Rh5AG146700

Glutathione S-transferase omega-like 2

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0005011
Physical Location & Seq
Reverse (-)
15456736 .. 15458085
1350 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG146700.1

Sequence Viewer

Length: 978 bp
ATGGCTCGGTCTGCACTGGATGAGGTCTCACAATCTGGTGCATTTGTGAGAAGTGCTTCTGAATTCCGTAACTTCATTTCACGAGACCCGAACTCGCAATTTCCAGCAGAAGCTGGGAGATATCATCTGTATATATCATATGCTTGCCCGTGGGCGTCAAGGTGCCTTGCATACTTGAATATTAAAGGACTTCAGAAAGCTATCAGCTTTACGTCGGTCAAACCTATATGGGAAAGAACAAAAGAAAGTGATGAGCATATGGGATGGGTTTTTCCTTCTTCAGATAAGGAGCTAGCAGGAGCTGAACCTGACCCTTTGAATGGAGCAAAAAGTATACGAGAACTTTATGAGATTGCTAGTACAAAATACACTGGAAAGTACACTGTTCCGGTTCTATGGGATAAAAAGCTTGGAACAATTGTCAGTAATGAGAGTTCTGAGATTATTCGCATGTTTAATACTGAATTCAACAGCATAGCAGAGACCCCGGCTTTGGACTTGTATCCCGATCACTTGCAATCCCAAGTCAATCAGACTAATGAATGGATATACGACAAGATAAATAACGGTGTCTATAAATGTGGGTTTGCCAAGAAGCAGGAGCCTTATGATGAGGCTGTGAAACAGTTGTATGAAGCTTTGGACAGATGTGAGGAGATACTTAGCAAGCAACGATACCTCTGTGGAAACACATTATCTGAAGCCGATATTCGTTTGTTTGTGACTCTCATAAGATTTGATGAGGTTTATGCAGTCCACTTCAAGTGCAACAAGAGACTCCTGCGAGAGTACCCAAATCTGTTTAACTACACCAAGGACATTTTCCAAGTTCCTGGAATGAGCACCACAGTCCAGGTGGATCACATCAAACGACACTACTATGGAAGCCATCCTTCTATCAATCCCTTCGGGATAGTTCCTTCCGGCCCAAACATCGACTACTCTTCCCCTCATGACAGACACAAGTTTTCTGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GST_C_2 GST_N_2

Protein Analysis

325

Amino Acids

37.26

Weight (kDa)

6.52

Isoelectric Point (pI)

