Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0006030

Physical Location & Seq

Genomic Coordinates Reverse (-)

24993083 .. 24997551

Gene Structure 4469 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG216400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGTCGCACGCCGGGAAGCCCATTTCGGAGCCAGGCGTCGACTCCTCGCTCTCCGATCGCCTCCGTGACTCACTGAGTTGCGAGGCCAACAAGCCCGACTTCCGAGAACTCGATCTGGGCTCGCCCGTTTCGCCGCTGCGGACTCGCCAGAGCGGCGGGCTCGCCACTGCCACCAGCAGCAGCTCCAGTTCGTCCGGATCGGTGTCGGGTCGGAATGGAACCAACCCGGTTAATGCGAAGAGGTCCGGTTCGGGGCCCAACAACAACCACTCCGGCGAGCTCTCCGGCTCCAGCGAGAGCAGTCCCACCAATACGCGGAATAGCTCCAAACCGGGTCACACGAGATCCAATTCCGGCTCCGCCCACCCGTTAATTTACTCGGGTCAGAGCTCCTCCGCCGTGAACTCGTCGCCGAGATCGAATGTTCTGCCCACCGGGAACATATGCCCATCCGGGAAAATCCTCAAGGCGGGAATGGTTCCGAATCGGACCTCCAGAACCGACGTTTTGGGCTCCGGGACGGGCTATTACGGCCACGGGAGCATAATGCGGGGCGGCGCGGCGGCCAAGAGTGTCGGCGCCACCGAGGCGGTGAGCTCCAGAACAAGTGGCGGCGGAGGAGAGTTGGGGAAGAGAGGAATGGGGAGTGTGGATCCGGAAGAGGTGAAGAGAGCTGGGAATGAGCACTACAGAAGAGGCAATTTTGCAGAGGCTTTGAGCTTGTATGATCGGGCAATTGCTTTGGCTCCGGCCAATGCGGCTTACCGGAGCAACCGGGCTGCGGCATTGACCGGTCTAGGGCGGCTGGGGGAGGCGGTGAGGGAGTGCGAAGAGGCTGTGAAGTTGGATCCCAATTATGGCAGAGCTCACCACCGTTTGGGTTCTTTGTTTCTTAGGTTAGGGCAGGTGGAGAATGCCAGGAGGCATCTTTGTCTTCCAGGGCTGCAGCCGGATGCGGCTGAGTTACGGAAATTAGAGGTAGTAGAGAAGCATCTTAAAAAATGTACAGATGCACGTCGTGTAGGAGATTGGAAAAGTGTATTGAGGGAAAATGACTCTGCTATTGCTGCTGGAGCTGACTTTTCTCCCCAGCTCTCTATGTGTAGAGCGGAAGCACATTTGAAGCTCCACCAAATTGATGATGCTGAATCAGTCCTATCAAATATACCCAAATTTGACACATATACCAACTCCTCACAATCTAAGTTCTTTGGGATGCTTTCTGAAGCATATACTTACTTTGTCTTGGCCCAAATTGAGATGGCATTTGGAAGGTTTGAGAATGCAGTTACTTCTGCTGAGAAAGCTGGAAAGATTGATCCCCGAAACCTAGAAGTTGCGTCGCTGCTTCAAAATGTGCGAATGGTGGTGAGAGCTCGTGCCCGTGGCAATGATCTCTTCAAGTCTGAAAGGTTCACTGAAGCATGCTTAGCTTATGGTGATGGTCTGAGGCTTGATCCTTCAAACTCTGTTCTATATTGCAACAGAGCAGCTTGCTGGTTTAAGCTTGGGATGTGGGAGCATTCCATTGAAGACTGCAACCAGGCCCTATGTATTAAACCGAATTACACAAAAGCTCTCCTTCGAAGGGCTGCATCAAACAGCAAGCTAGAAAGATGGGTCGATGCTGTTAGAGACTATGAGGTCTTGAGGAGGGAGCTTCCTGATGACAATGAAGTTGCTGAATCATTGTTTCATGCTCAAGTTGCATTGAAAAAGTCTCGTGGGGAAGAAGTGCATGATATGAAGTTTGGGGGTGAAGTAGAAGAAATATTGGGTCTTGAGCGGTTCAGAGCTGCAATATGTTTACCAGGTAGGCCTTCATATTTTTACATGCCTGTCACATGTTCATGTTTACAGTTGCGTCATTGTACAAGTGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0006950 GO:0006970 GO:0008150 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0010033 GO:0010646 GO:0010647 GO:0023051 GO:0023056 GO:0033993 GO:0042221 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0065007 GO:0097305 GO:1901419 GO:1901421 GO:1901700 GO:1905957 GO:1905959

