR_1	PF00515	493 - 524	1.2e-06	Tetratricopeptide repeat
Thioredoxin	PF00085	598 - 677	1.8e-11	Thioredoxin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006030)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53300
fragaria_vesca	FvH4_3g18510 FvH4_3g18510
malus_domestica	MD03G1241500.v1.1 MD11G1260800.v1.1 MD15G1393600.v1.1
prunus_persica	Prupe.4G167400_v2.0.a1 Prupe.4G167400_v2.0.a1 Prupe.4G167400_v2.0.a1
pyrus_communis	pycom03g18830 pycom11g23020
rosa_chinensis	RchiOBHm_Chr5g0031271
rosa_laevigata	RLG00000033297
rosa_multiflora	Rmu_co8169312.1_g000001 Rmu_sc0006236.1_g000002 Rmu_sc0010698.1_g000009 Rmu_sc0027117.1_g000001
rosa_roxburghii	Rroxscaffold_1G00049020
rosa_rugosa	Rorug05G0123400
rosa_samantha	Rh5AG216900 Rh5BG216400 Rh5BG505500 Rh5CG240100 Rh5CG529200 Rh5DG221600 Rh7DG001600
rosa_wichuraiana	Rw5G019840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	898
Acc36I	ACCTGC	1 cut(s)	898
AccB1I	GGYRCC	1 cut(s)	578
AccB7I	CCANNNNNTGG	1 cut(s)	880
AccBSI	CCGCTC	2 cut(s)	153, 1112
AccI	GTMKAC	1 cut(s)	39
AccII	CGCG	2 cut(s)	560, 2037
AccIII	TCCGGA	2 cut(s)	194, 658
AclWI	GGATC	8 cut(s)	205, 339, 650, 663, 845, 858, 1316, 1454
AcoI	YGGCCR	4 cut(s)	532, 564, 753, 1894
AcsI	RAATTY	1 cut(s)	1912
AcuI	CTGAAG	1 cut(s)	1248
AcyI	GRCGYC	2 cut(s)	36, 579
AdeI	CACNNNGTG	1 cut(s)	1022
AfaI	GTAC	2 cut(s)	1009, 1977
AfiI	CCNNNNNNNGG	7 cut(s)	252, 469, 784, 801, 860, 880, 2014
AgeI	ACCGGT	1 cut(s)	794
AjiI	CACGTC	1 cut(s)	1019
AjnI	CCWGG	5 cut(s)	31, 920, 940, 1545, 1813
Alw21I	GWGCWC	6 cut(s)	282, 392, 599, 690, 871, 1381
Alw26I	GTCTC	3 cut(s)	1632, 1728, 1825
AlwI	GGATC	8 cut(s)	205, 339, 650, 663, 845, 858, 1316, 1454
Ama87I	CYCGRG	1 cut(s)	379
Aor13HI	TCCGGA	2 cut(s)	194, 658
AoxI	GGCC	8 cut(s)	84, 254, 532, 564, 753, 1251, 1548, 1894
ApaI	GGGCCC	1 cut(s)	258
ApoI	RAATTY	1 cut(s)	1912
AsiGI	ACCGGT	1 cut(s)	794
AspLEI	GCGC	2 cut(s)	560, 581
AspS9I	GGNCC	7 cut(s)	243, 254, 255, 489, 1252, 1549, 1828
AsuC2I	CCSGG	8 cut(s)	13, 227, 316, 333, 436, 454, 517, 779
AsuHPI	GGTGA	9 cut(s)	604, 679, 832, 863, 1384, 1411, 1454, 1772, 1863
AsuII	TTCGAA	1 cut(s)	1588
