Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007070.1

Orthogroup ID

OG0005124

Physical Location & Seq

Genomic Coordinates Reverse (-)

25477 .. 29742

Gene Structure 4266 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0007070.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2418 bp

atgggaggagttagaaaagaagaagaacctaaaggaaaaataggcaaaatcatgaactcaccttgccttagacaagcctcaaaaacctgcttacatggttgctgtgcagctccttttcttgctcctcctcctcctcctcctcctcctcctcctcaaaagccgaattcgtcgacaacaaacaacaaagtcaccattttcaggtatgacttcactcttgcaacagctgcttccctctgctgctaccccaactcccaattcacaaaccatgagtcactcccttcattacatgaatcatatgcttatttcattaaagcataccctcaatactcccaaactgatcaagcagactatatcagagcccatgagtatcaccatctcaacctctccaaacatgtctgccttgattacattgggcacggcctcttctcattctctcagctccaaaagcattaccaaacaccttcaattgcttcatcatcatcatcatctcctcctcctcttccccctactattcctcagtcactatatgccccggaaccattatttttcgatatttcgtacaagtcagtgaacttgcatacccaagtattgtatgggggacaagaatcagaatttgaatttgaaatgaagaaaagaatcatgagttacatgaacatctcagaagttgattacaccttgattttaactgccaatcaatcatcagctttcaaacttctagcagactcttatcccttccagaacaatcccaacctattgagtgtttatgattacaagaatgaggctgtggatgtgatggcagagagctgtaagaaaagaagaggacgagtcatgtttgccgagttctcatggcctaacatgagaattcatacaagtaaattggggagaaagattgggaagaggaagaagatcaggaagcggcccggattgttcgttttcccacttcaatcaagagtcaccggagttcgatactcgtatcagtggatgagcatagcgcaggaaaatgggtggcatgtgttgcttgatgcatgtgcattggggcctaaggacatggagacattaggtctctctttgtttaagcctgactttctaatttgctctttcttcaaagttttcggggaaaatccatccggctttggttgcttgtttgtcaagaaatcgagcgcttcggtgttgaaggattcctcagctgcttcgagcataggaatcgtgagcctcgtcgcatcttcaataccatctcaattagtagtagagaagtcaagtgacaaagaagtctcaataaagcaaaaggcacacacactttcggaaattgaggagctagagagagattctgagtctgaccaatccgaaaattgggagagttatgaaagtggcaagagctcagggattgaatgtagaggtttggatcatgcagatgaattaggcctggtactaattagtaggagagcaaggtacctgatcaactggttagtgaatgcattgatgagtcttcgacatccacattactccgaatatgggcatcaattggtcaaaatctacggccccaagattaaattcgacagaggaccaagcctggcattcaatgtgttcgattggaaaggggagaagatcgagccttcaattgtccagaagcttgctgatcgacacaacatttcgctgagctacggaattttggaccacatttggttctcggacaagcaccaagaagaaaaggaaacgaagtcggagacatgtagaagtgaagtggaaggagctcatgtttctgtggtcacagctgcattgggcttcttgacaaattttgaagacatttacaggctttgggcatttgtttcgaggtttttggatgccgactttgtggagaaggaaagaaaaagtgcggacgttgctcctccggcctcgatcgagcggctacagcgcggcgcggcttgccggaaggacgccgggggtcgtgcggagggggatgcggggaggtggagtcgtcggcgacagttctgcacagaacctgcaactgcaggtgaggtggctgcccagaaaccggcaagcccgacctcctccgacctcgaacgccgcccagaagaggtctgggacacctccggtctccctccggccagccccgcgccgccgtcgtcgcttggaacccgcctgctgcgtcgacgtccgcactttagtgaaggagcgcccaagctgatcgagaatctaagggactcaatgtcctactggcgggggaccttctgcgtcgccacagagggttgggagtatcacgctaggtcgaacgaggaagggccgacatttaagattaacgggactgcggtatactctaacgctcgaagaggagtgtcgcgtagcgaggatcaggggttgctggcggaaccgcaacttgctggacttccgacttctgaccggttgggagttactggttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Aminotran_5

Protein Analysis

805

Amino Acids

90.08

Weight (kDa)

8.4

Isoelectric Point (pI)

