Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0006030

Physical Location & Seq

Genomic Coordinates Reverse (-)

25390431 .. 25393377

Gene Structure 2947 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000033297

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2088 bp

ATGTCGCACTCCGGGAAGCCCATTTCGGAGCCAGGCGTCGACTCCTCGCTCTCCGATCGCCTCCGTGACTCACTGAGTTGCGAGGCCAACAAGCCCGACTTCCGAGAACTCGATCTGGGCTCGCCCGTTTCGCCGCTGCGGACTCGCCAGAGCGGTGGGCTCGCCACTGCCACCAGCAGCAGCTCCAGTTCGTCCGGATCGGTGTCGGGTCGGAATGGGCCCAACCCGGTTAATGCGAAGAGGTCCGGCTCGGGGCCCAACAACAACAGCAACAACAACCACTCCGGCGAGCTCTCCGGCTCCAGCGACAGCAGTCCCACAAATACCCGGAATAGCTCCAAACCGGGTCATACGAGATCCAATTCCGGCTCCGCCCACCCGTTAATTTACTCGGGTCAGAGCTCCTCCGCCGTGAACTCGTCGCCGAGATCGAATGTTCTGCCGACCGGGAACATATGCCCATCCGGGAAGATCCTCAAGGCGGGTATGGTTCCGAATCGGAGCTCCAGAACCGACGTTTTGGGCTCCGGGACGGGCTATTACGGCCACGGGAGCATAATGCGGGGCGGCGCGGCGGCCAAGAGCGTCGGCGCCACCGAGGCGGTGAGCTCCAGAACAAGCGGCGGCGGCGGCGGAGAGTTGGGGAAGAGAGGAATGGGGAGTGTGGATCCGGAGGAGGTGAAGAGAGCTGGGAATGAGCACTACAGAAGAGGCAATTTTGCAGAGGCTTTGAGCTTGTATGATCGCGCAATTGCTTTGGCTCCGGCCAATGCGGCTTACCGGAGCAACCGGGCTGCGGCATTGACCGGTCTAGGGCGGCTGGGGGAGGCGGTGAGGGAGTGTGAGGAGGCTGTGAAGTTGGATCCCAATTATGGCAGAGCTCACCACCGTTTGGGTTCTTTGTTTCTTAGGTTAGGGCAGGTGGACAATGCCAGGAGGCATCTTTGTGTTCCAGGTCTGCAGCCGGATGCGGCTGAGTTACGGAAATTAGAGGTAGTAGAGAAGCATCTTAAAAAATGTACAGATGCACGTCGTGTAGGAGATTGGAAAAGTGTATTGAGGGAAAATGACTCTGCTGTTGCTGCTGGAGCTGACTTTTCTCCCCAGCTCTCTATGTGTAGAGCGGAAGCACATTTGAAGCTCCACCAAATTGATGATGCTGAATCAGTCCTATCAAATATACCCAAATTAGACACATATACCAACTCCTCACAATCTAAGTTCTTTGGGATGCTTTCTGAAGCATATACTTACTTTGTCTTGGCCCAAATTGAGATGGCATTTGGAAGGTTTGAGAATGCAGTTTCTTCTGCTGAGAAAGCTGGAAAGATTGATCCCCGAAACCTAGAAGTTGCGTCGCTGCTTCAAAATGTGCGAATGGTGGTGAGAGCTCGTGCCCGTGGCAATGATCTCTTCAAGTCTGAAAGGTTCACTGAAGCGTGCTTAGCTTATGGTGATGGTCTGAGGCTTGATCCTTCAAACTCTGTTCTATATTGCAACAGAGCAGCTTGCTGGTTTAAGCTTGGGATGTGGGAGCATTCCATTGAAGACTGCAACCAGGCCCTATGTATTAAACCCAATTACACAAAAGCTCTTCTTCGAAGGGCTGCATCAAACAGCAAGCTAGAAAGATGGGTCGATGCTGCTAGAGACTATGAGATCTTGAGGAGGGAGCTTCCTGATGACAATGAAGTTGCTGAATCATTGTTTCATGCTCAAGTTGCATTGAAAAAGTCTCGTGGGGAAGAAGTGCATAATATGAAGTTTGGGGGTGAAGTAGAAGAAATATTGGGTCTTGAGCAGTTCAGAGCTGCAATATGTTTACCAGGTGTCTCCGTGGTCCATTTCAAAGCAGCATCTAATTTGCAATGCAAGCAAATATCACCTTTCGTGGACACGCTCTGTGGCCGCTACCCATCCATAAATTTCCTCAAGGTTGACATTGAAGAAATCCCAGCAGTTGCGAACATTGAAAATGTGAAGATTGTACCAACATTCAAGATATACAAAAATGGTAGCCGAGTGAAGGAAATGGTGTGCCCCAGTCGCGAAATGTTAGAACACTCAGTCAGGCATTATAGCTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0006950 GO:0006970 GO:0008150 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0010033 GO:0010646 GO:0010647 GO:0023051 GO:0023056 GO:0033993 GO:0042221 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0065007 GO:0097305 GO:1901419 GO:1901421 GO:1901700 GO:1905957 GO:1905959

