Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0006030

Physical Location & Seq

Genomic Coordinates Reverse (-)

24944969 .. 24949507

Gene Structure 4539 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG240100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1968 bp

ATGTCGCACGCCGGGAAGCCCATTTCGGAGCCAGGCGTCGACTCCTCTCTCTCCGATCGCCTCCGTGACTCACTGAGTTGCGAGGCCAACAAGCCCGACTTCCGAGAACTCGATCTGGGCTCGCCCGTTTCGCCGCTGCGGACTCGCCAGAGCGGTGGGCTCGCCACTGCCACCAGCAGCAGCTCCAGTTCGTCCGGATCGGTGTCGGGTCGGAATGGAACCAACCCGGTTAATGCGAAGAGGTCCGGTTCGGGGCCCAACAACAACCACTCCGGCGAGCTCTCCGGCTCCAGCGAGAGCAGTCCCACAAATACCCGGAATAGCTCCAAACCGGGTCATACGAGATCCAATTCCGGCTCCGCCCACCCGTTAATTTACTCGGGTCAGAGCTCCTCCGCCGTGAACTCGTCGCCGAGATCGAATGTTCTGCCCGCCGGGAACATATGCCCATCCGGGAAAATACTCAAGGCGGGTATGGTTCCGAATCGGACCTCCAGAACCGACGTTCTGGGCTCCGGGACGGGCTATTACGGCCACGGGAGCATAATGCGGGGCGGCGCGGCGGCCAAGAGTGTCGGCGCCACCGAGGCGGTGAGCTCCAGAACAAGTGGCGGCGGCGGCGGAGGAGAGTTGGGGAAGAGAGGAATGGGGAGTGTGGATCCGGAAGAGGTGAAGAGAGCTGGGAATGAGCACTACAGAAGAGGCAATTTTGCAGAGGCTTTGAGCTTGTATGATCGGGCAATTGCTTTGGCTCCGGCCAATGCAGCTTACCGGAGCAACCGGGCTGCGGCATTGACCGGTCTAGGGCGGCTGGGGGAGGCGGTGAGGGAGTGTGAGGAGGCTGTGAAGTTGGATCCCAATTATGGCAGAGCTCACCACCGTTTGGGTTCTTTGTTTCTTAGGTTAGGGCAGGTGGAGAATGCCAGGAGGCATCTTTGTCTTCCAGGGCTGCAGCCGGATGCGGCTGAGTTACGGAAATTAGAGGTAGTAGAGAAGCATCTTAAAAAATGTACAGATGCACGTCGTGTAGGAGATTGGAAAAGTGTATTGAGGGAAAATGACTCTGCTATTGCTGCTGGAGCTGACTTTTCTCCCCAGCTCTCTATGTGTAGAGCGGAAGCACATTTGAAGCTCCACCAAATTGATGATGCTGAATCAGTCCTATCAAATATACCCAAATTTGACACATATACCAACTCCTCACAATCTAAGTTCTTTGGGATGCTTTCTGAAGCATATACTTACTTTGTCTTGGCCCAAATTGAGATGGCATTTGGAAGGTTTGAGAATGCAGTTACTTCTGCTGAGAAAGCTGGAAAGATTGATCCCCGAAACCTAGAAGTTGCGTCGCTGCTTCAAAATGTGCGAATGGTGGTGAGAGCTCGTGCCCGTGGCAATGATCTCTTCAAGTCTGAAAGGTTCACCGAAGCGTGCTTAGCTTATGGTGATGGTCTGAGGCTTGATCCTTCAAACTCTGTTCTATATTGCAACAGAGCAGCTTGCTGGTTTAAGCTTGGGATGTGGGAGCATTCCATTGAAGACTGCAACCAGGCCCTATGTATTAAGCCGAATTACACAAAAGCTCTTCTTCGAAGGGCTGCATCAAACAGCAAGCTAGAAAGATGGGTCGATGCTGTTAGAGACTATGAGATCTTGAGGAGGGAGCTTCCTGATGACAATGAAGTTGCTGAATCATTGTTTCATGCTCAAGTTGCATTGAAAAAGTCTCGTGGGGAAGAAGTGCATAATATGAAGTTTGGGGGTGAAGTAGAAGAAATATTGGGTCTTGAGCAGTTCAGAGCTGCAATATGTTTACCAGGTGTCTCCGTGGTCCATTTCAAAGCAGCATCTAATTTGCAATGCAAGCAAATGTCACCTTTCGTGGACACGCTCTGTGGCCGCTACCCATCCATAAATTTCCTCAAGGTAAGTTACAGACACTTGCATCGTATCACTTTAAATCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0006950 GO:0006970 GO:0008150 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0010033 GO:0010646 GO:0010647 GO:0023051 GO:0023056 GO:0033993 GO:0042221 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0065007 GO:0097305 GO:1901419 GO:1901421 GO:1901700 GO:1905957 GO:1905959