AvaI	CYCGRG	1 cut(s)	379
AvaII	GGWCC	3 cut(s)	243, 489, 1828
BaeGI	GKGCMC	3 cut(s)	258, 1387, 2030
BamHI	GGATCC	2 cut(s)	655, 850
BanI	GGYRCC	1 cut(s)	578
BanII	GRGCYC	9 cut(s)	122, 162, 258, 282, 392, 515, 599, 871, 1381
BauI	CACGAG	3 cut(s)	340, 1380, 1725
BbsI	GAAGAC	2 cut(s)	929, 1542
Bbv12I	GWGCWC	6 cut(s)	282, 392, 599, 690, 871, 1381
BccI	CCATC	5 cut(s)	457, 1258, 1439, 1614, 1912
BceAI	ACGGC	2 cut(s)	383, 547
BcgI	CGANNNNNNTGC	2 cut(s)	409, 443
BciT130I	CCWGG	5 cut(s)	33, 922, 942, 1547, 1815
BcnI	CCSGG	8 cut(s)	13, 227, 316, 333, 436, 454, 517, 779
BcoDI	GTCTC	3 cut(s)	1632, 1728, 1825
BfaI	CTAG	3 cut(s)	800, 1334, 1613
BfmI	CTRYAG	2 cut(s)	691, 947
BfoI	RGCGCY	1 cut(s)	582
BfuAI	ACCTGC	1 cut(s)	898
BglI	GCCNNNNNGGC	1 cut(s)	587
BglII	AGATCT	1 cut(s)	1647
BlpI	GCTNAGC	1 cut(s)	1432
Bme18I	GGWCC	3 cut(s)	243, 489, 1828
BmeT110I	CYCGRG	1 cut(s)	379
BmgBI	CACGTC	1 cut(s)	1019
BmgT120I	GGNCC	7 cut(s)	243, 254, 255, 489, 1252, 1549, 1828
BmsI	GCATC	9 cut(s)	937, 946, 1003, 1003, 1135, 1209, 1607, 1618, 1853
BpiI	GAAGAC	2 cut(s)	929, 1542
BpmI	CTGGAG	5 cut(s)	169, 274, 478, 583, 1095
Bpu1102I	GCTNAGC	1 cut(s)	1432
Bpu14I	TTCGAA	1 cut(s)	1588
BpuEI	CTTGAG	5 cut(s)	449, 1672, 1689, 1805, 1904
BpuMI	CCSGG	8 cut(s)	13, 227, 316, 333, 436, 454, 517, 779
BsaHI	GRCGYC	2 cut(s)	36, 579
BsaJI	CCNNGG	5 cut(s)	535, 585, 941, 1387, 1824
BsaWI	WCCGGW	5 cut(s)	194, 245, 658, 768, 794
BsaXI	ACNNNNNCTCC	2 cut(s)	254, 284
Bsc4I	CCNNNNNNNGG	7 cut(s)	252, 469, 784, 801, 860, 880, 2014
Bse118I	RCCGGY	1 cut(s)	794
Bse1I	ACTGG	1 cut(s)	186
Bse3DI	GCAATG	2 cut(s)	1399, 1862
BseAI	TCCGGA	2 cut(s)	194, 658
BseBI	CCWGG	5 cut(s)	33, 922, 942, 1547, 1815
BseDI	CCNNGG	5 cut(s)	535, 585, 941, 1387, 1824
BseGI	GGATG	6 cut(s)	449, 961, 1224, 1521, 1844, 1904
BseLI	CCNNNNNNNGG	7 cut(s)	252, 469, 784, 801, 860, 880, 2014
BseMI	GCAATG	2 cut(s)	1399, 1862
BseMII	CTCAG	3 cut(s)	65, 1293, 1442
BseNI	ACTGG	1 cut(s)	186
BseRI	GAGGAG	6 cut(s)	34, 382, 636, 848, 1186, 1669
BseSI	GKGCMC	3 cut(s)	258, 1387, 2030
BseYI	CCCAGC	4 cut(s)	677, 808, 1092, 1942
Bsh1236I	CGCG	2 cut(s)	560, 2037