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_1 TPR_11 TPR_16 TPR_19 TPR_2 TPR_8 Thioredoxin

Protein Analysis

696

Amino Acids

75.24

Weight (kDa)

8.99

Isoelectric Point (pI)

48.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_16	PF13432	230 - 290	8.2e-08	Tetratricopeptide repeat
TPR_11	PF13414	231 - 272	7.5e-06	TPR repeat
TPR_1	PF00515	497 - 528	1.2e-06	Tetratricopeptide repeat
Thioredoxin	PF00085	602 - 686	2.4e-11	Thioredoxin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006030)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53300
fragaria_vesca	FvH4_3g18510 FvH4_3g18510
malus_domestica	MD03G1241500.v1.1 MD11G1260800.v1.1 MD15G1393600.v1.1
prunus_persica	Prupe.4G167400_v2.0.a1 Prupe.4G167400_v2.0.a1 Prupe.4G167400_v2.0.a1
pyrus_communis	pycom03g18830 pycom11g23020
rosa_chinensis	RchiOBHm_Chr5g0031271
rosa_laevigata	RLG00000033297
rosa_multiflora	Rmu_co8169312.1_g000001 Rmu_sc0006236.1_g000002 Rmu_sc0010698.1_g000009 Rmu_sc0027117.1_g000001
rosa_roxburghii	Rroxscaffold_1G00049020
rosa_rugosa	Rorug05G0123400
rosa_samantha	Rh5AG216900 Rh5BG216400 Rh5BG505500 Rh5CG240100 Rh5CG529200 Rh5DG221600 Rh7DG001600
rosa_wichuraiana	Rw5G019840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	910
Acc36I	ACCTGC	1 cut(s)	910
AccB1I	GGYRCC	1 cut(s)	590
AccB7I	CCANNNNNTGG	1 cut(s)	892
AccBSI	CCGCTC	2 cut(s)	153, 1124
AccI	GTMKAC	1 cut(s)	39
AccII	CGCG	3 cut(s)	572, 747, 2049
AccIII	TCCGGA	2 cut(s)	194, 670
AclWI	GGATC	9 cut(s)	205, 351, 466, 662, 675, 857, 870, 1328, 1466
AcoI	YGGCCR	4 cut(s)	544, 576, 765, 1906
AcsI	RAATTY	1 cut(s)	1924
AcuI	CTGAAG	2 cut(s)	1260, 1455
AcyI	GRCGYC	2 cut(s)	36, 591
AdeI	CACNNNGTG	1 cut(s)	1034
AfaI	GTAC	2 cut(s)	1021, 1989
AfiI	CCNNNNNNNGG	7 cut(s)	252, 481, 796, 813, 872, 892, 2026
AgeI	ACCGGT	1 cut(s)	806
AjiI	CACGTC	1 cut(s)	1031
AjnI	CCWGG	5 cut(s)	31, 932, 952, 1557, 1825
Alw21I	GWGCWC	7 cut(s)	294, 404, 506, 611, 702, 883, 1393
Alw26I	GTCTC	3 cut(s)	1644, 1740, 1837
AlwI	GGATC	9 cut(s)	205, 351, 466, 662, 675, 857, 870, 1328, 1466
Ama87I	CYCGRG	2 cut(s)	250, 391
Aor13HI	TCCGGA	2 cut(s)	194, 670
AoxI	GGCC	9 cut(s)	84, 218, 254, 544, 576, 765, 1263, 1560, 1906
ApaI	GGGCCC	2 cut(s)	222, 258
