MD05G1186600.v1.1

rpm1 interacting protein 13

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0008119
Physical Location & Seq
Reverse (-)
31470680 .. 31473708
3029 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1186600.v1.1.491

Sequence Viewer

Length: 1767 bp
ATGGATCCGGGTCCAATCTACATAAGCTCCGATGACGAACTGGGCTGGACCGACCTGGATGAGGAGGACAACTTTGATTGGGTATCGGACCTTCTGGAATCTGTCGACAAGGTAACCGATGATGACGATGATGACGATGATGATGATTCCGATGACGTTGTGGTGATTAGTGAGGTCAACTCCAAGCCCAGTAAAAAGTCTTCCAAACGGACGGTGGCGGATGTGGACGATGATTGTGTGGTCTTGGACGGTGACCCGGATAAGCCGGTTTCGGTGGTGGAGGATTCGGGTAGCGGCTCCGACGAGTTGCTTGTGGTTGGGGAGAAGGGGCAGGTAGCATGTAGAGACTACCCTCATCCACGACATCTTTGTGCCAAATTTCCTTTCAAAACTACCCGGCACGAGAACCACTGTGATCTTTGTCACTGTTATGTCTGTGACTCGCTGGCACCATGTGTACACTGGAGCACCAGAGGCTCCAACTTTGATCATTGTCATGCCACGGACAAAGAAGAGACATGGAAAGTACTGAGAAAAGATTTCAAGACAGCAAAAACTGCACCATTATCAGCTTCAAACAATCTGGCACCGACTAAACATAGTCCAGTTCCACCTCTCAATATTATTCGGTTGGCACCCAACTCTTTACCACAGAATCAGGTCTCTAGGCCAGCTACAGTCCGCCCTTGCACCTCAGCCGGTCGTACCATGCCTAGTATCAGAATTCCAAGCAGAAGTCACCAACCAGAATATCTTGTCCCTAAGAACAAAGTCCAACCATGTTCAGTTTCTAAGCAGTTGCTTGGTGCACACACTAATGTTGTTGGGAGGAACCGAGGTCAAAATATTGGTCATTTAGGCCCCGTCTCTTCTCATTCAATGTTCAAAAGAGTAGGAGCTGTTGTGAACCGAAGTACATTTGTTTCGTCAAATAACAGTAGTTGTGCCACTCCATTAATATACAACAGAACTTCCACTCCCATGGCAACATCAAATGGCGGAAACCCCTTGTGGTTGCAGGGTGTTCATTCTAGTGTGCATCAGAACGCCTCCCAGCCCATGACCACTTTCGTTGGAAATACAGTGCCCTCCCAACCCCAAACATATAGTCAGGCCATCCCCCAGTCAATTTACAGCCAAACTTTTCAACAGCAAGGGAATCAAAGTCAAAATGATAGCCAATTTATTTGTCAGTACGCGATACCAAGTCCGGATTCCAGTCAAGGTGTATATCAGTATGGGAATCAGAGTCAGAATTCTAGTCTGCAAGGTAATCTAGGTGTAAGTGTCACAGATTTGGATTTTACGGATTGTAACTGGGTTAACACTTCCAGTCCAAACATTCAGCGGCCTCCAATTCAGCAACCTCCTATTCAGCAGCCTCCAATTCAGCAACCTCCTGTTCAGCAGCCTCCGCTTCAGCAGCCGCCATTTCAGCAACCTCCCATCCAGCAACCTCCCATTCGGCAGCCTCAGTTTCAGCAGCCGCCTCCTATCCAGCAACAGCCTCCCATTGAACTTTCTGAAATTCAAAGCACCGAGCCTGTATCCGAGCCAGCTCCCGTCAATGAGCAGTCTAACAAAGGCGCAAATTTCAATGGTTTGGATACCGAATTTGAAAGCTGGCTCTTTGAAGCCGAGTCTAGTCCGGCTGAATCAAATAATGCGATGGCATCTCACCTGAACATGTTGTCTCCCGAGCCGACTTTTATAGACTCACTCTTGTTTGATTTTGAAACCCCCTGGAATGGTCTGGCGCAGGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

589

