MD05G1240400.v1.1

Methyladenine glycosylase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
37110789 .. 37113628
2840 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1240400.v1.1.491

Sequence Viewer

Length: 1260 bp
ATGTGCAGCTCAAAGGCCAAGGTGACCTTAGGGATTGAAGTCACACCCATTGTGGCTAGAATCAATGGCAGGCCAGTCCTTCAGCCTAATTGCAACCGGGTTCCTAGCCTAGACCGGCGTGGTTCGATTAAGAGAATATCGACGCCACCACCACCTCCACTACCATTGCCAGCTTCTTCTGCTAGTACAAGTCCTAGAACTACCAACAAGGCCTCACCATTGTTAACACCTCCCATTTCTCCAAAATCGAAGTCTCCACGGCCACCAGCAATCAAGAGAGGAAATGACCCTAATGCGTTGAATTCGAGTTCGGAAAAAGTTGTGACACCAGGAGGTACCACAAGAGCTAAGACATTGGAGAGGAAGAAGTCCAAGAGTTTTAAGCGGGCTAGCGTTGGTGTTGATGTTGGTGCTGATCATGGCCGCTTTAGTAATGGTGGATTTTCTCCTTCAAATATCGAGGCGTCGTTGAGTTATTCGTCTTCTTTGATCATTGAGGCACCTGGCAGCATTGCTGCTGGGAGGAGGGAGCAGATGGCGCTTCAACATGCACAGAGAAAGATGAGAATTGCGCATTACGGTAGGTCAAAGTCTGCCAACTTTGAGAGGGTTGTCCCTGTTGATGCTTCTAGTAATGTAGAAGCCAAGGCAGCTGAAGAAGAGAAAAGGTGCAGCTTTATCACGGCTAACTCAGATCCCATCTATGTTGCTTACCATGATGAAGAATGGGGAGTTCCTGTCCATGATGACAAGATGTTGTTTGAACTCCTTGTGTTAAGTGGAGCTCAAGTTGGCTCAGATTGGACTTCCATTTTAAAGAAACGTCAAGATTTCAGGAATGCATTTTCAGGATTTGATGCAGAAACTGTGGCAAATTTAAGTGAGAAACAGATGATGTCAATTGCTTCTGAATATGGCATTGAAATCAGCAGGATCCGAGGAGTTGTAGACAACTCTAACAGGATTCTTGAGATTAAGAAGGAATTTGGATCATTTGACAAGTACATCTGGGGATTTGTCAATCAAAAGCCCATCTCACCACAGTATAAATTAGGCTACAAAATCCCAGTGAAAACTTCAAAATCAGAGTCGATTAGCAAAGACATGGTTCGGAGGGGATTTAGGTTTGTGGGTCCAACAGTCGTTCATTCATTCATGCAAGCCTCAGGCCTCACGAACGACCATCTGATCACTTGCCACAGGCACCTCCAATGCACCTTATTGGCAGCCCGCCGCCCGGCATTGGAAGAATTTCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

420

Amino Acids

45.97

Weight (kDa)

9.88

Isoelectric Point (pI)

53.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Adenine_glyco PF03352 229 - 402 1.4e-65 Methyladenine glycosylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012861)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 573
Acc65I GGTACC 1 cut(s) 335
AccB1I GGYRCC 3 cut(s) 335, 499, 1203
AccI GTMKAC 1 cut(s) 948
AciI CCGC 4 cut(s) 385, 424, 1231, 1234
AclWI GGATC 4 cut(s) 689, 928, 941, 997
AcoI YGGCCR 2 cut(s) 260, 421
AcsI RAATTY 4 cut(s) 301, 874, 983, 1250
AcuI CTGAAG 2 cut(s) 65, 675
AcyI GRCGYC 2 cut(s) 143, 464