ApoI	RAATTY	1 cut(s)	1924
AsiGI	ACCGGT	1 cut(s)	806
AspLEI	GCGC	3 cut(s)	572, 593, 749
AspS9I	GGNCC	8 cut(s)	218, 219, 243, 254, 255, 1264, 1561, 1840
AsuC2I	CCSGG	8 cut(s)	13, 227, 328, 345, 448, 466, 529, 791
AsuHPI	GGTGA	8 cut(s)	616, 691, 844, 875, 1396, 1466, 1784, 1875
AsuII	TTCGAA	1 cut(s)	1600
AvaI	CYCGRG	2 cut(s)	250, 391
AvaII	GGWCC	2 cut(s)	243, 1840
BaeGI	GKGCMC	4 cut(s)	222, 258, 1399, 2042
BamHI	GGATCC	2 cut(s)	667, 862
BanI	GGYRCC	1 cut(s)	590
BauI	CACGAG	2 cut(s)	1392, 1737
BbsI	GAAGAC	1 cut(s)	1554
Bbv12I	GWGCWC	7 cut(s)	294, 404, 506, 611, 702, 883, 1393
BccI	CCATC	5 cut(s)	469, 1270, 1451, 1626, 1924
BceAI	ACGGC	2 cut(s)	395, 559
BcgI	CGANNNNNNTGC	2 cut(s)	421, 455
BciT130I	CCWGG	5 cut(s)	33, 934, 954, 1559, 1827
BcnI	CCSGG	8 cut(s)	13, 227, 328, 345, 448, 466, 529, 791
BcoDI	GTCTC	3 cut(s)	1644, 1740, 1837
BfaI	CTAG	4 cut(s)	812, 1346, 1625, 1647
BfmI	CTRYAG	2 cut(s)	703, 959
BfoI	RGCGCY	1 cut(s)	594
BfuAI	ACCTGC	1 cut(s)	910
BglI	GCCNNNNNGGC	2 cut(s)	599, 773
BglII	AGATCT	1 cut(s)	1659
BlpI	GCTNAGC	1 cut(s)	1444
Bme18I	GGWCC	2 cut(s)	243, 1840
BmeT110I	CYCGRG	2 cut(s)	250, 391
BmgBI	CACGTC	1 cut(s)	1031
BmgT120I	GGNCC	8 cut(s)	218, 219, 243, 254, 255, 1264, 1561, 1840
BmrI	ACTGGG	1 cut(s)	2037
BmsI	GCATC	9 cut(s)	949, 958, 1015, 1015, 1147, 1221, 1619, 1630, 1865
BmuI	ACTGGG	1 cut(s)	2037
BoxI	GACNNNNGTC	1 cut(s)	312
BpiI	GAAGAC	1 cut(s)	1554
BpmI	CTGGAG	5 cut(s)	169, 286, 490, 595, 1107
Bpu1102I	GCTNAGC	1 cut(s)	1444
Bpu14I	TTCGAA	1 cut(s)	1600
BpuEI	CTTGAG	5 cut(s)	461, 1684, 1701, 1817, 1916
BpuMI	CCSGG	8 cut(s)	13, 227, 328, 345, 448, 466, 529, 791
BsaHI	GRCGYC	2 cut(s)	36, 591
BsaJI	CCNNGG	4 cut(s)	547, 597, 1399, 1836
BsaWI	WCCGGW	4 cut(s)	194, 670, 780, 806
BsaXI	ACNNNNNCTCC	2 cut(s)	266, 296
Bsc4I	CCNNNNNNNGG	7 cut(s)	252, 481, 796, 813, 872, 892, 2026
Bse118I	RCCGGY	1 cut(s)	806
Bse1I	ACTGG	2 cut(s)	186, 2043
Bse3DI	GCAATG	2 cut(s)	1411, 1874
BseAI	TCCGGA	2 cut(s)	194, 670
BseBI	CCWGG	5 cut(s)	33, 934, 954, 1559, 1827
BseDI	CCNNGG	4 cut(s)	547, 597, 1399, 1836
BseGI	GGATG	5 cut(s)	461, 973, 1236, 1533, 1916
BseLI	CCNNNNNNNGG	7 cut(s)	252, 481, 796, 813, 872, 892, 2026
BseMI	GCAATG	2 cut(s)	1411, 1874
