Belongs to the plant LTP family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G22600 AT4G14815 |
| fragaria_vesca | FvH4_4g16110 FvH4_4g16110 |
| malus_domestica | MD03G1261700.v1.1 MD11G1282100.v1.1 MD11G1282400.v1.1 MD13G1196200.v1.1 MD16G1196700.v1.1 |
| prunus_persica | Prupe.1G016900_v2.0.a1 Prupe.8G238000_v2.0.a1 |
| pyrus_communis | pycom11g25010 pycom13g16830 pycom16g16550 |
| rosa_laevigata | RLG00000008054 |
| rosa_multiflora | Rmu_sc0001194.1_g000008 Rmu_sc0004599.1_g000012 Rmu_sc0023626.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00359460 |
| rosa_rugosa | Rorug04G0136100 Rorug04G0136100 |
| rosa_samantha | Rh4AG196700 Rh4BG195300 Rh4CG207500 Rh4DG194600 |
| rosa_wichuraiana | Rw4G016730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 270 |
| AciI | CCGC | 1 cut(s) | 262 |
| AdeI | CACNNNGTG | 1 cut(s) | 198 |
| AfaI | GTAC | 1 cut(s) | 320 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 169 |
| AgsI | TTSAA | 1 cut(s) | 42 |
| AluBI | AGCT | 1 cut(s) | 147 |
| AluI | AGCT | 1 cut(s) | 147 |
| Alw26I | GTCTC | 1 cut(s) | 12 |
| AoxI | GGCC | 1 cut(s) | 220 |
| BccI | CCATC | 1 cut(s) | 115 |
| BcoDI | GTCTC | 1 cut(s) | 12 |
| BisI | GCNGC | 1 cut(s) | 262 |
| BlsI | GCNGC | 1 cut(s) | 263 |
| BsaJI | CCNNGG | 1 cut(s) | 223 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 9, 39 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 169 |
| Bse3DI | GCAATG | 2 cut(s) | 157, 251 |
| BseDI | CCNNGG | 1 cut(s) | 223 |
| BseGI | GGATG | 1 cut(s) | 101 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 169 |
| BseMI | GCAATG | 2 cut(s) | 157, 251 |
| BseMII | CTCAG | 4 cut(s) | 159, 164, 190, 231 |
| BseRI | GAGGAG | 1 cut(s) | 313 |
| BseYI | CCCAGC | 1 cut(s) | 264 |
| BshFI | GGCC | 1 cut(s) | 222 |
| BslFI | GGGAC | 2 cut(s) | 52, 234 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 169 |
| BsmAI | GTCTC | 1 cut(s) | 12 |
| BsmFI | GGGAC | 2 cut(s) | 52, 234 |
| BsnI | GGCC | 1 cut(s) | 222 |
| BspACI | CCGC | 1 cut(s) | 262 |
| BspANI | GGCC | 1 cut(s) | 222 |
| BspCNI | CTCAG | 4 cut(s) | 160, 163, 189, 230 |
| BsrDI | GCAATG | 2 cut(s) | 157, 251 |
| BssECI | CCNNGG | 1 cut(s) | 223 |
| BssNAI | GTATAC | 1 cut(s) | 271 |
| BssT1I | CCWWGG | 1 cut(s) | 223 |
| Bst1107I | GTATAC | 1 cut(s) | 271 |
| Bst4CI | ACNGT | 2 cut(s) | 129, 290 |
| BstC8I | GCNNGC | 1 cut(s) | 242 |
| BstDEI | CTNAG | 5 cut(s) | 150, 168, 176, 217, 327 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 167 |
| BstF5I | GGATG | 1 cut(s) | 101 |
| BstMAI | GTCTC | 1 cut(s) | 12 |
| BstNSI | RCATGY | 1 cut(s) | 67 |
| BstZ17I | GTATAC | 1 cut(s) | 271 |
| BsuRI | GGCC | 1 cut(s) | 222 |
| BtsCI | GGATG | 1 cut(s) | 101 |
| BtsIMutI | CAGTG | 1 cut(s) | 184 |
| Cac8I | GCNNGC | 1 cut(s) | 242 |
| Csp6I | GTAC | 1 cut(s) | 319 |