AfaI GTAC 3 cut(s) 187, 337, 1004
AfiI CCNNNNNNNGG 2 cut(s) 1237, 1243
AgsI TTSAA 7 cut(s) 38, 301, 453, 545, 764, 923, 1080
AjnI CCWGG 2 cut(s) 328, 502
AluBI AGCT 6 cut(s) 9, 173, 347, 653, 675, 785
AluI AGCT 6 cut(s) 9, 173, 347, 653, 675, 785
Alw21I GWGCWC 1 cut(s) 787
Alw26I GTCTC 1 cut(s) 258
AlwI GGATC 4 cut(s) 689, 928, 941, 997
AlwNI CAGNNNCTG 1 cut(s) 866
AoxI GGCC 6 cut(s) 15, 71, 210, 260, 421, 1168
ApeKI GCWGC 6 cut(s) 6, 507, 515, 650, 672, 1226
ApoI RAATTY 4 cut(s) 301, 874, 983, 1250
ArsI GACNNNNNNTTYG 4 cut(s) 236, 268, 1073, 1105
Asp700I GAANNNNTTC 1 cut(s) 1251
Asp718I GGTACC 1 cut(s) 335
AspLEI GCGC 2 cut(s) 541, 574
AspS9I GGNCC 1 cut(s) 1133
AsuC2I CCSGG 2 cut(s) 98, 1238
AsuHPI GGTGA 3 cut(s) 34, 207, 1029
AsuNHI GCTAGC 1 cut(s) 389
AvaII GGWCC 1 cut(s) 1133
AxyI CCTNAGG 2 cut(s) 28, 1165
BamHI GGATCC 1 cut(s) 933
BanI GGYRCC 3 cut(s) 335, 499, 1203
BanII GRGCYC 1 cut(s) 787
BbsI GAAGAC 1 cut(s) 474
Bbv12I GWGCWC 1 cut(s) 787
BbvI GCAGC 6 cut(s) 18, 502, 519, 662, 684, 1238
BccI CCATC 4 cut(s) 529, 707, 1040, 1191
BceAI ACGGC 2 cut(s) 275, 699
BciT130I CCWGG 2 cut(s) 330, 504
BclI TGATCA 3 cut(s) 415, 489, 1188
BcnI CCSGG 2 cut(s) 98, 1238
BcoDI GTCTC 1 cut(s) 258
BfaI CTAG 7 cut(s) 57, 105, 110, 183, 195, 390, 630
BfmI CTRYAG 1 cut(s) 1256
BfoI RGCGCY 1 cut(s) 542
BisI GCNGC 8 cut(s) 7, 424, 508, 516, 651, 673, 1227, 1234
BlsI GCNGC 8 cut(s) 8, 425, 509, 517, 652, 674, 1228, 1235
Bme1390I CCNGG 4 cut(s) 98, 330, 504, 1238
Bme18I GGWCC 1 cut(s) 1133
BmgT120I GGNCC 1 cut(s) 1133
BmiI GGNNCC 6 cut(s) 102, 337, 501, 935, 1134, 1205
BmrFI CCNGG 4 cut(s) 98, 330, 504, 1238
BmrI ACTGGG 1 cut(s) 1061
BmsI GCATC 2 cut(s) 613, 847
BmtI GCTAGC 1 cut(s) 393
BmuI ACTGGG 1 cut(s) 1061
BpiI GAAGAC 1 cut(s) 474
BpuEI CTTGAG 2 cut(s) 771, 989
BpuMI CCSGG 2 cut(s) 98, 1238
BsaHI GRCGYC 2 cut(s) 143, 464
BsaJI CCNNGG 4 cut(s) 18, 257, 645, 937
BsaXI ACNNNNNCTCC 4 cut(s) 723, 753, 774, 804
Bsc4I CCNNNNNNNGG 2 cut(s) 1237, 1243
Bse118I RCCGGY 1 cut(s) 114
Bse1I ACTGG 2 cut(s) 74, 1067
Bse21I CCTNAGG 2 cut(s) 28, 1165
Bse3DI GCAATG 2 cut(s) 164, 510
BseBI CCWGG 2 cut(s) 330, 504
BseDI CCNNGG 4 cut(s) 18, 257, 645, 937
