MD05G1251900.v1.1

Glutathione S-transferase omega-like 2

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0005011
Physical Location & Seq
Forward (+)
38360270 .. 38363347
3078 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1251900.v1.1.491

Sequence Viewer

Length: 969 bp
ATGGCTCAAACTACGGAGATATCACAATCCGGTGCATTTTTGAGAACTGCTTCTGTGTTCCGTAACTTCATTTCACGGGACCCAAATTCGCAGTTTCTGGCAGAACCTGGGAGATATCATCTGTATATCTCGTATGGTTGCCCTTGGGCTTCTAGGTGCCTCGCATACTTGAAAATCAAGGGACTTGAGAAAGCCATCAGCTTTACGTCAGTCAGACCAACATGGGGAAGAACAAAAGAAACCGATGAGCATATGGGGTGGGTGTTTCCTGCTTCCGATACCGAGGTAGTTGGAGCTGAACCGGACCCTTTGAACGGGGCAAAAAGTATTAGAGAACTTTACGAACTTGCAAGCTCACAGTATACCGGAAAGTACACAGTTCCAGTTCTATGGGATAAAAAACTTAAAACAATTGTCAACAACGAGAGTGCAGAGATTATTCGTATGTTTAATACTGAATTCAATGATACAGCTGAAAACGCATCTTTGGACTTGTATCCTTCTCACTTGCAATCTCAAATCGATCAGACGAATGAATGGATATATGACAAGATAAATAACGGTGTCTATAAATGTGGGTTTGCGAGGAAACAGGAGGCTTATGACGAGGCTGTGAAAGAATTGTTCGAAGCTTTGGATAAATGCGAGGAGATACTTAGCAAGCAACGATACTTGTGTGGGAACACATTGTCTGAAGCAGATATTCGGTTGTTTGTCACTCTTATAAGATTCGACGAGGCTTACGCAGTCAACTTCAAGTGCAACAAGAAACTGCTACGAGAATACCCGAATTTGTTTAACTACACGAAAGATATCTTCCAAGTTCCTGGAGTGAGCAGCTCTGTCAACATGGATCACATAAAGCGAGGTTATTACACCATGGCGGCTATCAATCCCTCCGGAATAATTCCTATTGGCTCAAATATCGATTACTCTTCTCCTCATGACAGAGACAGGTTTTCTACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GST_C_2 GST_N_2

Protein Analysis

323

Amino Acids

36.78

Weight (kDa)

5.84

Isoelectric Point (pI)