59.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005124)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51920
fragaria_vesca	FvH4_4g10020 FvH4_5g01360
malus_domestica	MD00G1005100.v1.1 MD04G1056600.v1.1 MD04G1069100.v1.1
prunus_persica	Prupe.2G288200_v2.0.a1 Prupe.5G089000_v2.0.a1
pyrus_communis	pycom04g06290 pycom07g24010
rosa_chinensis	RchiOBHm_Chr7g0199531
rosa_laevigata	RLG00000003787 RLG00000026609
rosa_multiflora	Rmu_sc0001198.1_g000009 Rmu_sc0005594.1_g000022 Rmu_sc0007070.1_g000003 Rmu_sc0016074.1_g000005
rosa_roxburghii	Rroxscaffold_3G00256630 Rroxscaffold_4G00282180
rosa_rugosa	Rorug07G0055300
rosa_samantha	Rh1AG406800 Rh1BG370900 Rh1CG383700 Rh1DG400600 Rh7AG179800 Rh7BG183100 Rh7CG188800 Rh7DG182500
rosa_wichuraiana	Rw1G036120 Rw7G015790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2000
AasI	GACNNNNNNGTC	1 cut(s)	1268
AatII	GACGTC	1 cut(s)	2155
Acc36I	ACCTGC	3 cut(s)	95, 2000, 2008
Acc65I	GGTACC	1 cut(s)	1449
AccB1I	GGYRCC	1 cut(s)	1449
AccBSI	CCGCTC	1 cut(s)	1903
AccI	GTMKAC	3 cut(s)	170, 2149, 2310
AccII	CGCG	4 cut(s)	1914, 1919, 2114, 2338
AclWI	GGATC	2 cut(s)	1410, 2355
AcoI	YGGCCR	1 cut(s)	2103
AcsI	RAATTY	7 cut(s)	163, 611, 617, 861, 1550, 1665, 1792
AcyI	GRCGYC	2 cut(s)	1935, 2152
AfaI	GTAC	3 cut(s)	560, 1428, 1451
AfeI	AGCGCT	1 cut(s)	1162
AfiI	CCNNNNNNNGG	6 cut(s)	198, 1350, 1512, 2032, 2074, 2217
AflIII	ACRYGT	2 cut(s)	391, 1727
AgeI	ACCGGT	1 cut(s)	2397
AhdI	GACNNNNNGTC	2 cut(s)	1059, 2206
AjnI	CCWGG	2 cut(s)	1422, 1569
AjuI	GAANNNNNNNTTGG	4 cut(s)	239, 271, 1535, 1567
AleI	CACNNNNGTG	1 cut(s)	2163
Alw21I	GWGCWC	2 cut(s)	1379, 1753
Alw26I	GTCTC	5 cut(s)	1046, 1067, 1276, 1718, 2099
AlwI	GGATC	2 cut(s)	1410, 2355
AlwNI	CAGNNNCTG	1 cut(s)	2000
Aor51HI	AGCGCT	1 cut(s)	1162
AoxI	GGCC	9 cut(s)	418, 848, 917, 1037, 1420, 1537, 1890, 2103, 2279
ApeKI	GCWGC	7 cut(s)	107, 224, 237, 1187, 1772, 2021, 2143
ApoI	RAATTY	7 cut(s)	163, 611, 617, 861, 1550, 1665, 1792
ArsI	GACNNNNNNTTYG	2 cut(s)	254, 286
AsiGI	ACCGGT	1 cut(s)	2397
Asp718I	GGTACC	1 cut(s)	1449
AspLEI	GCGC	6 cut(s)	994, 1163, 1914, 1919, 2116, 2176
AspS9I	GGNCC	7 cut(s)	918, 1037, 1538, 1562, 1672, 2223, 2279
AsuC2I	CCSGG	3 cut(s)	533, 921, 1939
AsuHPI	GGTGA	5 cut(s)	51, 181, 362, 946, 2024
AvaII	GGWCC	3 cut(s)	1562, 1672, 2223
AxyI	CCTNAGG	1 cut(s)	1041