47.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N_2 PF13409 48 - 154 4e-10 Glutathione S-transferase, N-terminal domain
GST_C PF00043 196 - 276 2.3e-09 Glutathione S-transferase, C-terminal domain
GST_C_2 PF13410 202 - 271 1.1e-14 Glutathione S-transferase, C-terminal domain
GST_C_3 PF14497 205 - 279 6.2e-07 Glutathione S-transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 162
AccI GTMKAC 1 cut(s) 334
AclWI GGATC 1 cut(s) 867
AcsI RAATTY 2 cut(s) 62, 464
AcuI CTGAAG 3 cut(s) 176, 264, 720
AcyI GRCGYC 1 cut(s) 155
AfaI GTAC 3 cut(s) 361, 380, 791
AfiI CCNNNNNNNGG 2 cut(s) 320, 493
AgsI TTSAA 4 cut(s) 178, 319, 469, 763
AjnI CCWGG 2 cut(s) 832, 852
AjuI GAANNNNNNNTTGG 2 cut(s) 806, 838
AluBI AGCT 7 cut(s) 113, 200, 207, 292, 302, 409, 638
AluI AGCT 7 cut(s) 113, 200, 207, 292, 302, 409, 638
Alw21I GWGCWC 1 cut(s) 845
Alw26I GTCTC 4 cut(s) 31, 78, 476, 769
AlwI GGATC 1 cut(s) 867
AlwNI CAGNNNCTG 2 cut(s) 113, 302
AoxI GGCC 1 cut(s) 925
ApoI RAATTY 2 cut(s) 62, 464
ArsI GACNNNNNNTTYG 2 cut(s) 475, 507
Asp700I GAANNNNTTC 1 cut(s) 55
AspS9I GGNCC 1 cut(s) 926
AsuC2I CCSGG 1 cut(s) 488
AsuNHI GCTAGC 1 cut(s) 292
BaeI ACNNNNGTAYC 2 cut(s) 667, 700
BanI GGYRCC 1 cut(s) 162
BauI CACGAG 1 cut(s) 81
Bbv12I GWGCWC 1 cut(s) 845
BccI CCATC 2 cut(s) 258, 897
BciT130I CCWGG 2 cut(s) 834, 854
BciVI GTATCC 1 cut(s) 513
BcnI CCSGG 1 cut(s) 488
BcoDI GTCTC 4 cut(s) 31, 78, 476, 769
BfaI CTAG 2 cut(s) 293, 357
BfuI GTATCC 1 cut(s) 513
Bme1390I CCNGG 3 cut(s) 488, 834, 854
BmgT120I GGNCC 1 cut(s) 926
BmiI GGNNCC 2 cut(s) 164, 603
BmrFI CCNGG 3 cut(s) 488, 834, 854
BmtI GCTAGC 1 cut(s) 296
BpuMI CCSGG 1 cut(s) 488
BsaHI GRCGYC 1 cut(s) 155
BsaI GGTCTC 3 cut(s) 31, 78, 476
BsaJI CCNNGG 3 cut(s) 149, 486, 813
BsaWI WCCGGW 1 cut(s) 388
Bsc4I CCNNNNNNNGG 2 cut(s) 320, 493
Bse1I ACTGG 2 cut(s) 21, 376
BseBI CCWGG 2 cut(s) 834, 854
BseDI CCNNGG 3 cut(s) 149, 486, 813
BseGI GGATG 3 cut(s) 25, 269, 889
BseLI CCNNNNNNNGG 2 cut(s) 320, 493
BseMII CTCAG 1 cut(s) 429
BseNI ACTGG 2 cut(s) 21, 376
BseRI GAGGAG 1 cut(s) 668
BseYI CCCAGC 1 cut(s) 113
BshFI GGCC 1 cut(s) 927
BshNI GGYRCC 1 cut(s) 162
BsiHKAI GWGCWC 1 cut(s) 845
BsiSI CCGG 3 cut(s) 389, 488, 924
BslI CCNNNNNNNGG 2 cut(s) 320, 493
BsmAI GTCTC 4 cut(s) 31, 78, 476, 769
BsnI GGCC 1 cut(s) 927
Bso31I GGTCTC 3 cut(s) 31, 78, 476
Bsp1286I GDGCHC 1 cut(s) 845
Bsp143I GATC 2 cut(s) 508, 859
BspANI GGCC 1 cut(s) 927
BspCNI CTCAG 1 cut(s) 430
BspHI TCATGA 1 cut(s) 952
BspLI GGNNCC 2 cut(s) 164, 603
BspOI GCTAGC 1 cut(s) 296
