Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0008119

Physical Location & Seq

Genomic Coordinates Reverse (-)

48251146 .. 48254090

Gene Structure 2945 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G025050.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1695 bp

ATGAATTCGGGCCCCATAGAGATAAGCTCCGACGAGGATACGGGTCTCAACGACCTCGATGACGACAGCGCCGACTGGCTCTCCAATCTCATCGAGTCCGTCGAGAACAAGTTCGGCGACGACGATTCCGATGACGTGGTGGTGATCGGCGAGGTCAACAGCGGGCCAAAGGGTTCCGTGAAGGAGGTGGATGACGATTGTGTGGTCTTGGACGGTGACCCGGACAAGGCGGTTTCGGTTGCGGACGACGAGTCGGGTAGCGGGTCGGACGATTTGGTTGTGGTGGGCGAGAAGGGCCAGATAGCGTGCAGAGACTACCCTCATCCACGACATCTTTGTGCCAAATTCCCTTTCACTTCTACGCCACATGAGAAGCACTGTGACCTGTGTCACTGTTATGTCTGTGACTCTTTGGCACCCTGTGTACATTGGGGCATTGGCGCTTCGCATATTGGCCATTGTCATGCTACGGAGAAAGTAGAGATGTGGAAAGTACTGAGGAGAAATTTCAAGTTGGGGAGAAGTGCTTCCATGCCAGTTATAAAAGTATCTTTGGCTCTGCCTCAACTTAATCAAGTTCCACCTCTTGATATTATTAGATTGGCACCCAACTCTATTCCACAGACTCAGGTCTGTAGGCCAACTACGACCCATGCTGTCTCCTCCACCAGCCCTACTTTGCCAGCACCTACCTCTATACCACTGAATCAGGTCCCGAGGTCAACTTTGATCCGTGCTCCCCCCTCAACCACCCTTATCAATTCTACTGTCAGGAATCAAGGGAGAAGCCACCAACCAAGATTTCTTTCATCCAAGAATGGAGTCCAACCAGCTTCTGTCCAACCATCTTCAGCTTCTCAGCAGTTGCATAGTAATGCTGTAAGGAGTAGCAGAGCTCAGAATATTGGTAATGGAGGCCTTCACTCTACCTCTTCACCGACAATGTTTAAAAGAGCAGGGCCTGTTCGGATTTCTTTGGGAAGGAGCCGTTCTGCATATGGTTCATCATATAACAGCAATCATGTTAATCCATCACAGTGTGGTTCGTTAAATAACAGCGGCTGTGCCAATCCATCACAAAATGGCAGAATTCCCGCCCCCATGGCAGCATCACATGACGGAATTCGCTTCAGTTGGCAGGGGGTTCATAACAGCTTGAATCGGATCCCCTCCGTGCCCATGGGCAGTGGCATTGTTGGAAGTGCATTGCCTCCCCAGCAGCCCCAAACATACAGTCAACCTTTTGCTGATCAAATTCAAAATGATGCCCAAAATATCTATCAATATGGGATTGAAAGTCAAAATGCAAGCCAGAACGTCTCTCTGCAAGGCATAGGTCCAAGTGCTGTGGACTTGGGGTTTTCAGATTGCAACTACAGTTGGATGAACAACACCAGTCAAAGCATTCAGCAACCTCAACCTCCCATTGGAAATTCTCAAGTTCAAAGCACCGAGGCTATATATGGGCCATCTCCAGTCAAGGAACCTGATTTCCAGTCCAACGGATACCCTAATTTCCAGGGGTTGGAAAGTGATTTCGAGAACTGGCTACTGGACAATCAGCCAACTCCACCACTAACAAATGATTATGTGCCTTCTCAACTGGATCTCTTGTCTCCAGGGCCTGCTCTTGCTGACGCGGGGATGCTTCTGTTTGATTTTGAAACCTCTCTCAACAGTCTCACACAGGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CSD

Protein Analysis

564

Amino Acids

60.49

Weight (kDa)

5.12

Isoelectric Point (pI)

