Rw7G015790

molybdenum cofactor

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Forward (+)
16092083 .. 16094099
2017 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G015790.1

Sequence Viewer

Length: 1902 bp
ATGGGAGGAGTTAGAAAAGAAGAAGAACCTAAAGGAAAAATAGGCAAAATCATGAACTCACCTTGCCTTAGACAAGCCTCAAAAACCTGCTTACATGGTTGCTGTGCAGCTCCTTTTCTTGCTCCTCCTCCTCCTCCTCCTCCTCCTCAAAAGCCGAATTCGTCGACAACAAACAACAAAGTCACCATTTTCAGGTATGACTTCACTCTTGCAACAGCTGCTTCCCTCTGCTGCTACCCCAACTCCCAATTCACAAACCATGAGTCACTCCCTTCATTACATGAATCATATGCTTATTTCATTAAAGCATACCCTCAATACTCCCAAACTGATCAAGCAGACTATATCAGAGCCCATGAGTATCACCATCTCAACCTCTCCAAACATGTCTGCCTTGATTACATTGGGCACGGCCTCTTCTCATTCTCTCAGCTCCAAAAGCATTACCAAACACCTTCAATTGCTTCATCATCATCATCATCTCCTCCTCCTCTTCCCCCTACTATTCCTCAGTCACTATATGCCCCGGAACCATTCTTTTTCGATATTTCGTACAAGTCAGTGAACTTGCATACCCAAGTATTGTATGGGGGACAAGAATCAGAATTTGAATTTGAAATGAAGAAAAGAATCATGAGTTACATGAACATCTCAGAAGTTGATTACACCTTGATTTTAACTGCCAATCAATCATCAGCTTTCAAACTTCTAGCAGACTCTTATCCCTTCCAGAACAATCCCAACCTATTGAGTGTTTATGACTACAAGAATGAGGCTGTGGATGTGATGGCAGAGAGCTGTAAGAAAAGAAGAGGACGAGTCATGTCTGCCGAGTTCTCATGGCCTAACATGAGAATTCATACAAGTAGATTGGGGAGAAAGATTGGGAAGAGGAAGAAGATCAGGAAGCGGCCCGGATTGTTCGTTTTCCCACTTCAATCAAGAGTCACCGGAGTTCGATACTCGTATCAGTGGATGAGCATAGCGCAGGAAAATGGGTGGCATGTGTTGCTTGATGCATGTGCATTGGGGCCTAAGGACATGGAGACATTAGGTCTCTCTTTGTTTAAGCCTGACTTTCTAATTTGCTCTTTCTTCAAAGTTTTTGGGGAAAATCCATCCGGCTTTGGTTGCTTGTTTGTCAAGAAATCGAGCGCTTCGGTGTTGAAGGATTCCTCAGTTGCTTCGAGCATAGGAATCGTGAGCCTCGTCGCATCTTCAATACCATCTCAATTAGTAGTAGAGAAGTCAAGTGACAAAGAAGTCTCAATAAAGCAAAAGGCACACACACTTTCGGAAATTGAGGAGCTAGAGAGAGATTCTGAGTCTGACCAATCCGAAAATTGGGAGAGTTATGAAAGTGGCAAGAGCTCAGGGATTGAATGTAGAGGTTTGGATCATGCAGATGAATTAGGACTGGTACTAATTAGTAGGAGAGCAAGGTACCTGATCAACTGGTTAGTGAATGCATTGATGAGTCTTCGACATCCACATTACTCCGAATATGGGCATCAATTGGTCAAAATCTACGGCCCCAAGATTAAATTCGACAGAGGACCAAGCCTGGCATTCAATGTGTTCGATTGGAAAGGGGAGAAGATCGAGCCTTCAATTGTCCAGAAGCTTGCTGATCGACACAACATTTCGCTGAGCTACGGAATTTTGGACCACATTTGGTTCTCGGACAAGCACCAAGAAGAAAAGGAAACGAAGTCGGAGACATGTAGAAGTGAAGTGGAAGGAGCTCATGTTTCTGTGGTCACAGCTGCATTGGGCTTCTTGACAAATTTTGAAGACATTTACAGGCTTTGGGCATTTGTTTCGAGGTTTTTGGATGCCGACTTTGTGGAGAAGGAAAGGTGGAGATACATGGCCCTCAATCAAAGGACTGTTGAGGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