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_1 TPR_11 TPR_16 TPR_19 TPR_2 TPR_8 Thioredoxin

Protein Analysis

655

Amino Acids

70.8

Weight (kDa)

9.15

Isoelectric Point (pI)

47.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_16	PF13432	227 - 287	7.3e-08	Tetratricopeptide repeat
TPR_11	PF13414	228 - 269	7e-06	TPR repeat
TPR_1	PF00515	494 - 525	1.1e-06	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006030)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53300
fragaria_vesca	FvH4_3g18510 FvH4_3g18510
malus_domestica	MD03G1241500.v1.1 MD11G1260800.v1.1 MD15G1393600.v1.1
prunus_persica	Prupe.4G167400_v2.0.a1 Prupe.4G167400_v2.0.a1 Prupe.4G167400_v2.0.a1
pyrus_communis	pycom03g18830 pycom11g23020
rosa_chinensis	RchiOBHm_Chr5g0031271
rosa_laevigata	RLG00000033297
rosa_multiflora	Rmu_co8169312.1_g000001 Rmu_sc0006236.1_g000002 Rmu_sc0010698.1_g000009 Rmu_sc0027117.1_g000001
rosa_roxburghii	Rroxscaffold_1G00049020
rosa_rugosa	Rorug05G0123400
rosa_samantha	Rh5AG216900 Rh5BG216400 Rh5BG505500 Rh5CG240100 Rh5CG529200 Rh5DG221600 Rh7DG001600
rosa_wichuraiana	Rw5G019840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	901
Acc36I	ACCTGC	1 cut(s)	901
AccB1I	GGYRCC	1 cut(s)	578
AccB7I	CCANNNNNTGG	1 cut(s)	883
AccBSI	CCGCTC	2 cut(s)	153, 1115
AccI	GTMKAC	1 cut(s)	39
AccII	CGCG	1 cut(s)	560
AccIII	TCCGGA	2 cut(s)	194, 661
AclWI	GGATC	8 cut(s)	205, 339, 653, 666, 848, 861, 1319, 1457
AcoI	YGGCCR	4 cut(s)	532, 564, 756, 1897
AcsI	RAATTY	2 cut(s)	1178, 1915
AcuI	CTGAAG	1 cut(s)	1251
AcyI	GRCGYC	2 cut(s)	36, 579
AdeI	CACNNNGTG	1 cut(s)	1025
AfaI	GTAC	1 cut(s)	1012
AfiI	CCNNNNNNNGG	5 cut(s)	252, 787, 804, 863, 883
AgeI	ACCGGT	1 cut(s)	797
AgsI	TTSAA	7 cut(s)	1129, 1358, 1408, 1470, 1538, 1720, 1840
AjiI	CACGTC	1 cut(s)	1022
AjnI	CCWGG	5 cut(s)	31, 923, 943, 1548, 1816
Alw21I	GWGCWC	6 cut(s)	282, 392, 599, 693, 874, 1384
Alw26I	GTCTC	3 cut(s)	1635, 1731, 1828
AlwI	GGATC	8 cut(s)	205, 339, 653, 666, 848, 861, 1319, 1457
Ama87I	CYCGRG	1 cut(s)	379
Aor13HI	TCCGGA	2 cut(s)	194, 661
AoxI	GGCC	8 cut(s)	84, 254, 532, 564, 756, 1254, 1551, 1897
