MD05G1252400.v1.1

Glutathione S-transferase omega-like 2

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0005011
Physical Location & Seq
Forward (+)
38385538 .. 38388983
3446 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1252400.v1.1.491

Sequence Viewer

Length: 957 bp
ATGGAGATATCACAATCCGGTGCATTTGTGAGAGCTCCTTCTGTTTTTCGTAACTTTATTTCACGGGACCCAAATTCGCAGTTTCCGGCAGAACCTGGGAGATATCATCTGTATATATCATATCTTTGCCCTTGGGCTTGTAGGTGCCTGGCATACTTGAAACTCAAAGGACTTGAGAAAGCCATCAGCTTTACGTCGGTCAAACCGAAATGGGAAAGAACAAAAGAAAGTGATGAGCATATGGGGTGGGTTTTTCCTGCTTCAGATACCGAGGTAGCTGGAGCTGAACCTGACCCTTTGAACGGAGCAAAAACTATTAGAGAACTTTACGATCTTGCAAGCACTCATTATACCGGAAAGTACACAGTTCCAGTTCTATGGGATAAAAAACTTAAAACAATTGTCAACAATGAGAGTTCAGAGATTATTCGTATGTTTAATACCGAATTCAACGACATAGCTGAAAACGCATCTTTGGACTTGTATCCTCCTCACTTGCAATCTCAGATTGATCAGACGAATGAATGGATATATAACATGATAAATAACGGTGTCTATAAATGTGGGTTTGCGAGGAAGCAGGAGCCTTATGACGAGGCTGTGAAAGAATTGTTCGAAGCTTTGGATAAATGCGAGGAGATACTTAGCAAGCAACGCTACCTGTGTGGGAACACAATGTCTGAAGCAGATATTCGGTTGTTTGTCACTCTTATAAGATTCGACGAGGCTTACGCAGTCAACTTCAAGTGCAACAAGAAACTGCTACGAGAATACCCGAATTTGTTTAACTACACGAAAGATATCTTCCAAGTTCCTGGAGTGAGCAGCACAGTCAACATAGATCACATAAAGCGAGGCTATTACAACATTGCGGCTATCAATCCATTCGGAATAATTCCTGTCGGCCCACATATCGACTACTCTTCTCCTCATGACAGAGACAGGTTTTCTACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GST_C_2 GST_N_2

Protein Analysis

319

Amino Acids

36.63

Weight (kDa)

6.02

Isoelectric Point (pI)