Amino Acids

64.67

Weight (kDa)

4.8

Isoelectric Point (pI)

61.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Extensin_1 PF02095 446 - 519 3.8e-12 Extensin-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 322, 1750
AccB1I GGYRCC 3 cut(s) 448, 586, 634
AccI GTMKAC 1 cut(s) 105
AccII CGCG 1 cut(s) 1199
AccIII TCCGGA 1 cut(s) 1210
AciI CCGC 8 cut(s) 218, 294, 682, 999, 1348, 1415, 1427, 1487
AclWI GGATC 1 cut(s) 12
AcsI RAATTY 6 cut(s) 377, 723, 1255, 1527, 1591, 1613
AcuI CTGAAG 1 cut(s) 1403
AdeI CACNNNGTG 1 cut(s) 455
AfaI GTAC 5 cut(s) 459, 528, 706, 916, 1196
AfiI CCNNNNNNNGG 2 cut(s) 61, 1748
AflIII ACRYGT 1 cut(s) 1686
AjnI CCWGG 2 cut(s) 54, 1742
AjuI GAANNNNNNNTTGG 4 cut(s) 368, 400, 1198, 1230
AloI GAACNNNNNNTCC 2 cut(s) 961, 993
AluBI AGCT 6 cut(s) 27, 572, 674, 899, 1559, 1623
AluI AGCT 6 cut(s) 27, 572, 674, 899, 1559, 1623
Alw21I GWGCWC 2 cut(s) 470, 811
Alw26I GTCTC 5 cut(s) 339, 509, 667, 871, 1698
Alw44I GTGCAC 1 cut(s) 807
AlwI GGATC 1 cut(s) 12
Ama87I CYCGRG 1 cut(s) 1697
Aor13HI TCCGGA 1 cut(s) 1210
AoxI GGCC 4 cut(s) 668, 859, 1113, 1349
ApaLI GTGCAC 1 cut(s) 807
ApeKI GCWGC 5 cut(s) 1378, 1408, 1423, 1468, 1483
ApoI RAATTY 6 cut(s) 377, 723, 1255, 1527, 1591, 1613
ArsI GACNNNNNNTTYG 4 cut(s) 835, 867, 1093, 1125
AseI ATTAAT 1 cut(s) 956
AspLEI GCGC 2 cut(s) 1589, 1759
AspS9I GGNCC 4 cut(s) 11, 48, 88, 860
AsuC2I CCSGG 3 cut(s) 9, 257, 397
AsuHPI GGTGA 4 cut(s) 175, 263, 731, 1670
AvaI CYCGRG 1 cut(s) 1697
AvaII GGWCC 3 cut(s) 11, 48, 88
BaeGI GKGCMC 2 cut(s) 811, 1089
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 3 cut(s) 448, 586, 634
BarI GAAGNNNNNNTAC 4 cut(s) 75, 107, 184, 216
BauI CACGAG 1 cut(s) 401
BbsI GAAGAC 1 cut(s) 192
Bbv12I GWGCWC 2 cut(s) 470, 811
BbvCI CCTCAGC 1 cut(s) 694
BbvI GCAGC 5 cut(s) 1390, 1420, 1435, 1480, 1495
BccI CCATC 3 cut(s) 1124, 1454, 1663
BciT130I CCWGG 2 cut(s) 56, 1744
BciVI GTATCC 2 cut(s) 1558, 1600
BclI TGATCA 1 cut(s) 487
BcnI CCSGG 3 cut(s) 9, 257, 397
BcoDI GTCTC 5 cut(s) 339, 509, 667, 871, 1698
BfaI CTAG 6 cut(s) 666, 714, 1032, 1260, 1277, 1644
BfmI CTRYAG 1 cut(s) 675