50.08

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008119)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g20270 FvH4_2g20270 FvH4_2g20270 FvH4_2g20270
malus_domestica	MD05G1186600.v1.1 MD10G1174400.v1.1 MD10G1174600.v1.1
prunus_persica	Prupe.8G213400_v2.0.a1
pyrus_communis	pycom05g17080 pycom10g15040
rosa_chinensis	RchiOBHm_Chr6g0286061
rosa_laevigata	RLG00000012585
rosa_multiflora	Rmu_co8125756.1_g000001 Rmu_co8336629.1_g000001
rosa_roxburghii	Rroxscaffold_7G00182490
rosa_rugosa	Rorug06G0178700
rosa_samantha	Rh6AG290800 Rh6AG290900 Rh6BG294200 Rh6CG293700 Rh6CG293800 Rh6DG285800 Rh6DG285900
rosa_wichuraiana	Rw6G025050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	542
AccB1I	GGYRCC	2 cut(s)	415, 604
AccB7I	CCANNNNNTGG	1 cut(s)	1525
AccII	CGCG	1 cut(s)	1640
AciI	CCGC	7 cut(s)	162, 230, 242, 261, 1059, 1095, 1640
AclWI	GGATC	4 cut(s)	724, 1159, 1172, 1614
AcoI	YGGCCR	1 cut(s)	454
AcsI	RAATTY	7 cut(s)	4, 344, 505, 1089, 1122, 1254, 1432
AcuI	CTGAAG	2 cut(s)	834, 1114
AdeI	CACNNNGTG	2 cut(s)	422, 1040
AfaI	GTAC	2 cut(s)	426, 495
AfiI	CCNNNNNNNGG	3 cut(s)	226, 1427, 1525
AgsI	TTSAA	6 cut(s)	511, 1159, 1259, 1295, 1445, 1664
AhdI	GACNNNNNGTC	1 cut(s)	250
AjiI	CACGTC	1 cut(s)	136
AjnI	CCWGG	2 cut(s)	1518, 1618
AjuI	GAANNNNNNNTTGG	6 cut(s)	335, 367, 786, 790, 818, 822
AleI	CACNNNNGTG	1 cut(s)	1688
AloI	GAACNNNNNNTCC	2 cut(s)	1476, 1508
AluBI	AGCT	5 cut(s)	27, 833, 854, 896, 1155
AluI	AGCT	5 cut(s)	27, 833, 854, 896, 1155
Alw21I	GWGCWC	2 cut(s)	739, 898
Alw26I	GTCTC	6 cut(s)	50, 306, 664, 1324, 1620, 1685
AlwI	GGATC	4 cut(s)	724, 1159, 1172, 1614
AlwNI	CAGNNNCTG	4 cut(s)	836, 962, 1062, 1625
Ama87I	CYCGRG	1 cut(s)	715
AoxI	GGCC	9 cut(s)	10, 164, 295, 454, 638, 916, 959, 1466, 1622
ApaI	GGGCCC	1 cut(s)	14
ApeKI	GCWGC	2 cut(s)	1106, 1219
ApoI	RAATTY	7 cut(s)	4, 344, 505, 1089, 1122, 1254, 1432
ArsI	GACNNNNNNTTYG	2 cut(s)	1219, 1251
Asp700I	GAANNNNTTC	2 cut(s)	110, 526
AspLEI	GCGC	2 cut(s)	71, 443
AspS9I	GGNCC	9 cut(s)	10, 11, 164, 295, 712, 959, 1337, 1466, 1622
AsuC2I	CCSGG	1 cut(s)	221
AsuHPI	GGTGA	3 cut(s)	154, 227, 927
AvaI	CYCGRG	1 cut(s)	715
AvaII	GGWCC	2 cut(s)	712, 1337
BaeGI	GKGCMC	2 cut(s)	14, 1179
BalI	TGGCCA	1 cut(s)	456
BamHI	GGATCC	1 cut(s)	1164
BanI	GGYRCC	2 cut(s)	415, 604
BanII	GRGCYC	2 cut(s)	14, 898
Bbv12I	GWGCWC	2 cut(s)	739, 898