41.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N_2 PF13409 43 - 148 1.8e-09 Glutathione S-transferase, N-terminal domain
GST_C PF00043 190 - 270 8.8e-09 Glutathione S-transferase, C-terminal domain
GST_C_2 PF13410 196 - 265 1.6e-13 Glutathione S-transferase, C-terminal domain
GST_C_3 PF14497 202 - 275 5.5e-07 Glutathione S-transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 713
AccB1I GGYRCC 1 cut(s) 144
AciI CCGC 1 cut(s) 872
AcsI RAATTY 3 cut(s) 73, 446, 778
AcuI CTGAAG 2 cut(s) 246, 702
AfaI GTAC 1 cut(s) 362
AfiI CCNNNNNNNGG 1 cut(s) 302
AgsI TTSAA 4 cut(s) 160, 301, 451, 745
AjnI CCWGG 3 cut(s) 94, 147, 814
AluBI AGCT 6 cut(s) 35, 189, 278, 284, 461, 620
AluI AGCT 6 cut(s) 35, 189, 278, 284, 461, 620
Alw21I GWGCWC 1 cut(s) 37
Alw26I GTCTC 1 cut(s) 933
AlwNI CAGNNNCTG 1 cut(s) 95
AoxI GGCC 1 cut(s) 904
ApeKI GCWGC 1 cut(s) 825
ApoI RAATTY 3 cut(s) 73, 446, 778
AspS9I GGNCC 2 cut(s) 67, 905
AsuII TTCGAA 1 cut(s) 615
AvaII GGWCC 1 cut(s) 67
BaeI ACNNNNGTAYC 2 cut(s) 258, 291
BanI GGYRCC 1 cut(s) 144
BanII GRGCYC 1 cut(s) 37
Bbv12I GWGCWC 1 cut(s) 37
BbvI GCAGC 1 cut(s) 837
BccI CCATC 1 cut(s) 191
BciT130I CCWGG 3 cut(s) 96, 149, 816
BciVI GTATCC 1 cut(s) 495
BclI TGATCA 1 cut(s) 511
BcoDI GTCTC 1 cut(s) 933
BfuI GTATCC 1 cut(s) 495
BisI GCNGC 2 cut(s) 826, 873
BlsI GCNGC 2 cut(s) 827, 874
Bme1390I CCNGG 3 cut(s) 96, 149, 816
Bme18I GGWCC 1 cut(s) 67
BmgT120I GGNCC 2 cut(s) 67, 905
BmiI GGNNCC 4 cut(s) 68, 69, 146, 585
BmrFI CCNGG 3 cut(s) 96, 149, 816
BmsI GCATC 1 cut(s) 479
BpmI CTGGAG 2 cut(s) 300, 837
Bpu14I TTCGAA 1 cut(s) 615
BpuEI CTTGAG 1 cut(s) 194
BsaJI CCNNGG 3 cut(s) 95, 131, 270
BsaWI WCCGGW 2 cut(s) 17, 353
Bsc4I CCNNNNNNNGG 1 cut(s) 302
Bse1I ACTGG 1 cut(s) 371
Bse3DI GCAATG 1 cut(s) 867
BseBI CCWGG 3 cut(s) 96, 149, 816
BseDI CCNNGG 3 cut(s) 95, 131, 270
BseLI CCNNNNNNNGG 1 cut(s) 302
BseMI GCAATG 1 cut(s) 867
BseMII CTCAG 1 cut(s) 518
BseNI ACTGG 1 cut(s) 371
BseRI GAGGAG 3 cut(s) 480, 650, 918
BseXI GCAGC 1 cut(s) 837
BshFI GGCC 1 cut(s) 906
BshNI GGYRCC 1 cut(s) 144
BsiHKAI GWGCWC 1 cut(s) 37
BsiSI CCGG 3 cut(s) 18, 86, 354
BslFI GGGAC 1 cut(s) 80
BslI CCNNNNNNNGG 1 cut(s) 302
BsmAI GTCTC 1 cut(s) 933
BsmFI GGGAC 1 cut(s) 80
BsnI GGCC 1 cut(s) 906
Bsp119I TTCGAA 1 cut(s) 615
Bsp1286I GDGCHC 1 cut(s) 37
Bsp143I GATC 3 cut(s) 331, 511, 841
BspACI CCGC 1 cut(s) 872
BspANI GGCC 1 cut(s) 906
BspCNI CTCAG 1 cut(s) 517
BspHI TCATGA 1 cut(s) 931