BseLI CCNNNNNNNGG 2 cut(s) 1237, 1243
BseMI GCAATG 2 cut(s) 164, 510
BseMII CTCAG 3 cut(s) 705, 810, 1179
BseNI ACTGG 2 cut(s) 74, 1067
BseRI GAGGAG 2 cut(s) 538, 954
BseXI GCAGC 6 cut(s) 18, 502, 519, 662, 684, 1238
BseYI CCCAGC 1 cut(s) 518
BsgI GTGCAG 2 cut(s) 25, 691
BshFI GGCC 6 cut(s) 17, 73, 212, 262, 423, 1170
BshNI GGYRCC 3 cut(s) 335, 499, 1203
BsiHKAI GWGCWC 1 cut(s) 787
BsiSI CCGG 3 cut(s) 97, 115, 1238
BslFI GGGAC 1 cut(s) 599
BslI CCNNNNNNNGG 2 cut(s) 1237, 1243
BsmAI GTCTC 1 cut(s) 258
BsmFI GGGAC 1 cut(s) 599
BsmI GAATGC 1 cut(s) 844
BsnI GGCC 6 cut(s) 17, 73, 212, 262, 423, 1170
Bsp1286I GDGCHC 1 cut(s) 787
Bsp143I GATC 6 cut(s) 415, 489, 694, 933, 989, 1188
BspACI CCGC 4 cut(s) 385, 424, 1231, 1234
BspANI GGCC 6 cut(s) 17, 73, 212, 262, 423, 1170
BspCNI CTCAG 3 cut(s) 704, 809, 1178
BspLI GGNNCC 6 cut(s) 102, 337, 501, 935, 1134, 1205
BspOI GCTAGC 1 cut(s) 393
BspPI GGATC 4 cut(s) 689, 928, 941, 997
BspT107I GGYRCC 3 cut(s) 335, 499, 1203
BsrDI GCAATG 2 cut(s) 164, 510
BsrFI RCCGGY 1 cut(s) 114
BsrI ACTGG 2 cut(s) 74, 1067
BssAI RCCGGY 1 cut(s) 114
BssECI CCNNGG 4 cut(s) 18, 257, 645, 937
BssMI GATC 6 cut(s) 415, 489, 694, 933, 989, 1188
BssNI GRCGYC 2 cut(s) 143, 464
BssT1I CCWWGG 2 cut(s) 18, 645
Bst2UI CCWGG 2 cut(s) 330, 504
Bst4CI ACNGT 4 cut(s) 581, 868, 1044, 1141
Bst6I CTCTTC 1 cut(s) 654
BstACI GRCGYC 2 cut(s) 143, 464
BstC8I GCNNGC 6 cut(s) 71, 171, 387, 391, 1161, 1231
BstDEI CTNAG 5 cut(s) 28, 348, 691, 796, 1165
BstDSI CCRYGG 1 cut(s) 257
BstEII GGTNACC 1 cut(s) 22
BstH2I RGCGCY 1 cut(s) 542
BstHHI GCGC 2 cut(s) 541, 574
BstKTI GATC 6 cut(s) 418, 492, 697, 936, 992, 1191
BstMAI GTCTC 1 cut(s) 258
BstMBI GATC 6 cut(s) 415, 489, 694, 933, 989, 1188
BstMWI GCNNNNNNNGC 3 cut(s) 179, 538, 650
BstNI CCWGG 2 cut(s) 330, 504
BstNSI RCATGY 1 cut(s) 551
BstPI GGTNACC 1 cut(s) 22
BstSCI CCNGG 4 cut(s) 96, 328, 502, 1236
BstSFI CTRYAG 1 cut(s) 1256
BstV1I GCAGC 6 cut(s) 18, 502, 519, 662, 684, 1238
BstV2I GAAGAC 1 cut(s) 474
BstX2I RGATCY 2 cut(s) 694, 933
BstYI RGATCY 2 cut(s) 694, 933
Bsu36I CCTNAGG 2 cut(s) 28, 1165
BsuRI GGCC 6 cut(s) 17, 73, 212, 262, 423, 1170
BtgI CCRYGG 1 cut(s) 257