633

Amino Acids

71.83

Weight (kDa)

8.25

Isoelectric Point (pI)

53.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1262
Acc36I ACCTGC 1 cut(s) 95
Acc65I GGTACC 1 cut(s) 1443
AccB1I GGYRCC 1 cut(s) 1443
AccI GTMKAC 1 cut(s) 164
AciI CCGC 1 cut(s) 910
AclWI GGATC 1 cut(s) 1404
AcsI RAATTY 7 cut(s) 157, 605, 611, 855, 1544, 1659, 1786
AfaI GTAC 3 cut(s) 554, 1422, 1445
AfeI AGCGCT 1 cut(s) 1156
AfiI CCNNNNNNNGG 3 cut(s) 192, 1344, 1506
AflIII ACRYGT 2 cut(s) 385, 1721
AhdI GACNNNNNGTC 1 cut(s) 1053
AjnI CCWGG 1 cut(s) 1563
AjuI GAANNNNNNNTTGG 4 cut(s) 233, 265, 1529, 1561
Alw21I GWGCWC 2 cut(s) 1373, 1747
Alw26I GTCTC 4 cut(s) 1040, 1061, 1270, 1712
AlwI GGATC 1 cut(s) 1404
Aor51HI AGCGCT 1 cut(s) 1156
AoxI GGCC 6 cut(s) 412, 842, 911, 1031, 1531, 1872
ApeKI GCWGC 4 cut(s) 107, 218, 231, 1766
ApoI RAATTY 7 cut(s) 157, 605, 611, 855, 1544, 1659, 1786
ArsI GACNNNNNNTTYG 2 cut(s) 248, 280
Asp718I GGTACC 1 cut(s) 1443
AspLEI GCGC 2 cut(s) 988, 1157
AspS9I GGNCC 6 cut(s) 912, 1031, 1532, 1556, 1666, 1873
AsuC2I CCSGG 2 cut(s) 527, 915
AsuHPI GGTGA 4 cut(s) 51, 175, 356, 940
AvaII GGWCC 2 cut(s) 1556, 1666
AxyI CCTNAGG 1 cut(s) 1035
BaeGI GKGCMC 1 cut(s) 411
BanI GGYRCC 1 cut(s) 1443
BanII GRGCYC 3 cut(s) 355, 1373, 1747
BbsI GAAGAC 2 cut(s) 1472, 1800
Bbv12I GWGCWC 2 cut(s) 1373, 1747
BbvI GCAGC 4 cut(s) 119, 205, 218, 1753
BccI CCATC 4 cut(s) 375, 781, 1126, 1234
BceAI ACGGC 2 cut(s) 427, 1546
BcgI CGANNNNNNTGC 4 cut(s) 1180, 1214, 1803, 1837
BciT130I CCWGG 1 cut(s) 1565
BclI TGATCA 2 cut(s) 331, 1449
BcnI CCSGG 2 cut(s) 527, 915
BcoDI GTCTC 4 cut(s) 1040, 1061, 1270, 1712
BfaI CTAG 2 cut(s) 710, 1310
BfoI RGCGCY 1 cut(s) 1158
BfuAI ACCTGC 1 cut(s) 95
BisI GCNGC 5 cut(s) 108, 219, 232, 911, 1767
BlpI GCTNAGC 1 cut(s) 1649
BlsI GCNGC 5 cut(s) 109, 220, 233, 912, 1768
Bme1390I CCNGG 3 cut(s) 527, 915, 1565
Bme18I GGWCC 2 cut(s) 1556, 1666
BmeRI GACNNNNNGTC 1 cut(s) 1053
BmgT120I GGNCC 6 cut(s) 912, 1031, 1532, 1556, 1666, 1873
BmiI GGNNCC 4 cut(s) 531, 1032, 1445, 1534
BmrFI CCNGG 3 cut(s) 527, 915, 1565
