Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0014816

Physical Location & Seq

Genomic Coordinates Forward (+)

7178147 .. 7178701

Gene Structure 555 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1085100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 291 bp

ATGGCAATTAGCATCAGCATCTTTGGACTTGTAGCTCTACGCGAGATCCATGGTCTTTCGTTTAGTGTATTTACATCTTTCTATTTGCTAGGAAGAGTGATACAGGAAACTTTGGTTTACAACTTCGGAACCCTATTGCTTGATCTGCTCAGTGACAGACATATCCTCCCAAGTCATTACGAACCTCGTGATAGGCCATATTTCAGTCTCTTTGCGAAATGCAGGGAAGACAGCGCTTTAAGTAGCATGGGAATGCGGCATTTCGAGCAAAAGACTTCACGGCCGCAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009506 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0030054 GO:0032870 GO:0033993 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043401 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048545 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

97

Amino Acids

11.07

Weight (kDa)

7.97

Isoelectric Point (pI)

49.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014816)

Species	Orthologous Gene IDs
malus_domestica	MD01G1088500.v1.1 MD05G1020300.v1.1 MD11G1085100.v1.1
prunus_persica	Prupe.6G065500_v2.0.a1 Prupe.6G065500_v2.0.a1
pyrus_communis	pycom01g08590 pycom07g06710 pycom12g14880
rosa_multiflora	Rmu_co8319927.1_g000001 Rmu_sc0000015.1_g000004
rosa_roxburghii	Rroxscaffold_1G00013800 Rroxscaffold_1G00013810
rosa_rugosa	Rorug05G0383900
rosa_samantha	Rh3DG134600 Rh5BG460400 Rh5CG482700 Rh5DG475500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	42
AciI	CCGC	2 cut(s)	256, 284
AclWI	GGATC	1 cut(s)	40
AcoI	YGGCCR	1 cut(s)	281
AfeI	AGCGCT	1 cut(s)	235
AluBI	AGCT	1 cut(s)	35
AluI	AGCT	1 cut(s)	35
Alw26I	GTCTC	1 cut(s)	212
AlwI	GGATC	1 cut(s)	40
Aor51HI	AGCGCT	1 cut(s)	235
AoxI	GGCC	2 cut(s)	194, 281
AspLEI	GCGC	1 cut(s)	236
BauI	CACGAG	1 cut(s)	186
BbsI	GAAGAC	1 cut(s)	234
BcoDI	GTCTC	1 cut(s)	212
BfaI	CTAG	1 cut(s)	89
BfoI	RGCGCY	1 cut(s)	237
BisI	GCNGC	2 cut(s)	257, 284
BlsI	GCNGC	2 cut(s)	258, 285
BmiI	GGNNCC	1 cut(s)	130
BmsI	GCATC	2 cut(s)	21, 27
BpiI	GAAGAC	1 cut(s)	234
BsaJI	CCNNGG	1 cut(s)	49
BsaXI	ACNNNNNCTCC	2 cut(s)	150, 180
BseDI	CCNNGG	1 cut(s)	49
BseMII	CTCAG	1 cut(s)	163
BseX3I	CGGCCG	1 cut(s)	281
Bsh1236I	CGCG	1 cut(s)	42
Bsh1285I	CGRYCG	1 cut(s)	284
BshFI	GGCC	2 cut(s)	196, 283
BsiEI	CGRYCG	1 cut(s)	284
BsmAI	GTCTC	1 cut(s)	212
BsmI	GAATGC	1 cut(s)	258
BsnI	GGCC	2 cut(s)	196, 283
Bsp143I	GATC	2 cut(s)	45, 142
Bsp19I	CCATGG	1 cut(s)	49
BspACI	CCGC	2 cut(s)	256, 284
BspANI	GGCC	2 cut(s)	196, 283
BspCNI	CTCAG	1 cut(s)	162
BspFNI	CGCG	1 cut(s)	42
BspLI	GGNNCC	1 cut(s)	130
BspPI	GGATC	1 cut(s)	40
BssECI	CCNNGG	1 cut(s)	49
BssMI	GATC	2 cut(s)	45, 142
BssSI	CACGAG	1 cut(s)	186
BssT1I	CCWWGG	1 cut(s)	49
Bst2BI	CACGAG	1 cut(s)	186
Bst6I	CTCTTC	1 cut(s)	88
BstDEI	CTNAG	1 cut(s)	149
BstDSI	CCRYGG	1 cut(s)	49
