MD04G1050000.v1.1

Ethanolamine utilisation protein EutQ

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Reverse (-)
5902376 .. 5905208
2833 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1050000.v1.1.491

Sequence Viewer

Length: 435 bp
ATGTTTGAATTGATATCAAAGCAGTCGCTAATAATACTTCCTCTAATACTTGCAGGTGCGGTTTCTCTGTATCTCTCCGTCAATTTTACACAATCCAGACCAAAAGCAATCAGTCCATCTGGGTCTGAAGAAGGATCTCCCATGGCCGCCAACGAATTTGGTGTAACAGTTGACAAGAATCCTACTCAGTCCAAGCTCACTGAGCTTGGAATCTCAACTTGGCCCAAGTGGAGTTGTGGTCCGAGCAAATTTCCATGGTCATTCAGTGCCACAGAGACCATGTATCTGCTGGAGGGAAAAGTGAACGTTGAAGTTGATGGGAAAGAAGGATCGTTCACAATCGGGGCTGGTGATTTTGTTGTGTTCCCTAAAGGAATGAAGGTCACTTGGGATGTCATTGAAGCTGTGAACAAGCATTATAGCTTGGAAGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

145

Amino Acids

15.7

Weight (kDa)

5.05

Isoelectric Point (pI)

45.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cupin_3 PF05899 67 - 140 1.1e-25 EutQ-like cupin domain
EutQ PF06249 82 - 136 9.8e-06 Ethanolamine utilisation protein EutQ
Cupin_2 PF07883 91 - 126 6.2e-06 Cupin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012319)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 44
Acc36I ACCTGC 1 cut(s) 44
AciI CCGC 2 cut(s) 59, 147
AclI AACGTT 1 cut(s) 306
AclWI GGATC 2 cut(s) 142, 337
AcoI YGGCCR 1 cut(s) 144
AcsI RAATTY 2 cut(s) 155, 248
AcuI CTGAAG 1 cut(s) 147
AgsI TTSAA 3 cut(s) 8, 311, 401
AjuI GAANNNNNNNTTGG 2 cut(s) 202, 234
AluBI AGCT 4 cut(s) 196, 205, 404, 423
AluI AGCT 4 cut(s) 196, 205, 404, 423
Alw26I GTCTC 1 cut(s) 269
AlwI GGATC 2 cut(s) 142, 337
AoxI GGCC 2 cut(s) 144, 221
ApoI RAATTY 2 cut(s) 155, 248
AspS9I GGNCC 2 cut(s) 222, 239
AsuHPI GGTGA 1 cut(s) 362
AvaII GGWCC 1 cut(s) 239
BccI CCATC 2 cut(s) 124, 311
BcoDI GTCTC 1 cut(s) 269
BfuAI ACCTGC 1 cut(s) 44
BisI GCNGC 1 cut(s) 147
BlsI GCNGC 1 cut(s) 148
Bme18I GGWCC 1 cut(s) 239
BmgT120I GGNCC 2 cut(s) 222, 239
BpmI CTGGAG 1 cut(s) 311
BsaI GGTCTC 1 cut(s) 269
BsaJI CCNNGG 2 cut(s) 141, 254
BsaXI ACNNNNNCTCC 2 cut(s) 223, 253
BseDI CCNNGG 2 cut(s) 141, 254
BseGI GGATG 1 cut(s) 397
BseMII CTCAG 2 cut(s) 192, 200
BshFI GGCC 2 cut(s) 146, 223
BsmAI GTCTC 1 cut(s) 269
BsnI GGCC 2 cut(s) 146, 223
Bso31I GGTCTC 1 cut(s) 269
Bsp143I GATC 2 cut(s) 134, 329
Bsp19I CCATGG 2 cut(s) 141, 254
BspACI CCGC 2 cut(s) 59, 147
BspANI GGCC 2 cut(s) 146, 223
BspCNI CTCAG 2 cut(s) 193, 199
BspMI ACCTGC 1 cut(s) 44
BspPI GGATC 2 cut(s) 142, 337
BspTNI GGTCTC 1 cut(s) 269
BssECI CCNNGG 2 cut(s) 141, 254
BssMI GATC 2 cut(s) 134, 329
BssT1I CCWWGG 2 cut(s) 141, 254
Bst4CI ACNGT 1 cut(s) 169
Bst6I CTCTTC 1 cut(s) 423
BstDEI CTNAG 2 cut(s) 186, 201
BstDSI CCRYGG 2 cut(s) 141, 254
BstF5I GGATG 1 cut(s) 397
BstKTI GATC 2 cut(s) 137, 332
BstMAI GTCTC 1 cut(s) 269
BstMBI GATC 2 cut(s) 134, 329
BstMWI GCNNNNNNNGC 1 cut(s) 202
BstX2I RGATCY 1 cut(s) 134
BstYI RGATCY 1 cut(s) 134