BseMII	CTCAG	5 cut(s)	65, 966, 1305, 1454, 2079
BseNI	ACTGG	2 cut(s)	186, 2043
BseRI	GAGGAG	6 cut(s)	34, 394, 689, 860, 1198, 1681
BseSI	GKGCMC	4 cut(s)	222, 258, 1399, 2042
BseYI	CCCAGC	4 cut(s)	689, 820, 1104, 1954
Bsh1236I	CGCG	3 cut(s)	572, 747, 2049
Bsh1285I	CGRYCG	2 cut(s)	58, 447
BshFI	GGCC	9 cut(s)	86, 220, 256, 546, 578, 767, 1265, 1562, 1908
BshNI	GGYRCC	1 cut(s)	590
BshTI	ACCGGT	1 cut(s)	806
BsiEI	CGRYCG	2 cut(s)	58, 447
BsiHKAI	GWGCWC	7 cut(s)	294, 404, 506, 611, 702, 883, 1393
BsiHKCI	CYCGRG	2 cut(s)	250, 391
BslFI	GGGAC	2 cut(s)	300, 544
BslI	CCNNNNNNNGG	7 cut(s)	252, 481, 796, 813, 872, 892, 2026
BsmAI	GTCTC	3 cut(s)	1644, 1740, 1837
BsmFI	GGGAC	2 cut(s)	300, 544
BsmI	GAATGC	2 cut(s)	1303, 1537
BsnI	GGCC	9 cut(s)	86, 220, 256, 546, 578, 767, 1265, 1562, 1908
BsoBI	CYCGRG	2 cut(s)	250, 391
Bsp119I	TTCGAA	1 cut(s)	1600
Bsp120I	GGGCCC	2 cut(s)	218, 254
Bsp13I	TCCGGA	2 cut(s)	194, 670
Bsp1407I	TGTACA	1 cut(s)	1019
Bsp1720I	GCTNAGC	1 cut(s)	1444
Bsp68I	TCGCGA	1 cut(s)	2049
BspANI	GGCC	9 cut(s)	86, 220, 256, 546, 578, 767, 1265, 1562, 1908
BspCNI	CTCAG	5 cut(s)	66, 967, 1306, 1455, 2078
BspEI	TCCGGA	2 cut(s)	194, 670
BspFNI	CGCG	3 cut(s)	572, 747, 2049
BspMAI	CTGCAG	1 cut(s)	963
BspMI	ACCTGC	1 cut(s)	910
BspPI	GGATC	9 cut(s)	205, 351, 466, 662, 675, 857, 870, 1328, 1466
BspQI	GCTCTTC	1 cut(s)	1599
BspT104I	TTCGAA	1 cut(s)	1600
BspT107I	GGYRCC	1 cut(s)	590
BsrBI	CCGCTC	2 cut(s)	153, 1124
BsrDI	GCAATG	2 cut(s)	1411, 1874
BsrFI	RCCGGY	1 cut(s)	806
BsrGI	TGTACA	1 cut(s)	1019
BsrI	ACTGG	2 cut(s)	186, 2043
BssAI	RCCGGY	1 cut(s)	806
BssECI	CCNNGG	4 cut(s)	547, 597, 1399, 1836
BssNI	GRCGYC	2 cut(s)	36, 591
BssSI	CACGAG	2 cut(s)	1392, 1737
Bst2BI	CACGAG	2 cut(s)	1392, 1737
Bst2UI	CCWGG	5 cut(s)	33, 934, 954, 1559, 1827
Bst4CI	ACNGT	1 cut(s)	890
Bst6I	CTCTTC	6 cut(s)	233, 641, 677, 703, 1418, 1599
BstACI	GRCGYC	2 cut(s)	36, 591
BstAUI	TGTACA	1 cut(s)	1019
BstBI	TTCGAA	1 cut(s)	1600
BstC8I	GCNNGC	7 cut(s)	122, 162, 290, 1441, 1510, 1622, 1874
BstDEI	CTNAG	8 cut(s)	74, 908, 975, 1218, 1314, 1444, 1463, 2065
BstDSI	CCRYGG	3 cut(s)	547, 1399, 1836
BstF5I	GGATG	5 cut(s)	461, 973, 1236, 1533, 1916
BstFNI	CGCG	3 cut(s)	572, 747, 2049
BstH2I	RGCGCY	1 cut(s)	594