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_1 TPR_11 TPR_16 TPR_19 TPR_2 TPR_8 Thioredoxin

Protein Analysis

627

Amino Acids

67.79

Weight (kDa)

8.97

Isoelectric Point (pI)

50.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_16	PF13432	225 - 285	6.9e-08	Tetratricopeptide repeat
TPR_11	PF13414	226 - 267	6.6e-06	TPR repeat
TPR_1	PF00515	492 - 523	1e-06	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006030)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53300
fragaria_vesca	FvH4_3g18510 FvH4_3g18510
malus_domestica	MD03G1241500.v1.1 MD11G1260800.v1.1 MD15G1393600.v1.1
prunus_persica	Prupe.4G167400_v2.0.a1 Prupe.4G167400_v2.0.a1 Prupe.4G167400_v2.0.a1
pyrus_communis	pycom03g18830 pycom11g23020
rosa_chinensis	RchiOBHm_Chr5g0031271
rosa_laevigata	RLG00000033297
rosa_multiflora	Rmu_co8169312.1_g000001 Rmu_sc0006236.1_g000002 Rmu_sc0010698.1_g000009 Rmu_sc0027117.1_g000001
rosa_roxburghii	Rroxscaffold_1G00049020
rosa_rugosa	Rorug05G0123400
rosa_samantha	Rh5AG216900 Rh5BG216400 Rh5BG505500 Rh5CG240100 Rh5CG529200 Rh5DG221600 Rh7DG001600
rosa_wichuraiana	Rw5G019840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	895
AasI	GACNNNNNNGTC	1 cut(s)	1643
Acc36I	ACCTGC	1 cut(s)	895
AccB1I	GGYRCC	1 cut(s)	578
AccB7I	CCANNNNNTGG	1 cut(s)	877
AccBSI	CCGCTC	3 cut(s)	153, 1109, 1786
AccI	GTMKAC	1 cut(s)	39
AccII	CGCG	2 cut(s)	316, 560
AccIII	TCCGGA	2 cut(s)	194, 655
AclWI	GGATC	8 cut(s)	205, 339, 647, 660, 842, 855, 1313, 1451
AcoI	YGGCCR	3 cut(s)	532, 564, 750
AcsI	RAATTY	1 cut(s)	1172
AcuI	CTGAAG	2 cut(s)	1245, 1440
AcyI	GRCGYC	2 cut(s)	36, 579
AdeI	CACNNNGTG	1 cut(s)	1019
AfaI	GTAC	2 cut(s)	1006, 1873
AfiI	CCNNNNNNNGG	8 cut(s)	252, 315, 469, 781, 798, 857, 877, 1588
AflIII	ACRYGT	1 cut(s)	1844
AgeI	ACCGGT	1 cut(s)	791
AgsI	TTSAA	6 cut(s)	1123, 1352, 1402, 1464, 1532, 1714
AjiI	CACGTC	1 cut(s)	1016
AjnI	CCWGG	5 cut(s)	31, 917, 937, 1542, 1810
Alw21I	GWGCWC	6 cut(s)	282, 392, 599, 687, 868, 1378
Alw26I	GTCTC	2 cut(s)	1629, 1725
AlwI	GGATC	8 cut(s)	205, 339, 647, 660, 842, 855, 1313, 1451
Ama87I	CYCGRG	1 cut(s)	379
Aor13HI	TCCGGA	2 cut(s)	194, 655
AoxI	GGCC	8 cut(s)	84, 254, 532, 564, 750, 1248, 1545, 1817
ApaI	GGGCCC	1 cut(s)	258
