MD04G1069100.v1.1

molybdenum cofactor

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Forward (+)
9452841 .. 9454727
1887 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1069100.v1.1.491

Sequence Viewer

Length: 1887 bp
ATGCCCTCACCACCTTGCAGTAGAGAAGCCTCGGGGAGGAGCTGCTTACATGGTTGCTGCTTACACGGTGGAGCTTCATCCTCCTCCACCTATGGTGCTTCTTCAACTCCCAAATCAACAGAGAAAGTCAACATGTTCAGGTATGACTTCACACTTGCCATATCTTCTTCTCTCCACCCAAATACCCAATTCACCAATCACGAGTCCCTCCCTTCCCTCCATGAAGCCTTCTCTTCCTTCACCAAATCATTCCCACAATTTTACCAGACTGACCAATCTGACCTCATCAGAGCCCATCAATATTACCATCTCACCCTCTCCAACCATGTCTGCTTTGATTACATTGGACATTGCCTCTTCTCTTACTCTCAGTCTCAGCAACAAACACAATATAATTCCTCATCGTCTCAAATCCCTTCAACTTCCTCTTCCCCTCCTCCTCCTCAGTTGCTTCACTCCCAAGAACCATTGTTTTTCGACATTTCGTACAAGTCGGTAAACTTGCACACCCAAGTTTTGTATGGAGGGCAAGAATCAGAATTGGAGCTTCAAATGAGGAAAAGAATAATGGATTATATGAACATCTCCGAAAGCGATTACTCCATGGTTTTCACTGCCAATCAGTCATCCGCTTTCAAGCTTCTAGCCGACTCGTATCCCTTTCGCAACAATCCAAGTCTTTTGACTGTTTATGACTACAAGAATGAGGCAGTGGATGTGATGAAGGAGAGCTCAAAAAAGAAGGGAGGACGGATCATGTCCGCAGAGTTCTCATGGCCTAACATGAGAATTCAGTCGCGAAAATTGAGAAGACGGATTGGGAATGGTAACCAGACGAGGAAAAAGCAACGGGGGCTGTTTGTTTTCCCACTTCAATCGAGAGTGACAGGAGTGCGGTATTCGTATATGTGGATGAGCATAGCGCAGGAGAATGGTTGGCATGTTTTGCTTGATGCATGTTCATTGGGGCCCAAGGACATGGACAGTTTAGGCCTCTCACTCTTTAAGCCTGATTTTCTCATTTGCTCTTTCTTCAAAGTTTTTGGGGAAAACCCATCAGGGTTTGGTTGCCTGTTCGTCAAGAAATCCAGTGCCTCGGTCTTAAAGGATCCAACATTTGCTTCAAGTACAGGAATTGTGAGCCTTGTCCCGGCGTCAAAACGATCTGAATTTTCCGAGGAGTACTCAATTTATATGGACATGGAAACTGATCGAAAACAGTCCGAATTTGAAGCCTCGAAGTCCCATGAAAGCGAAGAAGTCTCCCTAAAGAAGAAGGAACATTTAGTTTCAGAAATTACGGAATTCGACGGAGAAGAATCCGATCAGTCTGTCAAATCAGATAACTCAGCGATCACATGCAAGGGCTTGGATCATGCCGATTCATTAGGTCTAGTACTGATTAGCCGAAGAGCAAGGTACTTGATCAACTGGCTAGTGAATGCATTGATGAGCCTTCAACATCCGCACTCACAATACGGCCATCAATTGGTCAGAATCTATGGACCAAAGATAGAATTTGATCGGGGACCAAGCTTGGCATTCAATGTGTTTGACTGGAAAGGAGAAAAGATTGATCCGTTGATCGTGCAAAAGCTAGCTGATCGAAACAACATTTCACTGAGTTACGGGATTTTGAACCACATTTTGTTCTCGGACAAGCACGAGCAAGAGAGGGAAACAAAGTTGGAGAAATGTACAAGTGATCAAGTGGAAGGAAGCAGTAGTGAAGGGATATCTGTGCTGACCGCTGCATTAGGGCTTTTGACAAACTTTGAAGACATTTACAGGCTTTGGGTATTTGTTTCAAGGTTTTTGGATGCAGATTTTGTGGAGAAGGAGAGATGGAGATACATGGCTCTTAATCAAAGGACTGTTGAGATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

