Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0006030

Physical Location & Seq

Genomic Coordinates Forward (+)

37516278 .. 37520490

Gene Structure 4213 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1260800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2109 bp

ATGTCGCATTCCGGGAAGCCCAGTTCGGACCAGCTCGGCCTCGACTCGCTCAACGATCGATTCCGTGACTCGCTGAGTTGCGAAGCCAACAAGCCCGATTTCCGGGAACTCGATCTGGGTTCGCCCGTTTCGCCTCTTCGGACTCGCCAGAGCGGCGGCATCGCCACTGCTACAAGTAGTAGCTCCAGCTCCTCAGGATCGGTTTCCGGCCGAAATGGGCCCAACCAAGTTGCCAGAAGGGCCGAATCAGCCCCTAACAACCACTCCGGCGAGCTATCCGGCTCTAGCGAGAGCAGTCCCACCGCCGCCGAAAGCGTCCGATCCGCCGGAAACACCCGCAGTTTCAAACCGGGTAATACAAGATCCGATTCGGGTTCCACCCACCCGCATATATACTCGGGTCAGAGCTCCGTGAGCTCTCCGCCGCCAAGTGTTTTGCCCACTGGGAACATATGCCCATCTGGGAAAATCTTAAAAACGGGTATGGTTCTGAACCGTAGCTCCAGAACCGACGTTTTGGGTTCGGGTACGGGGAATTACGGTCATGGGAGCATAATGCGGGGCGGTCAGGCTGCTAAAGGCGGTGGCACTGAAGCGGCGAGTTCCCTGAGTTCGAGGGCGAGCGCCGTGAGTTCGAGGGGTAGCGGCGGTGGCGGAGACTTGTTGAAGAGAACAATGGTGAGTGTGGATCCCGAGGAGTTGAAGAGAGCTGGGAATGAGAAGTACAGAAGAGGCCATTTTGCAGAGGCTTTGAGCTTGTACGATCGGGCAATTGCATTGTCTCCGGCCAATGCTGCCTACCGGAGCAACCGGGCTGCGGCATTGACGGGTCTAGGACGTCTGACGGAGGCGGTGAGGGAATGCGAGGAGGCGGTGAGGTTGGATCCCAATTATGGCAGGGCTCACCAGCGTTTGGGGTCTTTGTTTCTTAGGTTAGGGCAGGTCGAGAATTCCAGGAGGCACCTTTCTTTTCCGGGGCTGCAGCCAGATCCAGCTGAGTTACAGAAACTGCAGGCAGTAGAGAAGTATCTAAAAAAATGTACAGATTCCCGTCGTGTAGGAGATTGGAGAAGTGTATTGAGGGAATGTGATTCTACTATTGCTTCCGGAGCTGACTCTTCTCCTCAGCTCTCTATGTGTAGAGCGGAAGCACTTTTGAAGCTTCACCAAATTGATGATGCTGAATCAGTCATATTGACTACACCTAGATTAGACACTCATTCCAACCTTTCACAATCTAAGTTCTTTGGAATGCTTTCTGAAGCTTACACTAACTTTGTCTTGGCCCAAATTGAATTGGCATTTGGAAGGTTTGAGAATGCAGTTACTGCTGCTGAGAAAGCAGCGCAGATTGATCCCCGAAACATTGAAACTGCAGTGCTGCTGAGTAATGTGCGCTTGGTTATGAGAGCTCGTGCCCGGGGCAATGATCTCTTCAAGTCCGAAAGGTTCACAGAAGCTTGTGCAGCATACGGGGAAGGTCTGAGACTCGATCCTTCAAACTCTGTTCTCTATTGCAACAGAGCAGCCTGTTGGTCTAAACTTGGGATGTGGGAGCGTTCCATTGAAGACTGCAACCAAGCCTTATGTATTATACCCAATTATACAAAAGCCCTTCTCCGAAGGGCTGCCTCAAACAGCAAGCTAGAAAGATGGGTAGAGGCTGTAAAAGATTATGAGGTCTTGAGGAGGTTGCTTCCTGACGACAATGAAGTTGCTGAATCTTTGTTTCATGCTCAAGTTGCATTAAAAAAATCCCGTGGGGAAGAAGTTTCTAATATAAAGTTTGGGGGTGAAGTGGAAGAAATACTAGGTATTGAGCAGTTCAGAGCTGCGATATCTTTACCAGGTGTCTCTGTGGTCCATTTCAAAGCAGCCTCTGATTTGCAATGCAAGCAAGTATCACCTTTTCTGGACACGCTTTGTGGTCGCTACCCATCCATAAATTTCCTCAAGGTTGACATTGAAGAAAACGTAGCAGTTGCGAACACCGAAAATGTGAGGATTGTACCAACATTCAAGATTTACAAAAATGGTAGCCGAGTGAAGGAAATGGTGCGCCCCAGTTGCAATATGTTGGAACACTCGGTCAGGCATTATAGCTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0006950 GO:0006970 GO:0008150 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0010033 GO:0010646 GO:0010647 GO:0023051 GO:0023056 GO:0033993 GO:0042221 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0065007 GO:0097305 GO:1901419 GO:1901421 GO:1901700 GO:1905957 GO:1905959