BfuAI ACCTGC 2 cut(s) 322, 1750
BfuI GTATCC 2 cut(s) 1558, 1600
BisI GCNGC 9 cut(s) 295, 1349, 1379, 1409, 1424, 1427, 1469, 1484, 1487
BlsI GCNGC 9 cut(s) 296, 1350, 1380, 1410, 1425, 1428, 1470, 1485, 1488
BmcAI AGTACT 1 cut(s) 528
Bme1390I CCNGG 5 cut(s) 9, 56, 257, 397, 1744
Bme18I GGWCC 3 cut(s) 11, 48, 88
BmeT110I CYCGRG 1 cut(s) 1697
BmgT120I GGNCC 4 cut(s) 11, 48, 88, 860
BmiI GGNNCC 9 cut(s) 6, 12, 298, 450, 478, 588, 636, 833, 862
BmrFI CCNGG 5 cut(s) 9, 56, 257, 397, 1744
BmrI ACTGGG 4 cut(s) 50, 183, 1117, 1327
BmsI GCATC 2 cut(s) 1048, 1682
BmuI ACTGGG 4 cut(s) 50, 183, 1117, 1327
BpiI GAAGAC 1 cut(s) 192
BplI GAGNNNNNCTC 2 cut(s) 164, 196
BpmI CTGGAG 1 cut(s) 484
Bpu10I CCTNAGC 1 cut(s) 694
BpuMI CCSGG 3 cut(s) 9, 257, 397
BsaI GGTCTC 1 cut(s) 667
BsaJI CCNNGG 4 cut(s) 501, 835, 981, 1742
BsaWI WCCGGW 1 cut(s) 1210
BsaXI ACNNNNNCTCC 6 cut(s) 11, 41, 888, 918, 961, 991
Bsc4I CCNNNNNNNGG 2 cut(s) 61, 1748
Bse118I RCCGGY 2 cut(s) 265, 698
Bse1I ACTGG 8 cut(s) 45, 189, 467, 605, 1123, 1218, 1322, 1332
BseAI TCCGGA 1 cut(s) 1210
BseBI CCWGG 2 cut(s) 56, 1744
BseDI CCNNGG 4 cut(s) 501, 835, 981, 1742
BseGI GGATG 5 cut(s) 64, 226, 355, 1116, 1446
BseLI CCNNNNNNNGG 2 cut(s) 61, 1748
BseMII CTCAG 3 cut(s) 521, 708, 1487
BseNI ACTGG 8 cut(s) 45, 189, 467, 605, 1123, 1218, 1322, 1332
BseRI GAGGAG 1 cut(s) 77
BseSI GKGCMC 2 cut(s) 811, 1089
BseXI GCAGC 5 cut(s) 1390, 1420, 1435, 1480, 1495
BseYI CCCAGC 1 cut(s) 1053
BsgI GTGCAG 1 cut(s) 543
Bsh1236I CGCG 1 cut(s) 1199
Bsh1285I CGRYCG 1 cut(s) 703
BshFI GGCC 4 cut(s) 670, 861, 1115, 1351
BshNI GGYRCC 3 cut(s) 448, 586, 634
BsiEI CGRYCG 1 cut(s) 703
BsiHKAI GWGCWC 2 cut(s) 470, 811
BsiHKCI CYCGRG 1 cut(s) 1697
BsiSI CCGG 7 cut(s) 8, 257, 266, 397, 699, 1211, 1649
BslFI GGGAC 1 cut(s) 743
BslI CCNNNNNNNGG 2 cut(s) 61, 1748
BsmAI GTCTC 5 cut(s) 339, 509, 667, 871, 1698
BsmBI CGTCTC 1 cut(s) 871
BsmFI GGGAC 1 cut(s) 743
BsnI GGCC 4 cut(s) 670, 861, 1115, 1351
Bso31I GGTCTC 1 cut(s) 667
BsoBI CYCGRG 1 cut(s) 1697
Bsp1286I GDGCHC 3 cut(s) 470, 811, 1089
Bsp13I TCCGGA 1 cut(s) 1210
Bsp1407I TGTACA 1 cut(s) 457