BaeGI	GKGCMC	1 cut(s)	417
BanI	GGYRCC	1 cut(s)	1449
BanII	GRGCYC	3 cut(s)	361, 1379, 1753
BbsI	GAAGAC	2 cut(s)	1478, 1806
Bbv12I	GWGCWC	2 cut(s)	1379, 1753
BbvCI	CCTCAGC	1 cut(s)	1183
BbvI	GCAGC	7 cut(s)	119, 211, 224, 1174, 1759, 2008, 2130
BccI	CCATC	4 cut(s)	381, 787, 1132, 1240
BceAI	ACGGC	3 cut(s)	433, 1552, 2104
BcgI	CGANNNNNNTGC	6 cut(s)	1186, 1220, 1809, 1843, 1971, 2005
BciT130I	CCWGG	2 cut(s)	1424, 1571
BclI	TGATCA	2 cut(s)	337, 1455
BcnI	CCSGG	3 cut(s)	533, 921, 1939
BcoDI	GTCTC	5 cut(s)	1046, 1067, 1276, 1718, 2099
BfaI	CTAG	3 cut(s)	716, 1316, 2262
BfmI	CTRYAG	2 cut(s)	1907, 2007
BfoI	RGCGCY	2 cut(s)	1164, 2177
BfuAI	ACCTGC	3 cut(s)	95, 2000, 2008
BlpI	GCTNAGC	1 cut(s)	1655
Bme1390I	CCNGG	5 cut(s)	533, 921, 1424, 1571, 1939
Bme18I	GGWCC	3 cut(s)	1562, 1672, 2223
BmeRI	GACNNNNNGTC	2 cut(s)	1059, 2206
BmgT120I	GGNCC	7 cut(s)	918, 1037, 1538, 1562, 1672, 2223, 2279
BmiI	GGNNCC	7 cut(s)	537, 1038, 1451, 1540, 2134, 2224, 2367
BmrFI	CCNGG	5 cut(s)	533, 921, 1424, 1571, 1939
BmsI	GCATC	5 cut(s)	1012, 1229, 1525, 1831, 1948
BpiI	GAAGAC	2 cut(s)	1478, 1806
Bpu10I	CCTNAGC	2 cut(s)	1183, 1378
Bpu1102I	GCTNAGC	1 cut(s)	1655
BpuMI	CCSGG	3 cut(s)	533, 921, 1939
BsaHI	GRCGYC	2 cut(s)	1935, 2152
BsaI	GGTCTC	2 cut(s)	1067, 2099
BsaJI	CCNNGG	2 cut(s)	531, 1938
BsaWI	WCCGGW	3 cut(s)	956, 2090, 2397
BsaXI	ACNNNNNCTCC	6 cut(s)	233, 263, 1740, 1770, 1957, 1987
Bsc4I	CCNNNNNNNGG	6 cut(s)	198, 1350, 1512, 2032, 2074, 2217
Bse118I	RCCGGY	2 cut(s)	2032, 2397
Bse1I	ACTGG	3 cut(s)	1466, 2219, 2416
Bse21I	CCTNAGG	1 cut(s)	1041
BseBI	CCWGG	2 cut(s)	1424, 1571
BseDI	CCNNGG	2 cut(s)	531, 1938
BseGI	GGATG	6 cut(s)	793, 987, 1124, 1492, 1846, 1963
BseLI	CCNNNNNNNGG	6 cut(s)	198, 1350, 1512, 2032, 2074, 2217
BseMII	CTCAG	7 cut(s)	449, 530, 672, 1197, 1320, 1392, 1646
BseNI	ACTGG	3 cut(s)	1466, 2219, 2416
BseSI	GKGCMC	1 cut(s)	417
BseXI	GCAGC	7 cut(s)	119, 211, 224, 1174, 1759, 2008, 2130
BsgI	GTGCAG	2 cut(s)	126, 1975
Bsh1236I	CGCG	4 cut(s)	1914, 1919, 2114, 2338
Bsh1285I	CGRYCG	1 cut(s)	1899
BshFI	GGCC	9 cut(s)	420, 850, 919, 1039, 1422, 1539, 1892, 2105, 2281
BshNI	GGYRCC	1 cut(s)	1449
BshTI	ACCGGT	1 cut(s)	2397
BsiEI	CGRYCG	1 cut(s)	1899
BsiHKAI	GWGCWC	2 cut(s)	1379, 1753
BslFI	GGGAC	5 cut(s)	612, 2096, 2213, 2236, 2314
BslI	CCNNNNNNNGG	6 cut(s)	198, 1350, 1512, 2032, 2074, 2217