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_1 TPR_11 TPR_16 TPR_19 TPR_2 TPR_8 Thioredoxin

Protein Analysis

703

Amino Acids

76.07

Weight (kDa)

8.99

Isoelectric Point (pI)

54.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_16	PF13432	237 - 297	3e-08	Tetratricopeptide repeat
TPR_11	PF13414	238 - 279	6.9e-06	TPR repeat
Thioredoxin	PF00085	607 - 687	1.8e-11	Thioredoxin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006030)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53300
fragaria_vesca	FvH4_3g18510 FvH4_3g18510
malus_domestica	MD03G1241500.v1.1 MD11G1260800.v1.1 MD15G1393600.v1.1
prunus_persica	Prupe.4G167400_v2.0.a1 Prupe.4G167400_v2.0.a1 Prupe.4G167400_v2.0.a1
pyrus_communis	pycom03g18830 pycom11g23020
rosa_chinensis	RchiOBHm_Chr5g0031271
rosa_laevigata	RLG00000033297
rosa_multiflora	Rmu_co8169312.1_g000001 Rmu_sc0006236.1_g000002 Rmu_sc0010698.1_g000009 Rmu_sc0027117.1_g000001
rosa_roxburghii	Rroxscaffold_1G00049020
rosa_rugosa	Rorug05G0123400
rosa_samantha	Rh5AG216900 Rh5BG216400 Rh5BG505500 Rh5CG240100 Rh5CG529200 Rh5DG221600 Rh7DG001600
rosa_wichuraiana	Rw5G019840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	841
Acc36I	ACCTGC	1 cut(s)	931
AccB1I	GGYRCC	1 cut(s)	960
AccB7I	CCANNNNNTGG	1 cut(s)	913
AccBSI	CCGCTC	2 cut(s)	153, 1145
AccIII	TCCGGA	1 cut(s)	1106
AcoI	YGGCCR	2 cut(s)	208, 786
AcsI	RAATTY	2 cut(s)	949, 1945
AcuI	CTGAAG	2 cut(s)	612, 1281
AcyI	GRCGYC	1 cut(s)	838
AfaI	GTAC	5 cut(s)	529, 725, 761, 1042, 2010
AfiI	CCNNNNNNNGG	5 cut(s)	102, 817, 893, 913, 2047
AjnI	CCWGG	2 cut(s)	953, 1846
AjuI	GAANNNNNNNTTGG	2 cut(s)	1287, 1319
AloI	GAACNNNNNNTCC	4 cut(s)	7, 39, 485, 517
Alw21I	GWGCWC	3 cut(s)	410, 419, 1414
Alw26I	GTCTC	4 cut(s)	651, 786, 1480, 1858
AlwNI	CAGNNNCTG	3 cut(s)	1009, 1328, 1880
Ama87I	CYCGRG	3 cut(s)	397, 692, 1419
Aor13HI	TCCGGA	1 cut(s)	1106
AoxI	GGCC	7 cut(s)	37, 208, 218, 240, 733, 786, 1284
ApaI	GGGCCC	1 cut(s)	222
ApoI	RAATTY	2 cut(s)	949, 1945
Asp700I	GAANNNNTTC	1 cut(s)	1255
AspLEI	GCGC	4 cut(s)	626, 1348, 1398, 2061
AspS9I	GGNCC	6 cut(s)	28, 218, 219, 240, 1285, 1861