BstHHI	GCGC	3 cut(s)	572, 593, 749
BstMAI	GTCTC	3 cut(s)	1644, 1740, 1837
BstMCI	CGRYCG	2 cut(s)	58, 447
BstNI	CCWGG	5 cut(s)	33, 934, 954, 1559, 1827
BstPAI	GACNNNNGTC	1 cut(s)	312
BstSFI	CTRYAG	2 cut(s)	703, 959
BstSLI	GKGCMC	4 cut(s)	222, 258, 1399, 2042
BstUI	CGCG	3 cut(s)	572, 747, 2049
BstV2I	GAAGAC	1 cut(s)	1554
BstX2I	RGATCY	5 cut(s)	356, 471, 667, 862, 1659
BstXI	CCANNNNNNTGG	1 cut(s)	155
BstYI	RGATCY	5 cut(s)	356, 471, 667, 862, 1659
BsuRI	GGCC	9 cut(s)	86, 220, 256, 546, 578, 767, 1265, 1562, 1908
BtgI	CCRYGG	3 cut(s)	547, 1399, 1836
BtrI	CACGTC	1 cut(s)	1031
BtsCI	GGATG	5 cut(s)	461, 973, 1236, 1533, 1916
BtsI	GCAGTG	1 cut(s)	165
BtsIMutI	CAGTG	3 cut(s)	71, 165, 1431
BtuMI	TCGCGA	1 cut(s)	2049
BveI	ACCTGC	1 cut(s)	910
Cac8I	GCNNGC	7 cut(s)	122, 162, 290, 1441, 1510, 1622, 1874
CfoI	GCGC	3 cut(s)	572, 593, 749
Cfr10I	RCCGGY	1 cut(s)	806
Cfr13I	GGNCC	8 cut(s)	218, 219, 243, 254, 255, 1264, 1561, 1840
CseI	GACGC	3 cut(s)	25, 574, 1344
CsiI	ACCWGGT	1 cut(s)	1825
Csp6I	GTAC	2 cut(s)	1020, 1988
CspAI	ACCGGT	1 cut(s)	806
CviAII	CATG	1 cut(s)	1712
CviQI	GTAC	2 cut(s)	1020, 1988
DdeI	CTNAG	8 cut(s)	74, 908, 975, 1218, 1314, 1444, 1463, 2065
DinI	GGCGCC	1 cut(s)	592
DraIII	CACNNNGTG	1 cut(s)	1034
EaeI	YGGCCR	4 cut(s)	544, 576, 765, 1906
Eam1104I	CTCTTC	6 cut(s)	233, 641, 677, 703, 1418, 1599
EarI	CTCTTC	6 cut(s)	233, 641, 677, 703, 1418, 1599
EciI	GGCGGA	3 cut(s)	361, 397, 648
Ecl136II	GAGCTC	6 cut(s)	292, 402, 504, 609, 881, 1391
Eco47I	GGWCC	2 cut(s)	243, 1840
Eco53kI	GAGCTC	6 cut(s)	292, 402, 504, 609, 881, 1391
Eco57I	CTGAAG	2 cut(s)	1260, 1455
Eco88I	CYCGRG	2 cut(s)	250, 391
EcoICRI	GAGCTC	6 cut(s)	292, 402, 504, 609, 881, 1391
EcoO109I	RGGNCCY	2 cut(s)	254, 1561
EcoRII	CCWGG	5 cut(s)	31, 932, 952, 1557, 1825
EgeI	GGCGCC	1 cut(s)	592
EheI	GGCGCC	1 cut(s)	592
FaeI	CATG	1 cut(s)	1715
FalI	AAGNNNNNCTT	4 cut(s)	83, 115, 1581, 1613
FaqI	GGGAC	2 cut(s)	300, 544
FatI	CATG	1 cut(s)	1711
FauI	CCCGC	2 cut(s)	475, 555
FauNDI	CATATG	1 cut(s)	455
FblI	GTMKAC	1 cut(s)	39
FokI	GGATG	5 cut(s)	448, 980, 1243, 1540, 1903
FspBI	CTAG	4 cut(s)	812, 1346, 1625, 1647
GlaI	GCGC	3 cut(s)	571, 592, 748
GsaI	CCCAGC	4 cut(s)	693, 824, 1108, 1958
