Rmu_co8319927.1_g000001

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8319927.1
Physical Location & Seq
Forward (+)
58 .. 710
653 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8319927.1_g000001.1.cds

Sequence Viewer

Length: 324 bp
atgcgtttaagagtagctcttcatattgctgaagctttagattattgtagtactgagggccgtccattataccatgatttgaatgcttatagggttctctttgatgaggatggtgatccacgtctttcatgttttggcttgatgagaaatagtagggatgggaagagttatagcacaaatctggcctatacaccaccagagtacttaagaaatggaagggtcactccagaaagtgttatctacagttttggaactgtccttctagacttgctaagtggaaagcacatccctccaagtcattcatcttcaagtgtgtcaagttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

107

Amino Acids

11.95

Weight (kDa)

6.39

Isoelectric Point (pI)

43.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 110
AcuI CTGAAG 1 cut(s) 51
AfaI GTAC 2 cut(s) 52, 203
AflII CTTAAG 1 cut(s) 205
AgsI TTSAA 2 cut(s) 82, 309
AjiI CACGTC 1 cut(s) 122
AluBI AGCT 2 cut(s) 17, 35
AluI AGCT 2 cut(s) 17, 35
AlwI GGATC 1 cut(s) 110
AoxI GGCC 2 cut(s) 58, 183
AspS9I GGNCC 1 cut(s) 58
AsuHPI GGTGA 1 cut(s) 125
BccI CCATC 2 cut(s) 104, 152
BceAI ACGGC 1 cut(s) 45
BfaI CTAG 1 cut(s) 263
BfmI CTRYAG 1 cut(s) 241
BfrI CTTAAG 1 cut(s) 205
BmcAI AGTACT 2 cut(s) 52, 203
BmgBI CACGTC 1 cut(s) 122
BmgT120I GGNCC 1 cut(s) 58
BpmI CTGGAG 1 cut(s) 210
BsaBI GATNNNNATC 1 cut(s) 114
Bse8I GATNNNNATC 1 cut(s) 114
BseGI GGATG 3 cut(s) 115, 163, 285
BseJI GATNNNNATC 1 cut(s) 114
BseMII CTCAG 1 cut(s) 45
BshFI GGCC 2 cut(s) 60, 185
BsmI GAATGC 1 cut(s) 88
BsnI GGCC 2 cut(s) 60, 185
Bsp143I GATC 1 cut(s) 115
BspANI GGCC 2 cut(s) 60, 185
BspCNI CTCAG 1 cut(s) 46
BspPI GGATC 1 cut(s) 110
BspQI GCTCTTC 1 cut(s) 24
BspTI CTTAAG 1 cut(s) 205
BssMI GATC 1 cut(s) 115
Bst4CI ACNGT 2 cut(s) 245, 256
Bst6I CTCTTC 2 cut(s) 24, 158
BstAFI CTTAAG 1 cut(s) 205
BstDEI CTNAG 2 cut(s) 54, 272
BstF5I GGATG 3 cut(s) 115, 163, 285
BstKTI GATC 1 cut(s) 118
BstMBI GATC 1 cut(s) 115
BstSFI CTRYAG 1 cut(s) 241
BsuRI GGCC 2 cut(s) 60, 185
BtrI CACGTC 1 cut(s) 122
BtsCI GGATG 3 cut(s) 115, 163, 285
Cfr13I GGNCC 1 cut(s) 58
Csp6I GTAC 2 cut(s) 51, 202
CviAII CATG 2 cut(s) 74, 129
CviJI RGCY 5 cut(s) 17, 35, 60, 138, 185
CviKI_1 RGCY 5 cut(s) 17, 35, 60, 138, 185
CviQI GTAC 2 cut(s) 51, 202
DdeI CTNAG 2 cut(s) 54, 272
DpnI GATC 1 cut(s) 117
DpnII GATC 1 cut(s) 115
Eam1104I CTCTTC 2 cut(s) 24, 158
EarI CTCTTC 2 cut(s) 24, 158
Eco57I CTGAAG 1 cut(s) 51
FaeI CATG 2 cut(s) 77, 132
FaiI YATR 7 cut(s) 24, 70, 75, 90, 130, 171, 189
FatI CATG 2 cut(s) 73, 128
FokI GGATG 3 cut(s) 122, 170, 272
FspBI CTAG 1 cut(s) 263
GsuI CTGGAG 1 cut(s) 210
HaeIII GGCC 2 cut(s) 60, 185
Hin1II CATG 2 cut(s) 77, 132
HindIII AAGCTT 1 cut(s) 33
HphI GGTGA 1 cut(s) 125
Hpy188III TCNNGA 2 cut(s) 227, 263
HpyAV CCTTC 2 cut(s) 210, 269
HpyCH4III ACNGT 2 cut(s) 245, 256
HpyCH4IV ACGT 1 cut(s) 121
HpyF3I CTNAG 2 cut(s) 54, 272
HpySE526I ACGT 1 cut(s) 121
Hsp92II CATG 2 cut(s) 77, 132
Kzo9I GATC 1 cut(s) 115
LguI GCTCTTC 1 cut(s) 24
LpnPI CCDG 3 cut(s) 167, 210, 240
MaeI CTAG 1 cut(s) 263
MaeII ACGT 1 cut(s) 121
MaeIII GTNAC 1 cut(s) 220
MalI GATC 1 cut(s) 117
MboI GATC 1 cut(s) 115
MboII GAAGA 3 cut(s) 11, 175, 297
MnlI CCTC 3 cut(s) 49, 100, 300
MseI TTAA 3 cut(s) 8, 206, 322
MspCI CTTAAG 1 cut(s) 205
Mva1269I GAATGC 1 cut(s) 88
NdeII GATC 1 cut(s) 115
NlaIII CATG 2 cut(s) 77, 132
NmuCI GTSAC 1 cut(s) 220
PciSI GCTCTTC 1 cut(s) 24
PctI GAATGC 1 cut(s) 88
PspPI GGNCC 1 cut(s) 58
RsaI GTAC 2 cut(s) 52, 203
RsaNI GTAC 2 cut(s) 51, 202
SapI GCTCTTC 1 cut(s) 24
SaqAI TTAA 3 cut(s) 8, 206, 322
Sau3AI GATC 1 cut(s) 115
Sau96I GGNCC 1 cut(s) 58
ScaI AGTACT 2 cut(s) 52, 203
SetI ASST 3 cut(s) 19, 37, 124
SfcI CTRYAG 1 cut(s) 241
SmlI CTYRAG 1 cut(s) 205
SmoI CTYRAG 1 cut(s) 205
SspMI CTAG 1 cut(s) 263
TaaI ACNGT 2 cut(s) 245, 256
TaiI ACGT 1 cut(s) 124
TatI WGTACW 2 cut(s) 50, 201
Tru1I TTAA 3 cut(s) 8, 206, 322
Tru9I TTAA 3 cut(s) 8, 206, 322
TseFI GTSAC 1 cut(s) 220
Tsp45I GTSAC 1 cut(s) 220
TspDTI ATGAA 3 cut(s) 11, 117, 291
Vha464I CTTAAG 1 cut(s) 205
XbaI TCTAGA 1 cut(s) 262
XspI CTAG 1 cut(s) 263
ZrmI AGTACT 2 cut(s) 52, 203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.