ApoI	RAATTY	1 cut(s)	1172
AsiGI	ACCGGT	1 cut(s)	791
AspLEI	GCGC	2 cut(s)	560, 581
AspS9I	GGNCC	6 cut(s)	243, 254, 255, 489, 1249, 1546
AsuC2I	CCSGG	7 cut(s)	13, 227, 333, 436, 454, 517, 776
AsuHPI	GGTGA	7 cut(s)	604, 676, 829, 860, 1381, 1451, 1769
AsuII	TTCGAA	1 cut(s)	1585
AvaI	CYCGRG	1 cut(s)	379
AvaII	GGWCC	2 cut(s)	243, 489
BaeGI	GKGCMC	2 cut(s)	258, 1384
BamHI	GGATCC	2 cut(s)	652, 847
BanI	GGYRCC	1 cut(s)	578
BanII	GRGCYC	9 cut(s)	122, 162, 258, 282, 392, 515, 599, 868, 1378
BauI	CACGAG	3 cut(s)	340, 1377, 1722
BbsI	GAAGAC	2 cut(s)	926, 1539
Bbv12I	GWGCWC	6 cut(s)	282, 392, 599, 687, 868, 1378
BccI	CCATC	4 cut(s)	457, 1255, 1436, 1611
BceAI	ACGGC	2 cut(s)	383, 547
BcgI	CGANNNNNNTGC	2 cut(s)	409, 443
BciT130I	CCWGG	5 cut(s)	33, 919, 939, 1544, 1812
BcnI	CCSGG	7 cut(s)	13, 227, 333, 436, 454, 517, 776
BcoDI	GTCTC	2 cut(s)	1629, 1725
BfaI	CTAG	3 cut(s)	797, 1331, 1610
BfmI	CTRYAG	2 cut(s)	688, 944
BfoI	RGCGCY	1 cut(s)	582
BfuAI	ACCTGC	1 cut(s)	895
BglI	GCCNNNNNGGC	3 cut(s)	153, 587, 758
BlpI	GCTNAGC	1 cut(s)	1429
Bme18I	GGWCC	2 cut(s)	243, 489
BmeT110I	CYCGRG	1 cut(s)	379
BmgBI	CACGTC	1 cut(s)	1016
BmgT120I	GGNCC	6 cut(s)	243, 254, 255, 489, 1249, 1546
BmsI	GCATC	8 cut(s)	934, 943, 1000, 1000, 1132, 1206, 1604, 1615
BpiI	GAAGAC	2 cut(s)	926, 1539
BpmI	CTGGAG	5 cut(s)	169, 274, 478, 583, 1092
Bpu1102I	GCTNAGC	1 cut(s)	1429
Bpu14I	TTCGAA	1 cut(s)	1585
BpuEI	CTTGAG	4 cut(s)	449, 1669, 1686, 1802
BpuMI	CCSGG	7 cut(s)	13, 227, 333, 436, 454, 517, 776
BsaHI	GRCGYC	2 cut(s)	36, 579
BsaJI	CCNNGG	4 cut(s)	535, 585, 938, 1384
BsaWI	WCCGGW	5 cut(s)	194, 245, 655, 765, 791
BsaXI	ACNNNNNCTCC	2 cut(s)	254, 284
Bsc4I	CCNNNNNNNGG	8 cut(s)	252, 315, 469, 781, 798, 857, 877, 1588
Bse118I	RCCGGY	1 cut(s)	791
Bse1I	ACTGG	1 cut(s)	186
Bse3DI	GCAATG	1 cut(s)	1396
BseAI	TCCGGA	2 cut(s)	194, 655
BseBI	CCWGG	5 cut(s)	33, 919, 939, 1544, 1812
BseDI	CCNNGG	4 cut(s)	535, 585, 938, 1384
BseGI	GGATG	4 cut(s)	449, 958, 1221, 1518
BseLI	CCNNNNNNNGG	8 cut(s)	252, 315, 469, 781, 798, 857, 877, 1588
BseMI	GCAATG	1 cut(s)	1396
BseMII	CTCAG	4 cut(s)	65, 951, 1290, 1439
BseNI	ACTGG	1 cut(s)	186
BseRI	GAGGAG	5 cut(s)	34, 382, 633, 1183, 1666
BseSI	GKGCMC	2 cut(s)	258, 1384