31.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N_2 PF13409 47 - 152 8.4e-11 Glutathione S-transferase, N-terminal domain
GST_C PF00043 194 - 274 1.2e-09 Glutathione S-transferase, C-terminal domain
GST_C_2 PF13410 198 - 269 3.8e-15 Glutathione S-transferase, C-terminal domain
GST_C_3 PF14497 198 - 279 1.3e-07 Glutathione S-transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 725
AccB1I GGYRCC 1 cut(s) 156
AccI GTMKAC 1 cut(s) 362
AccIII TCCGGA 1 cut(s) 899
AciI CCGC 1 cut(s) 884
AclWI GGATC 1 cut(s) 861
AcsI RAATTY 3 cut(s) 85, 458, 790
AcuI CTGAAG 1 cut(s) 714
AfaI GTAC 1 cut(s) 374
AfiI CCNNNNNNNGG 2 cut(s) 224, 314
AgsI TTSAA 4 cut(s) 172, 313, 463, 757
AjnI CCWGG 2 cut(s) 106, 826
AluBI AGCT 6 cut(s) 201, 296, 354, 473, 632, 840
AluI AGCT 6 cut(s) 201, 296, 354, 473, 632, 840
Alw26I GTCTC 1 cut(s) 945
AlwI GGATC 1 cut(s) 861
AlwNI CAGNNNCTG 2 cut(s) 97, 107
Aor13HI TCCGGA 1 cut(s) 899
ApeKI GCWGC 1 cut(s) 837
ApoI RAATTY 3 cut(s) 85, 458, 790
Asp700I GAANNNNTTC 1 cut(s) 49
AspS9I GGNCC 2 cut(s) 79, 304
AsuII TTCGAA 1 cut(s) 627
AvaII GGWCC 2 cut(s) 79, 304
BaeI ACNNNNGTAYC 4 cut(s) 270, 303, 661, 694
BanI GGYRCC 1 cut(s) 156
BbvI GCAGC 1 cut(s) 849
BccI CCATC 1 cut(s) 203
BciT130I CCWGG 2 cut(s) 108, 828
BciVI GTATCC 1 cut(s) 507
BcoDI GTCTC 1 cut(s) 945
BfaI CTAG 1 cut(s) 153
BfuI GTATCC 1 cut(s) 507
BisI GCNGC 2 cut(s) 838, 885
BlsI GCNGC 2 cut(s) 839, 886
Bme1390I CCNGG 2 cut(s) 108, 828
Bme18I GGWCC 2 cut(s) 79, 304
BmgT120I GGNCC 2 cut(s) 79, 304
BmiI GGNNCC 4 cut(s) 80, 81, 158, 306
BmrFI CCNGG 2 cut(s) 108, 828
BmsI GCATC 1 cut(s) 491
BpmI CTGGAG 1 cut(s) 849
Bpu14I TTCGAA 1 cut(s) 627
BpuEI CTTGAG 1 cut(s) 206
Bsa29I ATCGAT 2 cut(s) 522, 927
BsaJI CCNNGG 4 cut(s) 107, 143, 282, 879
BsaWI WCCGGW 4 cut(s) 29, 301, 365, 899
Bsc4I CCNNNNNNNGG 2 cut(s) 224, 314
Bse1I ACTGG 1 cut(s) 383
BseAI TCCGGA 1 cut(s) 899
BseBI CCWGG 2 cut(s) 108, 828
BseCI ATCGAT 2 cut(s) 522, 927
BseDI CCNNGG 4 cut(s) 107, 143, 282, 879
BseLI CCNNNNNNNGG 2 cut(s) 224, 314
BseNI ACTGG 1 cut(s) 383
BseRI GAGGAG 2 cut(s) 662, 930
BseXI GCAGC 1 cut(s) 849
BsgI GTGCAG 1 cut(s) 450
BshNI GGYRCC 1 cut(s) 156
BshVI ATCGAT 2 cut(s) 522, 927
BsiSI CCGG 4 cut(s) 30, 302, 366, 900
BslFI GGGAC 2 cut(s) 92, 195
BslI CCNNNNNNNGG 2 cut(s) 224, 314
BsmAI GTCTC 1 cut(s) 945
BsmFI GGGAC 2 cut(s) 92, 195
Bsp119I TTCGAA 1 cut(s) 627
Bsp13I TCCGGA 1 cut(s) 899
Bsp143I GATC 2 cut(s) 523, 853
Bsp19I CCATGG 1 cut(s) 879
BspACI CCGC 1 cut(s) 884
BspDI ATCGAT 2 cut(s) 522, 927
BspEI TCCGGA 1 cut(s) 899