BsuRI GGCC 2 cut(s) 146, 223
BtgI CCRYGG 2 cut(s) 141, 254
BtsCI GGATG 1 cut(s) 397
BtsIMutI CAGTG 2 cut(s) 198, 271
BveI ACCTGC 1 cut(s) 44
Cfr13I GGNCC 2 cut(s) 222, 239
CviAII CATG 3 cut(s) 142, 255, 280
CviJI RGCY 7 cut(s) 146, 196, 205, 223, 347, 404, 423
CviKI_1 RGCY 7 cut(s) 146, 196, 205, 223, 347, 404, 423
DdeI CTNAG 2 cut(s) 186, 201
DpnI GATC 2 cut(s) 136, 331
DpnII GATC 2 cut(s) 134, 329
EaeI YGGCCR 1 cut(s) 144
Eam1104I CTCTTC 1 cut(s) 423
EarI CTCTTC 1 cut(s) 423
Eco130I CCWWGG 2 cut(s) 141, 254
Eco31I GGTCTC 1 cut(s) 269
Eco32I GATATC 1 cut(s) 15
Eco47I GGWCC 1 cut(s) 239
Eco57I CTGAAG 1 cut(s) 147
EcoRV GATATC 1 cut(s) 15
EcoT14I CCWWGG 2 cut(s) 141, 254
ErhI CCWWGG 2 cut(s) 141, 254
FaeI CATG 3 cut(s) 145, 258, 283
FaiI YATR 4 cut(s) 143, 256, 281, 420
FatI CATG 3 cut(s) 141, 254, 279
Fnu4HI GCNGC 1 cut(s) 147
FokI GGATG 1 cut(s) 404
Fsp4HI GCNGC 1 cut(s) 147
GluI GCNGC 1 cut(s) 147
GsuI CTGGAG 1 cut(s) 311
HaeIII GGCC 2 cut(s) 146, 223
Hin1II CATG 3 cut(s) 145, 258, 283
HincII GTYRAC 1 cut(s) 172
HindII GTYRAC 1 cut(s) 172
HinfI GANTC 2 cut(s) 178, 210
HphI GGTGA 1 cut(s) 362
Hpy166II GTNNAC 4 cut(s) 172, 304, 336, 409
Hpy188I TCNGA 2 cut(s) 127, 243
Hpy188III TCNNGA 1 cut(s) 96
Hpy8I GTNNAC 4 cut(s) 172, 304, 336, 409
HpyAV CCTTC 3 cut(s) 125, 320, 373
HpyCH4III ACNGT 1 cut(s) 169
HpyCH4IV ACGT 1 cut(s) 306
HpyCH4V TGCA 1 cut(s) 53
HpyF10VI GCNNNNNNNGC 1 cut(s) 202
HpyF3I CTNAG 2 cut(s) 186, 201
HpySE526I ACGT 1 cut(s) 306
Hsp92II CATG 3 cut(s) 145, 258, 283
Kzo9I GATC 2 cut(s) 134, 329
LpnPI CCDG 5 cut(s) 39, 105, 109, 275, 333
MaeII ACGT 1 cut(s) 306
MaeIII GTNAC 2 cut(s) 163, 382
MalI GATC 2 cut(s) 136, 331
MboI GATC 2 cut(s) 134, 329
MboII GAAGA 1 cut(s) 140
MflI RGATCY 1 cut(s) 134
MluCI AATT 4 cut(s) 8, 82, 155, 248
MnlI CCTC 2 cut(s) 51, 286
MwoI GCNNNNNNNGC 1 cut(s) 202
NcoI CCATGG 2 cut(s) 141, 254
NdeII GATC 2 cut(s) 134, 329
NlaIII CATG 3 cut(s) 145, 258, 283
NmuCI GTSAC 1 cut(s) 382
PaqCI CACCTGC 1 cut(s) 44
PfeI GAWTC 2 cut(s) 178, 210
PkrI GCNGC 1 cut(s) 148
Psp1406I AACGTT 1 cut(s) 306
PspPI GGNCC 2 cut(s) 222, 239
PsuI RGATCY 1 cut(s) 134
SatI GCNGC 1 cut(s) 147
Sau3AI GATC 2 cut(s) 134, 329
Sau96I GGNCC 2 cut(s) 222, 239
SetI ASST 7 cut(s) 58, 198, 207, 309, 384, 406, 425
SinI GGWCC 1 cut(s) 239
Sse9I AATT 4 cut(s) 8, 82, 155, 248
SsiI CCGC 2 cut(s) 59, 147
StyI CCWWGG 2 cut(s) 141, 254
TaaI ACNGT 1 cut(s) 169
TaiI ACGT 1 cut(s) 309
TasI AATT 4 cut(s) 8, 82, 155, 248
TauI GCSGC 1 cut(s) 149
TfiI GAWTC 2 cut(s) 178, 210
TscAI CASTG 2 cut(s) 205, 271
TseFI GTSAC 1 cut(s) 382
Tsp45I GTSAC 1 cut(s) 382
TspDTI ATGAA 1 cut(s) 392
TspGWI ACGGA 1 cut(s) 67
TspRI CASTG 2 cut(s) 205, 271
VpaK11BI GGWCC 1 cut(s) 239
XapI RAATTY 2 cut(s) 155, 248
XcmI CCANNNNNNNNNTGG 1 cut(s) 286
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.