Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0007796

Physical Location & Seq

Genomic Coordinates Reverse (-)

47366596 .. 47371972

Gene Structure 5377 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1358400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2745 bp

ATGTCCATCACCGGGAGCCCCACCACCAGCAGCACCGTCGATTGCGCTGCCTACCAGCGCAGCGACAGCACTGCCCTTGCTGCCGTCGCCGCCGCGGTGGATCAGTTCCAGCACCGATTGTCCTCCAAGCGCAAACTCGACGACTATGGCGGGCCCACCTTCTCCGACGACGAGGACGACGCCGTTATCTCTGACCTAGTCCACGTCAGGATGAGGAAGGACGAGCCCAACGCTGCCGATTCGTCGTCCAACGGCGCCCCCACCCACCCTCACTCCTCCGCCAATAGTGACGCCCTCAATTCCCGGGTTTCCAACGCCCGACCGACCTCTCACGGCGAGTCTGCTCACTCCGAGTCGACTCGGTCCCGGACAATGCTCCAATTCTTCATCAGAACCATGTCAGGGGGCAATAATTTGGTAATCCAGGCCTATGCTCAGGACAAGGTGAAATCGCTACTCGATCGCATACAAACGATCACCGGCATTCCGGTTTTCGAACTGAGGCTTATATACGGGGGCAAACAGCTGCAGCCAGAGCAGTCGCTGGCCGAGTGCGCCATACAAAACGACGCCAGTTTGCAACTGGTCGGCCGCTTGCGGAGCACCGATCACCCTCAGGCCTGGCAACTCCTGGAGGACATAGTCTCCGCCGCATTTCGAATGTGCCAAGGCGAAGAGATTCACGAGCCTTCGAAATACATCAAGAGCAGGATGAGCCAGTACTTGACCATGGCTCAGAAGGAGACAACAGCCGGATATGGGGTTAGCCATATCCGGGTGTTTGTTCCGTCCTCGGCCCCCTTGGCGCTGCTGATGCTCTATGTTTCTCCCCTGCCAGCTAACAGAACAGTTGCTGAAAATTCAATCAAGTATTTCCTGAATTCGTACCCTACATTGTTGCCGAAACACTTGCATAATTACTGCGCGCCGATAGTGTTAGAGTTTTGTAAGTTTCTTAGGAGATTAGGGGAGGAGGACCCTCTGTACGTCCTATGCCGAGGTTCACTCGGTTCCTTGTTGGAAAGTGATGGAAATTCTCAGGACTCAGAACCTGTGGAGGGACTGATTGGTGGGTTGAAAGATATTTCTCCATTTGTTAGGGAGCTGTCAAGTATTTTGTCTAGGGATTTGGTAGTCAGTATGGACCTTCCTGCGAGTGGCAGGCCGTTGTCGGATGATGTACGTGATTTTAGAGCGTTCTTGCTCCCTTTGCGCACTGCAGTTGCCGATCAAGTGTGTTTCAAGGGTTCTATTTCTGCAACCTTGAAAGGGAGGACTTTTAGGCATCCCCTGTATGGAGAGGAGATTAAGCTTCTTCACGATATATATGCTGATTTGCTAAATAAAATGGATGAATGCCTTGGAAAAATGGGAAAGGTGGAGGGTGATTTTGCTCATTCTGGATGGTCTCAGTATCTTGCTGTTTTAAAGGAATTGAGTGGAATTTCTATGCTTTACCAGAGCTGGGAAGAACAATTTAAGACTATTTTGAGGCTTAGAAGGGCTCCATTATGTGCTCTAATTGTCAAGTATGCAATGCGAAGTGACGATCATCAGTGGCTTATTAAGCACAAAGATGTGCTAGATTTTGAGTCTCGGAGGCACTTGGCTATGATGATGTTCCCTGATGTTAAAGAAGACTATGAGGAGCTGCATGAGATGCTCATTGATAGGTCTCAAATATTGGCAGAATCCTTTGAGTACATAGGGCATGCGGAACCTGAGTCACTTCATGGCGGTTTATTTATGGAATTCAAAAATGAGGAAGCTACAGGTCCAGGTGTACTGCGGGAGTGGTTCTTTTTGGTATGCCAGGCCATATTTAATCCCCAAAATGCACTTTTTGTGGCATGCCCTAACGACCGTAGAAGGTTCTATCCTAATCCAGCATCTAAGGTTGATCCTCTGCACCTGGAGTATTTCACCTTTGCTGGCCGAGTGATTGCATTGGCTTTGATGCATAAAGTGCACGTGGGCATAGTCTTTGATCGTGTGTTTTTCCAGCAACTGGCTGGAGATATATATTTATCTTTGGAAGATATAAGAGATGCAGATCCATTCTTGTATAATAGTTGCAAGCAGATATTAGAAATGGATGCCCATTTTATTGATTCAGATGCTTTAGGGTTGACATTTGTTAGGGAAGTGGAGGAGTTAGGATTCAGGAAAACTGTGGAGCTTTGCCCTGGTGGGAAAAGCATTGTTGTGAACAGCAAGAACAGGGGGGAATATGTTAATCTGCTAATTCAGCATCGTTTTGTCACATCAATATCTGAACAGGTGTCCCAATTTGCGCATGGATTTTCTGATATACTCTGTGGATCAAGGCTCCAGAGTGTGTTTTTCCGAAGTTTAGAGCTAGAAGATCTTGATTGGATGCTTCACGGAAGTGAAAGTGCTATTAGCGTTGAAGATTGGAAGGCACATACTGATTACAATGGCTATAAAGAGACTGATCCTCATATACTTTGGTTCTGGAAGATTGTTGGGGAGATGTCTGCAGAGCAGAAAAAGGTTCTTCTCTTCTTTTGGACCTCGGTGAAGTATCTTCCAGTCGAGGGGTTCCGAGGTTTGGCTTCTCGGCTTTACATTTACAAGTCCTCAGAGGCTTACAGTCGCCTGCCTTCGTCTCATACATGCTTTTACAGATTGTGTTTCCCTCCATATCCATCGAAGGCAGTGATGAAAGGCCGCCTTAATATCATCACCCAGGAACATGTCGGCAGTAGCTTCGGGACATGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0006950 GO:0006979 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0009636 GO:0009719 GO:0009725 GO:0009753 GO:0009987 GO:0010033 GO:0010035 GO:0010150 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0032501 GO:0032502 GO:0036211 GO:0042221 GO:0042493 GO:0042542 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046677 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0090693 GO:0099402 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04011 ko04120 ko04144 ko04530 ko05169 map04011 map04120 map04144 map04530 map05169

