TPR repeat-containing thioredoxin
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G53300 |
| fragaria_vesca | FvH4_3g18510 FvH4_3g18510 |
| malus_domestica | MD03G1241500.v1.1 MD11G1260800.v1.1 MD15G1393600.v1.1 |
| prunus_persica | Prupe.4G167400_v2.0.a1 Prupe.4G167400_v2.0.a1 Prupe.4G167400_v2.0.a1 |
| pyrus_communis | pycom03g18830 pycom11g23020 |
| rosa_chinensis | RchiOBHm_Chr5g0031271 |
| rosa_laevigata | RLG00000033297 |
| rosa_multiflora | Rmu_co8169312.1_g000001 Rmu_sc0006236.1_g000002 Rmu_sc0010698.1_g000009 Rmu_sc0027117.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00049020 |
| rosa_rugosa | Rorug05G0123400 |
| rosa_samantha | Rh5AG216900 Rh5BG216400 Rh5BG505500 Rh5CG240100 Rh5CG529200 Rh5DG221600 Rh7DG001600 |
| rosa_wichuraiana | Rw5G019840 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1743 |
| Acc65I | GGTACC | 1 cut(s) | 1899 |
| AccB1I | GGYRCC | 2 cut(s) | 933, 1899 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 886 |
| AccBSI | CCGCTC | 1 cut(s) | 1118 |
| AccII | CGCG | 1 cut(s) | 1728 |
| AccIII | TCCGGA | 1 cut(s) | 191 |
| AcoI | YGGCCR | 2 cut(s) | 759, 1894 |
| AcsI | RAATTY | 2 cut(s) | 337, 1912 |
| AcuI | CTGAAG | 2 cut(s) | 1248, 1443 |
| AdeI | CACNNNGTG | 1 cut(s) | 1892 |
| AfaI | GTAC | 6 cut(s) | 601, 698, 734, 1015, 1901, 1977 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 135, 715, 790, 807, 866, 886, 1030, 2014 |
| AgeI | ACCGGT | 1 cut(s) | 800 |
| AjnI | CCWGG | 5 cut(s) | 10, 926, 946, 1545, 1813 |
| Alw21I | GWGCWC | 3 cut(s) | 407, 500, 877 |
| Alw26I | GTCTC | 6 cut(s) | 161, 624, 759, 809, 1181, 1825 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1295, 1847 |
| Ama87I | CYCGRG | 4 cut(s) | 394, 738, 806, 1386 |
| Aor13HI | TCCGGA | 1 cut(s) | 191 |
| ApaI | GGGCCC | 1 cut(s) | 219 |
| ApeKI | GCWGC | 8 cut(s) | 227, 1298, 1340, 1348, 1493, 1595, 1799, 1841 |
| ApoI | RAATTY | 2 cut(s) | 337, 1912 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 139, 171 |
| AsiGI | ACCGGT | 1 cut(s) | 800 |
| Asp718I | GGTACC | 1 cut(s) | 1899 |
| AspLEI | GCGC | 1 cut(s) | 2028 |
| AspS9I | GGNCC | 9 cut(s) | 138, 215, 216, 237, 484, 563, 1252, 1549, 1828 |
| AsuC2I | CCSGG | 4 cut(s) | 334, 348, 566, 785 |
| AsuHPI | GGTGA | 6 cut(s) | 111, 607, 664, 685, 869, 1772 |
| AvaI | CYCGRG | 4 cut(s) | 394, 738, 806, 1386 |
| AvaII | GGWCC | 4 cut(s) | 138, 237, 484, 1828 |
| BaeGI | GKGCMC | 2 cut(s) | 219, 1387 |
| BamHI | GGATCC | 2 cut(s) | 661, 856 |
| BanI | GGYRCC | 2 cut(s) | 933, 1899 |
| BanII | GRGCYC | 5 cut(s) | 219, 407, 500, 877, 1381 |
| BbsI | GAAGAC | 1 cut(s) | 1542 |
| Bbv12I | GWGCWC | 3 cut(s) | 407, 500, 877 |
