Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0005011

Physical Location & Seq

Genomic Coordinates Reverse (-)

5916063 .. 5918362

Gene Structure 2300 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G111700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1035 bp

ATGAATTTGGTTGGTTGGAGAATTTTCAAAAACAATAATCCAGTGGCAGACTATCAAATGGCTCGATCTGCATTAGATGAGACCTCACTATCTGGTGCATTTGTGAGAACTGCTTCTGTATTTCGTAACTTCATTTCACGGGACCCAAATTCGCAGTTTCCAGCAGAACCTGGAAGATATCATCTGTATATATCATATGCTTGCCCTTGGGCTTCCAGGTGCCTTGCATACTTGAAAATTAAAGGACTTGAGAAAGCCATCAGCTTTACGTCAGTCAAACCCATATGGGAAAGAACAAAAGAAAGTGATGAGCATATGGGGTGGGTTTTTCCTGCATCTGATACAGAGCTAGCAGGAGCTGAACCTGACCCTTTGAATGGAGCAAAAAGTATTAGAGAACTTTATGAGCTTGCAAGCACCAACTATACTGGAAAGTACACAGTTCCAGTTCTATGGGATAAAAGACTCAAAACAATTGTCAGTAACGAGAGTGCAGAGATTATTCGCATGTTCAATACCGAATTCAATGATATAGCAGAAAACGCAGCTTTGGACTTGTATCCTCCTCACTTGCAATCCCAAATTGATCAGACTAATGAATGGATATATAACAAGATAAATAATGGCGTCTATAAATGTGGGTTTGCAAGGAAGCAAGAGCCTTATGATGAGGCTGTGAAACAATTGTATGAAGCTTTAGACAAATGCGAGGAGATACTGAGCAAGCAACGATACTTGTGTGGGAACACATTGTCTGAAGCAGATATTCGGTTGTTTGTCACTATTATAAGATTTGATGAGGTTTATGCAGTGCATTTCAAGTGCAACAAGAAATTAATACGAGAGTACCCAAATTTGTTTAACTACACCAAAGAAATTTTCCAAGTTCCTGGGATGAGCAGCACCGTCAACATAGATCACATAAAACGACACTATTATGGAAGCCATCCCTCCATCAATCCATTTGGCATAATTCCCAGCGGGCCAGCTATCGACTTTTCTTCTCCTCACGACAGAGACAGGTTTTCTATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GST_C_2 GST_N_2

Protein Analysis

345

Amino Acids

39.55

Weight (kDa)

6.47

Isoelectric Point (pI)