BtsIMutI CAGTG 1 cut(s) 1074
Cac8I GCNNGC 6 cut(s) 71, 171, 387, 391, 1161, 1231
CaiI CAGNNNCTG 1 cut(s) 866
CfoI GCGC 2 cut(s) 541, 574
Cfr10I RCCGGY 1 cut(s) 114
Cfr13I GGNCC 1 cut(s) 1133
CseI GACGC 2 cut(s) 151, 453
Csp6I GTAC 3 cut(s) 186, 336, 1003
CspCI CAANNNNNGTGG 2 cut(s) 147, 182
CviAII CATG 6 cut(s) 419, 548, 716, 743, 1105, 1156
CviQI GTAC 3 cut(s) 186, 336, 1003
DdeI CTNAG 5 cut(s) 28, 348, 691, 796, 1165
DpnI GATC 6 cut(s) 417, 491, 696, 935, 991, 1190
DpnII GATC 6 cut(s) 415, 489, 694, 933, 989, 1188
DraI TTTAAA 1 cut(s) 816
EaeI YGGCCR 2 cut(s) 260, 421
Eam1104I CTCTTC 1 cut(s) 654
EarI CTCTTC 1 cut(s) 654
Ecl136II GAGCTC 1 cut(s) 785
Eco130I CCWWGG 2 cut(s) 18, 645
Eco147I AGGCCT 2 cut(s) 212, 1170
Eco24I GRGCYC 1 cut(s) 787
Eco47I GGWCC 1 cut(s) 1133
Eco53kI GAGCTC 1 cut(s) 785
Eco57I CTGAAG 2 cut(s) 65, 675
Eco81I CCTNAGG 2 cut(s) 28, 1165
Eco91I GGTNACC 1 cut(s) 22
EcoICRI GAGCTC 1 cut(s) 785
EcoO65I GGTNACC 1 cut(s) 22
EcoRI GAATTC 1 cut(s) 301
EcoRII CCWGG 2 cut(s) 328, 502
EcoT14I CCWWGG 2 cut(s) 18, 645
EcoT22I ATGCAT 1 cut(s) 844
EcoT38I GRGCYC 1 cut(s) 787
ErhI CCWWGG 2 cut(s) 18, 645
FaeI CATG 6 cut(s) 422, 551, 719, 746, 1108, 1159
FaiI YATR 9 cut(s) 420, 549, 705, 717, 744, 915, 1047, 1106, 1157
FalI AAGNNNNNCTT 2 cut(s) 11, 43
FaqI GGGAC 1 cut(s) 599
FatI CATG 6 cut(s) 418, 547, 715, 742, 1104, 1155
FauI CCCGC 2 cut(s) 378, 1238
FbaI TGATCA 3 cut(s) 415, 489, 1188
FblI GTMKAC 1 cut(s) 948
Fnu4HI GCNGC 8 cut(s) 7, 424, 508, 516, 651, 673, 1227, 1234
FriOI GRGCYC 1 cut(s) 787
Fsp4HI GCNGC 8 cut(s) 7, 424, 508, 516, 651, 673, 1227, 1234
FspBI CTAG 7 cut(s) 57, 105, 110, 183, 195, 390, 630
FspI TGCGCA 1 cut(s) 573
GlaI GCGC 2 cut(s) 540, 573
GluI GCNGC 8 cut(s) 7, 424, 508, 516, 651, 673, 1227, 1234
GsaI CCCAGC 1 cut(s) 522
HaeII RGCGCY 1 cut(s) 542
HaeIII GGCC 6 cut(s) 17, 73, 212, 262, 423, 1170
HapII CCGG 3 cut(s) 97, 115, 1238
HgaI GACGC 2 cut(s) 151, 453
HhaI GCGC 2 cut(s) 541, 574
Hin1I GRCGYC 2 cut(s) 143, 464
Hin1II CATG 6 cut(s) 422, 551, 719, 746, 1108, 1159
Hin6I GCGC 2 cut(s) 539, 572
HinP1I GCGC 2 cut(s) 539, 572
HincII GTYRAC 1 cut(s) 225
HindII GTYRAC 1 cut(s) 225