Bsh1285I	CGRYCG	1 cut(s)	58
BshFI	GGCC	8 cut(s)	86, 256, 534, 566, 755, 1253, 1550, 1896
BshNI	GGYRCC	1 cut(s)	578
BshTI	ACCGGT	1 cut(s)	794
BsiEI	CGRYCG	1 cut(s)	58
BsiHKAI	GWGCWC	6 cut(s)	282, 392, 599, 690, 871, 1381
BsiHKCI	CYCGRG	1 cut(s)	379
BslFI	GGGAC	2 cut(s)	288, 532
BslI	CCNNNNNNNGG	7 cut(s)	252, 469, 784, 801, 860, 880, 2014
BsmAI	GTCTC	3 cut(s)	1632, 1728, 1825
BsmFI	GGGAC	2 cut(s)	288, 532
BsmI	GAATGC	3 cut(s)	922, 1291, 1525
BsnI	GGCC	8 cut(s)	86, 256, 534, 566, 755, 1253, 1550, 1896
BsoBI	CYCGRG	1 cut(s)	379
Bsp119I	TTCGAA	1 cut(s)	1588
Bsp120I	GGGCCC	1 cut(s)	254
Bsp13I	TCCGGA	2 cut(s)	194, 658
Bsp1407I	TGTACA	1 cut(s)	1007
Bsp1720I	GCTNAGC	1 cut(s)	1432
Bsp68I	TCGCGA	1 cut(s)	2037
BspANI	GGCC	8 cut(s)	86, 256, 534, 566, 755, 1253, 1550, 1896
BspCNI	CTCAG	3 cut(s)	66, 1294, 1443
BspEI	TCCGGA	2 cut(s)	194, 658
BspFNI	CGCG	2 cut(s)	560, 2037
BspMAI	CTGCAG	1 cut(s)	951
BspMI	ACCTGC	1 cut(s)	898
BspPI	GGATC	8 cut(s)	205, 339, 650, 663, 845, 858, 1316, 1454
BspQI	GCTCTTC	1 cut(s)	1587
BspT104I	TTCGAA	1 cut(s)	1588
BspT107I	GGYRCC	1 cut(s)	578
BsrBI	CCGCTC	2 cut(s)	153, 1112
BsrDI	GCAATG	2 cut(s)	1399, 1862
BsrFI	RCCGGY	1 cut(s)	794
BsrGI	TGTACA	1 cut(s)	1007
BsrI	ACTGG	1 cut(s)	186
BssAI	RCCGGY	1 cut(s)	794
BssECI	CCNNGG	5 cut(s)	535, 585, 941, 1387, 1824
BssNI	GRCGYC	2 cut(s)	36, 579
BssSI	CACGAG	3 cut(s)	340, 1380, 1725
Bst2BI	CACGAG	3 cut(s)	340, 1380, 1725
Bst2UI	CCWGG	5 cut(s)	33, 922, 942, 1547, 1815
Bst4CI	ACNGT	2 cut(s)	878, 2003
Bst6I	CTCTTC	6 cut(s)	629, 657, 665, 691, 1406, 1587
BstACI	GRCGYC	2 cut(s)	36, 579
BstAUI	TGTACA	1 cut(s)	1007
BstBI	TTCGAA	1 cut(s)	1588
BstC8I	GCNNGC	8 cut(s)	9, 122, 162, 278, 1429, 1498, 1610, 1862
BstDEI	CTNAG	6 cut(s)	74, 896, 1206, 1302, 1432, 1451
BstDSI	CCRYGG	3 cut(s)	535, 1387, 1824
BstF5I	GGATG	6 cut(s)	449, 961, 1224, 1521, 1844, 1904
BstFNI	CGCG	2 cut(s)	560, 2037
BstH2I	RGCGCY	1 cut(s)	582
BstHHI	GCGC	2 cut(s)	560, 581
BstMAI	GTCTC	3 cut(s)	1632, 1728, 1825
BstMCI	CGRYCG	1 cut(s)	58
BstNI	CCWGG	5 cut(s)	33, 922, 942, 1547, 1815
BstSFI	CTRYAG	2 cut(s)	691, 947
BstSLI	GKGCMC	3 cut(s)	258, 1387, 2030