Bsp143I GATC 3 cut(s) 4, 415, 487
Bsp19I CCATGG 1 cut(s) 981
BspACI CCGC 8 cut(s) 218, 294, 682, 999, 1348, 1415, 1427, 1487
BspANI GGCC 4 cut(s) 670, 861, 1115, 1351
BspCNI CTCAG 3 cut(s) 522, 707, 1486
BspEI TCCGGA 1 cut(s) 1210
BspFNI CGCG 1 cut(s) 1199
BspLI GGNNCC 9 cut(s) 6, 12, 298, 450, 478, 588, 636, 833, 862
BspMI ACCTGC 2 cut(s) 322, 1750
BspPI GGATC 1 cut(s) 12
BspT107I GGYRCC 3 cut(s) 448, 586, 634
BspTNI GGTCTC 1 cut(s) 667
BsrFI RCCGGY 2 cut(s) 265, 698
BsrGI TGTACA 1 cut(s) 457
BsrI ACTGG 8 cut(s) 45, 189, 467, 605, 1123, 1218, 1322, 1332
BssAI RCCGGY 2 cut(s) 265, 698
BssECI CCNNGG 4 cut(s) 501, 835, 981, 1742
BssMI GATC 3 cut(s) 4, 415, 487
BssSI CACGAG 1 cut(s) 401
BssT1I CCWWGG 1 cut(s) 981
Bst2BI CACGAG 1 cut(s) 401
Bst2UI CCWGG 2 cut(s) 56, 1744
Bst4CI ACNGT 7 cut(s) 214, 251, 413, 428, 679, 938, 1084
Bst6I CTCTTC 2 cut(s) 507, 874
BstAPI GCANNNNNTGC 1 cut(s) 557
BstAUI TGTACA 1 cut(s) 457
BstC8I GCNNGC 4 cut(s) 447, 672, 1557, 1625
BstDEI CTNAG 5 cut(s) 530, 694, 762, 792, 1473
BstDSI CCRYGG 2 cut(s) 501, 981
BstEII GGTNACC 2 cut(s) 112, 251
BstENI CCTNNNNNAGG 1 cut(s) 59
BstF5I GGATG 5 cut(s) 64, 226, 355, 1116, 1446
BstFNI CGCG 1 cut(s) 1199
BstHHI GCGC 2 cut(s) 1589, 1759
BstKTI GATC 3 cut(s) 7, 418, 490
BstMAI GTCTC 5 cut(s) 339, 509, 667, 871, 1698
BstMBI GATC 3 cut(s) 4, 415, 487
BstMCI CGRYCG 1 cut(s) 703
BstMWI GCNNNNNNNGC 5 cut(s) 474, 557, 1414, 1423, 1435
BstNI CCWGG 2 cut(s) 56, 1744
BstNSI RCATGY 2 cut(s) 342, 1690
BstPI GGTNACC 2 cut(s) 112, 251
BstSCI CCNGG 5 cut(s) 7, 54, 255, 395, 1742
BstSFI CTRYAG 1 cut(s) 675
BstSLI GKGCMC 2 cut(s) 811, 1089
BstUI CGCG 1 cut(s) 1199
BstV1I GCAGC 5 cut(s) 1390, 1420, 1435, 1480, 1495
BstV2I GAAGAC 1 cut(s) 192
BstX2I RGATCY 1 cut(s) 4
BstXI CCANNNNNNTGG 1 cut(s) 982
BstYI RGATCY 1 cut(s) 4
BsuI GTATCC 2 cut(s) 1558, 1600
BsuRI GGCC 4 cut(s) 670, 861, 1115, 1351
BtgI CCRYGG 2 cut(s) 501, 981
BtgZI GCGATG 1 cut(s) 1682
BtsCI GGATG 5 cut(s) 64, 226, 355, 1116, 1446
BtsIMutI CAGTG 4 cut(s) 409, 424, 460, 1089
BveI ACCTGC 2 cut(s) 322, 1750
Cac8I GCNNGC 4 cut(s) 447, 672, 1557, 1625
CfoI GCGC 2 cut(s) 1589, 1759