HinfI GANTC 3 cut(s) 60, 964, 1088
HpaI GTTAAC 1 cut(s) 225
HpaII CCGG 3 cut(s) 97, 115, 1238
HphI GGTGA 3 cut(s) 34, 207, 1029
Hpy166II GTNNAC 2 cut(s) 225, 949
Hpy188I TCNGA 8 cut(s) 313, 694, 799, 910, 938, 1087, 1113, 1188
Hpy188III TCNNGA 6 cut(s) 274, 827, 835, 849, 968, 1174
Hpy8I GTNNAC 2 cut(s) 225, 949
Hpy99I CGWCG 2 cut(s) 145, 469
HpyAV CCTTC 3 cut(s) 89, 459, 973
HpyCH4III ACNGT 4 cut(s) 581, 868, 1044, 1141
HpyCH4IV ACGT 1 cut(s) 823
HpyCH4V TGCA 8 cut(s) 6, 93, 551, 672, 842, 860, 1159, 1215
HpyF10VI GCNNNNNNNGC 3 cut(s) 179, 538, 650
HpyF3I CTNAG 5 cut(s) 28, 348, 691, 796, 1165
HpySE526I ACGT 1 cut(s) 823
Hsp92I GRCGYC 2 cut(s) 143, 464
Hsp92II CATG 6 cut(s) 422, 551, 719, 746, 1108, 1159
HspAI GCGC 2 cut(s) 539, 572
KpnI GGTACC 1 cut(s) 339
Ksp22I TGATCA 3 cut(s) 415, 489, 1188
KspAI GTTAAC 1 cut(s) 225
Kzo9I GATC 6 cut(s) 415, 489, 694, 933, 989, 1188
LmnI GCTCC 2 cut(s) 529, 782
Lsp1109I GCAGC 6 cut(s) 18, 502, 519, 662, 684, 1238
LweI GCATC 2 cut(s) 613, 847
MaeI CTAG 7 cut(s) 57, 105, 110, 183, 195, 390, 630
MaeII ACGT 1 cut(s) 823
MaeIII GTNAC 3 cut(s) 22, 40, 322
MalI GATC 6 cut(s) 417, 491, 696, 935, 991, 1190
MboI GATC 6 cut(s) 415, 489, 694, 933, 989, 1188
MboII GAAGA 7 cut(s) 168, 376, 474, 668, 671, 734, 1259
MfeI CAATTG 1 cut(s) 900
MflI RGATCY 2 cut(s) 694, 933
MhlI GDGCHC 1 cut(s) 787
MluCI AATT 8 cut(s) 88, 301, 567, 874, 900, 983, 1049, 1250
MlyI GAGTC 1 cut(s) 1097
MmeI TCCRAC 1 cut(s) 1160
Mph1103I ATGCAT 1 cut(s) 844
MroXI GAANNNNTTC 1 cut(s) 1251
MseI TTAA 7 cut(s) 129, 224, 381, 776, 815, 878, 975
MspA1I CMGCKG 1 cut(s) 653
MspI CCGG 3 cut(s) 97, 115, 1238
MspR9I CCNGG 4 cut(s) 98, 330, 504, 1238
MunI CAATTG 1 cut(s) 900
Mva1269I GAATGC 1 cut(s) 844
MvaI CCWGG 2 cut(s) 330, 504
MwoI GCNNNNNNNGC 3 cut(s) 179, 538, 650
NciI CCSGG 2 cut(s) 98, 1238
NdeII GATC 6 cut(s) 415, 489, 694, 933, 989, 1188
NheI GCTAGC 1 cut(s) 389
NlaIII CATG 6 cut(s) 422, 551, 719, 746, 1108, 1159
NlaIV GGNNCC 6 cut(s) 102, 337, 501, 935, 1134, 1205
NmuCI GTSAC 3 cut(s) 22, 40, 322
NsbI TGCGCA 1 cut(s) 573
NsiI ATGCAT 1 cut(s) 844
NspI RCATGY 1 cut(s) 551
PceI AGGCCT 2 cut(s) 212, 1170
PctI GAATGC 1 cut(s) 844