BseYI	CCCAGC	3 cut(s)	674, 805, 1089
Bsh1236I	CGCG	2 cut(s)	316, 560
Bsh1285I	CGRYCG	1 cut(s)	58
BshFI	GGCC	8 cut(s)	86, 256, 534, 566, 752, 1250, 1547, 1819
BshNI	GGYRCC	1 cut(s)	578
BshTI	ACCGGT	1 cut(s)	791
BsiEI	CGRYCG	1 cut(s)	58
BsiHKAI	GWGCWC	6 cut(s)	282, 392, 599, 687, 868, 1378
BsiHKCI	CYCGRG	1 cut(s)	379
BslFI	GGGAC	2 cut(s)	288, 532
BslI	CCNNNNNNNGG	8 cut(s)	252, 315, 469, 781, 798, 857, 877, 1588
BsmAI	GTCTC	2 cut(s)	1629, 1725
BsmFI	GGGAC	2 cut(s)	288, 532
BsmI	GAATGC	3 cut(s)	919, 1288, 1522
BsnI	GGCC	8 cut(s)	86, 256, 534, 566, 752, 1250, 1547, 1819
BsoBI	CYCGRG	1 cut(s)	379
Bsp119I	TTCGAA	1 cut(s)	1585
Bsp120I	GGGCCC	1 cut(s)	254
Bsp13I	TCCGGA	2 cut(s)	194, 655
Bsp1407I	TGTACA	2 cut(s)	1004, 1871
Bsp1720I	GCTNAGC	1 cut(s)	1429
BspANI	GGCC	8 cut(s)	86, 256, 534, 566, 752, 1250, 1547, 1819
BspCNI	CTCAG	4 cut(s)	66, 952, 1291, 1440
BspEI	TCCGGA	2 cut(s)	194, 655
BspFNI	CGCG	2 cut(s)	316, 560
BspMAI	CTGCAG	1 cut(s)	948
BspMI	ACCTGC	1 cut(s)	895
BspPI	GGATC	8 cut(s)	205, 339, 647, 660, 842, 855, 1313, 1451
BspT104I	TTCGAA	1 cut(s)	1585
BspT107I	GGYRCC	1 cut(s)	578
BsrBI	CCGCTC	3 cut(s)	153, 1109, 1786
BsrDI	GCAATG	1 cut(s)	1396
BsrFI	RCCGGY	1 cut(s)	791
BsrGI	TGTACA	2 cut(s)	1004, 1871
BsrI	ACTGG	1 cut(s)	186
BssAI	RCCGGY	1 cut(s)	791
BssECI	CCNNGG	4 cut(s)	535, 585, 938, 1384
BssNI	GRCGYC	2 cut(s)	36, 579
BssSI	CACGAG	3 cut(s)	340, 1377, 1722
Bst2BI	CACGAG	3 cut(s)	340, 1377, 1722
Bst2UI	CCWGG	5 cut(s)	33, 919, 939, 1544, 1812
Bst4CI	ACNGT	2 cut(s)	875, 1860
Bst6I	CTCTTC	7 cut(s)	233, 626, 654, 662, 688, 825, 1403
BstACI	GRCGYC	2 cut(s)	36, 579
BstAUI	TGTACA	2 cut(s)	1004, 1871
BstBI	TTCGAA	1 cut(s)	1585
BstC8I	GCNNGC	8 cut(s)	9, 122, 158, 162, 278, 1426, 1495, 1607
BstDEI	CTNAG	7 cut(s)	74, 893, 960, 1203, 1299, 1429, 1448
BstDSI	CCRYGG	2 cut(s)	535, 1384
BstF5I	GGATG	4 cut(s)	449, 958, 1221, 1518
BstFNI	CGCG	2 cut(s)	316, 560
BstH2I	RGCGCY	1 cut(s)	582
BstHHI	GCGC	2 cut(s)	560, 581
BstMAI	GTCTC	2 cut(s)	1629, 1725
BstMCI	CGRYCG	1 cut(s)	58
BstNI	CCWGG	5 cut(s)	33, 919, 939, 1544, 1812
BstNSI	RCATGY	3 cut(s)	1428, 1837, 1848
BstSFI	CTRYAG	2 cut(s)	688, 944
BstSLI	GKGCMC	2 cut(s)	258, 1384
BstUI	CGCG	2 cut(s)	316, 560