37.51

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005011)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19880 AT4G19880 AT4G19880 AT5G44990 AT5G44990 AT5G44990 AT5G44990 AT5G45020 AT5G45020
fragaria_vesca	FvH4_3g12250 FvH4_3g12250
malus_domestica	MD05G1251900.v1.1 MD05G1252100.v1.1 MD05G1252400.v1.1 MD10G1233200.v1.1 MD10G1233400.v1.1
prunus_persica	Prupe.4G111700_v2.0.a1
pyrus_communis	pycom05g22990 pycom05g23000 pycom05g23030 pycom10g19580
rosa_chinensis	RchiOBHm_Chr5g0020071
rosa_laevigata	RLG00000032495
rosa_roxburghii	Rroxscaffold_1G00058130
rosa_rugosa	Rorug03G0085200 Rorug05G0056600
rosa_samantha	Rh5AG146700 Rh5CG157800 Rh5DG145700
rosa_wichuraiana	Rw5G012960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	788
AccB1I	GGYRCC	1 cut(s)	219
AciI	CCGC	1 cut(s)	981
AcsI	RAATTY	6 cut(s)	4, 21, 148, 521, 853, 876
AcuI	CTGAAG	1 cut(s)	777
AcyI	GRCGYC	1 cut(s)	627
AfaI	GTAC	2 cut(s)	437, 848
AfiI	CCNNNNNNNGG	1 cut(s)	377
AgsI	TTSAA	6 cut(s)	28, 235, 376, 514, 526, 820
AjnI	CCWGG	3 cut(s)	169, 215, 889
AjuI	GAANNNNNNNTTGG	2 cut(s)	863, 895
AluBI	AGCT	7 cut(s)	264, 349, 359, 409, 548, 695, 989
AluI	AGCT	7 cut(s)	264, 349, 359, 409, 548, 695, 989
Alw26I	GTCTC	2 cut(s)	74, 1011
AlwNI	CAGNNNCTG	2 cut(s)	170, 359
AoxI	GGCC	1 cut(s)	983
ApeKI	GCWGC	2 cut(s)	545, 900
ApoI	RAATTY	6 cut(s)	4, 21, 148, 521, 853, 876
ArsI	GACNNNNNNTTYG	2 cut(s)	462, 494
AseI	ATTAAT	1 cut(s)	836
Asp700I	GAANNNNTTC	1 cut(s)	112
AspS9I	GGNCC	2 cut(s)	142, 983
AsuNHI	GCTAGC	1 cut(s)	349
AvaII	GGWCC	1 cut(s)	142
BaeI	ACNNNNGTAYC	4 cut(s)	724, 757, 830, 863
BanI	GGYRCC	1 cut(s)	219
BbvI	GCAGC	2 cut(s)	557, 912
BccI	CCATC	3 cut(s)	266, 954, 962
BciT130I	CCWGG	3 cut(s)	171, 217, 891
BciVI	GTATCC	1 cut(s)	570
BclI	TGATCA	1 cut(s)	586
BcoDI	GTCTC	2 cut(s)	74, 1011
BfaI	CTAG	1 cut(s)	350
BfuI	GTATCC	1 cut(s)	570
BisI	GCNGC	2 cut(s)	546, 901
BlsI	GCNGC	2 cut(s)	547, 902
Bme1390I	CCNGG	3 cut(s)	171, 217, 891
Bme18I	GGWCC	1 cut(s)	142
BmgT120I	GGNCC	2 cut(s)	142, 983
BmiI	GGNNCC	3 cut(s)	143, 144, 221
BmrFI	CCNGG	3 cut(s)	171, 217, 891
BmsI	GCATC	1 cut(s)	344
BmtI	GCTAGC	1 cut(s)	353
BpuEI	CTTGAG	1 cut(s)	269
BsaHI	GRCGYC	1 cut(s)	627
BsaI	GGTCTC	1 cut(s)	74
BsaJI	CCNNGG	2 cut(s)	206, 890
Bsc4I	CCNNNNNNNGG	1 cut(s)	377
Bse1I	ACTGG	3 cut(s)	41, 433, 446
BseBI	CCWGG	3 cut(s)	171, 217, 891
BseDI	CCNNGG	2 cut(s)	206, 890
BseGI	GGATG	2 cut(s)	900, 946
BseLI	CCNNNNNNNGG	1 cut(s)	377
BseMII	CTCAG	1 cut(s)	710
BseNI	ACTGG	3 cut(s)	41, 433, 446
BseRI	GAGGAG	3 cut(s)	555, 725, 996
BseXI	GCAGC	2 cut(s)	557, 912
BseYI	CCCAGC	1 cut(s)	977
BsgI	GTGCAG	1 cut(s)	513