| BbvCI | CCTCAGC | 1 cut(s) | 1098 |
| BbvI | GCAGC | 8 cut(s) | 214, 1285, 1327, 1335, 1505, 1582, 1786, 1853 |
| BccI | CCATC | 4 cut(s) | 1258, 1439, 1614, 1912 |
| BceAI | ACGGC | 2 cut(s) | 809, 2019 |
| BciT130I | CCWGG | 5 cut(s) | 12, 928, 948, 1547, 1815 |
| BcnI | CCSGG | 4 cut(s) | 334, 348, 566, 785 |
| BcoDI | GTCTC | 6 cut(s) | 161, 624, 759, 809, 1181, 1825 |
| BfaI | CTAG | 2 cut(s) | 282, 2074 |
| BfmI | CTRYAG | 1 cut(s) | 1341 |
| BlpI | GCTNAGC | 1 cut(s) | 1432 |
| BmcAI | AGTACT | 1 cut(s) | 601 |
| Bme1390I | CCNGG | 9 cut(s) | 12, 334, 348, 566, 785, 928, 948, 1547, 1815 |
| Bme18I | GGWCC | 4 cut(s) | 138, 237, 484, 1828 |
| BmeT110I | CYCGRG | 4 cut(s) | 394, 738, 806, 1386 |
| BmgT120I | GGNCC | 9 cut(s) | 138, 215, 216, 237, 484, 563, 1252, 1549, 1828 |
| BmiI | GGNNCC | 8 cut(s) | 140, 217, 373, 486, 663, 858, 935, 1901 |
| BmrFI | CCNGG | 9 cut(s) | 12, 334, 348, 566, 785, 928, 948, 1547, 1815 |
| BmrI | ACTGGG | 1 cut(s) | 450 |
| BmsI | GCATC | 6 cut(s) | 16, 1009, 1054, 1141, 1209, 1618 |
| BmuI | ACTGGG | 1 cut(s) | 450 |
| BpiI | GAAGAC | 1 cut(s) | 1542 |
| BpmI | CTGGAG | 3 cut(s) | 166, 484, 1101 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1098 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1432 |
| BpuEI | CTTGAG | 4 cut(s) | 1672, 1689, 1805, 1904 |
| BpuMI | CCSGG | 4 cut(s) | 334, 348, 566, 785 |
| BsaI | GGTCTC | 3 cut(s) | 161, 809, 1181 |
| BsaJI | CCNNGG | 6 cut(s) | 11, 947, 1325, 1387, 1726, 1824 |
| BsaWI | WCCGGW | 4 cut(s) | 191, 492, 774, 800 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 245, 275, 482, 512 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 135, 715, 790, 807, 866, 886, 1030, 2014 |
| Bse118I | RCCGGY | 2 cut(s) | 800, 1896 |
| Bse1I | ACTGG | 2 cut(s) | 445, 625 |
| Bse3DI | GCAATG | 2 cut(s) | 1399, 1809 |
| BseAI | TCCGGA | 1 cut(s) | 191 |
| BseBI | CCWGG | 5 cut(s) | 12, 928, 948, 1547, 1815 |
| BseDI | CCNNGG | 6 cut(s) | 11, 947, 1325, 1387, 1726, 1824 |
| BseGI | GGATG | 4 cut(s) | 7, 1224, 1521, 1904 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 135, 715, 790, 807, 866, 886, 1030, 2014 |
| BseMI | GCAATG | 2 cut(s) | 1399, 1809 |
| BseMII | CTCAG | 8 cut(s) | 62, 216, 960, 1112, 1293, 1442, 1446, 2071 |
| BseNI | ACTGG | 2 cut(s) | 445, 625 |
| BseRI | GAGGAG | 2 cut(s) | 683, 1086 |
| BseSI | GKGCMC | 2 cut(s) | 219, 1387 |
| BseXI | GCAGC | 8 cut(s) | 214, 1285, 1327, 1335, 1505, 1582, 1786, 1853 |
| BseYI | CCCAGC | 4 cut(s) | 223, 683, 1310, 2030 |
| Bsh1236I | CGCG | 1 cut(s) | 1728 |
| Bsh1285I | CGRYCG | 1 cut(s) | 55 |
| BshNI | GGYRCC | 2 cut(s) | 933, 1899 |