ApaI	GGGCCC	1 cut(s)	258
ApoI	RAATTY	2 cut(s)	1178, 1915
AsiGI	ACCGGT	1 cut(s)	797
AspLEI	GCGC	2 cut(s)	560, 581
AspS9I	GGNCC	7 cut(s)	243, 254, 255, 489, 1255, 1552, 1831
AsuC2I	CCSGG	8 cut(s)	13, 227, 316, 333, 436, 454, 517, 782
AsuHPI	GGTGA	9 cut(s)	604, 682, 835, 866, 1387, 1414, 1457, 1775, 1866
AsuII	TTCGAA	1 cut(s)	1591
AvaI	CYCGRG	1 cut(s)	379
AvaII	GGWCC	3 cut(s)	243, 489, 1831
BaeGI	GKGCMC	2 cut(s)	258, 1390
BamHI	GGATCC	2 cut(s)	658, 853
BanI	GGYRCC	1 cut(s)	578
BanII	GRGCYC	9 cut(s)	122, 162, 258, 282, 392, 515, 599, 874, 1384
BauI	CACGAG	2 cut(s)	1383, 1728
BbsI	GAAGAC	2 cut(s)	932, 1545
Bbv12I	GWGCWC	6 cut(s)	282, 392, 599, 693, 874, 1384
BccI	CCATC	5 cut(s)	457, 1261, 1442, 1617, 1915
BceAI	ACGGC	2 cut(s)	383, 547
BcgI	CGANNNNNNTGC	2 cut(s)	409, 443
BciT130I	CCWGG	5 cut(s)	33, 925, 945, 1550, 1818
BcnI	CCSGG	8 cut(s)	13, 227, 316, 333, 436, 454, 517, 782
BcoDI	GTCTC	3 cut(s)	1635, 1731, 1828
BfaI	CTAG	3 cut(s)	803, 1337, 1616
BfmI	CTRYAG	2 cut(s)	694, 950
BfoI	RGCGCY	1 cut(s)	582
BfuAI	ACCTGC	1 cut(s)	901
BglI	GCCNNNNNGGC	1 cut(s)	587
BglII	AGATCT	1 cut(s)	1650
BlpI	GCTNAGC	1 cut(s)	1435
Bme18I	GGWCC	3 cut(s)	243, 489, 1831
BmeT110I	CYCGRG	1 cut(s)	379
BmgBI	CACGTC	1 cut(s)	1022
BmgT120I	GGNCC	7 cut(s)	243, 254, 255, 489, 1255, 1552, 1831
BpiI	GAAGAC	2 cut(s)	932, 1545
BpmI	CTGGAG	5 cut(s)	169, 274, 478, 583, 1098
Bpu1102I	GCTNAGC	1 cut(s)	1435
Bpu14I	TTCGAA	1 cut(s)	1591
BpuEI	CTTGAG	5 cut(s)	449, 1675, 1692, 1808, 1907
BpuMI	CCSGG	8 cut(s)	13, 227, 316, 333, 436, 454, 517, 782
BsaHI	GRCGYC	2 cut(s)	36, 579
BsaJI	CCNNGG	5 cut(s)	535, 585, 944, 1390, 1827
BsaWI	WCCGGW	5 cut(s)	194, 245, 661, 771, 797
BsaXI	ACNNNNNCTCC	2 cut(s)	254, 284
Bsc4I	CCNNNNNNNGG	5 cut(s)	252, 787, 804, 863, 883
Bse118I	RCCGGY	1 cut(s)	797
Bse1I	ACTGG	1 cut(s)	186
Bse3DI	GCAATG	2 cut(s)	1402, 1865
BseAI	TCCGGA	2 cut(s)	194, 661
BseBI	CCWGG	5 cut(s)	33, 925, 945, 1550, 1818
BseDI	CCNNGG	5 cut(s)	535, 585, 944, 1390, 1827
BseGI	GGATG	5 cut(s)	449, 964, 1227, 1524, 1907
BseLI	CCNNNNNNNGG	5 cut(s)	252, 787, 804, 863, 883
BseMI	GCAATG	2 cut(s)	1402, 1865