Cfr10I RCCGGY 2 cut(s) 265, 698
Cfr13I GGNCC 4 cut(s) 11, 48, 88, 860
Csp6I GTAC 5 cut(s) 458, 527, 705, 915, 1195
CspCI CAANNNNNGTGG 2 cut(s) 1054, 1089
CviAII CATG 9 cut(s) 339, 453, 497, 519, 709, 780, 982, 1060, 1687
CviQI GTAC 5 cut(s) 458, 527, 705, 915, 1195
DdeI CTNAG 5 cut(s) 530, 694, 762, 792, 1473
DpnI GATC 3 cut(s) 6, 417, 489
DpnII GATC 3 cut(s) 4, 415, 487
DraIII CACNNNGTG 1 cut(s) 455
Eam1104I CTCTTC 2 cut(s) 507, 874
EarI CTCTTC 2 cut(s) 507, 874
EciI GGCGGA 3 cut(s) 233, 671, 1014
Eco130I CCWWGG 1 cut(s) 981
Eco31I GGTCTC 1 cut(s) 667
Eco47I GGWCC 3 cut(s) 11, 48, 88
Eco57I CTGAAG 1 cut(s) 1403
Eco88I CYCGRG 1 cut(s) 1697
Eco91I GGTNACC 2 cut(s) 112, 251
EcoNI CCTNNNNNAGG 1 cut(s) 59
EcoO109I RGGNCCY 1 cut(s) 860
EcoO65I GGTNACC 2 cut(s) 112, 251
EcoRI GAATTC 2 cut(s) 723, 1255
EcoRII CCWGG 2 cut(s) 54, 1742
EcoT14I CCWWGG 1 cut(s) 981
ErhI CCWWGG 1 cut(s) 981
Esp3I CGTCTC 1 cut(s) 871
FaeI CATG 9 cut(s) 342, 456, 500, 522, 712, 783, 985, 1063, 1690
FaqI GGGAC 1 cut(s) 743
FatI CATG 9 cut(s) 338, 452, 496, 518, 708, 779, 981, 1059, 1686
FbaI TGATCA 1 cut(s) 487
FblI GTMKAC 1 cut(s) 105
Fnu4HI GCNGC 9 cut(s) 295, 1349, 1379, 1409, 1424, 1427, 1469, 1484, 1487
FokI GGATG 5 cut(s) 71, 233, 342, 1103, 1433
Fsp4HI GCNGC 9 cut(s) 295, 1349, 1379, 1409, 1424, 1427, 1469, 1484, 1487
FspBI CTAG 6 cut(s) 666, 714, 1032, 1260, 1277, 1644
GlaI GCGC 2 cut(s) 1588, 1758
GluI GCNGC 9 cut(s) 295, 1349, 1379, 1409, 1424, 1427, 1469, 1484, 1487
GsaI CCCAGC 1 cut(s) 1057
GsuI CTGGAG 1 cut(s) 484
HaeIII GGCC 4 cut(s) 670, 861, 1115, 1351
HapII CCGG 7 cut(s) 8, 257, 266, 397, 699, 1211, 1649
HhaI GCGC 2 cut(s) 1589, 1759
Hin1II CATG 9 cut(s) 342, 456, 500, 522, 712, 783, 985, 1063, 1690
Hin6I GCGC 2 cut(s) 1587, 1757
HinP1I GCGC 2 cut(s) 1587, 1757
HincII GTYRAC 3 cut(s) 106, 178, 1324
HindII GTYRAC 3 cut(s) 106, 178, 1324
HpaI GTTAAC 1 cut(s) 1324
HpaII CCGG 7 cut(s) 8, 257, 266, 397, 699, 1211, 1649
HphI GGTGA 4 cut(s) 175, 263, 731, 1670
Hpy166II GTNNAC 8 cut(s) 106, 178, 226, 458, 460, 809, 907, 1324
Hpy188III TCNNGA 4 cut(s) 95, 544, 1211, 1697