BstUI	CGCG	2 cut(s)	560, 2037
BstV2I	GAAGAC	2 cut(s)	929, 1542
BstX2I	RGATCY	4 cut(s)	344, 655, 850, 1647
BstXI	CCANNNNNNTGG	1 cut(s)	155
BstYI	RGATCY	4 cut(s)	344, 655, 850, 1647
BsuRI	GGCC	8 cut(s)	86, 256, 534, 566, 755, 1253, 1550, 1896
BtgI	CCRYGG	3 cut(s)	535, 1387, 1824
BtrI	CACGTC	1 cut(s)	1019
BtsCI	GGATG	6 cut(s)	449, 961, 1224, 1521, 1844, 1904
BtsI	GCAGTG	1 cut(s)	165
BtsIMutI	CAGTG	2 cut(s)	71, 165
BtuMI	TCGCGA	1 cut(s)	2037
BveI	ACCTGC	1 cut(s)	898
Cac8I	GCNNGC	8 cut(s)	9, 122, 162, 278, 1429, 1498, 1610, 1862
CfoI	GCGC	2 cut(s)	560, 581
Cfr10I	RCCGGY	1 cut(s)	794
Cfr13I	GGNCC	7 cut(s)	243, 254, 255, 489, 1252, 1549, 1828
CseI	GACGC	2 cut(s)	25, 1332
CsiI	ACCWGGT	1 cut(s)	1813
Csp6I	GTAC	2 cut(s)	1008, 1976
CspAI	ACCGGT	1 cut(s)	794
CviAII	CATG	1 cut(s)	1700
CviQI	GTAC	2 cut(s)	1008, 1976
DdeI	CTNAG	6 cut(s)	74, 896, 1206, 1302, 1432, 1451
DinI	GGCGCC	1 cut(s)	580
DraIII	CACNNNGTG	1 cut(s)	1022
EaeI	YGGCCR	4 cut(s)	532, 564, 753, 1894
Eam1104I	CTCTTC	6 cut(s)	629, 657, 665, 691, 1406, 1587
EarI	CTCTTC	6 cut(s)	629, 657, 665, 691, 1406, 1587
EciI	GGCGGA	3 cut(s)	349, 385, 633
Ecl136II	GAGCTC	5 cut(s)	280, 390, 597, 869, 1379
Eco24I	GRGCYC	9 cut(s)	122, 162, 258, 282, 392, 515, 599, 871, 1381
Eco47I	GGWCC	3 cut(s)	243, 489, 1828
Eco53kI	GAGCTC	5 cut(s)	280, 390, 597, 869, 1379
Eco57I	CTGAAG	1 cut(s)	1248
Eco88I	CYCGRG	1 cut(s)	379
EcoICRI	GAGCTC	5 cut(s)	280, 390, 597, 869, 1379
EcoO109I	RGGNCCY	2 cut(s)	254, 1549
EcoRII	CCWGG	5 cut(s)	31, 920, 940, 1545, 1813
EcoT38I	GRGCYC	9 cut(s)	122, 162, 258, 282, 392, 515, 599, 871, 1381
EgeI	GGCGCC	1 cut(s)	580
EheI	GGCGCC	1 cut(s)	580
FaeI	CATG	1 cut(s)	1703
FalI	AAGNNNNNCTT	4 cut(s)	83, 115, 1569, 1601
FaqI	GGGAC	2 cut(s)	288, 532
FatI	CATG	1 cut(s)	1699
FauI	CCCGC	2 cut(s)	463, 543
FauNDI	CATATG	1 cut(s)	443
FblI	GTMKAC	1 cut(s)	39
FokI	GGATG	6 cut(s)	436, 968, 1231, 1528, 1831, 1891
FriOI	GRGCYC	9 cut(s)	122, 162, 258, 282, 392, 515, 599, 871, 1381
FspBI	CTAG	3 cut(s)	800, 1334, 1613
GlaI	GCGC	2 cut(s)	559, 580
GsaI	CCCAGC	4 cut(s)	681, 812, 1096, 1946
GsuI	CTGGAG	5 cut(s)	169, 274, 478, 583, 1095