BbvI	GCAGC	2 cut(s)	1118, 1231
BccI	CCATC	4 cut(s)	853, 1039, 1081, 1477
BceAI	ACGGC	1 cut(s)	972
BciT130I	CCWGG	2 cut(s)	1520, 1620
BciVI	GTATCC	2 cut(s)	31, 1499
BclI	TGATCA	1 cut(s)	1249
BcnI	CCSGG	1 cut(s)	221
BcoDI	GTCTC	6 cut(s)	50, 306, 664, 1324, 1620, 1685
BfmI	CTRYAG	2 cut(s)	634, 1375
BfoI	RGCGCY	2 cut(s)	72, 444
BfuI	GTATCC	2 cut(s)	31, 1499
BglI	GCCNNNNNGGC	1 cut(s)	1103
BisI	GCNGC	3 cut(s)	1060, 1107, 1220
BlsI	GCNGC	3 cut(s)	1061, 1108, 1221
BmcAI	AGTACT	1 cut(s)	495
Bme1390I	CCNGG	3 cut(s)	221, 1520, 1620
Bme18I	GGWCC	2 cut(s)	712, 1337
BmeRI	GACNNNNNGTC	1 cut(s)	250
BmeT110I	CYCGRG	1 cut(s)	715
BmgBI	CACGTC	1 cut(s)	136
BmgT120I	GGNCC	9 cut(s)	10, 11, 164, 295, 712, 959, 1337, 1466, 1622
BmiI	GGNNCC	9 cut(s)	12, 13, 175, 417, 606, 714, 986, 1166, 1485
BmrFI	CCNGG	3 cut(s)	221, 1520, 1620
BmsI	GCATC	3 cut(s)	1118, 1255, 1635
BoxI	GACNNNNGTC	2 cut(s)	387, 629
BplI	GAGNNNNNCTC	2 cut(s)	11, 43
BpmI	CTGGAG	2 cut(s)	1458, 1602
BpuEI	CTTGAG	1 cut(s)	1422
BpuMI	CCSGG	1 cut(s)	221
BsaI	GGTCTC	1 cut(s)	50
BsaJI	CCNNGG	6 cut(s)	716, 1101, 1179, 1452, 1519, 1619
BsaXI	ACNNNNNCTCC	2 cut(s)	65, 95
Bsc4I	CCNNNNNNNGG	3 cut(s)	226, 1427, 1525
Bse1I	ACTGG	8 cut(s)	80, 536, 1395, 1475, 1495, 1550, 1557, 1608
Bse3DI	GCAATG	1 cut(s)	1205
BseBI	CCWGG	2 cut(s)	1520, 1620
BseDI	CCNNGG	6 cut(s)	716, 1101, 1179, 1452, 1519, 1619
BseGI	GGATG	5 cut(s)	196, 322, 809, 1389, 1650
BseLI	CCNNNNNNNGG	3 cut(s)	226, 1427, 1525
BseMI	GCAATG	1 cut(s)	1205
BseMII	CTCAG	4 cut(s)	488, 641, 872, 911
BseNI	ACTGG	8 cut(s)	80, 536, 1395, 1475, 1495, 1550, 1557, 1608
BseRI	GAGGAG	2 cut(s)	514, 652
BseSI	GKGCMC	2 cut(s)	14, 1179
BseXI	GCAGC	2 cut(s)	1118, 1231
BseYI	CCCAGC	1 cut(s)	1215
BsgI	GTGCAG	1 cut(s)	328
Bsh1236I	CGCG	1 cut(s)	1640
BshFI	GGCC	9 cut(s)	12, 166, 297, 456, 640, 918, 961, 1468, 1624
BshNI	GGYRCC	2 cut(s)	415, 604
BsiHKAI	GWGCWC	2 cut(s)	739, 898
BsiHKCI	CYCGRG	1 cut(s)	715
BsiSI	CCGG	1 cut(s)	221
BslFI	GGGAC	1 cut(s)	698
BslI	CCNNNNNNNGG	3 cut(s)	226, 1427, 1525
BsmAI	GTCTC	6 cut(s)	50, 306, 664, 1324, 1620, 1685
BsmBI	CGTCTC	1 cut(s)	1324
BsmFI	GGGAC	1 cut(s)	698
BsmI	GAATGC	1 cut(s)	1404
BsnI	GGCC	9 cut(s)	12, 166, 297, 456, 640, 918, 961, 1468, 1624
Bso31I	GGTCTC	1 cut(s)	50
BsoBI	CYCGRG	1 cut(s)	715
Bsp120I	GGGCCC	1 cut(s)	10