BseMII	CTCAG	4 cut(s)	65, 957, 1296, 1445
BseNI	ACTGG	1 cut(s)	186
BseRI	GAGGAG	6 cut(s)	34, 382, 639, 851, 1189, 1672
BseSI	GKGCMC	2 cut(s)	258, 1390
BseYI	CCCAGC	3 cut(s)	680, 811, 1095
Bsh1236I	CGCG	1 cut(s)	560
Bsh1285I	CGRYCG	1 cut(s)	58
BshFI	GGCC	8 cut(s)	86, 256, 534, 566, 758, 1256, 1553, 1899
BshNI	GGYRCC	1 cut(s)	578
BshTI	ACCGGT	1 cut(s)	797
BsiEI	CGRYCG	1 cut(s)	58
BsiHKAI	GWGCWC	6 cut(s)	282, 392, 599, 693, 874, 1384
BsiHKCI	CYCGRG	1 cut(s)	379
BslFI	GGGAC	2 cut(s)	288, 532
BslI	CCNNNNNNNGG	5 cut(s)	252, 787, 804, 863, 883
BsmAI	GTCTC	3 cut(s)	1635, 1731, 1828
BsmFI	GGGAC	2 cut(s)	288, 532
BsmI	GAATGC	3 cut(s)	925, 1294, 1528
BsnI	GGCC	8 cut(s)	86, 256, 534, 566, 758, 1256, 1553, 1899
BsoBI	CYCGRG	1 cut(s)	379
Bsp119I	TTCGAA	1 cut(s)	1591
Bsp120I	GGGCCC	1 cut(s)	254
Bsp13I	TCCGGA	2 cut(s)	194, 661
Bsp1407I	TGTACA	1 cut(s)	1010
Bsp1720I	GCTNAGC	1 cut(s)	1435
BspANI	GGCC	8 cut(s)	86, 256, 534, 566, 758, 1256, 1553, 1899
BspCNI	CTCAG	4 cut(s)	66, 958, 1297, 1446
BspEI	TCCGGA	2 cut(s)	194, 661
BspFNI	CGCG	1 cut(s)	560
BspMAI	CTGCAG	1 cut(s)	954
BspMI	ACCTGC	1 cut(s)	901
BspPI	GGATC	8 cut(s)	205, 339, 653, 666, 848, 861, 1319, 1457
BspQI	GCTCTTC	1 cut(s)	1590
BspT104I	TTCGAA	1 cut(s)	1591
BspT107I	GGYRCC	1 cut(s)	578
BsrBI	CCGCTC	2 cut(s)	153, 1115
BsrDI	GCAATG	2 cut(s)	1402, 1865
BsrFI	RCCGGY	1 cut(s)	797
BsrGI	TGTACA	1 cut(s)	1010
BsrI	ACTGG	1 cut(s)	186
BssAI	RCCGGY	1 cut(s)	797
BssECI	CCNNGG	5 cut(s)	535, 585, 944, 1390, 1827
BssNI	GRCGYC	2 cut(s)	36, 579
BssSI	CACGAG	2 cut(s)	1383, 1728
Bst2BI	CACGAG	2 cut(s)	1383, 1728
Bst2UI	CCWGG	5 cut(s)	33, 925, 945, 1550, 1818
Bst4CI	ACNGT	1 cut(s)	881
Bst6I	CTCTTC	7 cut(s)	233, 632, 660, 668, 694, 1409, 1590
BstACI	GRCGYC	2 cut(s)	36, 579
BstAUI	TGTACA	1 cut(s)	1010
BstBI	TTCGAA	1 cut(s)	1591
BstC8I	GCNNGC	9 cut(s)	9, 122, 162, 278, 432, 1432, 1501, 1613, 1865
BstDEI	CTNAG	7 cut(s)	74, 899, 966, 1209, 1305, 1435, 1454
BstDSI	CCRYGG	3 cut(s)	535, 1390, 1827
BstF5I	GGATG	5 cut(s)	449, 964, 1227, 1524, 1907
BstFNI	CGCG	1 cut(s)	560
BstH2I	RGCGCY	1 cut(s)	582