BspPI GGATC 1 cut(s) 867
BspT107I GGYRCC 1 cut(s) 162
BspTNI GGTCTC 3 cut(s) 31, 78, 476
BsrI ACTGG 2 cut(s) 21, 376
BssECI CCNNGG 3 cut(s) 149, 486, 813
BssMI GATC 2 cut(s) 508, 859
BssNAI GTATAC 1 cut(s) 335
BssNI GRCGYC 1 cut(s) 155
BssSI CACGAG 1 cut(s) 81
BssT1I CCWWGG 1 cut(s) 813
Bst1107I GTATAC 1 cut(s) 335
Bst2BI CACGAG 1 cut(s) 81
Bst2UI CCWGG 2 cut(s) 834, 854
Bst4CI ACNGT 4 cut(s) 385, 569, 627, 850
Bst6I CTCTTC 1 cut(s) 949
BstACI GRCGYC 1 cut(s) 155
BstC8I GCNNGC 3 cut(s) 145, 294, 668
BstDEI CTNAG 2 cut(s) 438, 662
BstDSI CCRYGG 1 cut(s) 149
BstF5I GGATG 3 cut(s) 25, 269, 889
BstKTI GATC 2 cut(s) 511, 862
BstMAI GTCTC 4 cut(s) 31, 78, 476, 769
BstMBI GATC 2 cut(s) 508, 859
BstMWI GCNNNNNNNGC 1 cut(s) 11
BstNI CCWGG 2 cut(s) 834, 854
BstNSI RCATGY 1 cut(s) 454
BstSCI CCNGG 3 cut(s) 486, 832, 852
BstXI CCANNNNNNTGG 1 cut(s) 833
BstZ17I GTATAC 1 cut(s) 335
BsuI GTATCC 1 cut(s) 513
BsuRI GGCC 1 cut(s) 927
BtgI CCRYGG 1 cut(s) 149
BtsCI GGATG 3 cut(s) 25, 269, 889
BtsIMutI CAGTG 3 cut(s) 14, 369, 381
Cac8I GCNNGC 3 cut(s) 145, 294, 668
CaiI CAGNNNCTG 2 cut(s) 113, 302
CciI TCATGA 1 cut(s) 952
Cfr13I GGNCC 1 cut(s) 926
CseI GACGC 1 cut(s) 144
Csp6I GTAC 3 cut(s) 360, 379, 790
CviAII CATG 2 cut(s) 451, 953
CviQI GTAC 3 cut(s) 360, 379, 790
DdeI CTNAG 2 cut(s) 438, 662
DpnI GATC 2 cut(s) 510, 861
DpnII GATC 2 cut(s) 508, 859
Eam1104I CTCTTC 1 cut(s) 949
EarI CTCTTC 1 cut(s) 949
Eco130I CCWWGG 1 cut(s) 813
Eco31I GGTCTC 3 cut(s) 31, 78, 476
Eco32I GATATC 1 cut(s) 122
Eco57I CTGAAG 3 cut(s) 176, 264, 720
EcoRI GAATTC 2 cut(s) 62, 464
EcoRII CCWGG 2 cut(s) 832, 852
EcoRV GATATC 1 cut(s) 122
EcoT14I CCWWGG 1 cut(s) 813
ErhI CCWWGG 1 cut(s) 813
FaeI CATG 2 cut(s) 454, 956
FalI AAGNNNNNCTT 2 cut(s) 877, 909
FatI CATG 2 cut(s) 450, 952
FauNDI CATATG 2 cut(s) 139, 258
FblI GTMKAC 1 cut(s) 334
FokI GGATG 3 cut(s) 32, 276, 876
FspBI CTAG 2 cut(s) 293, 357
GsaI CCCAGC 1 cut(s) 117
HaeIII GGCC 1 cut(s) 927
HapII CCGG 3 cut(s) 389, 488, 924
HgaI GACGC 1 cut(s) 144
Hin1I GRCGYC 1 cut(s) 155
Hin1II CATG 2 cut(s) 454, 956
HindIII AAGCTT 2 cut(s) 407, 636
HinfI GANTC 2 cut(s) 724, 777
HpaII CCGG 3 cut(s) 389, 488, 924
Hpy166II GTNNAC 3 cut(s) 335, 381, 757
Hpy188I TCNGA 6 cut(s) 61, 195, 283, 439, 534, 700
Hpy188III TCNNGA 4 cut(s) 81, 506, 910, 953
Hpy8I GTNNAC 3 cut(s) 335, 381, 757
Hpy99I CGWCG 1 cut(s) 217
HpyAV CCTTC 4 cut(s) 285, 903, 916, 930
HpyCH4III ACNGT 4 cut(s) 385, 569, 627, 850
HpyCH4IV ACGT 1 cut(s) 212
HpyCH4V TGCA 7 cut(s) 14, 41, 170, 517, 752, 768, 974