BspLI GGNNCC 4 cut(s) 68, 69, 146, 585
BspT104I TTCGAA 1 cut(s) 615
BspT107I GGYRCC 1 cut(s) 144
BsrDI GCAATG 1 cut(s) 867
BsrI ACTGG 1 cut(s) 371
BssECI CCNNGG 3 cut(s) 95, 131, 270
BssMI GATC 3 cut(s) 331, 511, 841
BssT1I CCWWGG 1 cut(s) 131
Bst2UI CCWGG 3 cut(s) 96, 149, 816
Bst4CI ACNGT 3 cut(s) 367, 551, 832
Bst6I CTCTTC 1 cut(s) 928
BstBI TTCGAA 1 cut(s) 615
BstC8I GCNNGC 2 cut(s) 340, 650
BstDEI CTNAG 2 cut(s) 504, 644
BstKTI GATC 3 cut(s) 334, 514, 844
BstMAI GTCTC 1 cut(s) 933
BstMBI GATC 3 cut(s) 331, 511, 841
BstMWI GCNNNNNNNGC 2 cut(s) 467, 654
BstNI CCWGG 3 cut(s) 96, 149, 816
BstSCI CCNGG 3 cut(s) 94, 147, 814
BstV1I GCAGC 1 cut(s) 837
BstXI CCANNNNNNTGG 2 cut(s) 378, 815
BsuI GTATCC 1 cut(s) 495
BsuRI GGCC 1 cut(s) 906
Cac8I GCNNGC 2 cut(s) 340, 650
CaiI CAGNNNCTG 1 cut(s) 95
CciI TCATGA 1 cut(s) 931
Cfr13I GGNCC 2 cut(s) 67, 905
Csp6I GTAC 1 cut(s) 361
CviAII CATG 2 cut(s) 538, 932
CviQI GTAC 1 cut(s) 361
DdeI CTNAG 2 cut(s) 504, 644
DpnI GATC 3 cut(s) 333, 513, 843
DpnII GATC 3 cut(s) 331, 511, 841
Eam1104I CTCTTC 1 cut(s) 928
EarI CTCTTC 1 cut(s) 928
Ecl136II GAGCTC 1 cut(s) 35
Eco130I CCWWGG 1 cut(s) 131
Eco24I GRGCYC 1 cut(s) 37
Eco32I GATATC 3 cut(s) 9, 104, 802
Eco47I GGWCC 1 cut(s) 67
Eco53kI GAGCTC 1 cut(s) 35
Eco57I CTGAAG 2 cut(s) 246, 702
EcoICRI GAGCTC 1 cut(s) 35
EcoO109I RGGNCCY 1 cut(s) 67
EcoRI GAATTC 1 cut(s) 446
EcoRII CCWGG 3 cut(s) 94, 147, 814
EcoRV GATATC 3 cut(s) 9, 104, 802
EcoT14I CCWWGG 1 cut(s) 131
EcoT38I GRGCYC 1 cut(s) 37
ErhI CCWWGG 1 cut(s) 131
FaeI CATG 2 cut(s) 541, 935
FaqI GGGAC 1 cut(s) 80
FatI CATG 2 cut(s) 537, 931
FauNDI CATATG 1 cut(s) 240
FbaI TGATCA 1 cut(s) 511
Fnu4HI GCNGC 2 cut(s) 826, 873
FriOI GRGCYC 1 cut(s) 37
Fsp4HI GCNGC 2 cut(s) 826, 873
GluI GCNGC 2 cut(s) 826, 873
GsuI CTGGAG 2 cut(s) 300, 837
HaeIII GGCC 1 cut(s) 906
HapII CCGG 3 cut(s) 18, 86, 354
Hin1II CATG 2 cut(s) 541, 935
HincII GTYRAC 3 cut(s) 406, 739, 835
HindII GTYRAC 3 cut(s) 406, 739, 835
HindIII AAGCTT 1 cut(s) 618
HinfI GANTC 1 cut(s) 717
HpaII CCGG 3 cut(s) 18, 86, 354
Hpy166II GTNNAC 4 cut(s) 363, 406, 739, 835
Hpy188I TCNGA 6 cut(s) 265, 421, 507, 516, 682, 890
Hpy188III TCNNGA 1 cut(s) 932
Hpy8I GTNNAC 4 cut(s) 363, 406, 739, 835
Hpy99I CGWCG 2 cut(s) 199, 725
HpyAV CCTTC 1 cut(s) 48
HpyCH4III ACNGT 3 cut(s) 367, 551, 832
HpyCH4IV ACGT 1 cut(s) 194
HpyCH4V TGCA 4 cut(s) 23, 338, 499, 750
HpyF10VI GCNNNNNNNGC 2 cut(s) 467, 654
HpyF3I CTNAG 2 cut(s) 504, 644