BmsI GCATC 4 cut(s) 1006, 1223, 1519, 1825
BpiI GAAGAC 2 cut(s) 1472, 1800
Bpu10I CCTNAGC 1 cut(s) 1372
Bpu1102I GCTNAGC 1 cut(s) 1649
BpuMI CCSGG 2 cut(s) 527, 915
BsaI GGTCTC 1 cut(s) 1061
BsaJI CCNNGG 1 cut(s) 525
BsaWI WCCGGW 1 cut(s) 950
BsaXI ACNNNNNCTCC 4 cut(s) 227, 257, 1734, 1764
Bsc4I CCNNNNNNNGG 3 cut(s) 192, 1344, 1506
Bse1I ACTGG 2 cut(s) 1422, 1460
Bse21I CCTNAGG 1 cut(s) 1035
BseBI CCWGG 1 cut(s) 1565
BseDI CCNNGG 1 cut(s) 525
BseGI GGATG 5 cut(s) 787, 981, 1118, 1486, 1840
BseLI CCNNNNNNNGG 3 cut(s) 192, 1344, 1506
BseMII CTCAG 7 cut(s) 443, 524, 666, 1191, 1314, 1386, 1640
BseNI ACTGG 2 cut(s) 1422, 1460
BseSI GKGCMC 1 cut(s) 411
BseXI GCAGC 4 cut(s) 119, 205, 218, 1753
BsgI GTGCAG 1 cut(s) 126
BshFI GGCC 6 cut(s) 414, 844, 913, 1033, 1533, 1874
BshNI GGYRCC 1 cut(s) 1443
BsiHKAI GWGCWC 2 cut(s) 1373, 1747
BsiSI CCGG 4 cut(s) 527, 915, 951, 1122
BslFI GGGAC 1 cut(s) 606
BslI CCNNNNNNNGG 3 cut(s) 192, 1344, 1506
BsmAI GTCTC 4 cut(s) 1040, 1061, 1270, 1712
BsmFI GGGAC 1 cut(s) 606
BsmI GAATGC 2 cut(s) 1471, 1568
BsnI GGCC 6 cut(s) 414, 844, 913, 1033, 1533, 1874
Bso31I GGTCTC 1 cut(s) 1061
Bsp1286I GDGCHC 4 cut(s) 355, 411, 1373, 1747
Bsp143I GATC 6 cut(s) 331, 900, 1396, 1449, 1599, 1630
Bsp1720I GCTNAGC 1 cut(s) 1649
BspACI CCGC 1 cut(s) 910
BspANI GGCC 6 cut(s) 414, 844, 913, 1033, 1533, 1874
BspCNI CTCAG 7 cut(s) 442, 523, 665, 1190, 1315, 1385, 1641
BspHI TCATGA 2 cut(s) 51, 633
BspLI GGNNCC 4 cut(s) 531, 1032, 1445, 1534
BspMI ACCTGC 1 cut(s) 95
BspPI GGATC 1 cut(s) 1404
BspT107I GGYRCC 1 cut(s) 1443
BspTNI GGTCTC 1 cut(s) 1061
BsrI ACTGG 2 cut(s) 1422, 1460
BssECI CCNNGG 1 cut(s) 525
BssMI GATC 6 cut(s) 331, 900, 1396, 1449, 1599, 1630
Bst2UI CCWGG 1 cut(s) 1565
Bst4CI ACNGT 1 cut(s) 1891
Bst6I CTCTTC 4 cut(s) 422, 498, 805, 884
BstAPI GCANNNNNTGC 2 cut(s) 218, 1009
BstC8I GCNNGC 1 cut(s) 1626
BstDEI CTNAG 9 cut(s) 68, 429, 510, 652, 1035, 1177, 1323, 1372, 1649
BstF5I GGATG 5 cut(s) 787, 981, 1118, 1486, 1840
BstH2I RGCGCY 1 cut(s) 1158
BstHHI GCGC 2 cut(s) 988, 1157
BstKTI GATC 6 cut(s) 334, 903, 1399, 1452, 1602, 1633