Pfam Domains

Protein Families

HECT ubiquitin

Protein Analysis

915

Amino Acids

103.17

Weight (kDa)

5.93

Isoelectric Point (pI)

47.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ubiquitin	PF00240	129 - 200	1.4e-13	Ubiquitin family
HECT	PF00632	602 - 906	5e-77	HECT-domain (ubiquitin-transferase)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007796)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12570
fragaria_vesca	FvH4_3g00910 FvH4_3g00910
malus_domestica	MD05G1358400.v1.1 MD10G1332500.v1.1
prunus_persica	Prupe.4G009700_v2.0.a1 Prupe.4G009700_v2.0.a1
pyrus_communis	pycom05g32410 pycom10g28190
rosa_chinensis	RchiOBHm_Chr5g0001411 RchiOBHm_Chr5g0001431
rosa_laevigata	RLG00000030927
rosa_multiflora	Rmu_sc0003749.1_g000014
rosa_roxburghii	Rroxscaffold_1G00074960 Rroxscaffold_1G00074970
rosa_rugosa	Rorug04G0390300
rosa_samantha	Rh5AG010900 Rh5AG011000 Rh5BG013500 Rh5CG011900 Rh5CG012000 Rh5DG011200 Rh7AG192400
rosa_wichuraiana	Rw5G001040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	1214, 2295
AccB1I	GGYRCC	1 cut(s)	254
AccB7I	CCANNNNNTGG	1 cut(s)	2008
AccI	GTMKAC	1 cut(s)	356
AccII	CGCG	2 cut(s)	95, 926
AclWI	GGATC	5 cut(s)	108, 1895, 2048, 2329, 2450
AcoI	YGGCCR	3 cut(s)	546, 589, 1933
AcsI	RAATTY	5 cut(s)	859, 880, 1033, 1443, 1751
AcvI	CACGTG	1 cut(s)	1972
AcyI	GRCGYC	4 cut(s)	180, 255, 291, 570
AfaI	GTAC	6 cut(s)	722, 887, 986, 1182, 1703, 1785
AflIII	ACRYGT	1 cut(s)	2716
AgsI	TTSAA	6 cut(s)	864, 1078, 1243, 1267, 1756, 2411
AjiI	CACGTC	1 cut(s)	205
AjnI	CCWGG	8 cut(s)	423, 620, 630, 1777, 1812, 1911, 2185, 2709
AleI	CACNNNNGTG	1 cut(s)	2388
Alw21I	GWGCWC	3 cut(s)	605, 1519, 1971
Alw26I	GTCTC	7 cut(s)	649, 737, 1413, 1599, 1680, 2444, 2634
Alw44I	GTGCAC	1 cut(s)	1967
AlwI	GGATC	5 cut(s)	108, 1895, 2048, 2329, 2450
AlwNI	CAGNNNCTG	4 cut(s)	544, 854, 1052, 2008
Ama87I	CYCGRG	1 cut(s)	303
ApaI	GGGCCC	1 cut(s)	156
ApaLI	GTGCAC	1 cut(s)	1967
ApeKI	GCWGC	9 cut(s)	30, 47, 60, 80, 233, 526, 529, 808, 1651
ApoI	RAATTY	5 cut(s)	859, 880, 1033, 1443, 1751
Asp700I	GAANNNNTTC	1 cut(s)	678
AspS9I	GGNCC	8 cut(s)	152, 153, 363, 796, 976, 1144, 1775, 2532
AsuC2I	CCSGG	5 cut(s)	13, 304, 305, 367, 776
AsuHPI	GGTGA	7 cut(s)	457, 469, 602, 1397, 1915, 2551, 2698