BstFNI	CGCG	1 cut(s)	42
BstH2I	RGCGCY	1 cut(s)	237
BstHHI	GCGC	1 cut(s)	236
BstKTI	GATC	2 cut(s)	48, 145
BstMAI	GTCTC	1 cut(s)	212
BstMBI	GATC	2 cut(s)	45, 142
BstMCI	CGRYCG	1 cut(s)	284
BstMWI	GCNNNNNNNGC	2 cut(s)	145, 265
BstUI	CGCG	1 cut(s)	42
BstV2I	GAAGAC	1 cut(s)	234
BstX2I	RGATCY	1 cut(s)	45
BstYI	RGATCY	1 cut(s)	45
BstZI	CGGCCG	1 cut(s)	281
BsuRI	GGCC	2 cut(s)	196, 283
BtgI	CCRYGG	1 cut(s)	49
BtsIMutI	CAGTG	1 cut(s)	157
CfoI	GCGC	1 cut(s)	236
CviAII	CATG	2 cut(s)	50, 247
CviJI	RGCY	3 cut(s)	35, 196, 283
CviKI_1	RGCY	3 cut(s)	35, 196, 283
DdeI	CTNAG	1 cut(s)	149
DpnI	GATC	2 cut(s)	47, 144
DpnII	GATC	2 cut(s)	45, 142
EaeI	YGGCCR	1 cut(s)	281
EagI	CGGCCG	1 cut(s)	281
Eam1104I	CTCTTC	1 cut(s)	88
EarI	CTCTTC	1 cut(s)	88
EclXI	CGGCCG	1 cut(s)	281
Eco130I	CCWWGG	1 cut(s)	49
Eco47III	AGCGCT	1 cut(s)	235
Eco52I	CGGCCG	1 cut(s)	281
EcoT14I	CCWWGG	1 cut(s)	49
ErhI	CCWWGG	1 cut(s)	49
FaeI	CATG	2 cut(s)	53, 250
FaiI	YATR	4 cut(s)	51, 162, 199, 248
FatI	CATG	2 cut(s)	49, 246
Fnu4HI	GCNGC	2 cut(s)	257, 284
Fsp4HI	GCNGC	2 cut(s)	257, 284
FspBI	CTAG	1 cut(s)	89
GlaI	GCGC	1 cut(s)	235
GluI	GCNGC	2 cut(s)	257, 284
HaeII	RGCGCY	1 cut(s)	237
HaeIII	GGCC	2 cut(s)	196, 283
HhaI	GCGC	1 cut(s)	236
Hin1II	CATG	2 cut(s)	53, 250
Hin6I	GCGC	1 cut(s)	234
HinP1I	GCGC	1 cut(s)	234
Hpy166II	GTNNAC	1 cut(s)	118
Hpy188I	TCNGA	1 cut(s)	128
Hpy188III	TCNNGA	1 cut(s)	188
Hpy8I	GTNNAC	1 cut(s)	118
HpyCH4V	TGCA	1 cut(s)	222
HpyF10VI	GCNNNNNNNGC	2 cut(s)	145, 265
HpyF3I	CTNAG	1 cut(s)	149
Hsp92II	CATG	2 cut(s)	53, 250
HspAI	GCGC	1 cut(s)	234
Kzo9I	GATC	2 cut(s)	45, 142
LpnPI	CCDG	2 cut(s)	89, 208
LweI	GCATC	2 cut(s)	21, 27
MaeI	CTAG	1 cut(s)	89
MaeIII	GTNAC	1 cut(s)	152
MalI	GATC	2 cut(s)	47, 144
MboI	GATC	2 cut(s)	45, 142
MboII	GAAGA	2 cut(s)	105, 239
MflI	RGATCY	1 cut(s)	45
MluCI	AATT	1 cut(s)	6
MnlI	CCTC	2 cut(s)	176, 195
MseI	TTAA	1 cut(s)	239
MslI	CAYNNNNRTG	1 cut(s)	251
Mva1269I	GAATGC	1 cut(s)	258
MvnI	CGCG	1 cut(s)	42
MwoI	GCNNNNNNNGC	2 cut(s)	145, 265
NcoI	CCATGG	1 cut(s)	49
NdeII	GATC	2 cut(s)	45, 142
NlaIII	CATG	2 cut(s)	53, 250
NlaIV	GGNNCC	1 cut(s)	130
NmuCI	GTSAC	1 cut(s)	152
PctI	GAATGC	1 cut(s)	258
PkrI	GCNGC	2 cut(s)	258, 285
PspN4I	GGNNCC	1 cut(s)	130
PsuI	RGATCY	1 cut(s)	45
RseI	CAYNNNNRTG	1 cut(s)	251
SaqAI	TTAA	1 cut(s)	239
SatI	GCNGC	2 cut(s)	257, 284
Sau3AI	GATC	2 cut(s)	45, 142
SetI	ASST	2 cut(s)	37, 187
SfaNI	GCATC	2 cut(s)	21, 27
SmiMI	CAYNNNNRTG	1 cut(s)	251
Sse9I	AATT	1 cut(s)	6
SsiI	CCGC	2 cut(s)	256, 284
SspMI	CTAG	1 cut(s)	89
StyI	CCWWGG	1 cut(s)	49
TaqI	TCGA	1 cut(s)	264
TasI	AATT	1 cut(s)	6
TauI	GCSGC	2 cut(s)	259, 286
Tru1I	TTAA	1 cut(s)	239
Tru9I	TTAA	1 cut(s)	239
TscAI	CASTG	1 cut(s)	157
TseFI	GTSAC	1 cut(s)	152
Tsp45I	GTSAC	1 cut(s)	152
TspRI	CASTG	1 cut(s)	157
XspI	CTAG	1 cut(s)	89

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.