| BshTI | ACCGGT | 1 cut(s) | 800 |
| BsiEI | CGRYCG | 1 cut(s) | 55 |
| BsiHKAI | GWGCWC | 3 cut(s) | 407, 500, 877 |
| BsiHKCI | CYCGRG | 4 cut(s) | 394, 738, 806, 1386 |
| BslFI | GGGAC | 2 cut(s) | 279, 470 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 135, 715, 790, 807, 866, 886, 1030, 2014 |
| BsmAI | GTCTC | 6 cut(s) | 161, 624, 759, 809, 1181, 1825 |
| BsmFI | GGGAC | 2 cut(s) | 279, 470 |
| BsmI | GAATGC | 1 cut(s) | 1291 |
| Bso31I | GGTCTC | 3 cut(s) | 161, 809, 1181 |
| BsoBI | CYCGRG | 4 cut(s) | 394, 738, 806, 1386 |
| Bsp120I | GGGCCC | 1 cut(s) | 215 |
| Bsp1286I | GDGCHC | 6 cut(s) | 219, 407, 500, 877, 1381, 1387 |
| Bsp13I | TCCGGA | 1 cut(s) | 191 |
| Bsp1407I | TGTACA | 1 cut(s) | 1013 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1432 |
| BspCNI | CTCAG | 8 cut(s) | 63, 215, 961, 1111, 1294, 1443, 1445, 2070 |
| BspEI | TCCGGA | 1 cut(s) | 191 |
| BspFNI | CGCG | 1 cut(s) | 1728 |
| BspLI | GGNNCC | 8 cut(s) | 140, 217, 373, 486, 663, 858, 935, 1901 |
| BspMAI | CTGCAG | 1 cut(s) | 1345 |
| BspT107I | GGYRCC | 2 cut(s) | 933, 1899 |
| BspTNI | GGTCTC | 3 cut(s) | 161, 809, 1181 |
| BsrBI | CCGCTC | 1 cut(s) | 1118 |
| BsrDI | GCAATG | 2 cut(s) | 1399, 1809 |
| BsrFI | RCCGGY | 2 cut(s) | 800, 1896 |
| BsrGI | TGTACA | 1 cut(s) | 1013 |
| BsrI | ACTGG | 2 cut(s) | 445, 625 |
| BssAI | RCCGGY | 2 cut(s) | 800, 1896 |
| BssECI | CCNNGG | 6 cut(s) | 11, 947, 1325, 1387, 1726, 1824 |
| Bst2UI | CCWGG | 5 cut(s) | 12, 928, 948, 1547, 1815 |
| Bst4CI | ACNGT | 3 cut(s) | 539, 604, 1238 |
| Bst6I | CTCTTC | 6 cut(s) | 138, 635, 671, 697, 834, 1406 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1295 |
| BstAUI | TGTACA | 1 cut(s) | 1013 |
| BstC8I | GCNNGC | 6 cut(s) | 269, 987, 1429, 1610, 1862, 1954 |
| BstDSI | CCRYGG | 2 cut(s) | 1726, 1824 |
| BstF5I | GGATG | 4 cut(s) | 7, 1224, 1521, 1904 |
| BstFNI | CGCG | 1 cut(s) | 1728 |
| BstHHI | GCGC | 1 cut(s) | 2028 |
| BstMAI | GTCTC | 6 cut(s) | 161, 624, 759, 809, 1181, 1825 |
| BstMCI | CGRYCG | 1 cut(s) | 55 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 767, 1073, 1082, 1295, 1307, 1433, 1805 |
| BstNI | CCWGG | 5 cut(s) | 12, 928, 948, 1547, 1815 |
| BstSCI | CCNGG | 9 cut(s) | 10, 332, 346, 564, 783, 926, 946, 1545, 1813 |
| BstSFI | CTRYAG | 1 cut(s) | 1341 |
| BstSLI | GKGCMC | 2 cut(s) | 219, 1387 |
| BstUI | CGCG | 1 cut(s) | 1728 |
| BstV1I | GCAGC | 8 cut(s) | 214, 1285, 1327, 1335, 1505, 1582, 1786, 1853 |
| BstV2I | GAAGAC | 1 cut(s) | 1542 |
| BstX2I | RGATCY | 4 cut(s) | 359, 661, 856, 961 |
| BstYI | RGATCY | 4 cut(s) | 359, 661, 856, 961 |
