Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0014816

Physical Location & Seq

Genomic Coordinates Reverse (-)

4534253 .. 4535333

Gene Structure 1081 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G065500.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 426 bp

ATGTGCTTTAAGTTAAAGCTATATCTTCTTGTGCCTCATTCTCAGCATCTCCTGATCATACAACTGGCTTTAAATGTTTATGAACTGGATTATGATTACAATTCCATACAGACCAGTTGTCATATTAAGGAGGCTCTAGCTAAATACTTTTCATTCCTTTTCCTTTCTTGGAAGGCACTTGACCTCGTACGCGGTAAAAACGTCAAGAGGCTGATGGATCCATACTTGGAAGGCCAGTTCTCAAATGATGATGTAACTAAGTTAGTGCAGTTGGCTTCACAGTGTTTGCAGCATGAACCTCTCGAGAGGCCAAATGCCAAGTTTCTTTTGACTGCCCTCATTCCTCTTCAGAAAGAAACTGAGCAGGTTCCATCATACGTTCTGATGGGTATTCCACCTGGAAATGTGCCTCCATTTGAGACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009506 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0030054 GO:0032870 GO:0033993 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043401 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048545 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

142

Amino Acids

16.24

Weight (kDa)

6.4

Isoelectric Point (pI)

35.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014816)