AsuC2I	CCSGG	7 cut(s)	13, 104, 351, 812, 975, 1420, 1421
AsuHPI	GGTGA	7 cut(s)	691, 865, 886, 896, 1157, 1805, 1896
AvaI	CYCGRG	3 cut(s)	397, 692, 1419
AvaII	GGWCC	2 cut(s)	28, 1861
AxyI	CCTNAGG	1 cut(s)	193
BaeGI	GKGCMC	2 cut(s)	222, 1420
BamHI	GGATCC	2 cut(s)	688, 883
BanI	GGYRCC	1 cut(s)	960
BanII	GRGCYC	5 cut(s)	222, 410, 419, 904, 1414
BauI	CACGAG	1 cut(s)	1413
BbsI	GAAGAC	1 cut(s)	1575
Bbv12I	GWGCWC	3 cut(s)	410, 419, 1414
BbvCI	CCTCAGC	1 cut(s)	1125
BccI	CCATC	3 cut(s)	466, 1647, 1945
BceAI	ACGGC	1 cut(s)	611
BciT130I	CCWGG	2 cut(s)	955, 1848
BcnI	CCSGG	7 cut(s)	13, 104, 351, 812, 975, 1420, 1421
BcoDI	GTCTC	4 cut(s)	651, 786, 1480, 1858
BfaI	CTAG	5 cut(s)	285, 833, 1206, 1646, 1811
BfmI	CTRYAG	3 cut(s)	980, 1010, 1374
BfoI	RGCGCY	1 cut(s)	627
BfuAI	ACCTGC	1 cut(s)	931
BglI	GCCNNNNNGGC	2 cut(s)	153, 239
Bme1390I	CCNGG	9 cut(s)	13, 104, 351, 812, 955, 975, 1420, 1421, 1848
Bme18I	GGWCC	2 cut(s)	28, 1861
BmeT110I	CYCGRG	3 cut(s)	397, 692, 1419
BmgT120I	GGNCC	6 cut(s)	28, 218, 219, 240, 1285, 1861
BmiI	GGNNCC	5 cut(s)	220, 376, 690, 885, 962
BmrFI	CCNGG	9 cut(s)	13, 104, 351, 812, 955, 975, 1420, 1421, 1848
BmrI	ACTGGG	3 cut(s)	15, 453, 2058
BmsI	GCATC	2 cut(s)	168, 1168
BmuI	ACTGGG	3 cut(s)	15, 453, 2058
BpiI	GAAGAC	1 cut(s)	1575
BpmI	CTGGAG	2 cut(s)	169, 487
Bpu10I	CCTNAGC	1 cut(s)	1125
BpuEI	CTTGAG	3 cut(s)	1705, 1722, 1937
BpuMI	CCSGG	7 cut(s)	13, 104, 351, 812, 975, 1420, 1421
Bsa29I	ATCGAT	1 cut(s)	58
BsaHI	GRCGYC	1 cut(s)	838
BsaJI	CCNNGG	5 cut(s)	693, 974, 1419, 1420, 1759
BsaWI	WCCGGW	2 cut(s)	801, 1106
BsaXI	ACNNNNNCTCC	4 cut(s)	248, 278, 485, 515
Bsc4I	CCNNNNNNNGG	5 cut(s)	102, 817, 893, 913, 2047
Bse1I	ACTGG	3 cut(s)	21, 448, 2064
Bse21I	CCTNAGG	1 cut(s)	193
Bse3DI	GCAATG	2 cut(s)	1432, 1895
BseAI	TCCGGA	1 cut(s)	1106
BseBI	CCWGG	2 cut(s)	955, 1848
BseCI	ATCGAT	1 cut(s)	58
BseDI	CCNNGG	5 cut(s)	693, 974, 1419, 1420, 1759
BseGI	GGATG	2 cut(s)	1554, 1937
BseLI	CCNNNNNNNGG	5 cut(s)	102, 817, 893, 913, 2047
BseMI	GCAATG	2 cut(s)	1432, 1895
BseMII	CTCAG	8 cut(s)	65, 207, 599, 987, 1139, 1326, 1376, 1475
BseNI	ACTGG	3 cut(s)	21, 448, 2064