| BtgI | CCRYGG | 2 cut(s) | 1726, 1824 |
| BtsCI | GGATG | 4 cut(s) | 7, 1224, 1521, 1904 |
| BtsI | GCAGTG | 2 cut(s) | 162, 1350 |
| BtsIMutI | CAGTG | 6 cut(s) | 68, 162, 438, 1350, 1419, 1956 |
| Cac8I | GCNNGC | 6 cut(s) | 269, 987, 1429, 1610, 1862, 1954 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1295, 1847 |
| CfoI | GCGC | 1 cut(s) | 2028 |
| Cfr10I | RCCGGY | 2 cut(s) | 800, 1896 |
| Cfr13I | GGNCC | 9 cut(s) | 138, 215, 216, 237, 484, 563, 1252, 1549, 1828 |
| Cfr42I | CCGCGG | 1 cut(s) | 1729 |
| CseI | GACGC | 1 cut(s) | 301 |
| CsiI | ACCWGGT | 1 cut(s) | 1813 |
| Csp6I | GTAC | 6 cut(s) | 600, 697, 733, 1014, 1900, 1976 |
| CspAI | ACCGGT | 1 cut(s) | 800 |
| CviAII | CATG | 2 cut(s) | 1249, 1700 |
| CviQI | GTAC | 6 cut(s) | 600, 697, 733, 1014, 1900, 1976 |
| DraI | TTTAAA | 2 cut(s) | 1507, 1837 |
| DraIII | CACNNNGTG | 1 cut(s) | 1892 |
| EaeI | YGGCCR | 2 cut(s) | 759, 1894 |
| Eam1104I | CTCTTC | 6 cut(s) | 138, 635, 671, 697, 834, 1406 |
| EarI | CTCTTC | 6 cut(s) | 138, 635, 671, 697, 834, 1406 |
| EciI | GGCGGA | 3 cut(s) | 310, 408, 642 |
| Ecl136II | GAGCTC | 3 cut(s) | 405, 498, 875 |
| Eco147I | AGGCCT | 1 cut(s) | 36 |
| Eco24I | GRGCYC | 5 cut(s) | 219, 407, 500, 877, 1381 |
| Eco31I | GGTCTC | 3 cut(s) | 161, 809, 1181 |
| Eco47I | GGWCC | 4 cut(s) | 138, 237, 484, 1828 |
| Eco53kI | GAGCTC | 3 cut(s) | 405, 498, 875 |
| Eco57I | CTGAAG | 2 cut(s) | 1248, 1443 |
| Eco88I | CYCGRG | 4 cut(s) | 394, 738, 806, 1386 |
| EcoICRI | GAGCTC | 3 cut(s) | 405, 498, 875 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1549 |
| EcoRII | CCWGG | 5 cut(s) | 10, 926, 946, 1545, 1813 |
| EcoT38I | GRGCYC | 5 cut(s) | 219, 407, 500, 877, 1381 |
| FaeI | CATG | 2 cut(s) | 1252, 1703 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1569, 1601 |
| FaqI | GGGAC | 2 cut(s) | 279, 470 |
| FatI | CATG | 2 cut(s) | 1248, 1699 |
| FauI | CCCGC | 3 cut(s) | 549, 1721, 1733 |
| FauNDI | CATATG | 1 cut(s) | 449 |
| FokI | GGATG | 3 cut(s) | 1231, 1528, 1891 |
| FriOI | GRGCYC | 5 cut(s) | 219, 407, 500, 877, 1381 |
| FspBI | CTAG | 2 cut(s) | 282, 2074 |
| GlaI | GCGC | 1 cut(s) | 2027 |
| GsaI | CCCAGC | 4 cut(s) | 227, 687, 1314, 2034 |
| GsuI | CTGGAG | 3 cut(s) | 166, 484, 1101 |
| HgaI | GACGC | 1 cut(s) | 301 |
| HhaI | GCGC | 1 cut(s) | 2028 |
| Hin1II | CATG | 2 cut(s) | 1252, 1703 |
| Hin6I | GCGC | 1 cut(s) | 2026 |
| HinP1I | GCGC | 1 cut(s) | 2026 |
| HincII | GTYRAC | 1 cut(s) | 1927 |
| HindII | GTYRAC | 1 cut(s) | 1927 |
| HindIII | AAGCTT | 3 cut(s) | 1230, 1425, 1610 |
| HinfI | GANTC | 6 cut(s) | 41, 65, 242, 365, 1019, 1688 |
| HphI | GGTGA | 6 cut(s) | 111, 607, 664, 685, 869, 1772 |