629

Amino Acids

71.34

Weight (kDa)

6.59

Isoelectric Point (pI)

54.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1489
AccII CGCG 1 cut(s) 799
AciI CCGC 5 cut(s) 630, 762, 895, 1466, 1749
AclWI GGATC 5 cut(s) 761, 1103, 1116, 1380, 1571
AcoI YGGCCR 1 cut(s) 1480
AcsI RAATTY 5 cut(s) 789, 1169, 1226, 1304, 1517
AcyI GRCGYC 1 cut(s) 1154
AfaI GTAC 6 cut(s) 488, 1129, 1184, 1398, 1421, 1699
AfiI CCNNNNNNNGG 3 cut(s) 36, 1150, 1489
AflIII ACRYGT 1 cut(s) 132
AjuI GAANNNNNNNTTGG 2 cut(s) 1105, 1137
AluBI AGCT 8 cut(s) 42, 74, 547, 640, 732, 1536, 1597, 1601
AluI AGCT 8 cut(s) 42, 74, 547, 640, 732, 1536, 1597, 1601
Alw21I GWGCWC 1 cut(s) 734
Alw26I GTCTC 3 cut(s) 378, 411, 1267
AlwI GGATC 5 cut(s) 761, 1103, 1116, 1380, 1571
Ama87I CYCGRG 1 cut(s) 31
AoxI GGCC 4 cut(s) 776, 968, 991, 1480
ApaI GGGCCC 1 cut(s) 972
ApeKI GCWGC 3 cut(s) 42, 57, 1751
ApoI RAATTY 5 cut(s) 789, 1169, 1226, 1304, 1517
AspLEI GCGC 1 cut(s) 925
AspS9I GGNCC 4 cut(s) 968, 969, 1505, 1529
AsuC2I CCSGG 1 cut(s) 1151
AsuHPI GGTGA 3 cut(s) 184, 232, 304
AsuNHI GCTAGC 1 cut(s) 1597
AvaI CYCGRG 1 cut(s) 31
AvaII GGWCC 2 cut(s) 1505, 1529
BaeGI GKGCMC 1 cut(s) 972
BamHI GGATCC 1 cut(s) 1108
BanII GRGCYC 3 cut(s) 295, 734, 972
BauI CACGAG 2 cut(s) 200, 1664
BbsI GAAGAC 2 cut(s) 817, 1785
Bbv12I GWGCWC 1 cut(s) 734
BbvI GCAGC 3 cut(s) 29, 44, 1738
BccI CCATC 5 cut(s) 303, 315, 1063, 1491, 1839
BceAI ACGGC 1 cut(s) 1495
BciVI GTATCC 1 cut(s) 666
BclI TGATCA 2 cut(s) 1425, 1705
BcnI CCSGG 1 cut(s) 1151
BcoDI GTCTC 3 cut(s) 378, 411, 1267
BfaI CTAG 4 cut(s) 644, 1394, 1436, 1598
BfuI GTATCC 1 cut(s) 666
BisI GCNGC 3 cut(s) 43, 58, 1752
BlsI GCNGC 3 cut(s) 44, 59, 1753
BmcAI AGTACT 2 cut(s) 1184, 1398
Bme1390I CCNGG 1 cut(s) 1151
Bme18I GGWCC 2 cut(s) 1505, 1529
BmeT110I CYCGRG 1 cut(s) 31
BmgT120I GGNCC 4 cut(s) 968, 969, 1505, 1529
BmiI GGNNCC 4 cut(s) 969, 970, 1110, 1530
BmrFI CCNGG 1 cut(s) 1151
BmsI GCATC 2 cut(s) 943, 1810
BmtI GCTAGC 1 cut(s) 1601
BpiI GAAGAC 2 cut(s) 817, 1785