BseRI	GAGGAG	5 cut(s)	181, 710, 881, 1113, 1702
BseSI	GKGCMC	2 cut(s)	222, 1420
BseX3I	CGGCCG	1 cut(s)	208
BseYI	CCCAGC	1 cut(s)	710
BsgI	GTGCAG	1 cut(s)	1485
Bsh1285I	CGRYCG	3 cut(s)	58, 211, 766
BshFI	GGCC	7 cut(s)	39, 210, 220, 242, 735, 788, 1286
BshNI	GGYRCC	1 cut(s)	960
BshVI	ATCGAT	1 cut(s)	58
BsiEI	CGRYCG	3 cut(s)	58, 211, 766
BsiHKAI	GWGCWC	3 cut(s)	410, 419, 1414
BsiHKCI	CYCGRG	3 cut(s)	397, 692, 1419
BslFI	GGGAC	1 cut(s)	282
BslI	CCNNNNNNNGG	5 cut(s)	102, 817, 893, 913, 2047
BsmAI	GTCTC	4 cut(s)	651, 786, 1480, 1858
BsmFI	GGGAC	1 cut(s)	282
BsmI	GAATGC	4 cut(s)	7, 866, 1257, 1324
BsnI	GGCC	7 cut(s)	39, 210, 220, 242, 735, 788, 1286
BsoBI	CYCGRG	3 cut(s)	397, 692, 1419
Bsp120I	GGGCCC	1 cut(s)	218
Bsp1286I	GDGCHC	6 cut(s)	222, 410, 419, 904, 1414, 1420
Bsp13I	TCCGGA	1 cut(s)	1106
Bsp1407I	TGTACA	1 cut(s)	1040
BspANI	GGCC	7 cut(s)	39, 210, 220, 242, 735, 788, 1286
BspCNI	CTCAG	8 cut(s)	66, 206, 600, 988, 1138, 1327, 1377, 1476
BspDI	ATCGAT	1 cut(s)	58
BspEI	TCCGGA	1 cut(s)	1106
BspLI	GGNNCC	5 cut(s)	220, 376, 690, 885, 962
BspMAI	CTGCAG	3 cut(s)	984, 1014, 1378
BspMI	ACCTGC	1 cut(s)	931
BspT107I	GGYRCC	1 cut(s)	960
BsrBI	CCGCTC	2 cut(s)	153, 1145
BsrDI	GCAATG	2 cut(s)	1432, 1895
BsrGI	TGTACA	1 cut(s)	1040
BsrI	ACTGG	3 cut(s)	21, 448, 2064
BssECI	CCNNGG	5 cut(s)	693, 974, 1419, 1420, 1759
BssNI	GRCGYC	1 cut(s)	838
BssSI	CACGAG	1 cut(s)	1413
Bst2BI	CACGAG	1 cut(s)	1413
Bst2UI	CCWGG	2 cut(s)	955, 1848
Bst4CI	ACNGT	2 cut(s)	497, 542
Bst6I	CTCTTC	6 cut(s)	141, 662, 698, 724, 1123, 1439
BstACI	GRCGYC	1 cut(s)	838
BstAPI	GCANNNNNTGC	1 cut(s)	1328
BstAUI	TGTACA	1 cut(s)	1040
BstC8I	GCNNGC	5 cut(s)	272, 622, 1014, 1643, 1895
BstDSI	CCRYGG	1 cut(s)	1759
BstF5I	GGATG	2 cut(s)	1554, 1937
BstH2I	RGCGCY	1 cut(s)	627
BstHHI	GCGC	4 cut(s)	626, 1348, 1398, 2061
BstMAI	GTCTC	4 cut(s)	651, 786, 1480, 1858
BstMCI	CGRYCG	3 cut(s)	58, 211, 766
BstNI	CCWGG	2 cut(s)	955, 1848
BstSCI	CCNGG	9 cut(s)	11, 102, 349, 810, 953, 973, 1418, 1419, 1846
BstSFI	CTRYAG	3 cut(s)	980, 1010, 1374
BstSLI	GKGCMC	2 cut(s)	222, 1420
BstV2I	GAAGAC	1 cut(s)	1575
BstX2I	RGATCY	4 cut(s)	362, 688, 883, 988