BspHI TCATGA 1 cut(s) 943
BspLI GGNNCC 4 cut(s) 80, 81, 158, 306
BspPI GGATC 1 cut(s) 861
BspT104I TTCGAA 1 cut(s) 627
BspT107I GGYRCC 1 cut(s) 156
BsrI ACTGG 1 cut(s) 383
BssECI CCNNGG 4 cut(s) 107, 143, 282, 879
BssMI GATC 2 cut(s) 523, 853
BssNAI GTATAC 1 cut(s) 363
BssT1I CCWWGG 2 cut(s) 143, 879
Bst1107I GTATAC 1 cut(s) 363
Bst2UI CCWGG 2 cut(s) 108, 828
Bst4CI ACNGT 3 cut(s) 360, 379, 563
Bst6I CTCTTC 1 cut(s) 940
BstBI TTCGAA 1 cut(s) 627
BstC8I GCNNGC 2 cut(s) 352, 662
BstDEI CTNAG 1 cut(s) 656
BstDSI CCRYGG 1 cut(s) 879
BstKTI GATC 2 cut(s) 526, 856
BstMAI GTCTC 1 cut(s) 945
BstMBI GATC 2 cut(s) 523, 853
BstMWI GCNNNNNNNGC 1 cut(s) 479
BstNI CCWGG 2 cut(s) 108, 828
BstSCI CCNGG 2 cut(s) 106, 826
BstV1I GCAGC 1 cut(s) 849
BstXI CCANNNNNNTGG 2 cut(s) 390, 827
BstZ17I GTATAC 1 cut(s) 363
Bsu15I ATCGAT 2 cut(s) 522, 927
BsuI GTATCC 1 cut(s) 507
BsuTUI ATCGAT 2 cut(s) 522, 927
BtgI CCRYGG 1 cut(s) 879
Cac8I GCNNGC 2 cut(s) 352, 662
CaiI CAGNNNCTG 2 cut(s) 97, 107
CciI TCATGA 1 cut(s) 943
Cfr13I GGNCC 2 cut(s) 79, 304
ClaI ATCGAT 2 cut(s) 522, 927
Csp6I GTAC 1 cut(s) 373
CviAII CATG 4 cut(s) 222, 850, 880, 944
CviQI GTAC 1 cut(s) 373
DdeI CTNAG 1 cut(s) 656
DpnI GATC 2 cut(s) 525, 855
DpnII GATC 2 cut(s) 523, 853
Eam1104I CTCTTC 1 cut(s) 940
EarI CTCTTC 1 cut(s) 940
Eco130I CCWWGG 2 cut(s) 143, 879
Eco32I GATATC 3 cut(s) 21, 116, 814
Eco47I GGWCC 2 cut(s) 79, 304
Eco57I CTGAAG 1 cut(s) 714
EcoO109I RGGNCCY 1 cut(s) 79
EcoRI GAATTC 1 cut(s) 458
EcoRII CCWGG 2 cut(s) 106, 826
EcoRV GATATC 3 cut(s) 21, 116, 814
EcoT14I CCWWGG 2 cut(s) 143, 879
ErhI CCWWGG 2 cut(s) 143, 879
FaeI CATG 4 cut(s) 225, 853, 883, 947
FaqI GGGAC 2 cut(s) 92, 195
FatI CATG 4 cut(s) 221, 849, 879, 943
FauNDI CATATG 1 cut(s) 252
FblI GTMKAC 1 cut(s) 362
Fnu4HI GCNGC 2 cut(s) 838, 885
Fsp4HI GCNGC 2 cut(s) 838, 885
FspBI CTAG 1 cut(s) 153
GluI GCNGC 2 cut(s) 838, 885
GsuI CTGGAG 1 cut(s) 849
HapII CCGG 4 cut(s) 30, 302, 366, 900
Hin1II CATG 4 cut(s) 225, 853, 883, 947
HincII GTYRAC 3 cut(s) 418, 751, 847
HindII GTYRAC 3 cut(s) 418, 751, 847
HindIII AAGCTT 1 cut(s) 630
HinfI GANTC 1 cut(s) 729
HpaII CCGG 4 cut(s) 30, 302, 366, 900
Hpy166II GTNNAC 5 cut(s) 363, 375, 418, 751, 847
Hpy188I TCNGA 4 cut(s) 215, 277, 528, 694
Hpy188III TCNNGA 2 cut(s) 900, 944
Hpy8I GTNNAC 5 cut(s) 363, 375, 418, 751, 847
Hpy99I CGWCG 1 cut(s) 737
HpyAV CCTTC 1 cut(s) 510
HpyCH4III ACNGT 3 cut(s) 360, 379, 563
HpyCH4IV ACGT 1 cut(s) 206
HpyCH4V TGCA 5 cut(s) 35, 350, 431, 511, 762
HpyF10VI GCNNNNNNNGC 1 cut(s) 479