| CviAII | CATG | 3 cut(s) | 64, 72, 117 |
| CviJI | RGCY | 6 cut(s) | 5, 147, 154, 222, 228, 261 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 147, 154, 222, 228, 261 |
| CviQI | GTAC | 1 cut(s) | 319 |
| DdeI | CTNAG | 5 cut(s) | 150, 168, 176, 217, 327 |
| DraIII | CACNNNGTG | 1 cut(s) | 198 |
| Eco130I | CCWWGG | 1 cut(s) | 223 |
| Eco147I | AGGCCT | 1 cut(s) | 222 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 167 |
| EcoT14I | CCWWGG | 1 cut(s) | 223 |
| ErhI | CCWWGG | 1 cut(s) | 223 |
| FaeI | CATG | 3 cut(s) | 67, 75, 120 |
| FaiI | YATR | 5 cut(s) | 65, 73, 84, 118, 271 |
| FaqI | GGGAC | 2 cut(s) | 52, 234 |
| FatI | CATG | 3 cut(s) | 63, 71, 116 |
| FblI | GTMKAC | 1 cut(s) | 270 |
| Fnu4HI | GCNGC | 1 cut(s) | 262 |
| FokI | GGATG | 1 cut(s) | 88 |
| Fsp4HI | GCNGC | 1 cut(s) | 262 |
| GluI | GCNGC | 1 cut(s) | 262 |
| GsaI | CCCAGC | 1 cut(s) | 268 |
| HaeIII | GGCC | 1 cut(s) | 222 |
| Hin1II | CATG | 3 cut(s) | 67, 75, 120 |
| HinfI | GANTC | 1 cut(s) | 215 |
| Hpy166II | GTNNAC | 2 cut(s) | 203, 271 |
| Hpy188I | TCNGA | 2 cut(s) | 169, 214 |
| Hpy8I | GTNNAC | 2 cut(s) | 203, 271 |
| HpyAV | CCTTC | 1 cut(s) | 8 |
| HpyCH4III | ACNGT | 2 cut(s) | 129, 290 |
| HpyCH4V | TGCA | 2 cut(s) | 48, 244 |
| HpyF3I | CTNAG | 5 cut(s) | 150, 168, 176, 217, 327 |
| Hsp92II | CATG | 3 cut(s) | 67, 75, 120 |
| LpnPI | CCDG | 4 cut(s) | 75, 204, 248, 250 |
| MaeIII | GTNAC | 2 cut(s) | 85, 284 |
| MboII | GAAGA | 4 cut(s) | 30, 102, 178, 181 |
| MluCI | AATT | 3 cut(s) | 57, 79, 255 |
| MlyI | GAGTC | 1 cut(s) | 209 |
| MnlI | CCTC | 3 cut(s) | 124, 163, 173 |
| MseI | TTAA | 1 cut(s) | 78 |
| MspA1I | CMGCKG | 1 cut(s) | 264 |
| NlaIII | CATG | 3 cut(s) | 67, 75, 120 |
| NspI | RCATGY | 1 cut(s) | 67 |
| PceI | AGGCCT | 1 cut(s) | 222 |
| PkrI | GCNGC | 1 cut(s) | 263 |
| PleI | GAGTC | 1 cut(s) | 209 |
| PpsI | GAGTC | 1 cut(s) | 209 |
| PspFI | CCCAGC | 1 cut(s) | 264 |
| RsaI | GTAC | 1 cut(s) | 320 |
| RsaNI | GTAC | 1 cut(s) | 319 |
| SaqAI | TTAA | 1 cut(s) | 78 |
| SatI | GCNGC | 1 cut(s) | 262 |
| SchI | GAGTC | 1 cut(s) | 209 |
| SetI | ASST | 2 cut(s) | 149, 174 |
| Sse9I | AATT | 3 cut(s) | 57, 79, 255 |
| SseBI | AGGCCT | 1 cut(s) | 222 |
| SsiI | CCGC | 1 cut(s) | 262 |
| StuI | AGGCCT | 1 cut(s) | 222 |
| StyI | CCWWGG | 1 cut(s) | 223 |
| TaaI | ACNGT | 2 cut(s) | 129, 290 |
| TasI | AATT | 3 cut(s) | 57, 79, 255 |
| TatI | WGTACW | 1 cut(s) | 318 |
| TauI | GCSGC | 1 cut(s) | 264 |
| Tru1I | TTAA | 1 cut(s) | 78 |
| Tru9I | TTAA | 1 cut(s) | 78 |
| TscAI | CASTG | 1 cut(s) | 184 |
| TspDTI | ATGAA | 1 cut(s) | 293 |
| TspRI | CASTG | 1 cut(s) | 184 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 167 |
| XceI | RCATGY | 1 cut(s) | 67 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 261 |
| XmiI | GTMKAC | 1 cut(s) | 270 |