BstV2I	GAAGAC	2 cut(s)	926, 1539
BstX2I	RGATCY	3 cut(s)	344, 652, 847
BstYI	RGATCY	3 cut(s)	344, 652, 847
BsuRI	GGCC	8 cut(s)	86, 256, 534, 566, 752, 1250, 1547, 1819
BtgI	CCRYGG	2 cut(s)	535, 1384
BtrI	CACGTC	1 cut(s)	1016
BtsCI	GGATG	4 cut(s)	449, 958, 1221, 1518
BtsI	GCAGTG	1 cut(s)	165
BtsIMutI	CAGTG	3 cut(s)	71, 165, 1416
BveI	ACCTGC	1 cut(s)	895
Cac8I	GCNNGC	8 cut(s)	9, 122, 158, 162, 278, 1426, 1495, 1607
CfoI	GCGC	2 cut(s)	560, 581
Cfr10I	RCCGGY	1 cut(s)	791
Cfr13I	GGNCC	6 cut(s)	243, 254, 255, 489, 1249, 1546
CseI	GACGC	3 cut(s)	25, 1329, 1853
CsiI	ACCWGGT	1 cut(s)	1810
Csp6I	GTAC	2 cut(s)	1005, 1872
CspAI	ACCGGT	1 cut(s)	791
CviAII	CATG	6 cut(s)	1425, 1697, 1739, 1834, 1845, 1851
CviQI	GTAC	2 cut(s)	1005, 1872
DdeI	CTNAG	7 cut(s)	74, 893, 960, 1203, 1299, 1429, 1448
DinI	GGCGCC	1 cut(s)	580
DraIII	CACNNNGTG	1 cut(s)	1019
DrdI	GACNNNNNNGTC	1 cut(s)	1643
DseDI	GACNNNNNNGTC	1 cut(s)	1643
EaeI	YGGCCR	3 cut(s)	532, 564, 750
Eam1104I	CTCTTC	7 cut(s)	233, 626, 654, 662, 688, 825, 1403
EarI	CTCTTC	7 cut(s)	233, 626, 654, 662, 688, 825, 1403
EciI	GGCGGA	3 cut(s)	349, 385, 630
Ecl136II	GAGCTC	5 cut(s)	280, 390, 597, 866, 1376
Eco147I	AGGCCT	1 cut(s)	1819
Eco24I	GRGCYC	9 cut(s)	122, 162, 258, 282, 392, 515, 599, 868, 1378
Eco47I	GGWCC	2 cut(s)	243, 489
Eco53kI	GAGCTC	5 cut(s)	280, 390, 597, 866, 1376
Eco57I	CTGAAG	2 cut(s)	1245, 1440
Eco88I	CYCGRG	1 cut(s)	379
EcoICRI	GAGCTC	5 cut(s)	280, 390, 597, 866, 1376
EcoO109I	RGGNCCY	2 cut(s)	254, 1546
EcoRII	CCWGG	5 cut(s)	31, 917, 937, 1542, 1810
EcoT38I	GRGCYC	9 cut(s)	122, 162, 258, 282, 392, 515, 599, 868, 1378
EgeI	GGCGCC	1 cut(s)	580
EheI	GGCGCC	1 cut(s)	580
FaeI	CATG	6 cut(s)	1428, 1700, 1742, 1837, 1848, 1854
FalI	AAGNNNNNCTT	4 cut(s)	83, 115, 1566, 1598
FaqI	GGGAC	2 cut(s)	288, 532
FatI	CATG	6 cut(s)	1424, 1696, 1738, 1833, 1844, 1850
FauI	CCCGC	3 cut(s)	149, 463, 543
FauNDI	CATATG	1 cut(s)	443
FblI	GTMKAC	1 cut(s)	39
FokI	GGATG	4 cut(s)	436, 965, 1228, 1525
FriOI	GRGCYC	9 cut(s)	122, 162, 258, 282, 392, 515, 599, 868, 1378
FspBI	CTAG	3 cut(s)	797, 1331, 1610
GlaI	GCGC	2 cut(s)	559, 580
GsaI	CCCAGC	3 cut(s)	678, 809, 1093
GsuI	CTGGAG	5 cut(s)	169, 274, 478, 583, 1092
HaeII	RGCGCY	1 cut(s)	582