BshFI	GGCC	1 cut(s)	985
BshNI	GGYRCC	1 cut(s)	219
BslFI	GGGAC	1 cut(s)	155
BslI	CCNNNNNNNGG	1 cut(s)	377
BsmAI	GTCTC	2 cut(s)	74, 1011
BsmFI	GGGAC	1 cut(s)	155
BsnI	GGCC	1 cut(s)	985
Bso31I	GGTCTC	1 cut(s)	74
Bsp143I	GATC	3 cut(s)	65, 586, 916
BspACI	CCGC	1 cut(s)	981
BspANI	GGCC	1 cut(s)	985
BspCNI	CTCAG	1 cut(s)	711
BspLI	GGNNCC	3 cut(s)	143, 144, 221
BspOI	GCTAGC	1 cut(s)	353
BspT107I	GGYRCC	1 cut(s)	219
BspTNI	GGTCTC	1 cut(s)	74
BsrI	ACTGG	3 cut(s)	41, 433, 446
BssECI	CCNNGG	2 cut(s)	206, 890
BssMI	GATC	3 cut(s)	65, 586, 916
BssNI	GRCGYC	1 cut(s)	627
BssT1I	CCWWGG	1 cut(s)	206
Bst2UI	CCWGG	3 cut(s)	171, 217, 891
Bst4CI	ACNGT	2 cut(s)	442, 907
BstACI	GRCGYC	1 cut(s)	627
BstC8I	GCNNGC	7 cut(s)	202, 351, 411, 415, 725, 983, 987
BstDEI	CTNAG	1 cut(s)	719
BstF5I	GGATG	2 cut(s)	900, 946
BstKTI	GATC	3 cut(s)	68, 589, 919
BstMAI	GTCTC	2 cut(s)	74, 1011
BstMBI	GATC	3 cut(s)	65, 586, 916
BstMWI	GCNNNNNNNGC	2 cut(s)	68, 542
BstNI	CCWGG	3 cut(s)	171, 217, 891
BstNSI	RCATGY	1 cut(s)	511
BstSCI	CCNGG	3 cut(s)	169, 215, 889
BstV1I	GCAGC	2 cut(s)	557, 912
BstXI	CCANNNNNNTGG	2 cut(s)	453, 890
BsuI	GTATCC	1 cut(s)	570
BsuRI	GGCC	1 cut(s)	985
BtsCI	GGATG	2 cut(s)	900, 946
BtsI	GCAGTG	1 cut(s)	816
BtsIMutI	CAGTG	2 cut(s)	48, 816
Cac8I	GCNNGC	7 cut(s)	202, 351, 411, 415, 725, 983, 987
CaiI	CAGNNNCTG	2 cut(s)	170, 359
Cfr13I	GGNCC	2 cut(s)	142, 983
CseI	GACGC	1 cut(s)	616
Csp6I	GTAC	2 cut(s)	436, 847
CviAII	CATG	1 cut(s)	508
CviQI	GTAC	2 cut(s)	436, 847
DdeI	CTNAG	1 cut(s)	719
DpnI	GATC	3 cut(s)	67, 588, 918
DpnII	GATC	3 cut(s)	65, 586, 916
Eco130I	CCWWGG	1 cut(s)	206
Eco31I	GGTCTC	1 cut(s)	74
Eco32I	GATATC	1 cut(s)	179
Eco47I	GGWCC	1 cut(s)	142
Eco57I	CTGAAG	1 cut(s)	777
EcoO109I	RGGNCCY	1 cut(s)	142
EcoRI	GAATTC	1 cut(s)	521
EcoRII	CCWGG	3 cut(s)	169, 215, 889
EcoRV	GATATC	1 cut(s)	179
EcoT14I	CCWWGG	1 cut(s)	206
ErhI	CCWWGG	1 cut(s)	206
FaeI	CATG	1 cut(s)	511
FaqI	GGGAC	1 cut(s)	155
FatI	CATG	1 cut(s)	507
FauI	CCCGC	1 cut(s)	974
FauNDI	CATATG	3 cut(s)	196, 284, 315
FbaI	TGATCA	1 cut(s)	586
Fnu4HI	GCNGC	2 cut(s)	546, 901
FokI	GGATG	2 cut(s)	907, 933
Fsp4HI	GCNGC	2 cut(s)	546, 901
FspBI	CTAG	1 cut(s)	350
GluI	GCNGC	2 cut(s)	546, 901
GsaI	CCCAGC	1 cut(s)	981
HaeIII	GGCC	1 cut(s)	985
HgaI	GACGC	1 cut(s)	616
Hin1I	GRCGYC	1 cut(s)	627
Hin1II	CATG	1 cut(s)	511
HincII	GTYRAC	1 cut(s)	910
HindII	GTYRAC	1 cut(s)	910
HindIII	AAGCTT	1 cut(s)	693
HinfI	GANTC	1 cut(s)	465
Hpy166II	GTNNAC	2 cut(s)	438, 910
Hpy188I	TCNGA	3 cut(s)	340, 591, 757
Hpy188III	TCNNGA	1 cut(s)	1010
Hpy8I	GTNNAC	2 cut(s)	438, 910
HpyCH4III	ACNGT	2 cut(s)	442, 907
HpyCH4IV	ACGT	1 cut(s)	269
