MD05G1020300.v1.1

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
3477336 .. 3478607
1272 bp
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UTR
Exon/CDS
Intron
MD05G1020300.v1.1.491

Sequence Viewer

Length: 192 bp
ATGCGACCAAGAGTTGCTCTGAACATTGCTGAAGCATTGGATTACTGCAGTAGTGAAGGCCACCCATTGTACCATGACTTAAATTCTTATATGGTTCTCTTTGATGAGATGAGGCTGAACCAAAGTGTAAGGCAAAACGTTGGCTTCACTGGAAGAAAGAAAAAAAATCTGCAAAAGGGGCAACTGAAGTGA

Protein Analysis

64

Amino Acids

7.31

Weight (kDa)

9.58

Isoelectric Point (pI)

41.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclI AACGTT 1 cut(s) 138
AcsI RAATTY 1 cut(s) 82
AcuI CTGAAG 1 cut(s) 51
AfaI GTAC 1 cut(s) 71
AoxI GGCC 1 cut(s) 58
ApoI RAATTY 1 cut(s) 82
BfmI CTRYAG 1 cut(s) 46
Bse1I ACTGG 1 cut(s) 154
Bse3DI GCAATG 1 cut(s) 24
BseMI GCAATG 1 cut(s) 24
BseNI ACTGG 1 cut(s) 154
BshFI GGCC 1 cut(s) 60
BsnI GGCC 1 cut(s) 60
BspANI GGCC 1 cut(s) 60
BspMAI CTGCAG 1 cut(s) 50
BsrDI GCAATG 1 cut(s) 24
BsrI ACTGG 1 cut(s) 154
BstMWI GCNNNNNNNGC 1 cut(s) 178
BstSFI CTRYAG 1 cut(s) 46
BsuRI GGCC 1 cut(s) 60
BtsIMutI CAGTG 1 cut(s) 147
Csp6I GTAC 1 cut(s) 70
CviAII CATG 1 cut(s) 74
CviJI RGCY 3 cut(s) 60, 115, 144
CviKI_1 RGCY 3 cut(s) 60, 115, 144
CviQI GTAC 1 cut(s) 70
Eco57I CTGAAG 1 cut(s) 51
FaeI CATG 1 cut(s) 77
FaiI YATR 3 cut(s) 75, 90, 92
FatI CATG 1 cut(s) 73
HaeIII GGCC 1 cut(s) 60
Hin1II CATG 1 cut(s) 77
Hpy188I TCNGA 1 cut(s) 21
HpyAV CCTTC 1 cut(s) 50
HpyCH4IV ACGT 1 cut(s) 138
HpyCH4V TGCA 2 cut(s) 48, 172
HpyF10VI GCNNNNNNNGC 1 cut(s) 178
HpySE526I ACGT 1 cut(s) 138
Hsp92II CATG 1 cut(s) 77
LpnPI CCDG 1 cut(s) 135
MaeII ACGT 1 cut(s) 138
MboII GAAGA 1 cut(s) 165
MluCI AATT 1 cut(s) 82
MnlI CCTC 1 cut(s) 105
MseI TTAA 1 cut(s) 80
MwoI GCNNNNNNNGC 1 cut(s) 178
NlaIII CATG 1 cut(s) 77
Psp1406I AACGTT 1 cut(s) 138
PstI CTGCAG 1 cut(s) 50
RsaI GTAC 1 cut(s) 71
RsaNI GTAC 1 cut(s) 70
SaqAI TTAA 1 cut(s) 80
SetI ASST 1 cut(s) 141
SfcI CTRYAG 1 cut(s) 46
SgeI CNNG 3 cut(s) 21, 86, 162
Sse9I AATT 1 cut(s) 82
TaiI ACGT 1 cut(s) 141
TasI AATT 1 cut(s) 82
Tru1I TTAA 1 cut(s) 80
Tru9I TTAA 1 cut(s) 80
TscAI CASTG 1 cut(s) 154
TspRI CASTG 1 cut(s) 154
XapI RAATTY 1 cut(s) 82
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.