Rh5BG460400

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Forward (+)
73629562 .. 73630604
1043 bp
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UTR
Exon/CDS
Intron
Rh5BG460400.1

Sequence Viewer

Length: 240 bp
ATGAATTCCAAGGGACCTCAGTTGAGGCATTCGGATTGGATGACTAGCTTAATGGATATATCTTTCGATTTGGCAGGAAGAGTGATGCCAGAAAGTTTGATTTACGACTTTGGGACCTTACTGCTTGATCTGCTTAGAGGCAGGCATACCCCAGCAAACCATGTTCCATCACGCGTTTTGATGGATATTCCACATGGGAATGTGCCTCCGAAACAGTTGTCACCTCTGGTTCAACTTTAA

Protein Analysis

79

Amino Acids

8.87

Weight (kDa)

6.9

Isoelectric Point (pI)

54.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 174
AcsI RAATTY 1 cut(s) 4
AflIII ACRYGT 1 cut(s) 172
AgsI TTSAA 1 cut(s) 233
AluBI AGCT 1 cut(s) 48
AluI AGCT 1 cut(s) 48
ApoI RAATTY 1 cut(s) 4
ArsI GACNNNNNNTTYG 2 cut(s) 203, 235
AspS9I GGNCC 2 cut(s) 14, 114
AsuHPI GGTGA 1 cut(s) 213
AvaII GGWCC 2 cut(s) 14, 114
BccI CCATC 2 cut(s) 175, 175
BfaI CTAG 1 cut(s) 45
Bme18I GGWCC 2 cut(s) 14, 114
BmgT120I GGNCC 2 cut(s) 14, 114
BmiI GGNNCC 2 cut(s) 15, 115
BmsI GCATC 1 cut(s) 75
BsaJI CCNNGG 1 cut(s) 9
BseDI CCNNGG 1 cut(s) 9
BseGI GGATG 1 cut(s) 45
BseMII CTCAG 1 cut(s) 32
BseYI CCCAGC 1 cut(s) 151
Bsh1236I CGCG 1 cut(s) 174
BslFI GGGAC 2 cut(s) 27, 127
BsmFI GGGAC 2 cut(s) 27, 127
BsmI GAATGC 1 cut(s) 28
Bsp143I GATC 1 cut(s) 127
BspCNI CTCAG 1 cut(s) 31
BspFNI CGCG 1 cut(s) 174
BspLI GGNNCC 2 cut(s) 15, 115
BssECI CCNNGG 1 cut(s) 9
BssMI GATC 1 cut(s) 127
BssT1I CCWWGG 1 cut(s) 9
Bst4CI ACNGT 1 cut(s) 216
Bst6I CTCTTC 1 cut(s) 73
BstC8I GCNNGC 1 cut(s) 143
BstDEI CTNAG 2 cut(s) 18, 134
BstF5I GGATG 1 cut(s) 45
BstFNI CGCG 1 cut(s) 174
BstKTI GATC 1 cut(s) 130
BstMBI GATC 1 cut(s) 127
BstMWI GCNNNNNNNGC 1 cut(s) 130
BstUI CGCG 1 cut(s) 174
BtsCI GGATG 1 cut(s) 45
Cac8I GCNNGC 1 cut(s) 143
Cfr13I GGNCC 2 cut(s) 14, 114
CviAII CATG 2 cut(s) 161, 194
CviJI RGCY 1 cut(s) 48
CviKI_1 RGCY 1 cut(s) 48
DdeI CTNAG 2 cut(s) 18, 134
DpnI GATC 1 cut(s) 129
DpnII GATC 1 cut(s) 127
Eam1104I CTCTTC 1 cut(s) 73
EarI CTCTTC 1 cut(s) 73
Eco130I CCWWGG 1 cut(s) 9
Eco47I GGWCC 2 cut(s) 14, 114
EcoO109I RGGNCCY 2 cut(s) 14, 114
EcoRI GAATTC 1 cut(s) 4
EcoT14I CCWWGG 1 cut(s) 9
ErhI CCWWGG 1 cut(s) 9
FaeI CATG 2 cut(s) 164, 197
FaiI YATR 4 cut(s) 59, 147, 162, 195
FaqI GGGAC 2 cut(s) 27, 127
FatI CATG 2 cut(s) 160, 193
FokI GGATG 1 cut(s) 52
FspBI CTAG 1 cut(s) 45
GsaI CCCAGC 1 cut(s) 155
Hin1II CATG 2 cut(s) 164, 197
HphI GGTGA 1 cut(s) 213
Hpy188I TCNGA 2 cut(s) 34, 210
HpyCH4III ACNGT 1 cut(s) 216
HpyF10VI GCNNNNNNNGC 1 cut(s) 130
HpyF3I CTNAG 2 cut(s) 18, 134
Hsp92II CATG 2 cut(s) 164, 197
Kzo9I GATC 1 cut(s) 127
LpnPI CCDG 5 cut(s) 60, 102, 127, 165, 212
LweI GCATC 1 cut(s) 75
MaeI CTAG 1 cut(s) 45
MaeIII GTNAC 1 cut(s) 219
MalI GATC 1 cut(s) 129
MboI GATC 1 cut(s) 127
MboII GAAGA 1 cut(s) 90
MluCI AATT 1 cut(s) 4
MluI ACGCGT 1 cut(s) 172
MnlI CCTC 5 cut(s) 18, 27, 131, 216, 234
MseI TTAA 2 cut(s) 50, 238
MslI CAYNNNNRTG 1 cut(s) 198
Mva1269I GAATGC 1 cut(s) 28
MvnI CGCG 1 cut(s) 174
MwoI GCNNNNNNNGC 1 cut(s) 130
NdeII GATC 1 cut(s) 127
NlaIII CATG 2 cut(s) 164, 197
NlaIV GGNNCC 2 cut(s) 15, 115
NmuCI GTSAC 1 cut(s) 219
PctI GAATGC 1 cut(s) 28
PpuMI RGGWCCY 2 cut(s) 14, 114
Psp5II RGGWCCY 2 cut(s) 14, 114
PspFI CCCAGC 1 cut(s) 151
PspN4I GGNNCC 2 cut(s) 15, 115
PspPI GGNCC 2 cut(s) 14, 114
PspPPI RGGWCCY 2 cut(s) 14, 114
RseI CAYNNNNRTG 1 cut(s) 198
SaqAI TTAA 2 cut(s) 50, 238
Sau3AI GATC 1 cut(s) 127
Sau96I GGNCC 2 cut(s) 14, 114
SetI ASST 4 cut(s) 19, 50, 119, 226
SfaNI GCATC 1 cut(s) 75
SinI GGWCC 2 cut(s) 14, 114
SmiMI CAYNNNNRTG 1 cut(s) 198
Sse9I AATT 1 cut(s) 4
SspMI CTAG 1 cut(s) 45
StyI CCWWGG 1 cut(s) 9
TaaI ACNGT 1 cut(s) 216
TaqI TCGA 1 cut(s) 66
TasI AATT 1 cut(s) 4
Tru1I TTAA 2 cut(s) 50, 238
Tru9I TTAA 2 cut(s) 50, 238
TseFI GTSAC 1 cut(s) 219
Tsp45I GTSAC 1 cut(s) 219
TspDTI ATGAA 1 cut(s) 17
VpaK11BI GGWCC 2 cut(s) 14, 114
XapI RAATTY 1 cut(s) 4
XspI CTAG 1 cut(s) 45
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.