Species	Orthologous Gene IDs
malus_domestica	MD01G1088500.v1.1 MD05G1020300.v1.1 MD11G1085100.v1.1
prunus_persica	Prupe.6G065500_v2.0.a1 Prupe.6G065500_v2.0.a1
pyrus_communis	pycom01g08590 pycom07g06710 pycom12g14880
rosa_multiflora	Rmu_co8319927.1_g000001 Rmu_sc0000015.1_g000004
rosa_roxburghii	Rroxscaffold_1G00013800 Rroxscaffold_1G00013810
rosa_rugosa	Rorug05G0383900
rosa_samantha	Rh3DG134600 Rh5BG460400 Rh5CG482700 Rh5DG475500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	355
AccII	CGCG	1 cut(s)	192
AciI	CCGC	1 cut(s)	192
AclWI	GGATC	2 cut(s)	212, 225
AcuI	CTGAAG	1 cut(s)	332
AfaI	GTAC	1 cut(s)	189
AhdI	GACNNNNNGTC	1 cut(s)	117
AjnI	CCWGG	1 cut(s)	397
AloI	GAACNNNNNNTCC	2 cut(s)	221, 253
AluBI	AGCT	2 cut(s)	19, 140
AluI	AGCT	2 cut(s)	19, 140
Alw26I	GTCTC	1 cut(s)	413
AlwI	GGATC	2 cut(s)	212, 225
Ama87I	CYCGRG	1 cut(s)	302
AoxI	GGCC	2 cut(s)	232, 308
ApeKI	GCWGC	1 cut(s)	289
AvaI	CYCGRG	1 cut(s)	302
BamHI	GGATCC	1 cut(s)	217
BbvI	GCAGC	1 cut(s)	301
BccI	CCATC	3 cut(s)	208, 379, 379
BciT130I	CCWGG	1 cut(s)	399
BclI	TGATCA	1 cut(s)	54
BcoDI	GTCTC	1 cut(s)	413
BfaI	CTAG	1 cut(s)	137
BfuAI	ACCTGC	1 cut(s)	355
BisI	GCNGC	1 cut(s)	290
BlsI	GCNGC	1 cut(s)	291
Bme1390I	CCNGG	1 cut(s)	399
BmeRI	GACNNNNNGTC	1 cut(s)	117
BmeT110I	CYCGRG	1 cut(s)	302
BmiI	GGNNCC	2 cut(s)	219, 369
BmrFI	CCNGG	1 cut(s)	399
BmsI	GCATC	1 cut(s)	55
Bse1I	ACTGG	4 cut(s)	69, 90, 114, 235
BseBI	CCWGG	1 cut(s)	399
BseMII	CTCAG	2 cut(s)	56, 351
BseNI	ACTGG	4 cut(s)	69, 90, 114, 235
BseXI	GCAGC	1 cut(s)	301
BsgI	GTGCAG	1 cut(s)	287
Bsh1236I	CGCG	1 cut(s)	192
BshFI	GGCC	2 cut(s)	234, 310
BsiHKCI	CYCGRG	1 cut(s)	302
BsiWI	CGTACG	1 cut(s)	187
BsmAI	GTCTC	1 cut(s)	413
BsnI	GGCC	2 cut(s)	234, 310
BsoBI	CYCGRG	1 cut(s)	302
Bsp143I	GATC	2 cut(s)	54, 217
BspACI	CCGC	1 cut(s)	192
BspANI	GGCC	2 cut(s)	234, 310
BspCNI	CTCAG	2 cut(s)	55, 352
BspFNI	CGCG	1 cut(s)	192
BspLI	GGNNCC	2 cut(s)	219, 369
BspMI	ACCTGC	1 cut(s)	355
BspPI	GGATC	2 cut(s)	212, 225
BsrI	ACTGG	4 cut(s)	69, 90, 114, 235
BssMI	GATC	2 cut(s)	54, 217
Bst2UI	CCWGG	1 cut(s)	399
Bst4CI	ACNGT	1 cut(s)	282
Bst6I	CTCTTC	1 cut(s)	351
BstDEI	CTNAG	3 cut(s)	42, 258, 360
BstFNI	CGCG	1 cut(s)	192
BstKTI	GATC	2 cut(s)	57, 220
BstMAI	GTCTC	1 cut(s)	413
BstMBI	GATC	2 cut(s)	54, 217
BstNI	CCWGG	1 cut(s)	399
BstSCI	CCNGG	1 cut(s)	397
BstUI	CGCG	1 cut(s)	192
BstV1I	GCAGC	1 cut(s)	301
BstX2I	RGATCY	1 cut(s)	217
BstYI	RGATCY	1 cut(s)	217
BsuRI	GGCC	2 cut(s)	234, 310
BtsIMutI	CAGTG	1 cut(s)	287
BveI	ACCTGC	1 cut(s)	355
Csp6I	GTAC	1 cut(s)	188
CviAII	CATG	1 cut(s)	293
CviJI	RGCY	8 cut(s)	19, 68, 134, 140, 211, 234, 275, 310
CviKI_1	RGCY	8 cut(s)	19, 68, 134, 140, 211, 234, 275, 310
CviQI	GTAC	1 cut(s)	188
DdeI	CTNAG	3 cut(s)	42, 258, 360
DpnI	GATC	2 cut(s)	56, 219
DpnII	GATC	2 cut(s)	54, 217
DraI	TTTAAA	1 cut(s)	72
DriI	GACNNNNNGTC	1 cut(s)	117
Eam1104I	CTCTTC	1 cut(s)	351
Eam1105I	GACNNNNNGTC	1 cut(s)	117
EarI	CTCTTC	1 cut(s)	351
Eco57I	CTGAAG	1 cut(s)	332
Eco88I	CYCGRG	1 cut(s)	302
EcoRII	CCWGG	1 cut(s)	397
FaeI	CATG	1 cut(s)	296
FatI	CATG	1 cut(s)	292
FbaI	TGATCA	1 cut(s)	54
Fnu4HI	GCNGC	1 cut(s)	290
Fsp4HI	GCNGC	1 cut(s)	290
FspBI	CTAG	1 cut(s)	137
GluI	GCNGC	1 cut(s)	290
HaeIII	GGCC	2 cut(s)	234, 310
Hin1II	CATG	1 cut(s)	296
Hpy188I	TCNGA	2 cut(s)	351, 384
Hpy188III	TCNNGA	4 cut(s)	52, 205, 302, 304
HpyAV	CCTTC	2 cut(s)	166, 224
HpyCH4III	ACNGT	1 cut(s)	282
HpyCH4IV	ACGT	2 cut(s)	201, 378
HpyCH4V	TGCA	2 cut(s)	268, 289
HpyF3I	CTNAG	3 cut(s)	42, 258, 360
HpySE526I	ACGT	2 cut(s)	201, 378
Hsp92II	CATG	1 cut(s)	296
Ksp22I	TGATCA	1 cut(s)	54
Kzo9I	GATC	2 cut(s)	54, 217
LpnPI	CCDG	8 cut(s)	50, 65, 71, 127, 248, 350, 384, 411
Lsp1109I	GCAGC	1 cut(s)	301
LweI	GCATC	1 cut(s)	55
MaeI	CTAG	1 cut(s)	137
MaeII	ACGT	2 cut(s)	201, 378
MaeIII	GTNAC	1 cut(s)	253
MalI	GATC	2 cut(s)	56, 219
MboI	GATC	2 cut(s)	54, 217
MboII	GAAGA	2 cut(s)	17, 338
MflI	RGATCY	1 cut(s)	217
MluCI	AATT	1 cut(s)	100
MnlI	CCTC	9 cut(s)	45, 124, 194, 201, 300, 309, 347, 354, 420
MseI	TTAA	4 cut(s)	9, 14, 71, 126
MspR9I	CCNGG	1 cut(s)	399
MvaI	CCWGG	1 cut(s)	399
MvnI	CGCG	1 cut(s)	192
NdeII	GATC	2 cut(s)	54, 217
NlaIII	CATG	1 cut(s)	296
NlaIV	GGNNCC	2 cut(s)	219, 369
PaeR7I	CTCGAG	1 cut(s)	302
Pfl23II	CGTACG	1 cut(s)	187
PkrI	GCNGC	1 cut(s)	291
Psp6I	CCWGG	1 cut(s)	397
PspGI	CCWGG	1 cut(s)	397
PspLI	CGTACG	1 cut(s)	187
PspN4I	GGNNCC	2 cut(s)	219, 369
PsuI	RGATCY	1 cut(s)	217
RsaI	GTAC	1 cut(s)	189
RsaNI	GTAC	1 cut(s)	188
SaqAI	TTAA	4 cut(s)	9, 14, 71, 126
SatI	GCNGC	1 cut(s)	290
Sau3AI	GATC	2 cut(s)	54, 217
ScrFI	CCNGG	1 cut(s)	399
SetI	ASST	8 cut(s)	21, 142, 186, 204, 301, 369, 381, 400
SfaNI	GCATC	1 cut(s)	55
Sfr274I	CTCGAG	1 cut(s)	302
SlaI	CTCGAG	1 cut(s)	302
SmlI	CTYRAG	1 cut(s)	302
SmoI	CTYRAG	1 cut(s)	302
Sse9I	AATT	1 cut(s)	100
SsiI	CCGC	1 cut(s)	192
SspMI	CTAG	1 cut(s)	137
StyD4I	CCNGG	1 cut(s)	397
TaaI	ACNGT	1 cut(s)	282
TaiI	ACGT	2 cut(s)	204, 381
TaqI	TCGA	1 cut(s)	303
TasI	AATT	1 cut(s)	100
Tru1I	TTAA	4 cut(s)	9, 14, 71, 126
Tru9I	TTAA	4 cut(s)	9, 14, 71, 126
TscAI	CASTG	1 cut(s)	287
TseI	GCWGC	1 cut(s)	289
TspDTI	ATGAA	3 cut(s)	96, 141, 309
TspRI	CASTG	1 cut(s)	287
XhoI	CTCGAG	1 cut(s)	302
XspI	CTAG	1 cut(s)	137

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.