Bsp1286I	GDGCHC	4 cut(s)	14, 739, 898, 1179
Bsp1407I	TGTACA	1 cut(s)	424
Bsp143I	GATC	5 cut(s)	144, 729, 1164, 1249, 1606
Bsp19I	CCATGG	2 cut(s)	1101, 1179
BspACI	CCGC	7 cut(s)	162, 230, 242, 261, 1059, 1095, 1640
BspANI	GGCC	9 cut(s)	12, 166, 297, 456, 640, 918, 961, 1468, 1624
BspCNI	CTCAG	4 cut(s)	489, 640, 871, 910
BspFNI	CGCG	1 cut(s)	1640
BspLI	GGNNCC	9 cut(s)	12, 13, 175, 417, 606, 714, 986, 1166, 1485
BspPI	GGATC	4 cut(s)	724, 1159, 1172, 1614
BspT107I	GGYRCC	2 cut(s)	415, 604
BspTNI	GGTCTC	1 cut(s)	50
BsrDI	GCAATG	1 cut(s)	1205
BsrGI	TGTACA	1 cut(s)	424
BsrI	ACTGG	8 cut(s)	80, 536, 1395, 1475, 1495, 1550, 1557, 1608
BssECI	CCNNGG	6 cut(s)	716, 1101, 1179, 1452, 1519, 1619
BssMI	GATC	5 cut(s)	144, 729, 1164, 1249, 1606
BssT1I	CCWWGG	2 cut(s)	1101, 1179
Bst2UI	CCWGG	2 cut(s)	1520, 1620
Bst4CI	ACNGT	8 cut(s)	215, 380, 395, 769, 1038, 1235, 1379, 1679
Bst6I	CTCTTC	1 cut(s)	937
BstAUI	TGTACA	1 cut(s)	424
BstC8I	GCNNGC	5 cut(s)	164, 307, 684, 1309, 1626
BstDEI	CTNAG	4 cut(s)	497, 627, 858, 897
BstDSI	CCRYGG	2 cut(s)	1101, 1179
BstEII	GGTNACC	1 cut(s)	215
BstF5I	GGATG	5 cut(s)	196, 322, 809, 1389, 1650
BstFNI	CGCG	1 cut(s)	1640
BstH2I	RGCGCY	2 cut(s)	72, 444
BstHHI	GCGC	2 cut(s)	71, 443
BstKTI	GATC	5 cut(s)	147, 732, 1167, 1252, 1609
BstMAI	GTCTC	6 cut(s)	50, 306, 664, 1324, 1620, 1685
BstMBI	GATC	5 cut(s)	144, 729, 1164, 1249, 1606
BstMWI	GCNNNNNNNGC	3 cut(s)	294, 1103, 1216
BstNI	CCWGG	2 cut(s)	1520, 1620
BstPAI	GACNNNNGTC	2 cut(s)	387, 629
BstPI	GGTNACC	1 cut(s)	215
BstSCI	CCNGG	3 cut(s)	219, 1518, 1618
BstSFI	CTRYAG	2 cut(s)	634, 1375
BstSLI	GKGCMC	2 cut(s)	14, 1179
BstUI	CGCG	1 cut(s)	1640
BstV1I	GCAGC	2 cut(s)	1118, 1231
BstX2I	RGATCY	2 cut(s)	1164, 1606
BstYI	RGATCY	2 cut(s)	1164, 1606
BsuI	GTATCC	2 cut(s)	31, 1499
BsuRI	GGCC	9 cut(s)	12, 166, 297, 456, 640, 918, 961, 1468, 1624
BtgI	CCRYGG	2 cut(s)	1101, 1179
BtrI	CACGTC	1 cut(s)	136
BtsCI	GGATG	5 cut(s)	196, 322, 809, 1389, 1650
BtsI	GCAGTG	1 cut(s)	1192
BtsIMutI	CAGTG	5 cut(s)	376, 391, 701, 1043, 1192
Cac8I	GCNNGC	5 cut(s)	164, 307, 684, 1309, 1626
CaiI	CAGNNNCTG	4 cut(s)	836, 962, 1062, 1625
CfoI	GCGC	2 cut(s)	71, 443
Cfr13I	GGNCC	9 cut(s)	10, 11, 164, 295, 712, 959, 1337, 1466, 1622
CseI	GACGC	1 cut(s)	1646
Csp6I	GTAC	2 cut(s)	425, 494
CspCI	CAANNNNNGTGG	2 cut(s)	1329, 1364