BstHHI	GCGC	2 cut(s)	560, 581
BstMAI	GTCTC	3 cut(s)	1635, 1731, 1828
BstMCI	CGRYCG	1 cut(s)	58
BstNI	CCWGG	5 cut(s)	33, 925, 945, 1550, 1818
BstSFI	CTRYAG	2 cut(s)	694, 950
BstSLI	GKGCMC	2 cut(s)	258, 1390
BstUI	CGCG	1 cut(s)	560
BstV2I	GAAGAC	2 cut(s)	932, 1545
BstX2I	RGATCY	4 cut(s)	344, 658, 853, 1650
BstXI	CCANNNNNNTGG	1 cut(s)	155
BstYI	RGATCY	4 cut(s)	344, 658, 853, 1650
BsuRI	GGCC	8 cut(s)	86, 256, 534, 566, 758, 1256, 1553, 1899
BtgI	CCRYGG	3 cut(s)	535, 1390, 1827
BtrI	CACGTC	1 cut(s)	1022
BtsCI	GGATG	5 cut(s)	449, 964, 1227, 1524, 1907
BtsI	GCAGTG	1 cut(s)	165
BtsIMutI	CAGTG	2 cut(s)	71, 165
BveI	ACCTGC	1 cut(s)	901
Cac8I	GCNNGC	9 cut(s)	9, 122, 162, 278, 432, 1432, 1501, 1613, 1865
CfoI	GCGC	2 cut(s)	560, 581
Cfr10I	RCCGGY	1 cut(s)	797
Cfr13I	GGNCC	7 cut(s)	243, 254, 255, 489, 1255, 1552, 1831
CseI	GACGC	2 cut(s)	25, 1335
CsiI	ACCWGGT	1 cut(s)	1816
Csp6I	GTAC	1 cut(s)	1011
CspAI	ACCGGT	1 cut(s)	797
CviAII	CATG	1 cut(s)	1703
CviQI	GTAC	1 cut(s)	1011
DdeI	CTNAG	7 cut(s)	74, 899, 966, 1209, 1305, 1435, 1454
DinI	GGCGCC	1 cut(s)	580
DraI	TTTAAA	1 cut(s)	1959
DraIII	CACNNNGTG	1 cut(s)	1025
EaeI	YGGCCR	4 cut(s)	532, 564, 756, 1897
Eam1104I	CTCTTC	7 cut(s)	233, 632, 660, 668, 694, 1409, 1590
EarI	CTCTTC	7 cut(s)	233, 632, 660, 668, 694, 1409, 1590
EciI	GGCGGA	3 cut(s)	349, 385, 636
Ecl136II	GAGCTC	5 cut(s)	280, 390, 597, 872, 1382
Eco24I	GRGCYC	9 cut(s)	122, 162, 258, 282, 392, 515, 599, 874, 1384
Eco47I	GGWCC	3 cut(s)	243, 489, 1831
Eco53kI	GAGCTC	5 cut(s)	280, 390, 597, 872, 1382
Eco57I	CTGAAG	1 cut(s)	1251
Eco88I	CYCGRG	1 cut(s)	379
EcoICRI	GAGCTC	5 cut(s)	280, 390, 597, 872, 1382
EcoO109I	RGGNCCY	2 cut(s)	254, 1552
EcoRII	CCWGG	5 cut(s)	31, 923, 943, 1548, 1816
EcoT38I	GRGCYC	9 cut(s)	122, 162, 258, 282, 392, 515, 599, 874, 1384
EgeI	GGCGCC	1 cut(s)	580
EheI	GGCGCC	1 cut(s)	580
FaeI	CATG	1 cut(s)	1706
FalI	AAGNNNNNCTT	4 cut(s)	83, 115, 1572, 1604
FaqI	GGGAC	2 cut(s)	288, 532
FatI	CATG	1 cut(s)	1702
FauI	CCCGC	3 cut(s)	439, 463, 543
FauNDI	CATATG	1 cut(s)	443
FblI	GTMKAC	1 cut(s)	39
FokI	GGATG	5 cut(s)	436, 971, 1234, 1531, 1894