HaeII	RGCGCY	1 cut(s)	582
HaeIII	GGCC	8 cut(s)	86, 256, 534, 566, 755, 1253, 1550, 1896
HgaI	GACGC	2 cut(s)	25, 1332
HhaI	GCGC	2 cut(s)	560, 581
Hin1I	GRCGYC	2 cut(s)	36, 579
Hin1II	CATG	1 cut(s)	1703
Hin6I	GCGC	2 cut(s)	558, 579
HinP1I	GCGC	2 cut(s)	558, 579
HincII	GTYRAC	2 cut(s)	40, 1927
HindII	GTYRAC	2 cut(s)	40, 1927
HindIII	AAGCTT	1 cut(s)	1508
HinfI	GANTC	7 cut(s)	41, 68, 142, 484, 1058, 1151, 1688
HphI	GGTGA	9 cut(s)	604, 679, 832, 863, 1384, 1411, 1454, 1772, 1863
Hpy166II	GTNNAC	6 cut(s)	40, 403, 1419, 1811, 1882, 1927
Hpy188III	TCNNGA	9 cut(s)	195, 495, 600, 659, 1651, 1667, 1784, 1987, 2036
Hpy8I	GTNNAC	6 cut(s)	40, 403, 1419, 1811, 1882, 1927
Hpy99I	CGWCG	5 cut(s)	41, 412, 506, 1023, 1348
HpyAV	CCTTC	4 cut(s)	1269, 1473, 1584, 2008
HpyCH4III	ACNGT	2 cut(s)	878, 2003
HpyCH4IV	ACGT	2 cut(s)	504, 1018
HpyF3I	CTNAG	6 cut(s)	74, 896, 1206, 1302, 1432, 1451
HpySE526I	ACGT	2 cut(s)	504, 1018
Hsp92I	GRCGYC	2 cut(s)	36, 579
Hsp92II	CATG	1 cut(s)	1703
HspAI	GCGC	2 cut(s)	558, 579
KasI	GGCGCC	1 cut(s)	578
Kpn2I	TCCGGA	2 cut(s)	194, 658
LguI	GCTCTTC	1 cut(s)	1587
LweI	GCATC	9 cut(s)	937, 946, 1003, 1003, 1135, 1209, 1607, 1618, 1853
MabI	ACCWGGT	1 cut(s)	1813
MaeI	CTAG	3 cut(s)	800, 1334, 1613
MaeII	ACGT	2 cut(s)	504, 1018
MaeIII	GTNAC	3 cut(s)	65, 335, 1291
MbiI	CCGCTC	2 cut(s)	153, 1112
MfeI	CAATTG	1 cut(s)	738
MflI	RGATCY	4 cut(s)	344, 655, 850, 1647
Mly113I	GGCGCC	1 cut(s)	579
MlyI	GAGTC	4 cut(s)	35, 62, 136, 1052
MmeI	TCCRAC	2 cut(s)	191, 828
MroI	TCCGGA	2 cut(s)	194, 658
MseI	TTAA	5 cut(s)	231, 371, 999, 1506, 1560
MspA1I	CMGCKG	1 cut(s)	136
MunI	CAATTG	1 cut(s)	738
Mva1269I	GAATGC	3 cut(s)	922, 1291, 1525
MvaI	CCWGG	5 cut(s)	33, 922, 942, 1547, 1815
MvnI	CGCG	2 cut(s)	560, 2037
NarI	GGCGCC	1 cut(s)	579
NciI	CCSGG	8 cut(s)	13, 227, 316, 333, 436, 454, 517, 779
NdeI	CATATG	1 cut(s)	443
NlaIII	CATG	1 cut(s)	1703
NmeAIII	GCCGAG	3 cut(s)	438, 610, 2033
NmuCI	GTSAC	2 cut(s)	65, 335
NruI	TCGCGA	1 cut(s)	2037
NspV	TTCGAA	1 cut(s)	1588
PaqCI	CACCTGC	1 cut(s)	898
PciSI	GCTCTTC	1 cut(s)	1587
PcsI	WCGNNNNNNNCGW	2 cut(s)	416, 582
PctI	GAATGC	3 cut(s)	922, 1291, 1525