BstMAI GTCTC 4 cut(s) 1040, 1061, 1270, 1712
BstMBI GATC 6 cut(s) 331, 900, 1396, 1449, 1599, 1630
BstMWI GCNNNNNNNGC 4 cut(s) 218, 439, 1009, 1131
BstNI CCWGG 1 cut(s) 1565
BstNSI RCATGY 4 cut(s) 389, 1007, 1023, 1725
BstSCI CCNGG 3 cut(s) 525, 913, 1563
BstSLI GKGCMC 1 cut(s) 411
BstV1I GCAGC 4 cut(s) 119, 205, 218, 1753
BstV2I GAAGAC 2 cut(s) 1472, 1800
Bsu36I CCTNAGG 1 cut(s) 1035
BsuRI GGCC 6 cut(s) 414, 844, 913, 1033, 1533, 1874
BtsCI GGATG 5 cut(s) 787, 981, 1118, 1486, 1840
BtsIMutI CAGTG 2 cut(s) 567, 977
BveI ACCTGC 1 cut(s) 95
Cac8I GCNNGC 1 cut(s) 1626
CciI TCATGA 2 cut(s) 51, 633
CfoI GCGC 2 cut(s) 988, 1157
Cfr13I GGNCC 6 cut(s) 912, 1031, 1532, 1556, 1666, 1873
Csp6I GTAC 3 cut(s) 553, 1421, 1444
CviQI GTAC 3 cut(s) 553, 1421, 1444
DdeI CTNAG 9 cut(s) 68, 429, 510, 652, 1035, 1177, 1323, 1372, 1649
DpnI GATC 6 cut(s) 333, 902, 1398, 1451, 1601, 1632
DpnII GATC 6 cut(s) 331, 900, 1396, 1449, 1599, 1630
DrdI GACNNNNNNGTC 1 cut(s) 1262
DriI GACNNNNNGTC 1 cut(s) 1053
DseDI GACNNNNNNGTC 1 cut(s) 1262
Eam1104I CTCTTC 4 cut(s) 422, 498, 805, 884
Eam1105I GACNNNNNGTC 1 cut(s) 1053
EarI CTCTTC 4 cut(s) 422, 498, 805, 884
Ecl136II GAGCTC 2 cut(s) 1371, 1745
Eco24I GRGCYC 3 cut(s) 355, 1373, 1747
Eco31I GGTCTC 1 cut(s) 1061
Eco47I GGWCC 2 cut(s) 1556, 1666
Eco47III AGCGCT 1 cut(s) 1156
Eco53kI GAGCTC 2 cut(s) 1371, 1745
Eco81I CCTNAGG 1 cut(s) 1035
EcoICRI GAGCTC 2 cut(s) 1371, 1745
EcoO109I RGGNCCY 1 cut(s) 1031
EcoRI GAATTC 2 cut(s) 157, 855
EcoRII CCWGG 1 cut(s) 1563
EcoT22I ATGCAT 2 cut(s) 1021, 1471
EcoT38I GRGCYC 3 cut(s) 355, 1373, 1747
FalI AAGNNNNNCTT 2 cut(s) 1061, 1093
FaqI GGGAC 1 cut(s) 606
FauNDI CATATG 1 cut(s) 289
FbaI TGATCA 2 cut(s) 331, 1449
FblI GTMKAC 1 cut(s) 164
Fnu4HI GCNGC 5 cut(s) 108, 219, 232, 911, 1767
FokI GGATG 5 cut(s) 794, 988, 1105, 1473, 1847
FriOI GRGCYC 3 cut(s) 355, 1373, 1747
Fsp4HI GCNGC 5 cut(s) 108, 219, 232, 911, 1767
FspBI CTAG 2 cut(s) 710, 1310
GlaI GCGC 2 cut(s) 987, 1156
GluI GCNGC 5 cut(s) 108, 219, 232, 911, 1767
HaeII RGCGCY 1 cut(s) 1158