CviAII	CATG	8 cut(s)	368, 464, 532, 653, 1022, 1102, 1115, 1180
CviQI	GTAC	2 cut(s)	425, 494
DdeI	CTNAG	4 cut(s)	497, 627, 858, 897
DpnI	GATC	5 cut(s)	146, 731, 1166, 1251, 1608
DpnII	GATC	5 cut(s)	144, 729, 1164, 1249, 1606
DraI	TTTAAA	1 cut(s)	949
DraIII	CACNNNGTG	2 cut(s)	422, 1040
DriI	GACNNNNNGTC	1 cut(s)	250
EaeI	YGGCCR	1 cut(s)	454
Eam1104I	CTCTTC	1 cut(s)	937
Eam1105I	GACNNNNNGTC	1 cut(s)	250
EarI	CTCTTC	1 cut(s)	937
Ecl136II	GAGCTC	1 cut(s)	896
Eco130I	CCWWGG	2 cut(s)	1101, 1179
Eco147I	AGGCCT	1 cut(s)	918
Eco24I	GRGCYC	2 cut(s)	14, 898
Eco31I	GGTCTC	1 cut(s)	50
Eco47I	GGWCC	2 cut(s)	712, 1337
Eco53kI	GAGCTC	1 cut(s)	896
Eco57I	CTGAAG	2 cut(s)	834, 1114
Eco88I	CYCGRG	1 cut(s)	715
Eco91I	GGTNACC	1 cut(s)	215
EcoICRI	GAGCTC	1 cut(s)	896
EcoO109I	RGGNCCY	4 cut(s)	11, 712, 959, 1622
EcoO65I	GGTNACC	1 cut(s)	215
EcoRI	GAATTC	3 cut(s)	4, 1089, 1122
EcoRII	CCWGG	2 cut(s)	1518, 1618
EcoT14I	CCWWGG	2 cut(s)	1101, 1179
EcoT38I	GRGCYC	2 cut(s)	14, 898
ErhI	CCWWGG	2 cut(s)	1101, 1179
Esp3I	CGTCTC	1 cut(s)	1324
FaeI	CATG	8 cut(s)	371, 467, 535, 656, 1025, 1105, 1118, 1183
FaqI	GGGAC	1 cut(s)	698
FatI	CATG	8 cut(s)	367, 463, 531, 652, 1021, 1101, 1114, 1179
FauI	CCCGC	4 cut(s)	155, 254, 1102, 1633
FauNDI	CATATG	1 cut(s)	997
FbaI	TGATCA	1 cut(s)	1249
Fnu4HI	GCNGC	3 cut(s)	1060, 1107, 1220
FokI	GGATG	5 cut(s)	203, 309, 796, 1396, 1657
FriOI	GRGCYC	2 cut(s)	14, 898
Fsp4HI	GCNGC	3 cut(s)	1060, 1107, 1220
GlaI	GCGC	2 cut(s)	70, 442
GluI	GCNGC	3 cut(s)	1060, 1107, 1220
GsaI	CCCAGC	1 cut(s)	1219
GsuI	CTGGAG	2 cut(s)	1458, 1602
HaeII	RGCGCY	2 cut(s)	72, 444
HaeIII	GGCC	9 cut(s)	12, 166, 297, 456, 640, 918, 961, 1468, 1624
HapII	CCGG	1 cut(s)	221
HgaI	GACGC	1 cut(s)	1646
HhaI	GCGC	2 cut(s)	71, 443
Hin1II	CATG	8 cut(s)	371, 467, 535, 656, 1025, 1105, 1118, 1183
Hin6I	GCGC	2 cut(s)	69, 441
HinP1I	GCGC	2 cut(s)	69, 441
HincII	GTYRAC	3 cut(s)	157, 723, 1238
HindII	GTYRAC	3 cut(s)	157, 723, 1238
HinfI	GANTC	9 cut(s)	95, 125, 251, 407, 625, 706, 775, 822, 1159
HpaII	CCGG	1 cut(s)	221
HphI	GGTGA	3 cut(s)	154, 227, 927
Hpy166II	GTNNAC	5 cut(s)	157, 425, 723, 1238, 1351
Hpy188I	TCNGA	7 cut(s)	31, 130, 268, 900, 969, 1164, 1366
Hpy188III	TCNNGA	5 cut(s)	103, 587, 715, 772, 1540
Hpy8I	GTNNAC	5 cut(s)	157, 425, 723, 1238, 1351
Hpy99I	CGWCG	5 cut(s)	35, 104, 122, 125, 251
HpyAV	CCTTC	5 cut(s)	175, 286, 929, 975, 1605