HaeIII	GGCC	8 cut(s)	86, 256, 534, 566, 752, 1250, 1547, 1819
HgaI	GACGC	3 cut(s)	25, 1329, 1853
HhaI	GCGC	2 cut(s)	560, 581
Hin1I	GRCGYC	2 cut(s)	36, 579
Hin1II	CATG	6 cut(s)	1428, 1700, 1742, 1837, 1848, 1854
Hin6I	GCGC	2 cut(s)	558, 579
HinP1I	GCGC	2 cut(s)	558, 579
HincII	GTYRAC	1 cut(s)	40
HindII	GTYRAC	1 cut(s)	40
HindIII	AAGCTT	1 cut(s)	1505
HinfI	GANTC	7 cut(s)	41, 68, 142, 484, 1055, 1148, 1685
HphI	GGTGA	7 cut(s)	604, 676, 829, 860, 1381, 1451, 1769
Hpy166II	GTNNAC	5 cut(s)	40, 403, 1416, 1808, 1856
Hpy188III	TCNNGA	7 cut(s)	195, 495, 600, 656, 1648, 1664, 1781
Hpy8I	GTNNAC	5 cut(s)	40, 403, 1416, 1808, 1856
Hpy99I	CGWCG	5 cut(s)	41, 412, 506, 1020, 1345
HpyAV	CCTTC	5 cut(s)	1266, 1470, 1581, 1592, 1830
HpyCH4III	ACNGT	2 cut(s)	875, 1860
HpyCH4IV	ACGT	2 cut(s)	504, 1015
HpyF3I	CTNAG	7 cut(s)	74, 893, 960, 1203, 1299, 1429, 1448
HpySE526I	ACGT	2 cut(s)	504, 1015
Hsp92I	GRCGYC	2 cut(s)	36, 579
Hsp92II	CATG	6 cut(s)	1428, 1700, 1742, 1837, 1848, 1854
HspAI	GCGC	2 cut(s)	558, 579
KasI	GGCGCC	1 cut(s)	578
Kpn2I	TCCGGA	2 cut(s)	194, 655
LweI	GCATC	8 cut(s)	934, 943, 1000, 1000, 1132, 1206, 1604, 1615
MabI	ACCWGGT	1 cut(s)	1810
MaeI	CTAG	3 cut(s)	797, 1331, 1610
MaeII	ACGT	2 cut(s)	504, 1015
MaeIII	GTNAC	5 cut(s)	65, 335, 963, 1288, 1840
MbiI	CCGCTC	3 cut(s)	153, 1109, 1786
MfeI	CAATTG	1 cut(s)	735
MflI	RGATCY	3 cut(s)	344, 652, 847
Mly113I	GGCGCC	1 cut(s)	579
MlyI	GAGTC	4 cut(s)	35, 62, 136, 1049
MmeI	TCCRAC	2 cut(s)	191, 825
MroI	TCCGGA	2 cut(s)	194, 655
MseI	TTAA	5 cut(s)	231, 371, 996, 1503, 1557
MslI	CAYNNNNRTG	1 cut(s)	1849
MspA1I	CMGCKG	1 cut(s)	136
MunI	CAATTG	1 cut(s)	735
Mva1269I	GAATGC	3 cut(s)	919, 1288, 1522
MvaI	CCWGG	5 cut(s)	33, 919, 939, 1544, 1812
MvnI	CGCG	2 cut(s)	316, 560
NarI	GGCGCC	1 cut(s)	579
NciI	CCSGG	7 cut(s)	13, 227, 333, 436, 454, 517, 776
NdeI	CATATG	1 cut(s)	443
NlaIII	CATG	6 cut(s)	1428, 1700, 1742, 1837, 1848, 1854
NmeAIII	GCCGAG	1 cut(s)	438
NmuCI	GTSAC	3 cut(s)	65, 335, 1840
NspI	RCATGY	3 cut(s)	1428, 1837, 1848
NspV	TTCGAA	1 cut(s)	1585
PaeI	GCATGC	1 cut(s)	1428
PaqCI	CACCTGC	1 cut(s)	895
PceI	AGGCCT	1 cut(s)	1819
PciI	ACATGT	1 cut(s)	1844
PcsI	WCGNNNNNNNCGW	2 cut(s)	416, 582
PctI	GAATGC	3 cut(s)	919, 1288, 1522