HpyF3I CTNAG 1 cut(s) 656
HpySE526I ACGT 1 cut(s) 206
Hsp92II CATG 4 cut(s) 225, 853, 883, 947
KflI GGGWCCC 1 cut(s) 79
Kpn2I TCCGGA 1 cut(s) 899
Kzo9I GATC 2 cut(s) 523, 853
LmnI GCTCC 1 cut(s) 293
Lsp1109I GCAGC 1 cut(s) 849
LweI GCATC 1 cut(s) 491
MaeI CTAG 1 cut(s) 153
MaeII ACGT 1 cut(s) 206
MaeIII GTNAC 2 cut(s) 62, 715
MalI GATC 2 cut(s) 525, 855
MboI GATC 2 cut(s) 523, 853
MboII GAAGA 3 cut(s) 240, 808, 927
MfeI CAATTG 1 cut(s) 411
MluCI AATT 6 cut(s) 85, 411, 458, 620, 790, 906
MmeI TCCRAC 1 cut(s) 271
MroI TCCGGA 1 cut(s) 899
MroXI GAANNNNTTC 1 cut(s) 49
MseI TTAA 3 cut(s) 405, 450, 798
MspA1I CMGCKG 1 cut(s) 473
MspI CCGG 4 cut(s) 30, 302, 366, 900
MspR9I CCNGG 2 cut(s) 108, 828
MunI CAATTG 1 cut(s) 411
MvaI CCWGG 2 cut(s) 108, 828
MwoI GCNNNNNNNGC 1 cut(s) 479
NcoI CCATGG 1 cut(s) 879
NdeI CATATG 1 cut(s) 252
NdeII GATC 2 cut(s) 523, 853
NlaIII CATG 4 cut(s) 225, 853, 883, 947
NlaIV GGNNCC 4 cut(s) 80, 81, 158, 306
NmuCI GTSAC 1 cut(s) 715
NspV TTCGAA 1 cut(s) 627
PagI TCATGA 1 cut(s) 943
PdmI GAANNNNTTC 1 cut(s) 49
PfeI GAWTC 1 cut(s) 729
PfoI TCCNGGA 1 cut(s) 826
PkrI GCNGC 2 cut(s) 839, 886
PpuMI RGGWCCY 1 cut(s) 79
PsiI TTATAA 1 cut(s) 725
Psp5II RGGWCCY 1 cut(s) 79
Psp6I CCWGG 2 cut(s) 106, 826
PspGI CCWGG 2 cut(s) 106, 826
PspN4I GGNNCC 4 cut(s) 80, 81, 158, 306
PspPI GGNCC 2 cut(s) 79, 304
PspPPI RGGWCCY 1 cut(s) 79
PstNI CAGNNNCTG 2 cut(s) 97, 107
PvuII CAGCTG 1 cut(s) 473
RsaI GTAC 1 cut(s) 374
RsaNI GTAC 1 cut(s) 373
SaqAI TTAA 3 cut(s) 405, 450, 798
SatI GCNGC 2 cut(s) 838, 885
Sau3AI GATC 2 cut(s) 523, 853
Sau96I GGNCC 2 cut(s) 79, 304
ScrFI CCNGG 2 cut(s) 108, 828
SfaNI GCATC 1 cut(s) 491
SfuI TTCGAA 1 cut(s) 627
SinI GGWCC 2 cut(s) 79, 304
SmlI CTYRAG 1 cut(s) 185
SmoI CTYRAG 1 cut(s) 185
Sse9I AATT 6 cut(s) 85, 411, 458, 620, 790, 906
SsiI CCGC 1 cut(s) 884
SspMI CTAG 1 cut(s) 153
StyD4I CCNGG 2 cut(s) 106, 826
StyI CCWWGG 2 cut(s) 143, 879
TaaI ACNGT 3 cut(s) 360, 379, 563
TaiI ACGT 1 cut(s) 209
TaqI TCGA 4 cut(s) 522, 627, 732, 927
TasI AATT 6 cut(s) 85, 411, 458, 620, 790, 906
TatI WGTACW 1 cut(s) 372
TauI GCSGC 1 cut(s) 887
TfiI GAWTC 1 cut(s) 729
Tru1I TTAA 3 cut(s) 405, 450, 798
Tru9I TTAA 3 cut(s) 405, 450, 798
TseFI GTSAC 1 cut(s) 715
TseI GCWGC 1 cut(s) 837
Tsp45I GTSAC 1 cut(s) 715
TspDTI ATGAA 2 cut(s) 58, 549
TspGWI ACGGA 2 cut(s) 29, 50
VpaK11BI GGWCC 2 cut(s) 79, 304
XapI RAATTY 3 cut(s) 85, 458, 790
XmiI GTMKAC 1 cut(s) 362
XmnI GAANNNNTTC 1 cut(s) 49
XspI CTAG 1 cut(s) 153
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.