FriOI	GRGCYC	9 cut(s)	122, 162, 258, 282, 392, 515, 599, 874, 1384
FspBI	CTAG	3 cut(s)	803, 1337, 1616
GlaI	GCGC	2 cut(s)	559, 580
GsaI	CCCAGC	3 cut(s)	684, 815, 1099
GsuI	CTGGAG	5 cut(s)	169, 274, 478, 583, 1098
HaeII	RGCGCY	1 cut(s)	582
HaeIII	GGCC	8 cut(s)	86, 256, 534, 566, 758, 1256, 1553, 1899
HgaI	GACGC	2 cut(s)	25, 1335
HhaI	GCGC	2 cut(s)	560, 581
Hin1I	GRCGYC	2 cut(s)	36, 579
Hin1II	CATG	1 cut(s)	1706
Hin6I	GCGC	2 cut(s)	558, 579
HinP1I	GCGC	2 cut(s)	558, 579
HincII	GTYRAC	1 cut(s)	40
HindII	GTYRAC	1 cut(s)	40
HindIII	AAGCTT	1 cut(s)	1511
HinfI	GANTC	7 cut(s)	41, 68, 142, 484, 1061, 1154, 1691
HphI	GGTGA	9 cut(s)	604, 682, 835, 866, 1387, 1414, 1457, 1775, 1866
Hpy166II	GTNNAC	5 cut(s)	40, 403, 1422, 1814, 1885
Hpy188III	TCNNGA	7 cut(s)	195, 495, 600, 662, 1654, 1670, 1787
Hpy8I	GTNNAC	5 cut(s)	40, 403, 1422, 1814, 1885
Hpy99I	CGWCG	5 cut(s)	41, 412, 506, 1026, 1351
HpyAV	CCTTC	3 cut(s)	1272, 1476, 1587
HpyCH4III	ACNGT	1 cut(s)	881
HpyCH4IV	ACGT	2 cut(s)	504, 1021
HpyF3I	CTNAG	7 cut(s)	74, 899, 966, 1209, 1305, 1435, 1454
HpySE526I	ACGT	2 cut(s)	504, 1021
Hsp92I	GRCGYC	2 cut(s)	36, 579
Hsp92II	CATG	1 cut(s)	1706
HspAI	GCGC	2 cut(s)	558, 579
KasI	GGCGCC	1 cut(s)	578
Kpn2I	TCCGGA	2 cut(s)	194, 661
LguI	GCTCTTC	1 cut(s)	1590
MabI	ACCWGGT	1 cut(s)	1816
MaeI	CTAG	3 cut(s)	803, 1337, 1616
MaeII	ACGT	2 cut(s)	504, 1021
MaeIII	GTNAC	5 cut(s)	65, 969, 1294, 1872, 1931
MbiI	CCGCTC	2 cut(s)	153, 1115
MfeI	CAATTG	1 cut(s)	741
MflI	RGATCY	4 cut(s)	344, 658, 853, 1650
Mly113I	GGCGCC	1 cut(s)	579
MlyI	GAGTC	4 cut(s)	35, 62, 136, 1055
MmeI	TCCRAC	2 cut(s)	191, 831
MroI	TCCGGA	2 cut(s)	194, 661
MseI	TTAA	7 cut(s)	231, 371, 1002, 1509, 1563, 1958, 1966
MspA1I	CMGCKG	1 cut(s)	136
MunI	CAATTG	1 cut(s)	741
Mva1269I	GAATGC	3 cut(s)	925, 1294, 1528
MvaI	CCWGG	5 cut(s)	33, 925, 945, 1550, 1818
MvnI	CGCG	1 cut(s)	560
NarI	GGCGCC	1 cut(s)	579
NciI	CCSGG	8 cut(s)	13, 227, 316, 333, 436, 454, 517, 782
NdeI	CATATG	1 cut(s)	443
NlaIII	CATG	1 cut(s)	1706
NmeAIII	GCCGAG	1 cut(s)	438
NmuCI	GTSAC	2 cut(s)	65, 1872
NspV	TTCGAA	1 cut(s)	1591
PaqCI	CACCTGC	1 cut(s)	901