PfeI	GAWTC	3 cut(s)	484, 1148, 1685
PflMI	CCANNNNNTGG	1 cut(s)	877
PfoI	TCCNGGA	2 cut(s)	452, 515
PinAI	ACCGGT	1 cut(s)	791
Ple19I	CGATCG	1 cut(s)	58
PleI	GAGTC	4 cut(s)	35, 62, 136, 1049
PluTI	GGCGCC	1 cut(s)	582
PpsI	GAGTC	4 cut(s)	35, 62, 136, 1049
PscI	ACATGT	1 cut(s)	1844
Psp124BI	GAGCTC	5 cut(s)	282, 392, 599, 868, 1378
Psp6I	CCWGG	5 cut(s)	31, 917, 937, 1542, 1810
PspFI	CCCAGC	3 cut(s)	674, 805, 1089
PspGI	CCWGG	5 cut(s)	31, 917, 937, 1542, 1810
PspOMI	GGGCCC	1 cut(s)	254
PspPI	GGNCC	6 cut(s)	243, 254, 255, 489, 1249, 1546
PstI	CTGCAG	1 cut(s)	948
PsuI	RGATCY	3 cut(s)	344, 652, 847
PvuI	CGATCG	1 cut(s)	58
RsaI	GTAC	2 cut(s)	1006, 1873
RsaNI	GTAC	2 cut(s)	1005, 1872
RseI	CAYNNNNRTG	1 cut(s)	1849
SacI	GAGCTC	5 cut(s)	282, 392, 599, 868, 1378
SalI	GTCGAC	1 cut(s)	38
SaqAI	TTAA	5 cut(s)	231, 371, 996, 1503, 1557
Sau96I	GGNCC	6 cut(s)	243, 254, 255, 489, 1249, 1546
SchI	GAGTC	4 cut(s)	35, 62, 136, 1049
SexAI	ACCWGGT	1 cut(s)	1810
SfaNI	GCATC	8 cut(s)	934, 943, 1000, 1000, 1132, 1206, 1604, 1615
SfcI	CTRYAG	2 cut(s)	688, 944
SfoI	GGCGCC	1 cut(s)	580
SfuI	TTCGAA	1 cut(s)	1585
SinI	GGWCC	2 cut(s)	243, 489
SmiMI	CAYNNNNRTG	1 cut(s)	1849
SmlI	CTYRAG	4 cut(s)	464, 1648, 1701, 1781
SmoI	CTYRAG	4 cut(s)	464, 1648, 1701, 1781
SphI	GCATGC	1 cut(s)	1428
SseBI	AGGCCT	1 cut(s)	1819
SspDI	GGCGCC	1 cut(s)	578
SspI	AATATT	1 cut(s)	1773
SspMI	CTAG	3 cut(s)	797, 1331, 1610
SstI	GAGCTC	5 cut(s)	282, 392, 599, 868, 1378
StuI	AGGCCT	1 cut(s)	1819
TaaI	ACNGT	2 cut(s)	875, 1860
TaiI	ACGT	2 cut(s)	507, 1018
TaqI	TCGA	5 cut(s)	39, 111, 419, 1585, 1623
TatI	WGTACW	2 cut(s)	1004, 1871
TfiI	GAWTC	3 cut(s)	484, 1148, 1685
Tru1I	TTAA	5 cut(s)	231, 371, 996, 1503, 1557
Tru9I	TTAA	5 cut(s)	231, 371, 996, 1503, 1557
TscAI	CASTG	3 cut(s)	78, 172, 1423
TseFI	GTSAC	3 cut(s)	65, 335, 1840
Tsp45I	GTSAC	3 cut(s)	65, 335, 1840
TspDTI	ATGAA	5 cut(s)	1685, 1689, 1760, 1812, 1839
TspGWI	ACGGA	2 cut(s)	53, 982
TspRI	CASTG	3 cut(s)	78, 172, 1423
Van91I	CCANNNNNTGG	1 cut(s)	877
VpaK11BI	GGWCC	2 cut(s)	243, 489
XapI	RAATTY	1 cut(s)	1172
XceI	RCATGY	3 cut(s)	1428, 1837, 1848
XmiI	GTMKAC	1 cut(s)	39
XspI	CTAG	3 cut(s)	797, 1331, 1610

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.