BplI GAGNNNNNCTC 2 cut(s) 1169, 1201
BpuMI CCSGG 1 cut(s) 1151
BsaHI GRCGYC 1 cut(s) 1154
BsaJI CCNNGG 5 cut(s) 30, 603, 972, 1095, 1176
Bsc4I CCNNNNNNNGG 3 cut(s) 36, 1150, 1489
Bse1I ACTGG 3 cut(s) 1089, 1436, 1562
Bse3DI GCAATG 1 cut(s) 349
BseDI CCNNGG 5 cut(s) 30, 603, 972, 1095, 1176
BseGI GGATG 6 cut(s) 77, 626, 721, 918, 1462, 1825
BseLI CCNNNNNNNGG 3 cut(s) 36, 1150, 1489
BseMI GCAATG 1 cut(s) 349
BseMII CTCAG 5 cut(s) 383, 389, 458, 1362, 1613
BseNI ACTGG 3 cut(s) 1089, 1436, 1562
BseRI GAGGAG 6 cut(s) 52, 73, 426, 429, 432, 1193
BseSI GKGCMC 1 cut(s) 972
BseXI GCAGC 3 cut(s) 29, 44, 1738
Bsh1236I CGCG 1 cut(s) 799
BshFI GGCC 4 cut(s) 778, 970, 993, 1482
BsiHKAI GWGCWC 1 cut(s) 734
BsiHKCI CYCGRG 1 cut(s) 31
BsiSI CCGG 1 cut(s) 1151
BslFI GGGAC 4 cut(s) 190, 1133, 1228, 1542
BslI CCNNNNNNNGG 3 cut(s) 36, 1150, 1489
BsmAI GTCTC 3 cut(s) 378, 411, 1267
BsmBI CGTCTC 1 cut(s) 411
BsmFI GGGAC 4 cut(s) 190, 1133, 1228, 1542
BsmI GAATGC 2 cut(s) 1447, 1541
BsnI GGCC 4 cut(s) 778, 970, 993, 1482
BsoBI CYCGRG 1 cut(s) 31
Bsp120I GGGCCC 1 cut(s) 968
Bsp1286I GDGCHC 3 cut(s) 295, 734, 972
Bsp1407I TGTACA 1 cut(s) 1697
Bsp19I CCATGG 1 cut(s) 603
Bsp68I TCGCGA 1 cut(s) 799
BspACI CCGC 5 cut(s) 630, 762, 895, 1466, 1749
BspANI GGCC 4 cut(s) 778, 970, 993, 1482
BspCNI CTCAG 5 cut(s) 382, 388, 457, 1361, 1614
BspFNI CGCG 1 cut(s) 799
BspLI GGNNCC 4 cut(s) 969, 970, 1110, 1530
BspOI GCTAGC 1 cut(s) 1601
BspPI GGATC 5 cut(s) 761, 1103, 1116, 1380, 1571
BspQI GCTCTTC 1 cut(s) 1405
BsrDI GCAATG 1 cut(s) 349
BsrGI TGTACA 1 cut(s) 1697
BsrI ACTGG 3 cut(s) 1089, 1436, 1562
BssECI CCNNGG 5 cut(s) 30, 603, 972, 1095, 1176
BssNI GRCGYC 1 cut(s) 1154
BssSI CACGAG 2 cut(s) 200, 1664
BssT1I CCWWGG 2 cut(s) 603, 972
Bst2BI CACGAG 2 cut(s) 200, 1664
Bst4CI ACNGT 5 cut(s) 68, 688, 986, 1221, 1876
Bst6I CTCTTC 4 cut(s) 238, 362, 433, 1405
BstACI GRCGYC 1 cut(s) 1154
BstAPI GCANNNNNTGC 1 cut(s) 946
BstAUI TGTACA 1 cut(s) 1697
BstC8I GCNNGC 1 cut(s) 1599
BstDEI CTNAG 5 cut(s) 369, 375, 444, 1348, 1622