BstYI	RGATCY	4 cut(s)	362, 688, 883, 988
BstZI	CGGCCG	1 cut(s)	208
Bsu15I	ATCGAT	1 cut(s)	58
Bsu36I	CCTNAGG	1 cut(s)	193
BsuRI	GGCC	7 cut(s)	39, 210, 220, 242, 735, 788, 1286
BsuTUI	ATCGAT	1 cut(s)	58
BtgI	CCRYGG	1 cut(s)	1759
BtgZI	GCGATG	1 cut(s)	145
BtsCI	GGATG	2 cut(s)	1554, 1937
BtsI	GCAGTG	2 cut(s)	165, 1383
BtsIMutI	CAGTG	4 cut(s)	165, 441, 588, 1383
BveI	ACCTGC	1 cut(s)	931
Cac8I	GCNNGC	5 cut(s)	272, 622, 1014, 1643, 1895
CaiI	CAGNNNCTG	3 cut(s)	1009, 1328, 1880
CfoI	GCGC	4 cut(s)	626, 1348, 1398, 2061
Cfr13I	GGNCC	6 cut(s)	28, 218, 219, 240, 1285, 1861
Cfr9I	CCCGGG	1 cut(s)	1419
ClaI	ATCGAT	1 cut(s)	58
CseI	GACGC	1 cut(s)	304
CsiI	ACCWGGT	1 cut(s)	1846
Csp6I	GTAC	5 cut(s)	528, 724, 760, 1041, 2009
CviAII	CATG	2 cut(s)	545, 1733
CviQI	GTAC	5 cut(s)	528, 724, 760, 1041, 2009
EaeI	YGGCCR	2 cut(s)	208, 786
EagI	CGGCCG	1 cut(s)	208
Eam1104I	CTCTTC	6 cut(s)	141, 662, 698, 724, 1123, 1439
EarI	CTCTTC	6 cut(s)	141, 662, 698, 724, 1123, 1439
EciI	GGCGGA	3 cut(s)	313, 411, 669
Ecl136II	GAGCTC	3 cut(s)	408, 417, 1412
EclXI	CGGCCG	1 cut(s)	208
Eco24I	GRGCYC	5 cut(s)	222, 410, 419, 904, 1414
Eco32I	GATATC	1 cut(s)	1839
Eco47I	GGWCC	2 cut(s)	28, 1861
Eco52I	CGGCCG	1 cut(s)	208
Eco53kI	GAGCTC	3 cut(s)	408, 417, 1412
Eco57I	CTGAAG	2 cut(s)	612, 1281
Eco81I	CCTNAGG	1 cut(s)	193
Eco88I	CYCGRG	3 cut(s)	397, 692, 1419
EcoICRI	GAGCTC	3 cut(s)	408, 417, 1412
EcoRI	GAATTC	1 cut(s)	949
EcoRII	CCWGG	2 cut(s)	953, 1846
EcoRV	GATATC	1 cut(s)	1839
EcoT38I	GRGCYC	5 cut(s)	222, 410, 419, 904, 1414
FaeI	CATG	2 cut(s)	548, 1736
FaqI	GGGAC	1 cut(s)	282
FatI	CATG	2 cut(s)	544, 1732
FauI	CCCGC	3 cut(s)	344, 393, 552
FauNDI	CATATG	1 cut(s)	452
FokI	GGATG	2 cut(s)	1561, 1924
FriOI	GRGCYC	5 cut(s)	222, 410, 419, 904, 1414
FspBI	CTAG	5 cut(s)	285, 833, 1206, 1646, 1811
GlaI	GCGC	4 cut(s)	625, 1347, 1397, 2060
GsaI	CCCAGC	1 cut(s)	714
GsuI	CTGGAG	2 cut(s)	169, 487
HaeII	RGCGCY	1 cut(s)	627
HaeIII	GGCC	7 cut(s)	39, 210, 220, 242, 735, 788, 1286
HgaI	GACGC	1 cut(s)	304
HhaI	GCGC	4 cut(s)	626, 1348, 1398, 2061
Hin1I	GRCGYC	1 cut(s)	838
Hin1II	CATG	2 cut(s)	548, 1736
Hin6I	GCGC	4 cut(s)	624, 1346, 1396, 2059