GsuI	CTGGAG	5 cut(s)	169, 286, 490, 595, 1107
HaeII	RGCGCY	1 cut(s)	594
HaeIII	GGCC	9 cut(s)	86, 220, 256, 546, 578, 767, 1265, 1562, 1908
HgaI	GACGC	3 cut(s)	25, 574, 1344
HhaI	GCGC	3 cut(s)	572, 593, 749
Hin1I	GRCGYC	2 cut(s)	36, 591
Hin1II	CATG	1 cut(s)	1715
Hin6I	GCGC	3 cut(s)	570, 591, 747
HinP1I	GCGC	3 cut(s)	570, 591, 747
HincII	GTYRAC	2 cut(s)	40, 1939
HindII	GTYRAC	2 cut(s)	40, 1939
HindIII	AAGCTT	1 cut(s)	1520
HinfI	GANTC	7 cut(s)	41, 68, 142, 496, 1070, 1163, 1700
HphI	GGTGA	8 cut(s)	616, 691, 844, 875, 1396, 1466, 1784, 1875
Hpy166II	GTNNAC	7 cut(s)	40, 415, 925, 1431, 1823, 1894, 1939
Hpy188III	TCNNGA	9 cut(s)	195, 507, 612, 671, 1663, 1679, 1796, 1999, 2048
Hpy8I	GTNNAC	7 cut(s)	40, 415, 925, 1431, 1823, 1894, 1939
Hpy99I	CGWCG	6 cut(s)	41, 424, 518, 590, 1035, 1360
HpyAV	CCTTC	4 cut(s)	1281, 1485, 1596, 2020
HpyCH4III	ACNGT	1 cut(s)	890
HpyCH4IV	ACGT	2 cut(s)	516, 1030
HpyF3I	CTNAG	8 cut(s)	74, 908, 975, 1218, 1314, 1444, 1463, 2065
HpySE526I	ACGT	2 cut(s)	516, 1030
Hsp92I	GRCGYC	2 cut(s)	36, 591
Hsp92II	CATG	1 cut(s)	1715
HspAI	GCGC	3 cut(s)	570, 591, 747
KasI	GGCGCC	1 cut(s)	590
Kpn2I	TCCGGA	2 cut(s)	194, 670
LguI	GCTCTTC	1 cut(s)	1599
LweI	GCATC	9 cut(s)	949, 958, 1015, 1015, 1147, 1221, 1619, 1630, 1865
MabI	ACCWGGT	1 cut(s)	1825
MaeI	CTAG	4 cut(s)	812, 1346, 1625, 1647
MaeII	ACGT	2 cut(s)	516, 1030
MaeIII	GTNAC	2 cut(s)	65, 978
MbiI	CCGCTC	2 cut(s)	153, 1124
MfeI	CAATTG	1 cut(s)	750
MflI	RGATCY	5 cut(s)	356, 471, 667, 862, 1659
Mly113I	GGCGCC	1 cut(s)	591
MlyI	GAGTC	4 cut(s)	35, 62, 136, 1064
MmeI	TCCRAC	2 cut(s)	191, 840
MroI	TCCGGA	2 cut(s)	194, 670
MseI	TTAA	5 cut(s)	231, 383, 1011, 1518, 1572
MslI	CAYNNNNRTG	1 cut(s)	945
MspA1I	CMGCKG	1 cut(s)	136
MunI	CAATTG	1 cut(s)	750
Mva1269I	GAATGC	2 cut(s)	1303, 1537
MvaI	CCWGG	5 cut(s)	33, 934, 954, 1559, 1827
MvnI	CGCG	3 cut(s)	572, 747, 2049
NarI	GGCGCC	1 cut(s)	591
NciI	CCSGG	8 cut(s)	13, 227, 328, 345, 448, 466, 529, 791
NdeI	CATATG	1 cut(s)	455
NlaIII	CATG	1 cut(s)	1715
NmeAIII	GCCGAG	2 cut(s)	450, 2045
NmuCI	GTSAC	1 cut(s)	65
NruI	TCGCGA	1 cut(s)	2049
NspV	TTCGAA	1 cut(s)	1600
PaqCI	CACCTGC	1 cut(s)	910
PciSI	GCTCTTC	1 cut(s)	1599
PcsI	WCGNNNNNNNCGW	2 cut(s)	428, 594
PctI	GAATGC	2 cut(s)	1303, 1537