BsmAI	GTCTC	5 cut(s)	1046, 1067, 1276, 1718, 2099
BsmFI	GGGAC	5 cut(s)	612, 2096, 2213, 2236, 2314
BsmI	GAATGC	2 cut(s)	1477, 1574
BsnI	GGCC	9 cut(s)	420, 850, 919, 1039, 1422, 1539, 1892, 2105, 2281
Bso31I	GGTCTC	2 cut(s)	1067, 2099
Bsp1286I	GDGCHC	4 cut(s)	361, 417, 1379, 1753
Bsp143I	GATC	9 cut(s)	337, 906, 1402, 1455, 1605, 1636, 1896, 2184, 2347
Bsp1720I	GCTNAGC	1 cut(s)	1655
BspANI	GGCC	9 cut(s)	420, 850, 919, 1039, 1422, 1539, 1892, 2105, 2281
BspCNI	CTCAG	7 cut(s)	448, 529, 671, 1196, 1321, 1391, 1647
BspFNI	CGCG	4 cut(s)	1914, 1919, 2114, 2338
BspHI	TCATGA	2 cut(s)	51, 639
BspLI	GGNNCC	7 cut(s)	537, 1038, 1451, 1540, 2134, 2224, 2367
BspMAI	CTGCAG	1 cut(s)	2011
BspMI	ACCTGC	3 cut(s)	95, 2000, 2008
BspPI	GGATC	2 cut(s)	1410, 2355
BspT107I	GGYRCC	1 cut(s)	1449
BspTNI	GGTCTC	2 cut(s)	1067, 2099
BsrBI	CCGCTC	1 cut(s)	1903
BsrFI	RCCGGY	2 cut(s)	2032, 2397
BsrI	ACTGG	3 cut(s)	1466, 2219, 2416
BssAI	RCCGGY	2 cut(s)	2032, 2397
BssECI	CCNNGG	2 cut(s)	531, 1938
BssMI	GATC	9 cut(s)	337, 906, 1402, 1455, 1605, 1636, 1896, 2184, 2347
BssNAI	GTATAC	1 cut(s)	2311
BssNI	GRCGYC	2 cut(s)	1935, 2152
Bst1107I	GTATAC	1 cut(s)	2311
Bst2UI	CCWGG	2 cut(s)	1424, 1571
Bst4CI	ACNGT	1 cut(s)	1986
Bst6I	CTCTTC	6 cut(s)	428, 504, 811, 890, 2067, 2320
BstACI	GRCGYC	2 cut(s)	1935, 2152
BstAPI	GCANNNNNTGC	2 cut(s)	224, 1015
BstC8I	GCNNGC	6 cut(s)	1632, 1924, 2038, 2107, 2141, 2361
BstF5I	GGATG	6 cut(s)	793, 987, 1124, 1492, 1846, 1963
BstFNI	CGCG	4 cut(s)	1914, 1919, 2114, 2338
BstH2I	RGCGCY	2 cut(s)	1164, 2177
BstHHI	GCGC	6 cut(s)	994, 1163, 1914, 1919, 2116, 2176
BstKTI	GATC	9 cut(s)	340, 909, 1405, 1458, 1608, 1639, 1899, 2187, 2350
BstMAI	GTCTC	5 cut(s)	1046, 1067, 1276, 1718, 2099
BstMBI	GATC	9 cut(s)	337, 906, 1402, 1455, 1605, 1636, 1896, 2184, 2347
BstMCI	CGRYCG	1 cut(s)	1899
BstNI	CCWGG	2 cut(s)	1424, 1571
BstNSI	RCATGY	4 cut(s)	395, 1013, 1029, 1731
BstSCI	CCNGG	5 cut(s)	531, 919, 1422, 1569, 1937
BstSFI	CTRYAG	2 cut(s)	1907, 2007
BstSLI	GKGCMC	1 cut(s)	417
BstUI	CGCG	4 cut(s)	1914, 1919, 2114, 2338
BstV1I	GCAGC	7 cut(s)	119, 211, 224, 1174, 1759, 2008, 2130
BstV2I	GAAGAC	2 cut(s)	1478, 1806
BstZ17I	GTATAC	1 cut(s)	2311
Bsu36I	CCTNAGG	1 cut(s)	1041
BsuRI	GGCC	9 cut(s)	420, 850, 919, 1039, 1422, 1539, 1892, 2105, 2281