HinP1I	GCGC	4 cut(s)	624, 1346, 1396, 2059
HincII	GTYRAC	1 cut(s)	1960
HindII	GTYRAC	1 cut(s)	1960
HindIII	AAGCTT	3 cut(s)	1160, 1263, 1458
HphI	GGTGA	7 cut(s)	691, 865, 886, 896, 1157, 1805, 1896
Hpy166II	GTNNAC	2 cut(s)	1452, 1960
Hpy188III	TCNNGA	9 cut(s)	195, 504, 692, 946, 1107, 1684, 1700, 1913, 2020
Hpy8I	GTNNAC	2 cut(s)	1452, 1960
Hpy99I	CGWCG	2 cut(s)	515, 1056
HpyAV	CCTTC	7 cut(s)	231, 1302, 1472, 1506, 1617, 1625, 2041
HpyCH4III	ACNGT	2 cut(s)	497, 542
HpyCH4IV	ACGT	3 cut(s)	513, 838, 1974
HpySE526I	ACGT	3 cut(s)	513, 838, 1974
Hsp92I	GRCGYC	1 cut(s)	838
Hsp92II	CATG	2 cut(s)	548, 1736
HspAI	GCGC	4 cut(s)	624, 1346, 1396, 2059
Kpn2I	TCCGGA	1 cut(s)	1106
LmnI	GCTCC	8 cut(s)	188, 194, 413, 506, 549, 804, 1109, 1555
LweI	GCATC	2 cut(s)	168, 1168
MabI	ACCWGGT	1 cut(s)	1846
MaeI	CTAG	5 cut(s)	285, 833, 1206, 1646, 1811
MaeII	ACGT	3 cut(s)	513, 838, 1974
MaeIII	GTNAC	3 cut(s)	65, 999, 1324
MbiI	CCGCTC	2 cut(s)	153, 1145
MfeI	CAATTG	1 cut(s)	771
MflI	RGATCY	4 cut(s)	362, 688, 883, 988
MhlI	GDGCHC	6 cut(s)	222, 410, 419, 904, 1414, 1420
MluCI	AATT	9 cut(s)	535, 771, 889, 949, 1170, 1290, 1295, 1600, 1945
MlyI	GAGTC	5 cut(s)	38, 62, 136, 1109, 1482
MmeI	TCCRAC	3 cut(s)	861, 1248, 2058
MroI	TCCGGA	1 cut(s)	1106
MroXI	GAANNNNTTC	1 cut(s)	1255
MseI	TTAA	2 cut(s)	473, 1748
MspA1I	CMGCKG	1 cut(s)	995
MspR9I	CCNGG	9 cut(s)	13, 104, 351, 812, 955, 975, 1420, 1421, 1848
MunI	CAATTG	1 cut(s)	771
Mva1269I	GAATGC	4 cut(s)	7, 866, 1257, 1324
MvaI	CCWGG	2 cut(s)	955, 1848
NciI	CCSGG	7 cut(s)	13, 104, 351, 812, 975, 1420, 1421
NdeI	CATATG	1 cut(s)	452
NlaIII	CATG	2 cut(s)	548, 1736
NlaIV	GGNNCC	5 cut(s)	220, 376, 690, 885, 962
NmeAIII	GCCGAG	2 cut(s)	15, 2066
NmuCI	GTSAC	1 cut(s)	65
PctI	GAATGC	4 cut(s)	7, 866, 1257, 1324
PdmI	GAANNNNTTC	1 cut(s)	1255
PfeI	GAWTC	7 cut(s)	60, 245, 368, 1046, 1091, 1184, 1721
PflMI	CCANNNNNTGG	1 cut(s)	913
PfoI	TCCNGGA	3 cut(s)	11, 102, 953
Ple19I	CGATCG	2 cut(s)	58, 766
PleI	GAGTC	5 cut(s)	38, 62, 136, 1109, 1482
PpsI	GAGTC	5 cut(s)	38, 62, 136, 1109, 1482
Psp124BI	GAGCTC	3 cut(s)	410, 419, 1414
Psp6I	CCWGG	2 cut(s)	953, 1846