BstDSI CCRYGG 1 cut(s) 603
BstEII GGTNACC 1 cut(s) 827
BstENI CCTNNNNNAGG 1 cut(s) 34
BstF5I GGATG 6 cut(s) 77, 626, 721, 918, 1462, 1825
BstFNI CGCG 1 cut(s) 799
BstHHI GCGC 1 cut(s) 925
BstMAI GTCTC 3 cut(s) 378, 411, 1267
BstMWI GCNNNNNNNGC 2 cut(s) 853, 946
BstNSI RCATGY 4 cut(s) 136, 944, 960, 1362
BstPI GGTNACC 1 cut(s) 827
BstSCI CCNGG 1 cut(s) 1149
BstSLI GKGCMC 1 cut(s) 972
BstUI CGCG 1 cut(s) 799
BstV1I GCAGC 3 cut(s) 29, 44, 1738
BstV2I GAAGAC 2 cut(s) 817, 1785
BstX2I RGATCY 1 cut(s) 1108
BstXI CCANNNNNNTGG 1 cut(s) 979
BstYI RGATCY 1 cut(s) 1108
BsuI GTATCC 1 cut(s) 666
BsuRI GGCC 4 cut(s) 778, 970, 993, 1482
BtgI CCRYGG 1 cut(s) 603
BtsCI GGATG 6 cut(s) 77, 626, 721, 918, 1462, 1825
BtsI GCAGTG 2 cut(s) 612, 717
BtsIMutI CAGTG 4 cut(s) 612, 717, 1096, 1619
BtuMI TCGCGA 1 cut(s) 799
Cac8I GCNNGC 1 cut(s) 1599
CfoI GCGC 1 cut(s) 925
Cfr13I GGNCC 4 cut(s) 968, 969, 1505, 1529
CseI GACGC 1 cut(s) 1143
Csp6I GTAC 6 cut(s) 487, 1128, 1183, 1397, 1420, 1698
CviQI GTAC 6 cut(s) 487, 1128, 1183, 1397, 1420, 1698
DdeI CTNAG 5 cut(s) 369, 375, 444, 1348, 1622
EaeI YGGCCR 1 cut(s) 1480
Eam1104I CTCTTC 4 cut(s) 238, 362, 433, 1405
EarI CTCTTC 4 cut(s) 238, 362, 433, 1405
Ecl136II GAGCTC 1 cut(s) 732
Eco130I CCWWGG 2 cut(s) 603, 972
Eco147I AGGCCT 1 cut(s) 993
Eco24I GRGCYC 3 cut(s) 295, 734, 972
Eco32I GATATC 1 cut(s) 1737
Eco47I GGWCC 2 cut(s) 1505, 1529
Eco53kI GAGCTC 1 cut(s) 732
Eco88I CYCGRG 1 cut(s) 31
Eco91I GGTNACC 1 cut(s) 827
EcoICRI GAGCTC 1 cut(s) 732
EcoNI CCTNNNNNAGG 1 cut(s) 34
EcoO109I RGGNCCY 1 cut(s) 968
EcoO65I GGTNACC 1 cut(s) 827
EcoRI GAATTC 2 cut(s) 789, 1304
EcoRV GATATC 1 cut(s) 1737
EcoT14I CCWWGG 2 cut(s) 603, 972
EcoT22I ATGCAT 2 cut(s) 958, 1447
EcoT38I GRGCYC 3 cut(s) 295, 734, 972
ErhI CCWWGG 2 cut(s) 603, 972
Esp3I CGTCTC 1 cut(s) 411
FaqI GGGAC 4 cut(s) 190, 1133, 1228, 1542
FbaI TGATCA 2 cut(s) 1425, 1705
Fnu4HI GCNGC 3 cut(s) 43, 58, 1752
FokI GGATG 6 cut(s) 64, 613, 728, 925, 1449, 1832
FriOI GRGCYC 3 cut(s) 295, 734, 972