HaeIII GGCC 6 cut(s) 414, 844, 913, 1033, 1533, 1874
HapII CCGG 4 cut(s) 527, 915, 951, 1122
HhaI GCGC 2 cut(s) 988, 1157
Hin6I GCGC 2 cut(s) 986, 1155
HinP1I GCGC 2 cut(s) 986, 1155
HincII GTYRAC 1 cut(s) 165
HindII GTYRAC 1 cut(s) 165
HindIII AAGCTT 1 cut(s) 1622
HpaII CCGG 4 cut(s) 527, 915, 951, 1122
HphI GGTGA 4 cut(s) 51, 175, 356, 940
Hpy166II GTNNAC 2 cut(s) 165, 565
Hpy188III TCNNGA 9 cut(s) 52, 634, 730, 904, 942, 1144, 1201, 1618, 1780
Hpy8I GTNNAC 2 cut(s) 165, 565
Hpy99I CGWCG 2 cut(s) 166, 1214
HpyAV CCTTC 7 cut(s) 282, 465, 736, 1162, 1617, 1733, 1846
HpyCH4III ACNGT 1 cut(s) 1891
HpyCH4V TGCA 8 cut(s) 107, 212, 571, 1019, 1025, 1403, 1469, 1769
HpyF10VI GCNNNNNNNGC 4 cut(s) 218, 439, 1009, 1131
HpyF3I CTNAG 9 cut(s) 68, 429, 510, 652, 1035, 1177, 1323, 1372, 1649
HspAI GCGC 2 cut(s) 986, 1155
KpnI GGTACC 1 cut(s) 1447
Ksp22I TGATCA 2 cut(s) 331, 1449
Kzo9I GATC 6 cut(s) 331, 900, 1396, 1449, 1599, 1630
LmnI GCTCC 5 cut(s) 115, 127, 438, 1306, 1742
Lsp1109I GCAGC 4 cut(s) 119, 205, 218, 1753
LweI GCATC 4 cut(s) 1006, 1223, 1519, 1825
MaeI CTAG 2 cut(s) 710, 1310
MaeIII GTNAC 7 cut(s) 181, 264, 513, 638, 946, 1253, 1759
MalI GATC 6 cut(s) 333, 902, 1398, 1451, 1601, 1632
MboI GATC 6 cut(s) 331, 900, 1396, 1449, 1599, 1630
MfeI CAATTG 3 cut(s) 459, 1514, 1611
MhlI GDGCHC 4 cut(s) 355, 411, 1373, 1747
MlyI GAGTC 6 cut(s) 272, 710, 828, 954, 1334, 1486
MmeI TCCRAC 1 cut(s) 1695
Mph1103I ATGCAT 2 cut(s) 1021, 1471
MseI TTAA 4 cut(s) 303, 677, 1068, 1542
MslI CAYNNNNRTG 1 cut(s) 1404
MspA1I CMGCKG 2 cut(s) 218, 1766
MspI CCGG 4 cut(s) 527, 915, 951, 1122
MspR9I CCNGG 3 cut(s) 527, 915, 1565
MunI CAATTG 3 cut(s) 459, 1514, 1611
Mva1269I GAATGC 2 cut(s) 1471, 1568
MvaI CCWGG 1 cut(s) 1565
MwoI GCNNNNNNNGC 4 cut(s) 218, 439, 1009, 1131
NciI CCSGG 2 cut(s) 527, 915
NdeI CATATG 1 cut(s) 289
NdeII GATC 6 cut(s) 331, 900, 1396, 1449, 1599, 1630
NlaIV GGNNCC 4 cut(s) 531, 1032, 1445, 1534
NmeAIII GCCGAG 1 cut(s) 856
NmuCI GTSAC 6 cut(s) 181, 264, 513, 946, 1253, 1759
NsiI ATGCAT 2 cut(s) 1021, 1471