HpyF10VI GCNNNNNNNGC 1 cut(s) 11
HpyF3I CTNAG 2 cut(s) 438, 662
HpySE526I ACGT 1 cut(s) 212
Hsp92I GRCGYC 1 cut(s) 155
Hsp92II CATG 2 cut(s) 454, 956
Kzo9I GATC 2 cut(s) 508, 859
LmnI GCTCC 4 cut(s) 289, 299, 323, 601
MaeI CTAG 2 cut(s) 293, 357
MaeII ACGT 1 cut(s) 212
MaeIII GTNAC 2 cut(s) 68, 721
MalI GATC 2 cut(s) 510, 861
MboI GATC 2 cut(s) 508, 859
MboII GAAGA 2 cut(s) 270, 936
MfeI CAATTG 1 cut(s) 417
MhlI GDGCHC 1 cut(s) 845
MluCI AATT 4 cut(s) 62, 98, 417, 464
MlyI GAGTC 2 cut(s) 718, 771
MnlI CCTC 6 cut(s) 16, 607, 646, 689, 736, 960
MroXI GAANNNNTTC 1 cut(s) 55
MseI TTAA 3 cut(s) 183, 456, 804
MslI CAYNNNNRTG 1 cut(s) 879
MspI CCGG 3 cut(s) 389, 488, 924
MspR9I CCNGG 3 cut(s) 488, 834, 854
MunI CAATTG 1 cut(s) 417
MvaI CCWGG 2 cut(s) 834, 854
MwoI GCNNNNNNNGC 1 cut(s) 11
NciI CCSGG 1 cut(s) 488
NdeI CATATG 2 cut(s) 139, 258
NdeII GATC 2 cut(s) 508, 859
NheI GCTAGC 1 cut(s) 292
NlaIII CATG 2 cut(s) 454, 956
NlaIV GGNNCC 2 cut(s) 164, 603
NmuCI GTSAC 1 cut(s) 721
NspI RCATGY 1 cut(s) 454
PagI TCATGA 1 cut(s) 952
PdmI GAANNNNTTC 1 cut(s) 55
PfoI TCCNGGA 1 cut(s) 832
PleI GAGTC 2 cut(s) 718, 771
PpsI GAGTC 2 cut(s) 718, 771
Psp6I CCWGG 2 cut(s) 832, 852
PspFI CCCAGC 1 cut(s) 113
PspGI CCWGG 2 cut(s) 832, 852
PspN4I GGNNCC 2 cut(s) 164, 603
PspPI GGNCC 1 cut(s) 926
PsrI GAACNNNNNNTAC 2 cut(s) 418, 450
PstNI CAGNNNCTG 2 cut(s) 113, 302
RsaI GTAC 3 cut(s) 361, 380, 791
RsaNI GTAC 3 cut(s) 360, 379, 790
RseI CAYNNNNRTG 1 cut(s) 879
SaqAI TTAA 3 cut(s) 183, 456, 804
Sau3AI GATC 2 cut(s) 508, 859
Sau96I GGNCC 1 cut(s) 926
SchI GAGTC 2 cut(s) 718, 771
ScrFI CCNGG 3 cut(s) 488, 834, 854
SduI GDGCHC 1 cut(s) 845
SmiMI CAYNNNNRTG 1 cut(s) 879
Sse9I AATT 4 cut(s) 62, 98, 417, 464
SspI AATATT 1 cut(s) 181
SspMI CTAG 2 cut(s) 293, 357
StyD4I CCNGG 3 cut(s) 486, 832, 852
StyI CCWWGG 1 cut(s) 813
TaaI ACNGT 4 cut(s) 385, 569, 627, 850
TaiI ACGT 1 cut(s) 215
TaqI TCGA 1 cut(s) 936
TaqII GACCGA 1 cut(s) 205
TasI AATT 4 cut(s) 62, 98, 417, 464
TatI WGTACW 2 cut(s) 359, 378
Tru1I TTAA 3 cut(s) 183, 456, 804
Tru9I TTAA 3 cut(s) 183, 456, 804
TscAI CASTG 3 cut(s) 21, 376, 388
TseFI GTSAC 1 cut(s) 721
Tsp45I GTSAC 1 cut(s) 721
TspDTI ATGAA 3 cut(s) 64, 555, 648
TspGWI ACGGA 1 cut(s) 56
TspRI CASTG 3 cut(s) 21, 376, 388
XapI RAATTY 2 cut(s) 62, 464
XceI RCATGY 1 cut(s) 454
XcmI CCANNNNNNNNNTGG 1 cut(s) 853
XmiI GTMKAC 1 cut(s) 334
XmnI GAANNNNTTC 1 cut(s) 55
XspI CTAG 2 cut(s) 293, 357
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.