BtsCI	GGATG	6 cut(s)	793, 987, 1124, 1492, 1846, 1963
BtsIMutI	CAGTG	2 cut(s)	573, 983
BveI	ACCTGC	3 cut(s)	95, 2000, 2008
Cac8I	GCNNGC	6 cut(s)	1632, 1924, 2038, 2107, 2141, 2361
CaiI	CAGNNNCTG	1 cut(s)	2000
CciI	TCATGA	2 cut(s)	51, 639
CfoI	GCGC	6 cut(s)	994, 1163, 1914, 1919, 2116, 2176
Cfr10I	RCCGGY	2 cut(s)	2032, 2397
Cfr13I	GGNCC	7 cut(s)	918, 1037, 1538, 1562, 1672, 2223, 2279
CseI	GACGC	3 cut(s)	1943, 2135, 2221
Csp6I	GTAC	3 cut(s)	559, 1427, 1450
CspAI	ACCGGT	1 cut(s)	2397
CviQI	GTAC	3 cut(s)	559, 1427, 1450
DpnI	GATC	9 cut(s)	339, 908, 1404, 1457, 1607, 1638, 1898, 2186, 2349
DpnII	GATC	9 cut(s)	337, 906, 1402, 1455, 1605, 1636, 1896, 2184, 2347
DrdI	GACNNNNNNGTC	1 cut(s)	1268
DriI	GACNNNNNGTC	2 cut(s)	1059, 2206
DseDI	GACNNNNNNGTC	1 cut(s)	1268
EaeI	YGGCCR	1 cut(s)	2103
Eam1104I	CTCTTC	6 cut(s)	428, 504, 811, 890, 2067, 2320
Eam1105I	GACNNNNNGTC	2 cut(s)	1059, 2206
EarI	CTCTTC	6 cut(s)	428, 504, 811, 890, 2067, 2320
EciI	GGCGGA	1 cut(s)	2378
Ecl136II	GAGCTC	2 cut(s)	1377, 1751
Eco147I	AGGCCT	1 cut(s)	1422
Eco24I	GRGCYC	3 cut(s)	361, 1379, 1753
Eco31I	GGTCTC	2 cut(s)	1067, 2099
Eco47I	GGWCC	3 cut(s)	1562, 1672, 2223
Eco47III	AGCGCT	1 cut(s)	1162
Eco53kI	GAGCTC	2 cut(s)	1377, 1751
Eco81I	CCTNAGG	1 cut(s)	1041
EcoICRI	GAGCTC	2 cut(s)	1377, 1751
EcoO109I	RGGNCCY	2 cut(s)	1037, 2223
EcoRI	GAATTC	2 cut(s)	163, 861
EcoRII	CCWGG	2 cut(s)	1422, 1569
EcoT22I	ATGCAT	2 cut(s)	1027, 1477
EcoT38I	GRGCYC	3 cut(s)	361, 1379, 1753
FalI	AAGNNNNNCTT	2 cut(s)	1067, 1099
FaqI	GGGAC	5 cut(s)	612, 2096, 2213, 2236, 2314
FauI	CCCGC	4 cut(s)	1954, 2119, 2144, 2211
FauNDI	CATATG	1 cut(s)	295
FbaI	TGATCA	2 cut(s)	337, 1455
FblI	GTMKAC	3 cut(s)	170, 2149, 2310
FokI	GGATG	6 cut(s)	800, 994, 1111, 1479, 1853, 1970
FriOI	GRGCYC	3 cut(s)	361, 1379, 1753
FspBI	CTAG	3 cut(s)	716, 1316, 2262
GlaI	GCGC	6 cut(s)	993, 1162, 1913, 1918, 2115, 2175
HaeII	RGCGCY	2 cut(s)	1164, 2177
HaeIII	GGCC	9 cut(s)	420, 850, 919, 1039, 1422, 1539, 1892, 2105, 2281
HgaI	GACGC	3 cut(s)	1943, 2135, 2221
HhaI	GCGC	6 cut(s)	994, 1163, 1914, 1919, 2116, 2176
Hin1I	GRCGYC	2 cut(s)	1935, 2152
Hin6I	GCGC	6 cut(s)	992, 1161, 1912, 1917, 2114, 2174
HinP1I	GCGC	6 cut(s)	992, 1161, 1912, 1917, 2114, 2174
HincII	GTYRAC	2 cut(s)	171, 2150
HindII	GTYRAC	2 cut(s)	171, 2150
HindIII	AAGCTT	1 cut(s)	1628