NspI RCATGY 4 cut(s) 389, 1007, 1023, 1725
PagI TCATGA 2 cut(s) 51, 633
PciI ACATGT 2 cut(s) 385, 1721
PcsI WCGNNNNNNNCGW 1 cut(s) 1206
PctI GAATGC 2 cut(s) 1471, 1568
PfeI GAWTC 6 cut(s) 284, 599, 630, 1172, 1197, 1319
PkrI GCNGC 5 cut(s) 109, 220, 233, 912, 1768
PleI GAGTC 6 cut(s) 271, 710, 827, 953, 1333, 1485
PpsI GAGTC 6 cut(s) 271, 710, 827, 953, 1333, 1485
PscI ACATGT 2 cut(s) 385, 1721
Psp124BI GAGCTC 2 cut(s) 1373, 1747
Psp6I CCWGG 1 cut(s) 1563
PspGI CCWGG 1 cut(s) 1563
PspN4I GGNNCC 4 cut(s) 531, 1032, 1445, 1534
PspPI GGNCC 6 cut(s) 912, 1031, 1532, 1556, 1666, 1873
PvuII CAGCTG 2 cut(s) 218, 1766
RsaI GTAC 3 cut(s) 554, 1422, 1445
RsaNI GTAC 3 cut(s) 553, 1421, 1444
RseI CAYNNNNRTG 1 cut(s) 1404
SacI GAGCTC 2 cut(s) 1373, 1747
SalI GTCGAC 1 cut(s) 163
SaqAI TTAA 4 cut(s) 303, 677, 1068, 1542
SatI GCNGC 5 cut(s) 108, 219, 232, 911, 1767
Sau3AI GATC 6 cut(s) 331, 900, 1396, 1449, 1599, 1630
Sau96I GGNCC 6 cut(s) 912, 1031, 1532, 1556, 1666, 1873
SchI GAGTC 6 cut(s) 272, 710, 828, 954, 1334, 1486
ScrFI CCNGG 3 cut(s) 527, 915, 1565
SduI GDGCHC 4 cut(s) 355, 411, 1373, 1747
SfaNI GCATC 4 cut(s) 1006, 1223, 1519, 1825
SinI GGWCC 2 cut(s) 1556, 1666
SmiMI CAYNNNNRTG 1 cut(s) 1404
SsiI CCGC 1 cut(s) 910
SspMI CTAG 2 cut(s) 710, 1310
SstI GAGCTC 2 cut(s) 1373, 1747
StyD4I CCNGG 3 cut(s) 525, 913, 1563
TaaI ACNGT 1 cut(s) 1891
TauI GCSGC 1 cut(s) 913
TfiI GAWTC 6 cut(s) 284, 599, 630, 1172, 1197, 1319
Tru1I TTAA 4 cut(s) 303, 677, 1068, 1542
Tru9I TTAA 4 cut(s) 303, 677, 1068, 1542
TscAI CASTG 2 cut(s) 567, 977
TseFI GTSAC 6 cut(s) 181, 264, 513, 946, 1253, 1759
TseI GCWGC 4 cut(s) 107, 218, 231, 1766
Tsp45I GTSAC 6 cut(s) 181, 264, 513, 946, 1253, 1759
TspGWI ACGGA 1 cut(s) 1671
TspRI CASTG 2 cut(s) 567, 977
VpaK11BI GGWCC 2 cut(s) 1556, 1666
XapI RAATTY 7 cut(s) 157, 605, 611, 855, 1544, 1659, 1786
XceI RCATGY 4 cut(s) 389, 1007, 1023, 1725
XcmI CCANNNNNNNNNTGG 1 cut(s) 584
XmiI GTMKAC 1 cut(s) 164
XspI CTAG 2 cut(s) 710, 1310
Zsp2I ATGCAT 2 cut(s) 1021, 1471
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.