No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G46295 |
| fragaria_vesca | FvH4_3g05900 |
| malus_domestica | MD05G1287000.v1.1 |
| prunus_persica | Prupe.4G077900_v2.0.a1 |
| pyrus_communis | pycom05g26540 pycom10g22050 |
| rosa_chinensis | RchiOBHm_Chr5g0013541 RchiOBHm_Chr7g0229651 |
| rosa_laevigata | RLG00000016418 RLG00000032024 |
| rosa_multiflora | Rmu_sc0001516.1_g000040 Rmu_sc0002270.1_g000024 Rmu_sc0005416.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00028650 Rroxscaffold_1G00063030 |
| rosa_rugosa | Rorug01G0129800 Rorug05G0010500 Rorug07G0069200 |
| rosa_samantha | Rh1BG383500 Rh1DG414500 |
| rosa_wichuraiana | Rw5G009170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 4 cut(s) | 5, 104, 155, 210 |
| AcoI | YGGCCR | 1 cut(s) | 101 |
| AgsI | TTSAA | 2 cut(s) | 94, 145 |
| AluBI | AGCT | 1 cut(s) | 118 |
| AluI | AGCT | 1 cut(s) | 118 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 189 |
| AoxI | GGCC | 2 cut(s) | 101, 165 |
| ApeKI | GCWGC | 2 cut(s) | 115, 178 |
| BbvI | GCAGC | 2 cut(s) | 127, 165 |
| BceAI | ACGGC | 1 cut(s) | 152 |
| BfmI | CTRYAG | 1 cut(s) | 113 |
| BisI | GCNGC | 4 cut(s) | 104, 116, 156, 179 |
| BlsI | GCNGC | 4 cut(s) | 105, 117, 157, 180 |
| BmsI | GCATC | 1 cut(s) | 203 |
| BsaJI | CCNNGG | 1 cut(s) | 168 |
| BseDI | CCNNGG | 1 cut(s) | 168 |
| BseGI | GGATG | 2 cut(s) | 48, 218 |
| BseMII | CTCAG | 1 cut(s) | 196 |
| BseX3I | CGGCCG | 1 cut(s) | 101 |
| BseXI | GCAGC | 2 cut(s) | 127, 165 |
| Bsh1285I | CGRYCG | 1 cut(s) | 104 |
| BshFI | GGCC | 2 cut(s) | 103, 167 |
| BsiEI | CGRYCG | 1 cut(s) | 104 |
| BsiSI | CCGG | 1 cut(s) | 100 |
| BsnI | GGCC | 2 cut(s) | 103, 167 |
| Bsp143I | GATC | 1 cut(s) | 147 |
| BspACI | CCGC | 4 cut(s) | 5, 104, 155, 210 |
| BspANI | GGCC | 2 cut(s) | 103, 167 |
| BspCNI | CTCAG | 1 cut(s) | 195 |
| BspMAI | CTGCAG | 1 cut(s) | 117 |
| BssECI | CCNNGG | 1 cut(s) | 168 |
| BssMI | GATC | 1 cut(s) | 147 |
| Bst6I | CTCTTC | 1 cut(s) | 14 |
| BstDEI | CTNAG | 1 cut(s) | 182 |
| BstDSI | CCRYGG | 1 cut(s) | 168 |
| BstF5I | GGATG | 2 cut(s) | 48, 218 |
| BstKTI | GATC | 1 cut(s) | 150 |
| BstMBI | GATC | 1 cut(s) | 147 |
| BstMCI | CGRYCG | 1 cut(s) | 104 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 112, 164 |
| BstSFI | CTRYAG | 1 cut(s) | 113 |
| BstV1I | GCAGC | 2 cut(s) | 127, 165 |
| BstZI | CGGCCG | 1 cut(s) | 101 |
| BsuRI | GGCC | 2 cut(s) | 103, 167 |
| BtgI | CCRYGG | 1 cut(s) | 168 |