PdmI GAANNNNTTC 1 cut(s) 1251
PfeI GAWTC 2 cut(s) 60, 964
PkrI GCNGC 8 cut(s) 8, 425, 509, 517, 652, 674, 1228, 1235
PleI GAGTC 1 cut(s) 1096
PpsI GAGTC 1 cut(s) 1096
Psp124BI GAGCTC 1 cut(s) 787
Psp6I CCWGG 2 cut(s) 328, 502
PspEI GGTNACC 1 cut(s) 22
PspFI CCCAGC 1 cut(s) 518
PspGI CCWGG 2 cut(s) 328, 502
PspN4I GGNNCC 6 cut(s) 102, 337, 501, 935, 1134, 1205
PspPI GGNCC 1 cut(s) 1133
PstNI CAGNNNCTG 1 cut(s) 866
PsuI RGATCY 2 cut(s) 694, 933
PvuII CAGCTG 1 cut(s) 653
RsaI GTAC 3 cut(s) 187, 337, 1004
RsaNI GTAC 3 cut(s) 186, 336, 1003
SacI GAGCTC 1 cut(s) 787
SaqAI TTAA 7 cut(s) 129, 224, 381, 776, 815, 878, 975
SatI GCNGC 8 cut(s) 7, 424, 508, 516, 651, 673, 1227, 1234
Sau3AI GATC 6 cut(s) 415, 489, 694, 933, 989, 1188
Sau96I GGNCC 1 cut(s) 1133
SchI GAGTC 1 cut(s) 1097
ScrFI CCNGG 4 cut(s) 98, 330, 504, 1238
SduI GDGCHC 1 cut(s) 787
SfaNI GCATC 2 cut(s) 613, 847
SfcI CTRYAG 1 cut(s) 1256
SinI GGWCC 1 cut(s) 1133
SmlI CTYRAG 2 cut(s) 786, 968
SmoI CTYRAG 2 cut(s) 786, 968
Sse9I AATT 8 cut(s) 88, 301, 567, 874, 900, 983, 1049, 1250
SseBI AGGCCT 2 cut(s) 212, 1170
SsiI CCGC 4 cut(s) 385, 424, 1231, 1234
SspMI CTAG 7 cut(s) 57, 105, 110, 183, 195, 390, 630
SstI GAGCTC 1 cut(s) 787
StuI AGGCCT 2 cut(s) 212, 1170
StyD4I CCNGG 4 cut(s) 96, 328, 502, 1236
StyI CCWWGG 2 cut(s) 18, 645
TaaI ACNGT 4 cut(s) 581, 868, 1044, 1141
TaiI ACGT 1 cut(s) 826
TaqI TCGA 6 cut(s) 125, 140, 248, 305, 459, 1091
TasI AATT 8 cut(s) 88, 301, 567, 874, 900, 983, 1049, 1250
TatI WGTACW 2 cut(s) 185, 1002
TauI GCSGC 2 cut(s) 426, 1236
TfiI GAWTC 2 cut(s) 60, 964
Tru1I TTAA 7 cut(s) 129, 224, 381, 776, 815, 878, 975
Tru9I TTAA 7 cut(s) 129, 224, 381, 776, 815, 878, 975
TscAI CASTG 1 cut(s) 1074
TseFI GTSAC 3 cut(s) 22, 40, 322
TseI GCWGC 6 cut(s) 6, 507, 515, 650, 672, 1226
Tsp45I GTSAC 3 cut(s) 22, 40, 322
TspDTI ATGAA 4 cut(s) 735, 1136, 1140, 1144
TspRI CASTG 1 cut(s) 1074
VpaK11BI GGWCC 1 cut(s) 1133
XapI RAATTY 4 cut(s) 301, 874, 983, 1250
XceI RCATGY 1 cut(s) 551
XmiI GTMKAC 1 cut(s) 948
XmnI GAANNNNTTC 1 cut(s) 1251
XspI CTAG 7 cut(s) 57, 105, 110, 183, 195, 390, 630
Zsp2I ATGCAT 1 cut(s) 844
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.