Fsp4HI GCNGC 3 cut(s) 43, 58, 1752
FspBI CTAG 4 cut(s) 644, 1394, 1436, 1598
GlaI GCGC 1 cut(s) 924
GluI GCNGC 3 cut(s) 43, 58, 1752
HaeIII GGCC 4 cut(s) 778, 970, 993, 1482
HapII CCGG 1 cut(s) 1151
HgaI GACGC 1 cut(s) 1143
HhaI GCGC 1 cut(s) 925
Hin1I GRCGYC 1 cut(s) 1154
Hin6I GCGC 1 cut(s) 923
HinP1I GCGC 1 cut(s) 923
HincII GTYRAC 1 cut(s) 130
HindII GTYRAC 1 cut(s) 130
HindIII AAGCTT 2 cut(s) 638, 1534
HinfI GANTC 6 cut(s) 203, 533, 650, 1319, 1382, 1497
HpaII CCGG 1 cut(s) 1151
HphI GGTGA 3 cut(s) 184, 232, 304
Hpy166II GTNNAC 2 cut(s) 130, 499
Hpy188III TCNNGA 4 cut(s) 200, 798, 879, 1081
Hpy8I GTNNAC 2 cut(s) 130, 499
Hpy99I CGWCG 1 cut(s) 1313
HpyCH4III ACNGT 5 cut(s) 68, 688, 986, 1221, 1876
HpyCH4V TGCA 8 cut(s) 18, 505, 956, 1362, 1445, 1591, 1754, 1823
HpyF10VI GCNNNNNNNGC 2 cut(s) 853, 946
HpyF3I CTNAG 5 cut(s) 369, 375, 444, 1348, 1622
Hsp92I GRCGYC 1 cut(s) 1154
HspAI GCGC 1 cut(s) 923
Ksp22I TGATCA 2 cut(s) 1425, 1705
LguI GCTCTTC 1 cut(s) 1405
LmnI GCTCC 3 cut(s) 39, 71, 544
Lsp1109I GCAGC 3 cut(s) 29, 44, 1738
LweI GCATC 2 cut(s) 943, 1810
MaeI CTAG 4 cut(s) 644, 1394, 1436, 1598
MaeIII GTNAC 3 cut(s) 827, 883, 1625
MfeI CAATTG 1 cut(s) 1487
MflI RGATCY 1 cut(s) 1108
MhlI GDGCHC 3 cut(s) 295, 734, 972
MlyI GAGTC 2 cut(s) 212, 644
MmeI TCCRAC 3 cut(s) 345, 1136, 1668
Mph1103I ATGCAT 2 cut(s) 958, 1447
MseI TTAA 3 cut(s) 1005, 1103, 1863
MspA1I CMGCKG 1 cut(s) 1751
MspI CCGG 1 cut(s) 1151
MspR9I CCNGG 1 cut(s) 1151
MunI CAATTG 1 cut(s) 1487
Mva1269I GAATGC 2 cut(s) 1447, 1541
MvnI CGCG 1 cut(s) 799
MwoI GCNNNNNNNGC 2 cut(s) 853, 946
NciI CCSGG 1 cut(s) 1151
NcoI CCATGG 1 cut(s) 603
NheI GCTAGC 1 cut(s) 1597
NlaIV GGNNCC 4 cut(s) 969, 970, 1110, 1530
NmuCI GTSAC 1 cut(s) 883
NruI TCGCGA 1 cut(s) 799
NsiI ATGCAT 2 cut(s) 958, 1447
NspI RCATGY 4 cut(s) 136, 944, 960, 1362
PceI AGGCCT 1 cut(s) 993
PciI ACATGT 1 cut(s) 132
PciSI GCTCTTC 1 cut(s) 1405
PctI GAATGC 2 cut(s) 1447, 1541
PfeI GAWTC 4 cut(s) 533, 1319, 1382, 1497