PfeI	GAWTC	3 cut(s)	496, 1163, 1700
PflMI	CCANNNNNTGG	1 cut(s)	892
PfoI	TCCNGGA	3 cut(s)	11, 464, 527
PinAI	ACCGGT	1 cut(s)	806
Ple19I	CGATCG	1 cut(s)	58
PleI	GAGTC	4 cut(s)	35, 62, 136, 1064
PluTI	GGCGCC	1 cut(s)	594
PpsI	GAGTC	4 cut(s)	35, 62, 136, 1064
PshAI	GACNNNNGTC	1 cut(s)	312
Psp124BI	GAGCTC	6 cut(s)	294, 404, 506, 611, 883, 1393
Psp6I	CCWGG	5 cut(s)	31, 932, 952, 1557, 1825
PspFI	CCCAGC	4 cut(s)	689, 820, 1104, 1954
PspGI	CCWGG	5 cut(s)	31, 932, 952, 1557, 1825
PspOMI	GGGCCC	2 cut(s)	218, 254
PspPI	GGNCC	8 cut(s)	218, 219, 243, 254, 255, 1264, 1561, 1840
PstI	CTGCAG	1 cut(s)	963
PsuI	RGATCY	5 cut(s)	356, 471, 667, 862, 1659
PvuI	CGATCG	1 cut(s)	58
RruI	TCGCGA	1 cut(s)	2049
RsaI	GTAC	2 cut(s)	1021, 1989
RsaNI	GTAC	2 cut(s)	1020, 1988
RseI	CAYNNNNRTG	1 cut(s)	945
SacI	GAGCTC	6 cut(s)	294, 404, 506, 611, 883, 1393
SalI	GTCGAC	1 cut(s)	38
SapI	GCTCTTC	1 cut(s)	1599
SaqAI	TTAA	5 cut(s)	231, 383, 1011, 1518, 1572
Sau96I	GGNCC	8 cut(s)	218, 219, 243, 254, 255, 1264, 1561, 1840
SchI	GAGTC	4 cut(s)	35, 62, 136, 1064
SexAI	ACCWGGT	1 cut(s)	1825
SfaNI	GCATC	9 cut(s)	949, 958, 1015, 1015, 1147, 1221, 1619, 1630, 1865
SfcI	CTRYAG	2 cut(s)	703, 959
SfoI	GGCGCC	1 cut(s)	592
SfuI	TTCGAA	1 cut(s)	1600
SinI	GGWCC	2 cut(s)	243, 1840
SmiMI	CAYNNNNRTG	1 cut(s)	945
SmlI	CTYRAG	5 cut(s)	476, 1663, 1716, 1796, 1931
SmoI	CTYRAG	5 cut(s)	476, 1663, 1716, 1796, 1931
SspDI	GGCGCC	1 cut(s)	590
SspI	AATATT	1 cut(s)	1788
SspMI	CTAG	4 cut(s)	812, 1346, 1625, 1647
SstI	GAGCTC	6 cut(s)	294, 404, 506, 611, 883, 1393
TaaI	ACNGT	1 cut(s)	890
TaiI	ACGT	2 cut(s)	519, 1033
TaqI	TCGA	5 cut(s)	39, 111, 431, 1600, 1638
TatI	WGTACW	1 cut(s)	1019
TfiI	GAWTC	3 cut(s)	496, 1163, 1700
Tru1I	TTAA	5 cut(s)	231, 383, 1011, 1518, 1572
Tru9I	TTAA	5 cut(s)	231, 383, 1011, 1518, 1572
TscAI	CASTG	3 cut(s)	78, 172, 1438
TseFI	GTSAC	1 cut(s)	65
Tsp45I	GTSAC	1 cut(s)	65
TspDTI	ATGAA	3 cut(s)	1700, 1704, 1775
TspGWI	ACGGA	3 cut(s)	53, 997, 1825
TspRI	CASTG	3 cut(s)	78, 172, 1438
Van91I	CCANNNNNTGG	1 cut(s)	892
VpaK11BI	GGWCC	2 cut(s)	243, 1840
XapI	RAATTY	1 cut(s)	1924
XmiI	GTMKAC	1 cut(s)	39
XspI	CTAG	4 cut(s)	812, 1346, 1625, 1647

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.