HpyCH4III	ACNGT	8 cut(s)	215, 380, 395, 769, 1038, 1235, 1379, 1679
HpyCH4IV	ACGT	2 cut(s)	135, 1317
HpyCH4V	TGCA	7 cut(s)	309, 868, 995, 1205, 1307, 1327, 1371
HpyF10VI	GCNNNNNNNGC	3 cut(s)	294, 1103, 1216
HpyF3I	CTNAG	4 cut(s)	497, 627, 858, 897
HpySE526I	ACGT	2 cut(s)	135, 1317
Hsp92II	CATG	8 cut(s)	371, 467, 535, 656, 1025, 1105, 1118, 1183
HspAI	GCGC	2 cut(s)	69, 441
Ksp22I	TGATCA	1 cut(s)	1249
Kzo9I	GATC	5 cut(s)	144, 729, 1164, 1249, 1606
LmnI	GCTCC	3 cut(s)	32, 742, 984
Lsp1109I	GCAGC	2 cut(s)	1118, 1231
LweI	GCATC	3 cut(s)	1118, 1255, 1635
MaeII	ACGT	2 cut(s)	135, 1317
MaeIII	GTNAC	4 cut(s)	215, 380, 389, 404
MalI	GATC	5 cut(s)	146, 731, 1166, 1251, 1608
MboI	GATC	5 cut(s)	144, 729, 1164, 1249, 1606
MboII	GAAGA	2 cut(s)	840, 924
MflI	RGATCY	2 cut(s)	1164, 1606
MhlI	GDGCHC	4 cut(s)	14, 739, 898, 1179
MlsI	TGGCCA	1 cut(s)	456
MluCI	AATT	9 cut(s)	4, 344, 505, 760, 1089, 1122, 1254, 1432, 1513
MluNI	TGGCCA	1 cut(s)	456
MlyI	GAGTC	5 cut(s)	104, 260, 401, 619, 831
MmeI	TCCRAC	8 cut(s)	54, 246, 850, 865, 1177, 1361, 1506, 1524
Mox20I	TGGCCA	1 cut(s)	456
MroXI	GAANNNNTTC	2 cut(s)	110, 526
MscI	TGGCCA	1 cut(s)	456
MseI	TTAA	4 cut(s)	570, 948, 1026, 1049
MslI	CAYNNNNRTG	6 cut(s)	336, 396, 462, 873, 1036, 1688
Msp20I	TGGCCA	1 cut(s)	456
MspA1I	CMGCKG	2 cut(s)	162, 1059
MspI	CCGG	1 cut(s)	221
MspR9I	CCNGG	3 cut(s)	221, 1520, 1620
Mva1269I	GAATGC	1 cut(s)	1404
MvaI	CCWGG	2 cut(s)	1520, 1620
MvnI	CGCG	1 cut(s)	1640
MwoI	GCNNNNNNNGC	3 cut(s)	294, 1103, 1216
NciI	CCSGG	1 cut(s)	221
NcoI	CCATGG	2 cut(s)	1101, 1179
NdeI	CATATG	1 cut(s)	997
NdeII	GATC	5 cut(s)	144, 729, 1164, 1249, 1606
NlaIII	CATG	8 cut(s)	371, 467, 535, 656, 1025, 1105, 1118, 1183
NlaIV	GGNNCC	9 cut(s)	12, 13, 175, 417, 606, 714, 986, 1166, 1485
NmuCI	GTSAC	4 cut(s)	215, 380, 389, 404
OliI	CACNNNNGTG	1 cut(s)	1688
PceI	AGGCCT	1 cut(s)	918
PcsI	WCGNNNNNNNCGW	4 cut(s)	69, 99, 120, 126
PctI	GAATGC	1 cut(s)	1404
PdmI	GAANNNNTTC	2 cut(s)	110, 526
PfeI	GAWTC	4 cut(s)	125, 706, 775, 1159
PflMI	CCANNNNNTGG	1 cut(s)	1525
PkrI	GCNGC	3 cut(s)	1061, 1108, 1221
PleI	GAGTC	5 cut(s)	103, 259, 401, 619, 830
PpsI	GAGTC	5 cut(s)	103, 259, 401, 619, 830
PpuMI	RGGWCCY	1 cut(s)	712
PshAI	GACNNNNGTC	2 cut(s)	387, 629
PsiI	TTATAA	1 cut(s)	542
Psp124BI	GAGCTC	1 cut(s)	898
Psp5II	RGGWCCY	1 cut(s)	712