Hpy8I GTNNAC 8 cut(s) 106, 178, 226, 458, 460, 809, 907, 1324
Hpy99I CGWCG 1 cut(s) 305
HpyAV CCTTC 2 cut(s) 101, 319
HpyCH4III ACNGT 7 cut(s) 214, 251, 413, 428, 679, 938, 1084
HpyCH4IV ACGT 1 cut(s) 156
HpyCH4V TGCA 6 cut(s) 560, 690, 809, 1018, 1039, 1267
HpyF10VI GCNNNNNNNGC 5 cut(s) 474, 557, 1414, 1423, 1435
HpyF3I CTNAG 5 cut(s) 530, 694, 762, 792, 1473
HpySE526I ACGT 1 cut(s) 156
Hsp92II CATG 9 cut(s) 342, 456, 500, 522, 712, 783, 985, 1063, 1690
HspAI GCGC 2 cut(s) 1587, 1757
Kpn2I TCCGGA 1 cut(s) 1210
Ksp22I TGATCA 1 cut(s) 487
KspAI GTTAAC 1 cut(s) 1324
Kzo9I GATC 3 cut(s) 4, 415, 487
LmnI GCTCC 6 cut(s) 32, 302, 465, 482, 896, 1564
Lsp1109I GCAGC 5 cut(s) 1390, 1420, 1435, 1480, 1495
LweI GCATC 2 cut(s) 1048, 1682
MaeI CTAG 6 cut(s) 666, 714, 1032, 1260, 1277, 1644
MaeII ACGT 1 cut(s) 156
MaeIII GTNAC 7 cut(s) 112, 251, 422, 437, 737, 1288, 1313
MalI GATC 3 cut(s) 6, 417, 489
MboI GATC 3 cut(s) 4, 415, 487
MboII GAAGA 3 cut(s) 192, 524, 861
MflI RGATCY 1 cut(s) 4
MhlI GDGCHC 3 cut(s) 470, 811, 1089
MlyI GAGTC 4 cut(s) 434, 1258, 1649, 1709
MmeI TCCRAC 4 cut(s) 324, 504, 799, 1054
MroI TCCGGA 1 cut(s) 1210
MseI TTAA 2 cut(s) 956, 1323
MslI CAYNNNNRTG 6 cut(s) 369, 429, 495, 816, 980, 1032
MspA1I CMGCKG 1 cut(s) 1348
MspI CCGG 7 cut(s) 8, 257, 266, 397, 699, 1211, 1649
MspR9I CCNGG 5 cut(s) 9, 56, 257, 397, 1744
MvaI CCWGG 2 cut(s) 56, 1744
MvnI CGCG 1 cut(s) 1199
MwoI GCNNNNNNNGC 5 cut(s) 474, 557, 1414, 1423, 1435
NciI CCSGG 3 cut(s) 9, 257, 397
NcoI CCATGG 1 cut(s) 981
NdeII GATC 3 cut(s) 4, 415, 487
NlaIII CATG 9 cut(s) 342, 456, 500, 522, 712, 783, 985, 1063, 1690
NlaIV GGNNCC 9 cut(s) 6, 12, 298, 450, 478, 588, 636, 833, 862
NmeAIII GCCGAG 1 cut(s) 1663
NmuCI GTSAC 5 cut(s) 251, 422, 437, 737, 1288
NspI RCATGY 2 cut(s) 342, 1690
PciI ACATGT 1 cut(s) 1686
PcsI WCGNNNNNNNCGW 1 cut(s) 132
PfeI GAWTC 8 cut(s) 98, 146, 284, 655, 1159, 1214, 1243, 1655
PkrI GCNGC 9 cut(s) 296, 1350, 1380, 1410, 1425, 1428, 1470, 1485, 1488
PleI GAGTC 4 cut(s) 434, 1257, 1648, 1709
PpsI GAGTC 4 cut(s) 434, 1257, 1648, 1709
PscI ACATGT 1 cut(s) 1686
PshBI ATTAAT 1 cut(s) 956