HpyF10VI	GCNNNNNNNGC	2 cut(s)	68, 542
HpyF3I	CTNAG	1 cut(s)	719
HpySE526I	ACGT	1 cut(s)	269
Hsp92I	GRCGYC	1 cut(s)	627
Hsp92II	CATG	1 cut(s)	511
KflI	GGGWCCC	1 cut(s)	142
Ksp22I	TGATCA	1 cut(s)	586
Kzo9I	GATC	3 cut(s)	65, 586, 916
LmnI	GCTCC	2 cut(s)	356, 380
Lsp1109I	GCAGC	2 cut(s)	557, 912
LweI	GCATC	1 cut(s)	344
MaeI	CTAG	1 cut(s)	350
MaeII	ACGT	1 cut(s)	269
MaeIII	GTNAC	3 cut(s)	125, 482, 778
MalI	GATC	3 cut(s)	67, 588, 918
MboI	GATC	3 cut(s)	65, 586, 916
MboII	GAAGA	2 cut(s)	186, 993
MfeI	CAATTG	2 cut(s)	474, 683
MlyI	GAGTC	1 cut(s)	459
MnlI	CCTC	8 cut(s)	94, 573, 576, 664, 703, 793, 961, 1017
MroXI	GAANNNNTTC	1 cut(s)	112
MseI	TTAA	3 cut(s)	240, 836, 861
MslI	CAYNNNNRTG	1 cut(s)	936
MspA1I	CMGCKG	1 cut(s)	981
MspR9I	CCNGG	3 cut(s)	171, 217, 891
MunI	CAATTG	2 cut(s)	474, 683
MvaI	CCWGG	3 cut(s)	171, 217, 891
MwoI	GCNNNNNNNGC	2 cut(s)	68, 542
NdeI	CATATG	3 cut(s)	196, 284, 315
NdeII	GATC	3 cut(s)	65, 586, 916
NheI	GCTAGC	1 cut(s)	349
NlaIII	CATG	1 cut(s)	511
NlaIV	GGNNCC	3 cut(s)	143, 144, 221
NmuCI	GTSAC	1 cut(s)	778
NspI	RCATGY	1 cut(s)	511
PdmI	GAANNNNTTC	1 cut(s)	112
PkrI	GCNGC	2 cut(s)	547, 902
PleI	GAGTC	1 cut(s)	459
PpsI	GAGTC	1 cut(s)	459
PpuMI	RGGWCCY	1 cut(s)	142
PshBI	ATTAAT	1 cut(s)	836
PsiI	TTATAA	1 cut(s)	788
Psp5II	RGGWCCY	1 cut(s)	142
Psp6I	CCWGG	3 cut(s)	169, 215, 889
PspFI	CCCAGC	1 cut(s)	977
PspGI	CCWGG	3 cut(s)	169, 215, 889
PspN4I	GGNNCC	3 cut(s)	143, 144, 221
PspPI	GGNCC	2 cut(s)	142, 983
PspPPI	RGGWCCY	1 cut(s)	142
PstNI	CAGNNNCTG	2 cut(s)	170, 359
RsaI	GTAC	2 cut(s)	437, 848
RsaNI	GTAC	2 cut(s)	436, 847
RseI	CAYNNNNRTG	1 cut(s)	936
SaqAI	TTAA	3 cut(s)	240, 836, 861
SatI	GCNGC	2 cut(s)	546, 901
Sau3AI	GATC	3 cut(s)	65, 586, 916
Sau96I	GGNCC	2 cut(s)	142, 983
SchI	GAGTC	1 cut(s)	459
ScrFI	CCNGG	3 cut(s)	171, 217, 891
SfaNI	GCATC	1 cut(s)	344
SinI	GGWCC	1 cut(s)	142
SmiMI	CAYNNNNRTG	1 cut(s)	936
SmlI	CTYRAG	1 cut(s)	248
SmoI	CTYRAG	1 cut(s)	248
SsiI	CCGC	1 cut(s)	981
SspMI	CTAG	1 cut(s)	350
StyD4I	CCNGG	3 cut(s)	169, 215, 889
StyI	CCWWGG	1 cut(s)	206
TaaI	ACNGT	2 cut(s)	442, 907
TaiI	ACGT	1 cut(s)	272
TaqI	TCGA	2 cut(s)	64, 993
TatI	WGTACW	1 cut(s)	435
Tru1I	TTAA	3 cut(s)	240, 836, 861
Tru9I	TTAA	3 cut(s)	240, 836, 861
TscAI	CASTG	2 cut(s)	48, 816
TseFI	GTSAC	1 cut(s)	778
TseI	GCWGC	2 cut(s)	545, 900
Tsp45I	GTSAC	1 cut(s)	778
TspDTI	ATGAA	4 cut(s)	17, 121, 612, 705
TspRI	CASTG	2 cut(s)	48, 816
VpaK11BI	GGWCC	1 cut(s)	142
VspI	ATTAAT	1 cut(s)	836
XapI	RAATTY	6 cut(s)	4, 21, 148, 521, 853, 876
XceI	RCATGY	1 cut(s)	511
XmnI	GAANNNNTTC	1 cut(s)	112
XspI	CTAG	1 cut(s)	350

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.