HpySE526I ACGT 1 cut(s) 194
Hsp92II CATG 2 cut(s) 541, 935
KflI GGGWCCC 1 cut(s) 67
Ksp22I TGATCA 1 cut(s) 511
Kzo9I GATC 3 cut(s) 331, 511, 841
LmnI GCTCC 4 cut(s) 40, 281, 305, 583
Lsp1109I GCAGC 1 cut(s) 837
LweI GCATC 1 cut(s) 479
MaeII ACGT 1 cut(s) 194
MaeIII GTNAC 2 cut(s) 50, 703
MalI GATC 3 cut(s) 333, 513, 843
MboI GATC 3 cut(s) 331, 511, 841
MboII GAAGA 2 cut(s) 796, 915
MfeI CAATTG 1 cut(s) 399
MhlI GDGCHC 1 cut(s) 37
MluCI AATT 6 cut(s) 73, 399, 446, 608, 778, 894
MnlI CCTC 9 cut(s) 265, 498, 501, 567, 589, 628, 718, 848, 939
MseI TTAA 3 cut(s) 393, 438, 786
MspI CCGG 3 cut(s) 18, 86, 354
MspR9I CCNGG 3 cut(s) 96, 149, 816
MunI CAATTG 1 cut(s) 399
MvaI CCWGG 3 cut(s) 96, 149, 816
MwoI GCNNNNNNNGC 2 cut(s) 467, 654
NdeI CATATG 1 cut(s) 240
NdeII GATC 3 cut(s) 331, 511, 841
NlaIII CATG 2 cut(s) 541, 935
NlaIV GGNNCC 4 cut(s) 68, 69, 146, 585
NmuCI GTSAC 1 cut(s) 703
NspV TTCGAA 1 cut(s) 615
PagI TCATGA 1 cut(s) 931
PcsI WCGNNNNNNNCGW 1 cut(s) 203
PfeI GAWTC 1 cut(s) 717
PfoI TCCNGGA 1 cut(s) 814
PkrI GCNGC 2 cut(s) 827, 874
PpuMI RGGWCCY 1 cut(s) 67
PsiI TTATAA 1 cut(s) 713
Psp124BI GAGCTC 1 cut(s) 37
Psp5II RGGWCCY 1 cut(s) 67
Psp6I CCWGG 3 cut(s) 94, 147, 814
PspGI CCWGG 3 cut(s) 94, 147, 814
PspN4I GGNNCC 4 cut(s) 68, 69, 146, 585
PspPI GGNCC 2 cut(s) 67, 905
PspPPI RGGWCCY 1 cut(s) 67
PstNI CAGNNNCTG 1 cut(s) 95
RsaI GTAC 1 cut(s) 362
RsaNI GTAC 1 cut(s) 361
SacI GAGCTC 1 cut(s) 37
SaqAI TTAA 3 cut(s) 393, 438, 786
SatI GCNGC 2 cut(s) 826, 873
Sau3AI GATC 3 cut(s) 331, 511, 841
Sau96I GGNCC 2 cut(s) 67, 905
ScrFI CCNGG 3 cut(s) 96, 149, 816
SduI GDGCHC 1 cut(s) 37
SfaNI GCATC 1 cut(s) 479
SfuI TTCGAA 1 cut(s) 615
SinI GGWCC 1 cut(s) 67
SmlI CTYRAG 1 cut(s) 173
SmoI CTYRAG 1 cut(s) 173
Sse9I AATT 6 cut(s) 73, 399, 446, 608, 778, 894
SsiI CCGC 1 cut(s) 872
SstI GAGCTC 1 cut(s) 37
StyD4I CCNGG 3 cut(s) 94, 147, 814
StyI CCWWGG 1 cut(s) 131
TaaI ACNGT 3 cut(s) 367, 551, 832
TaiI ACGT 1 cut(s) 197
TaqI TCGA 3 cut(s) 615, 720, 915
TaqII GACCGA 1 cut(s) 187
TasI AATT 6 cut(s) 73, 399, 446, 608, 778, 894
TatI WGTACW 1 cut(s) 360
TauI GCSGC 1 cut(s) 875
TfiI GAWTC 1 cut(s) 717
Tru1I TTAA 3 cut(s) 393, 438, 786
Tru9I TTAA 3 cut(s) 393, 438, 786
TseFI GTSAC 1 cut(s) 703
TseI GCWGC 1 cut(s) 825
Tsp45I GTSAC 1 cut(s) 703
TspDTI ATGAA 1 cut(s) 537
TspGWI ACGGA 1 cut(s) 318
VpaK11BI GGWCC 1 cut(s) 67
XapI RAATTY 3 cut(s) 73, 446, 778
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.