Psp6I	CCWGG	2 cut(s)	1518, 1618
PspEI	GGTNACC	1 cut(s)	215
PspFI	CCCAGC	1 cut(s)	1215
PspGI	CCWGG	2 cut(s)	1518, 1618
PspN4I	GGNNCC	9 cut(s)	12, 13, 175, 417, 606, 714, 986, 1166, 1485
PspOMI	GGGCCC	1 cut(s)	10
PspPI	GGNCC	9 cut(s)	10, 11, 164, 295, 712, 959, 1337, 1466, 1622
PspPPI	RGGWCCY	1 cut(s)	712
PstNI	CAGNNNCTG	4 cut(s)	836, 962, 1062, 1625
PsuI	RGATCY	2 cut(s)	1164, 1606
RsaI	GTAC	2 cut(s)	426, 495
RsaNI	GTAC	2 cut(s)	425, 494
RseI	CAYNNNNRTG	6 cut(s)	336, 396, 462, 873, 1036, 1688
SacI	GAGCTC	1 cut(s)	898
SaqAI	TTAA	4 cut(s)	570, 948, 1026, 1049
SatI	GCNGC	3 cut(s)	1060, 1107, 1220
Sau3AI	GATC	5 cut(s)	144, 729, 1164, 1249, 1606
Sau96I	GGNCC	9 cut(s)	10, 11, 164, 295, 712, 959, 1337, 1466, 1622
ScaI	AGTACT	1 cut(s)	495
SchI	GAGTC	5 cut(s)	104, 260, 401, 619, 831
ScrFI	CCNGG	3 cut(s)	221, 1520, 1620
SduI	GDGCHC	4 cut(s)	14, 739, 898, 1179
SfaNI	GCATC	3 cut(s)	1118, 1255, 1635
SfcI	CTRYAG	2 cut(s)	634, 1375
SinI	GGWCC	2 cut(s)	712, 1337
SmiMI	CAYNNNNRTG	6 cut(s)	336, 396, 462, 873, 1036, 1688
SmlI	CTYRAG	1 cut(s)	1437
SmoI	CTYRAG	1 cut(s)	1437
Sse9I	AATT	9 cut(s)	4, 344, 505, 760, 1089, 1122, 1254, 1432, 1513
SseBI	AGGCCT	1 cut(s)	918
SsiI	CCGC	7 cut(s)	162, 230, 242, 261, 1059, 1095, 1640
SspI	AATATT	1 cut(s)	904
SstI	GAGCTC	1 cut(s)	898
StuI	AGGCCT	1 cut(s)	918
StyD4I	CCNGG	3 cut(s)	219, 1518, 1618
StyI	CCWWGG	2 cut(s)	1101, 1179
TaaI	ACNGT	8 cut(s)	215, 380, 395, 769, 1038, 1235, 1379, 1679
TaiI	ACGT	2 cut(s)	138, 1320
TaqI	TCGA	4 cut(s)	57, 93, 102, 1539
TasI	AATT	9 cut(s)	4, 344, 505, 760, 1089, 1122, 1254, 1432, 1513
TatI	WGTACW	2 cut(s)	424, 493
TauI	GCSGC	1 cut(s)	1062
TfiI	GAWTC	4 cut(s)	125, 706, 775, 1159
Tru1I	TTAA	4 cut(s)	570, 948, 1026, 1049
Tru9I	TTAA	4 cut(s)	570, 948, 1026, 1049
TscAI	CASTG	5 cut(s)	383, 398, 708, 1043, 1192
TseFI	GTSAC	4 cut(s)	215, 380, 389, 404
TseI	GCWGC	2 cut(s)	1106, 1219
Tsp45I	GTSAC	4 cut(s)	215, 380, 389, 404
TspDTI	ATGAA	5 cut(s)	17, 798, 993, 1136, 1400
TspGWI	ACGGA	7 cut(s)	88, 166, 485, 722, 1134, 1162, 1518
TspRI	CASTG	5 cut(s)	383, 398, 708, 1043, 1192
Van91I	CCANNNNNTGG	1 cut(s)	1525
VpaK11BI	GGWCC	2 cut(s)	712, 1337
XapI	RAATTY	7 cut(s)	4, 344, 505, 1089, 1122, 1254, 1432
XmnI	GAANNNNTTC	2 cut(s)	110, 526
ZrmI	AGTACT	1 cut(s)	495

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.