HphI	GGTGA	5 cut(s)	51, 181, 362, 946, 2024
Hpy166II	GTNNAC	4 cut(s)	171, 571, 2150, 2311
Hpy8I	GTNNAC	4 cut(s)	171, 571, 2150, 2311
Hpy99I	CGWCG	8 cut(s)	172, 1220, 1980, 2125, 2128, 2151, 2154, 2237
HpyCH4III	ACNGT	1 cut(s)	1986
HpyCH4IV	ACGT	2 cut(s)	1878, 2152
HpySE526I	ACGT	2 cut(s)	1878, 2152
Hsp92I	GRCGYC	2 cut(s)	1935, 2152
HspAI	GCGC	6 cut(s)	992, 1161, 1912, 1917, 2114, 2174
KpnI	GGTACC	1 cut(s)	1453
Ksp22I	TGATCA	2 cut(s)	337, 1455
Kzo9I	GATC	9 cut(s)	337, 906, 1402, 1455, 1605, 1636, 1896, 2184, 2347
LmnI	GCTCC	7 cut(s)	115, 127, 444, 1312, 1748, 1888, 2171
Lsp1109I	GCAGC	7 cut(s)	119, 211, 224, 1174, 1759, 2008, 2130
LweI	GCATC	5 cut(s)	1012, 1229, 1525, 1831, 1948
MaeI	CTAG	3 cut(s)	716, 1316, 2262
MaeII	ACGT	2 cut(s)	1878, 2152
MaeIII	GTNAC	8 cut(s)	187, 270, 519, 644, 952, 1259, 1765, 2407
MalI	GATC	9 cut(s)	339, 908, 1404, 1457, 1607, 1638, 1898, 2186, 2349
MbiI	CCGCTC	1 cut(s)	1903
MboI	GATC	9 cut(s)	337, 906, 1402, 1455, 1605, 1636, 1896, 2184, 2347
MfeI	CAATTG	3 cut(s)	465, 1520, 1617
MhlI	GDGCHC	4 cut(s)	361, 417, 1379, 1753
MlyI	GAGTC	8 cut(s)	278, 716, 834, 960, 1340, 1492, 1981, 2195
MmeI	TCCRAC	3 cut(s)	1701, 2076, 2411
Mph1103I	ATGCAT	2 cut(s)	1027, 1477
MseI	TTAA	6 cut(s)	309, 683, 1074, 1548, 2289, 2295
MslI	CAYNNNNRTG	2 cut(s)	1410, 2163
MspA1I	CMGCKG	3 cut(s)	224, 1187, 1772
MspR9I	CCNGG	5 cut(s)	533, 921, 1424, 1571, 1939
MteI	GCGCNGCGC	1 cut(s)	1915
MunI	CAATTG	3 cut(s)	465, 1520, 1617
Mva1269I	GAATGC	2 cut(s)	1477, 1574
MvaI	CCWGG	2 cut(s)	1424, 1571
MvnI	CGCG	4 cut(s)	1914, 1919, 2114, 2338
NciI	CCSGG	3 cut(s)	533, 921, 1939
NdeI	CATATG	1 cut(s)	295
NdeII	GATC	9 cut(s)	337, 906, 1402, 1455, 1605, 1636, 1896, 2184, 2347
NlaIV	GGNNCC	7 cut(s)	537, 1038, 1451, 1540, 2134, 2224, 2367
NmeAIII	GCCGAG	1 cut(s)	862
NmuCI	GTSAC	6 cut(s)	187, 270, 519, 952, 1259, 1765
NsiI	ATGCAT	2 cut(s)	1027, 1477
NspI	RCATGY	4 cut(s)	395, 1013, 1029, 1731
OliI	CACNNNNGTG	1 cut(s)	2163
PagI	TCATGA	2 cut(s)	51, 639
PaqCI	CACCTGC	1 cut(s)	2000
PceI	AGGCCT	1 cut(s)	1422
PciI	ACATGT	2 cut(s)	391, 1727
PcsI	WCGNNNNNNNCGW	1 cut(s)	1212
PctI	GAATGC	2 cut(s)	1477, 1574
PfeI	GAWTC	7 cut(s)	290, 605, 636, 1178, 1203, 1325, 2191
PinAI	ACCGGT	1 cut(s)	2397
Ple19I	CGATCG	1 cut(s)	1899
PleI	GAGTC	8 cut(s)	277, 716, 833, 959, 1339, 1491, 1980, 2195