| Hpy166II | GTNNAC | 5 cut(s) | 119, 412, 1419, 1882, 1927 |
| Hpy8I | GTNNAC | 5 cut(s) | 119, 412, 1419, 1882, 1927 |
| Hpy99I | CGWCG | 1 cut(s) | 1029 |
| HpyAV | CCTTC | 4 cut(s) | 1269, 1473, 1584, 2008 |
| HpyCH4III | ACNGT | 3 cut(s) | 539, 604, 1238 |
| HpyCH4V | TGCA | 8 cut(s) | 985, 1289, 1343, 1485, 1542, 1802, 1860, 1952 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 767, 1073, 1082, 1295, 1307, 1433, 1805 |
| Hsp92II | CATG | 2 cut(s) | 1252, 1703 |
| HspAI | GCGC | 1 cut(s) | 2026 |
| Kpn2I | TCCGGA | 1 cut(s) | 191 |
| KpnI | GGTACC | 1 cut(s) | 1903 |
| KspI | CCGCGG | 1 cut(s) | 1729 |
| Lsp1109I | GCAGC | 8 cut(s) | 214, 1285, 1327, 1335, 1505, 1582, 1786, 1853 |
| LweI | GCATC | 6 cut(s) | 16, 1009, 1054, 1141, 1209, 1618 |
| MabI | ACCWGGT | 1 cut(s) | 1813 |
| MaeI | CTAG | 2 cut(s) | 282, 2074 |
| MaeIII | GTNAC | 6 cut(s) | 62, 539, 616, 972, 1238, 1291 |
| MbiI | CCGCTC | 1 cut(s) | 1118 |
| MflI | RGATCY | 4 cut(s) | 359, 661, 856, 961 |
| MhlI | GDGCHC | 6 cut(s) | 219, 407, 500, 877, 1381, 1387 |
| MlyI | GAGTC | 2 cut(s) | 35, 59 |
| MmeI | TCCRAC | 2 cut(s) | 834, 2025 |
| MroI | TCCGGA | 1 cut(s) | 191 |
| MseI | TTAA | 7 cut(s) | 386, 470, 1353, 1506, 1560, 1715, 1836 |
| MspA1I | CMGCKG | 2 cut(s) | 227, 1728 |
| MspR9I | CCNGG | 9 cut(s) | 12, 334, 348, 566, 785, 928, 948, 1547, 1815 |
| MssI | GTTTAAAC | 1 cut(s) | 1507 |
| Mva1269I | GAATGC | 1 cut(s) | 1291 |
| MvaI | CCWGG | 5 cut(s) | 12, 928, 948, 1547, 1815 |
| MvnI | CGCG | 1 cut(s) | 1728 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 767, 1073, 1082, 1295, 1307, 1433, 1805 |
| NciI | CCSGG | 4 cut(s) | 334, 348, 566, 785 |
| NdeI | CATATG | 1 cut(s) | 449 |
| NlaIII | CATG | 2 cut(s) | 1252, 1703 |
| NlaIV | GGNNCC | 8 cut(s) | 140, 217, 373, 486, 663, 858, 935, 1901 |
| NmeAIII | GCCGAG | 2 cut(s) | 331, 2033 |
| NmuCI | GTSAC | 2 cut(s) | 62, 539 |
| PceI | AGGCCT | 1 cut(s) | 36 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 194 |
| PctI | GAATGC | 1 cut(s) | 1291 |
| PfeI | GAWTC | 4 cut(s) | 242, 365, 1019, 1688 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 886 |
| PinAI | ACCGGT | 1 cut(s) | 800 |
| Ple19I | CGATCG | 1 cut(s) | 55 |
| PleI | GAGTC | 2 cut(s) | 35, 59 |
| PmeI | GTTTAAAC | 1 cut(s) | 1507 |
| PpsI | GAGTC | 2 cut(s) | 35, 59 |
| PsiI | TTATAA | 1 cut(s) | 1743 |
| Psp124BI | GAGCTC | 3 cut(s) | 407, 500, 877 |
| Psp6I | CCWGG | 5 cut(s) | 10, 926, 946, 1545, 1813 |
| PspFI | CCCAGC | 4 cut(s) | 223, 683, 1310, 2030 |
| PspGI | CCWGG | 5 cut(s) | 10, 926, 946, 1545, 1813 |
| PspN4I | GGNNCC | 8 cut(s) | 140, 217, 373, 486, 663, 858, 935, 1901 |