PciSI	GCTCTTC	1 cut(s)	1590
PcsI	WCGNNNNNNNCGW	2 cut(s)	416, 582
PctI	GAATGC	3 cut(s)	925, 1294, 1528
PfeI	GAWTC	3 cut(s)	484, 1154, 1691
PflMI	CCANNNNNTGG	1 cut(s)	883
PfoI	TCCNGGA	2 cut(s)	452, 515
PinAI	ACCGGT	1 cut(s)	797
Ple19I	CGATCG	1 cut(s)	58
PleI	GAGTC	4 cut(s)	35, 62, 136, 1055
PluTI	GGCGCC	1 cut(s)	582
PpsI	GAGTC	4 cut(s)	35, 62, 136, 1055
Psp124BI	GAGCTC	5 cut(s)	282, 392, 599, 874, 1384
Psp6I	CCWGG	5 cut(s)	31, 923, 943, 1548, 1816
PspFI	CCCAGC	3 cut(s)	680, 811, 1095
PspGI	CCWGG	5 cut(s)	31, 923, 943, 1548, 1816
PspOMI	GGGCCC	1 cut(s)	254
PspPI	GGNCC	7 cut(s)	243, 254, 255, 489, 1255, 1552, 1831
PstI	CTGCAG	1 cut(s)	954
PsuI	RGATCY	4 cut(s)	344, 658, 853, 1650
PvuI	CGATCG	1 cut(s)	58
RsaI	GTAC	1 cut(s)	1012
RsaNI	GTAC	1 cut(s)	1011
SacI	GAGCTC	5 cut(s)	282, 392, 599, 874, 1384
SalI	GTCGAC	1 cut(s)	38
SapI	GCTCTTC	1 cut(s)	1590
SaqAI	TTAA	7 cut(s)	231, 371, 1002, 1509, 1563, 1958, 1966
Sau96I	GGNCC	7 cut(s)	243, 254, 255, 489, 1255, 1552, 1831
SchI	GAGTC	4 cut(s)	35, 62, 136, 1055
SexAI	ACCWGGT	1 cut(s)	1816
SfcI	CTRYAG	2 cut(s)	694, 950
SfoI	GGCGCC	1 cut(s)	580
SfuI	TTCGAA	1 cut(s)	1591
SinI	GGWCC	3 cut(s)	243, 489, 1831
SmlI	CTYRAG	5 cut(s)	464, 1654, 1707, 1787, 1922
SmoI	CTYRAG	5 cut(s)	464, 1654, 1707, 1787, 1922
SspDI	GGCGCC	1 cut(s)	578
SspI	AATATT	1 cut(s)	1779
SspMI	CTAG	3 cut(s)	803, 1337, 1616
SstI	GAGCTC	5 cut(s)	282, 392, 599, 874, 1384
TaaI	ACNGT	1 cut(s)	881
TaiI	ACGT	2 cut(s)	507, 1024
TaqI	TCGA	5 cut(s)	39, 111, 419, 1591, 1629
TatI	WGTACW	1 cut(s)	1010
TfiI	GAWTC	3 cut(s)	484, 1154, 1691
Tru1I	TTAA	7 cut(s)	231, 371, 1002, 1509, 1563, 1958, 1966
Tru9I	TTAA	7 cut(s)	231, 371, 1002, 1509, 1563, 1958, 1966
TscAI	CASTG	2 cut(s)	78, 172
TseFI	GTSAC	2 cut(s)	65, 1872
Tsp45I	GTSAC	2 cut(s)	65, 1872
TspDTI	ATGAA	3 cut(s)	1691, 1695, 1766
TspGWI	ACGGA	3 cut(s)	53, 988, 1816
TspRI	CASTG	2 cut(s)	78, 172
Van91I	CCANNNNNTGG	1 cut(s)	883
VpaK11BI	GGWCC	3 cut(s)	243, 489, 1831
XapI	RAATTY	2 cut(s)	1178, 1915
XmiI	GTMKAC	1 cut(s)	39
XspI	CTAG	3 cut(s)	803, 1337, 1616

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.