PfeI	GAWTC	3 cut(s)	484, 1151, 1688
PflMI	CCANNNNNTGG	1 cut(s)	880
PfoI	TCCNGGA	2 cut(s)	452, 515
PinAI	ACCGGT	1 cut(s)	794
Ple19I	CGATCG	1 cut(s)	58
PleI	GAGTC	4 cut(s)	35, 62, 136, 1052
PluTI	GGCGCC	1 cut(s)	582
PpsI	GAGTC	4 cut(s)	35, 62, 136, 1052
Psp124BI	GAGCTC	5 cut(s)	282, 392, 599, 871, 1381
Psp6I	CCWGG	5 cut(s)	31, 920, 940, 1545, 1813
PspFI	CCCAGC	4 cut(s)	677, 808, 1092, 1942
PspGI	CCWGG	5 cut(s)	31, 920, 940, 1545, 1813
PspOMI	GGGCCC	1 cut(s)	254
PspPI	GGNCC	7 cut(s)	243, 254, 255, 489, 1252, 1549, 1828
PstI	CTGCAG	1 cut(s)	951
PsuI	RGATCY	4 cut(s)	344, 655, 850, 1647
PvuI	CGATCG	1 cut(s)	58
RruI	TCGCGA	1 cut(s)	2037
RsaI	GTAC	2 cut(s)	1009, 1977
RsaNI	GTAC	2 cut(s)	1008, 1976
SacI	GAGCTC	5 cut(s)	282, 392, 599, 871, 1381
SalI	GTCGAC	1 cut(s)	38
SapI	GCTCTTC	1 cut(s)	1587
SaqAI	TTAA	5 cut(s)	231, 371, 999, 1506, 1560
Sau96I	GGNCC	7 cut(s)	243, 254, 255, 489, 1252, 1549, 1828
SchI	GAGTC	4 cut(s)	35, 62, 136, 1052
SexAI	ACCWGGT	1 cut(s)	1813
SfaNI	GCATC	9 cut(s)	937, 946, 1003, 1003, 1135, 1209, 1607, 1618, 1853
SfcI	CTRYAG	2 cut(s)	691, 947
SfoI	GGCGCC	1 cut(s)	580
SfuI	TTCGAA	1 cut(s)	1588
SinI	GGWCC	3 cut(s)	243, 489, 1828
SmlI	CTYRAG	5 cut(s)	464, 1651, 1704, 1784, 1919
SmoI	CTYRAG	5 cut(s)	464, 1651, 1704, 1784, 1919
SspDI	GGCGCC	1 cut(s)	578
SspI	AATATT	1 cut(s)	1776
SspMI	CTAG	3 cut(s)	800, 1334, 1613
SstI	GAGCTC	5 cut(s)	282, 392, 599, 871, 1381
TaaI	ACNGT	2 cut(s)	878, 2003
TaiI	ACGT	2 cut(s)	507, 1021
TaqI	TCGA	5 cut(s)	39, 111, 419, 1588, 1626
TaqII	GACCGA	1 cut(s)	2044
TatI	WGTACW	1 cut(s)	1007
TfiI	GAWTC	3 cut(s)	484, 1151, 1688
Tru1I	TTAA	5 cut(s)	231, 371, 999, 1506, 1560
Tru9I	TTAA	5 cut(s)	231, 371, 999, 1506, 1560
TscAI	CASTG	2 cut(s)	78, 172
TseFI	GTSAC	2 cut(s)	65, 335
Tsp45I	GTSAC	2 cut(s)	65, 335
TspDTI	ATGAA	3 cut(s)	1688, 1692, 1763
TspGWI	ACGGA	3 cut(s)	53, 985, 1813
TspRI	CASTG	2 cut(s)	78, 172
Van91I	CCANNNNNTGG	1 cut(s)	880
VpaK11BI	GGWCC	3 cut(s)	243, 489, 1828
XapI	RAATTY	1 cut(s)	1912
XmiI	GTMKAC	1 cut(s)	39
XspI	CTAG	3 cut(s)	800, 1334, 1613

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.