PpsI	GAGTC	8 cut(s)	277, 716, 833, 959, 1339, 1491, 1980, 2195
PpuMI	RGGWCCY	1 cut(s)	2223
PscI	ACATGT	2 cut(s)	391, 1727
Psp124BI	GAGCTC	2 cut(s)	1379, 1753
Psp5II	RGGWCCY	1 cut(s)	2223
Psp6I	CCWGG	2 cut(s)	1422, 1569
PspGI	CCWGG	2 cut(s)	1422, 1569
PspN4I	GGNNCC	7 cut(s)	537, 1038, 1451, 1540, 2134, 2224, 2367
PspPI	GGNCC	7 cut(s)	918, 1037, 1538, 1562, 1672, 2223, 2279
PspPPI	RGGWCCY	1 cut(s)	2223
PstI	CTGCAG	1 cut(s)	2011
PstNI	CAGNNNCTG	1 cut(s)	2000
PvuI	CGATCG	1 cut(s)	1899
PvuII	CAGCTG	3 cut(s)	224, 1187, 1772
RsaI	GTAC	3 cut(s)	560, 1428, 1451
RsaNI	GTAC	3 cut(s)	559, 1427, 1450
RseI	CAYNNNNRTG	2 cut(s)	1410, 2163
SacI	GAGCTC	2 cut(s)	1379, 1753
SalI	GTCGAC	2 cut(s)	169, 2148
SaqAI	TTAA	6 cut(s)	309, 683, 1074, 1548, 2289, 2295
Sau3AI	GATC	9 cut(s)	337, 906, 1402, 1455, 1605, 1636, 1896, 2184, 2347
Sau96I	GGNCC	7 cut(s)	918, 1037, 1538, 1562, 1672, 2223, 2279
SchI	GAGTC	8 cut(s)	278, 716, 834, 960, 1340, 1492, 1981, 2195
ScrFI	CCNGG	5 cut(s)	533, 921, 1424, 1571, 1939
SduI	GDGCHC	4 cut(s)	361, 417, 1379, 1753
SfaNI	GCATC	5 cut(s)	1012, 1229, 1525, 1831, 1948
SfcI	CTRYAG	2 cut(s)	1907, 2007
SgrDI	CGTCGACG	1 cut(s)	2148
SinI	GGWCC	3 cut(s)	1562, 1672, 2223
SmiMI	CAYNNNNRTG	2 cut(s)	1410, 2163
SseBI	AGGCCT	1 cut(s)	1422
SspMI	CTAG	3 cut(s)	716, 1316, 2262
SstI	GAGCTC	2 cut(s)	1379, 1753
StuI	AGGCCT	1 cut(s)	1422
StyD4I	CCNGG	5 cut(s)	531, 919, 1422, 1569, 1937
TaaI	ACNGT	1 cut(s)	1986
TaiI	ACGT	2 cut(s)	1881, 2155
TauI	GCSGC	6 cut(s)	919, 1906, 1917, 1922, 2067, 2119
TfiI	GAWTC	7 cut(s)	290, 605, 636, 1178, 1203, 1325, 2191
Tru1I	TTAA	6 cut(s)	309, 683, 1074, 1548, 2289, 2295
Tru9I	TTAA	6 cut(s)	309, 683, 1074, 1548, 2289, 2295
TscAI	CASTG	2 cut(s)	573, 983
TseFI	GTSAC	6 cut(s)	187, 270, 519, 952, 1259, 1765
TseI	GCWGC	7 cut(s)	107, 224, 237, 1187, 1772, 2021, 2143
Tsp45I	GTSAC	6 cut(s)	187, 270, 519, 952, 1259, 1765
TspGWI	ACGGA	1 cut(s)	1677
TspRI	CASTG	2 cut(s)	573, 983
VpaK11BI	GGWCC	3 cut(s)	1562, 1672, 2223
XapI	RAATTY	7 cut(s)	163, 611, 617, 861, 1550, 1665, 1792
XceI	RCATGY	4 cut(s)	395, 1013, 1029, 1731
XcmI	CCANNNNNNNNNTGG	2 cut(s)	590, 2076
XmiI	GTMKAC	3 cut(s)	170, 2149, 2310
XspI	CTAG	3 cut(s)	716, 1316, 2262
ZraI	GACGTC	1 cut(s)	2153
Zsp2I	ATGCAT	2 cut(s)	1027, 1477

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.