PspFI	CCCAGC	1 cut(s)	710
PspGI	CCWGG	2 cut(s)	953, 1846
PspN4I	GGNNCC	5 cut(s)	220, 376, 690, 885, 962
PspOMI	GGGCCC	1 cut(s)	218
PspPI	GGNCC	6 cut(s)	28, 218, 219, 240, 1285, 1861
PstI	CTGCAG	3 cut(s)	984, 1014, 1378
PstNI	CAGNNNCTG	3 cut(s)	1009, 1328, 1880
PsuI	RGATCY	4 cut(s)	362, 688, 883, 988
PvuI	CGATCG	2 cut(s)	58, 766
PvuII	CAGCTG	1 cut(s)	995
RsaI	GTAC	5 cut(s)	529, 725, 761, 1042, 2010
RsaNI	GTAC	5 cut(s)	528, 724, 760, 1041, 2009
SacI	GAGCTC	3 cut(s)	410, 419, 1414
SaqAI	TTAA	2 cut(s)	473, 1748
Sau96I	GGNCC	6 cut(s)	28, 218, 219, 240, 1285, 1861
SchI	GAGTC	5 cut(s)	38, 62, 136, 1109, 1482
ScrFI	CCNGG	9 cut(s)	13, 104, 351, 812, 955, 975, 1420, 1421, 1848
SduI	GDGCHC	6 cut(s)	222, 410, 419, 904, 1414, 1420
SexAI	ACCWGGT	1 cut(s)	1846
SfaNI	GCATC	2 cut(s)	168, 1168
SfcI	CTRYAG	3 cut(s)	980, 1010, 1374
SinI	GGWCC	2 cut(s)	28, 1861
SmaI	CCCGGG	1 cut(s)	1421
SmlI	CTYRAG	3 cut(s)	1684, 1737, 1952
SmoI	CTYRAG	3 cut(s)	1684, 1737, 1952
Sse9I	AATT	9 cut(s)	535, 771, 889, 949, 1170, 1290, 1295, 1600, 1945
SspMI	CTAG	5 cut(s)	285, 833, 1206, 1646, 1811
SstI	GAGCTC	3 cut(s)	410, 419, 1414
StyD4I	CCNGG	9 cut(s)	11, 102, 349, 810, 953, 973, 1418, 1419, 1846
TaaI	ACNGT	2 cut(s)	497, 542
TaiI	ACGT	3 cut(s)	516, 841, 1977
TaqI	TCGA	7 cut(s)	42, 58, 111, 614, 635, 945, 1491
TaqII	GACCGA	1 cut(s)	2077
TasI	AATT	9 cut(s)	535, 771, 889, 949, 1170, 1290, 1295, 1600, 1945
TatI	WGTACW	2 cut(s)	723, 1040
TauI	GCSGC	7 cut(s)	156, 159, 308, 427, 599, 648, 821
TfiI	GAWTC	7 cut(s)	60, 245, 368, 1046, 1091, 1184, 1721
Tru1I	TTAA	2 cut(s)	473, 1748
Tru9I	TTAA	2 cut(s)	473, 1748
TscAI	CASTG	4 cut(s)	172, 448, 595, 1383
TseFI	GTSAC	1 cut(s)	65
Tsp45I	GTSAC	1 cut(s)	65
TspDTI	ATGAA	2 cut(s)	1721, 1725
TspGWI	ACGGA	3 cut(s)	53, 400, 860
TspMI	CCCGGG	1 cut(s)	1419
TspRI	CASTG	4 cut(s)	172, 448, 595, 1383
Van91I	CCANNNNNTGG	1 cut(s)	913
VpaK11BI	GGWCC	2 cut(s)	28, 1861
XapI	RAATTY	2 cut(s)	949, 1945
XmaI	CCCGGG	1 cut(s)	1419
XmnI	GAANNNNTTC	1 cut(s)	1255
XspI	CTAG	5 cut(s)	285, 833, 1206, 1646, 1811
ZraI	GACGTC	1 cut(s)	839

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.