| PspOMI | GGGCCC | 1 cut(s) | 215 |
| PspPI | GGNCC | 9 cut(s) | 138, 215, 216, 237, 484, 563, 1252, 1549, 1828 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 592, 624 |
| PstI | CTGCAG | 1 cut(s) | 1345 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1295, 1847 |
| PsuI | RGATCY | 4 cut(s) | 359, 661, 856, 961 |
| PvuI | CGATCG | 1 cut(s) | 55 |
| PvuII | CAGCTG | 1 cut(s) | 227 |
| RsaI | GTAC | 6 cut(s) | 601, 698, 734, 1015, 1901, 1977 |
| RsaNI | GTAC | 6 cut(s) | 600, 697, 733, 1014, 1900, 1976 |
| SacI | GAGCTC | 3 cut(s) | 407, 500, 877 |
| SacII | CCGCGG | 1 cut(s) | 1729 |
| SaqAI | TTAA | 7 cut(s) | 386, 470, 1353, 1506, 1560, 1715, 1836 |
| Sau96I | GGNCC | 9 cut(s) | 138, 215, 216, 237, 484, 563, 1252, 1549, 1828 |
| ScaI | AGTACT | 1 cut(s) | 601 |
| SchI | GAGTC | 2 cut(s) | 35, 59 |
| ScrFI | CCNGG | 9 cut(s) | 12, 334, 348, 566, 785, 928, 948, 1547, 1815 |
| SduI | GDGCHC | 6 cut(s) | 219, 407, 500, 877, 1381, 1387 |
| SexAI | ACCWGGT | 1 cut(s) | 1813 |
| SfaNI | GCATC | 6 cut(s) | 16, 1009, 1054, 1141, 1209, 1618 |
| SfcI | CTRYAG | 1 cut(s) | 1341 |
| Sfr303I | CCGCGG | 1 cut(s) | 1729 |
| SgrBI | CCGCGG | 1 cut(s) | 1729 |
| SinI | GGWCC | 4 cut(s) | 138, 237, 484, 1828 |
| SmlI | CTYRAG | 4 cut(s) | 1651, 1704, 1784, 1919 |
| SmoI | CTYRAG | 4 cut(s) | 1651, 1704, 1784, 1919 |
| SseBI | AGGCCT | 1 cut(s) | 36 |
| SspI | AATATT | 1 cut(s) | 1776 |
| SspMI | CTAG | 2 cut(s) | 282, 2074 |
| SstI | GAGCTC | 3 cut(s) | 407, 500, 877 |
| StuI | AGGCCT | 1 cut(s) | 36 |
| StyD4I | CCNGG | 9 cut(s) | 10, 332, 346, 564, 783, 926, 946, 1545, 1813 |
| TaaI | ACNGT | 3 cut(s) | 539, 604, 1238 |
| TaqI | TCGA | 4 cut(s) | 39, 100, 108, 611 |
| TatI | WGTACW | 3 cut(s) | 599, 696, 1013 |
| TauI | GCSGC | 7 cut(s) | 305, 572, 585, 627, 791, 794, 814 |
| TfiI | GAWTC | 4 cut(s) | 242, 365, 1019, 1688 |
| Tru1I | TTAA | 7 cut(s) | 386, 470, 1353, 1506, 1560, 1715, 1836 |
| Tru9I | TTAA | 7 cut(s) | 386, 470, 1353, 1506, 1560, 1715, 1836 |
| TscAI | CASTG | 6 cut(s) | 75, 169, 445, 1350, 1426, 1963 |
| TseFI | GTSAC | 2 cut(s) | 62, 539 |
| TseI | GCWGC | 8 cut(s) | 227, 1298, 1340, 1348, 1493, 1595, 1799, 1841 |
| Tsp45I | GTSAC | 2 cut(s) | 62, 539 |
| TspDTI | ATGAA | 3 cut(s) | 1688, 1692, 1763 |
| TspGWI | ACGGA | 3 cut(s) | 50, 1455, 1813 |
| TspRI | CASTG | 6 cut(s) | 75, 169, 445, 1350, 1426, 1963 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 886 |
| VpaK11BI | GGWCC | 4 cut(s) | 138, 237, 484, 1828 |
| XapI | RAATTY | 2 cut(s) | 337, 1912 |
| XspI | CTAG | 2 cut(s) | 282, 2074 |
| ZrmI | AGTACT | 1 cut(s) | 601 |