| BtsCI | GGATG | 2 cut(s) | 48, 218 |
| CaiI | CAGNNNCTG | 1 cut(s) | 189 |
| CviJI | RGCY | 3 cut(s) | 103, 118, 167 |
| CviKI_1 | RGCY | 3 cut(s) | 103, 118, 167 |
| DdeI | CTNAG | 1 cut(s) | 182 |
| DpnI | GATC | 1 cut(s) | 149 |
| DpnII | GATC | 1 cut(s) | 147 |
| EaeI | YGGCCR | 1 cut(s) | 101 |
| EagI | CGGCCG | 1 cut(s) | 101 |
| Eam1104I | CTCTTC | 1 cut(s) | 14 |
| EarI | CTCTTC | 1 cut(s) | 14 |
| EclXI | CGGCCG | 1 cut(s) | 101 |
| Eco52I | CGGCCG | 1 cut(s) | 101 |
| Fnu4HI | GCNGC | 4 cut(s) | 104, 116, 156, 179 |
| FokI | GGATG | 1 cut(s) | 55 |
| Fsp4HI | GCNGC | 4 cut(s) | 104, 116, 156, 179 |
| GluI | GCNGC | 4 cut(s) | 104, 116, 156, 179 |
| HaeIII | GGCC | 2 cut(s) | 103, 167 |
| HapII | CCGG | 1 cut(s) | 100 |
| HinfI | GANTC | 3 cut(s) | 53, 109, 186 |
| HpaII | CCGG | 1 cut(s) | 100 |
| Hpy188I | TCNGA | 1 cut(s) | 185 |
| Hpy188III | TCNNGA | 1 cut(s) | 145 |
| HpyAV | CCTTC | 1 cut(s) | 100 |
| HpyCH4V | TGCA | 1 cut(s) | 115 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 112, 164 |
| HpyF3I | CTNAG | 1 cut(s) | 182 |
| Kzo9I | GATC | 1 cut(s) | 147 |
| LpnPI | CCDG | 1 cut(s) | 113 |
| Lsp1109I | GCAGC | 2 cut(s) | 127, 165 |
| LweI | GCATC | 1 cut(s) | 203 |
| MalI | GATC | 1 cut(s) | 149 |
| MboI | GATC | 1 cut(s) | 147 |
| MboII | GAAGA | 3 cut(s) | 31, 58, 187 |
| MlyI | GAGTC | 1 cut(s) | 62 |
| MnlI | CCTC | 4 cut(s) | 15, 33, 60, 157 |
| MseI | TTAA | 1 cut(s) | 36 |
| MspA1I | CMGCKG | 1 cut(s) | 106 |
| MspI | CCGG | 1 cut(s) | 100 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 112, 164 |
| NdeII | GATC | 1 cut(s) | 147 |
| PfeI | GAWTC | 2 cut(s) | 109, 186 |
| PkrI | GCNGC | 4 cut(s) | 105, 117, 157, 180 |
| PleI | GAGTC | 1 cut(s) | 61 |
| PpsI | GAGTC | 1 cut(s) | 61 |
| PstI | CTGCAG | 1 cut(s) | 117 |
| PstNI | CAGNNNCTG | 1 cut(s) | 189 |
| SaqAI | TTAA | 1 cut(s) | 36 |
| SatI | GCNGC | 4 cut(s) | 104, 116, 156, 179 |
| Sau3AI | GATC | 1 cut(s) | 147 |
| SchI | GAGTC | 1 cut(s) | 62 |
| SetI | ASST | 3 cut(s) | 26, 71, 120 |
| SfaNI | GCATC | 1 cut(s) | 203 |
| SfcI | CTRYAG | 1 cut(s) | 113 |
| SgeI | CNNG | 9 cut(s) | 18, 69, 106, 112, 157, 163, 175, 181, 214 |
| SsiI | CCGC | 4 cut(s) | 5, 104, 155, 210 |
| TaqI | TCGA | 1 cut(s) | 162 |
| TauI | GCSGC | 2 cut(s) | 106, 158 |
| TfiI | GAWTC | 2 cut(s) | 109, 186 |
| Tru1I | TTAA | 1 cut(s) | 36 |
| Tru9I | TTAA | 1 cut(s) | 36 |
| TseI | GCWGC | 2 cut(s) | 115, 178 |
| TspDTI | ATGAA | 1 cut(s) | 59 |