Psp6I CCWGG 2 cut(s) 54, 1742
PspEI GGTNACC 2 cut(s) 112, 251
PspFI CCCAGC 1 cut(s) 1053
PspGI CCWGG 2 cut(s) 54, 1742
PspN4I GGNNCC 9 cut(s) 6, 12, 298, 450, 478, 588, 636, 833, 862
PspPI GGNCC 4 cut(s) 11, 48, 88, 860
PsuI RGATCY 1 cut(s) 4
RsaI GTAC 5 cut(s) 459, 528, 706, 916, 1196
RsaNI GTAC 5 cut(s) 458, 527, 705, 915, 1195
RseI CAYNNNNRTG 6 cut(s) 369, 429, 495, 816, 980, 1032
SalI GTCGAC 1 cut(s) 104
SaqAI TTAA 2 cut(s) 956, 1323
SatI GCNGC 9 cut(s) 295, 1349, 1379, 1409, 1424, 1427, 1469, 1484, 1487
Sau3AI GATC 3 cut(s) 4, 415, 487
Sau96I GGNCC 4 cut(s) 11, 48, 88, 860
ScaI AGTACT 1 cut(s) 528
SchI GAGTC 4 cut(s) 434, 1258, 1649, 1709
ScrFI CCNGG 5 cut(s) 9, 56, 257, 397, 1744
SduI GDGCHC 3 cut(s) 470, 811, 1089
SfaNI GCATC 2 cut(s) 1048, 1682
SfcI CTRYAG 1 cut(s) 675
SinI GGWCC 3 cut(s) 11, 48, 88
SmiMI CAYNNNNRTG 6 cut(s) 369, 429, 495, 816, 980, 1032
SsiI CCGC 8 cut(s) 218, 294, 682, 999, 1348, 1415, 1427, 1487
SspI AATATT 2 cut(s) 622, 847
SspMI CTAG 6 cut(s) 666, 714, 1032, 1260, 1277, 1644
StyD4I CCNGG 5 cut(s) 7, 54, 255, 395, 1742
StyI CCWWGG 1 cut(s) 981
TaaI ACNGT 7 cut(s) 214, 251, 413, 428, 679, 938, 1084
TaiI ACGT 1 cut(s) 159
TaqI TCGA 1 cut(s) 105
TaqII GACCGA 1 cut(s) 65
TatI WGTACW 3 cut(s) 457, 526, 914
TauI GCSGC 4 cut(s) 297, 1351, 1429, 1489
TfiI GAWTC 8 cut(s) 98, 146, 284, 655, 1159, 1214, 1243, 1655
Tru1I TTAA 2 cut(s) 956, 1323
Tru9I TTAA 2 cut(s) 956, 1323
TscAI CASTG 4 cut(s) 416, 431, 467, 1089
TseFI GTSAC 5 cut(s) 251, 422, 437, 737, 1288
TseI GCWGC 5 cut(s) 1378, 1408, 1423, 1468, 1483
Tsp45I GTSAC 5 cut(s) 251, 422, 437, 737, 1288
TspDTI ATGAA 1 cut(s) 1016
TspGWI ACGGA 3 cut(s) 223, 518, 1322
TspRI CASTG 4 cut(s) 416, 431, 467, 1089
VneI GTGCAC 1 cut(s) 807
VpaK11BI GGWCC 3 cut(s) 11, 48, 88
VspI ATTAAT 1 cut(s) 956
XagI CCTNNNNNAGG 1 cut(s) 59
XapI RAATTY 6 cut(s) 377, 723, 1255, 1527, 1591, 1613
XceI RCATGY 2 cut(s) 342, 1690
XcmI CCANNNNNNNNNTGG 2 cut(s) 211, 459
XmiI GTMKAC 1 cut(s) 105
XspI CTAG 6 cut(s) 666, 714, 1032, 1260, 1277, 1644
ZrmI AGTACT 1 cut(s) 528
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.