PflMI CCANNNNNTGG 1 cut(s) 1489
PkrI GCNGC 3 cut(s) 44, 59, 1753
PleI GAGTC 2 cut(s) 211, 644
PpsI GAGTC 2 cut(s) 211, 644
PscI ACATGT 1 cut(s) 132
Psp124BI GAGCTC 1 cut(s) 734
PspEI GGTNACC 1 cut(s) 827
PspN4I GGNNCC 4 cut(s) 969, 970, 1110, 1530
PspOMI GGGCCC 1 cut(s) 968
PspPI GGNCC 4 cut(s) 968, 969, 1505, 1529
PsuI RGATCY 1 cut(s) 1108
RruI TCGCGA 1 cut(s) 799
RsaI GTAC 6 cut(s) 488, 1129, 1184, 1398, 1421, 1699
RsaNI GTAC 6 cut(s) 487, 1128, 1183, 1397, 1420, 1698
SacI GAGCTC 1 cut(s) 734
SapI GCTCTTC 1 cut(s) 1405
SaqAI TTAA 3 cut(s) 1005, 1103, 1863
SatI GCNGC 3 cut(s) 43, 58, 1752
Sau96I GGNCC 4 cut(s) 968, 969, 1505, 1529
ScaI AGTACT 2 cut(s) 1184, 1398
SchI GAGTC 2 cut(s) 212, 644
ScrFI CCNGG 1 cut(s) 1151
SduI GDGCHC 3 cut(s) 295, 734, 972
SfaNI GCATC 2 cut(s) 943, 1810
SinI GGWCC 2 cut(s) 1505, 1529
SseBI AGGCCT 1 cut(s) 993
SsiI CCGC 5 cut(s) 630, 762, 895, 1466, 1749
SspI AATATT 1 cut(s) 302
SspMI CTAG 4 cut(s) 644, 1394, 1436, 1598
SstI GAGCTC 1 cut(s) 734
StuI AGGCCT 1 cut(s) 993
StyD4I CCNGG 1 cut(s) 1149
StyI CCWWGG 2 cut(s) 603, 972
TaaI ACNGT 5 cut(s) 68, 688, 986, 1221, 1876
TaqI TCGA 6 cut(s) 477, 878, 1213, 1238, 1308, 1606
TaqII GACCGA 1 cut(s) 1087
TatI WGTACW 4 cut(s) 1127, 1182, 1396, 1697
TfiI GAWTC 4 cut(s) 533, 1319, 1382, 1497
Tru1I TTAA 3 cut(s) 1005, 1103, 1863
Tru9I TTAA 3 cut(s) 1005, 1103, 1863
TscAI CASTG 4 cut(s) 619, 717, 1096, 1626
TseFI GTSAC 1 cut(s) 883
TseI GCWGC 3 cut(s) 42, 57, 1751
Tsp45I GTSAC 1 cut(s) 883
TspDTI ATGAA 7 cut(s) 66, 237, 593, 737, 951, 1263, 1374
TspGWI ACGGA 5 cut(s) 766, 829, 1316, 1326, 1569
TspRI CASTG 4 cut(s) 619, 717, 1096, 1626
Van91I CCANNNNNTGG 1 cut(s) 1489
VpaK11BI GGWCC 2 cut(s) 1505, 1529
XagI CCTNNNNNAGG 1 cut(s) 34
XapI RAATTY 5 cut(s) 789, 1169, 1226, 1304, 1517
XceI RCATGY 4 cut(s) 136, 944, 960, 1362
XcmI CCANNNNNNNNNTGG 1 cut(s) 518
XspI CTAG 4 cut(s) 644, 1394, 1436, 1598
ZrmI AGTACT 2 cut(s) 1184, 1398
Zsp2I ATGCAT 2 cut(s) 958, 1447
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.