AsuII	TTCGAA	3 cut(s)	495, 658, 692
AvaI	CYCGRG	1 cut(s)	303
AvaII	GGWCC	5 cut(s)	363, 976, 1144, 1775, 2532
AxyI	CCTNAGG	1 cut(s)	615
BaeGI	GKGCMC	2 cut(s)	156, 1971
BanI	GGYRCC	1 cut(s)	254
BanII	GRGCYC	4 cut(s)	20, 156, 228, 1507
BauI	CACGAG	1 cut(s)	683
BbrPI	CACGTG	1 cut(s)	1972
BbsI	GAAGAC	1 cut(s)	1644
Bbv12I	GWGCWC	3 cut(s)	605, 1519, 1971
BbvI	GCAGC	9 cut(s)	34, 42, 67, 72, 220, 513, 541, 795, 1638
BccI	CCATC	4 cut(s)	14, 1022, 1398, 2677
BceAI	ACGGC	5 cut(s)	68, 167, 268, 349, 1150
BciT130I	CCWGG	8 cut(s)	425, 622, 632, 1779, 1814, 1913, 2187, 2711
BcnI	CCSGG	5 cut(s)	13, 304, 305, 367, 776
BcoDI	GTCTC	7 cut(s)	649, 737, 1413, 1599, 1680, 2444, 2634
BfaI	CTAG	4 cut(s)	197, 1122, 1583, 2360
BfmI	CTRYAG	4 cut(s)	527, 1218, 1770, 2499
BfoI	RGCGCY	2 cut(s)	258, 809
BglI	GCCNNNNNGGC	1 cut(s)	803
BglII	AGATCT	1 cut(s)	2365
BmcAI	AGTACT	1 cut(s)	722
Bme18I	GGWCC	5 cut(s)	363, 976, 1144, 1775, 2532
BmeT110I	CYCGRG	1 cut(s)	303
BmgBI	CACGTC	1 cut(s)	205
BmgT120I	GGNCC	8 cut(s)	152, 153, 363, 796, 976, 1144, 1775, 2532
BpiI	GAAGAC	1 cut(s)	1644
BplI	GAGNNNNNCTC	2 cut(s)	990, 1022
BpmI	CTGGAG	4 cut(s)	653, 1934, 2034, 2315
Bpu10I	CCTNAGC	1 cut(s)	435
Bpu14I	TTCGAA	3 cut(s)	495, 658, 692
BpuMI	CCSGG	5 cut(s)	13, 304, 305, 367, 776
BsaAI	YACGTR	2 cut(s)	1184, 1972
BsaBI	GATNNNNATC	1 cut(s)	2052
BsaHI	GRCGYC	4 cut(s)	180, 255, 291, 570
BsaI	GGTCTC	2 cut(s)	1413, 1680
BsaWI	WCCGGW	1 cut(s)	487
BsaXI	ACNNNNNCTCC	4 cut(s)	257, 287, 629, 659
Bse118I	RCCGGY	1 cut(s)	479
Bse1I	ACTGG	5 cut(s)	573, 588, 718, 2013, 2552
Bse21I	CCTNAGG	1 cut(s)	615
Bse3DI	GCAATG	1 cut(s)	1542
Bse8I	GATNNNNATC	1 cut(s)	2052
BseBI	CCWGG	8 cut(s)	425, 622, 632, 1779, 1814, 1913, 2187, 2711
BseGI	GGATG	8 cut(s)	216, 717, 1180, 1285, 1357, 1409, 2101, 2382
BseJI	GATNNNNATC	1 cut(s)	2052
BseMI	GCAATG	1 cut(s)	1542
BseMII	CTCAG	9 cut(s)	449, 491, 629, 749, 1052, 1059, 1424, 1713, 2616
BseNI	ACTGG	5 cut(s)	573, 588, 718, 2013, 2552
BsePI	GCGCGC	1 cut(s)	924
BseRI	GAGGAG	5 cut(s)	265, 986, 1316, 1661, 2165
BseSI	GKGCMC	2 cut(s)	156, 1971
BseX3I	CGGCCG	1 cut(s)	589
BseXI	GCAGC	9 cut(s)	34, 42, 67, 72, 220, 513, 541, 795, 1638
BseYI	CCCAGC	1 cut(s)	1464
BsgI	GTGCAG	1 cut(s)	1892
Bsh1236I	CGCG	2 cut(s)	95, 926
Bsh1285I	CGRYCG	4 cut(s)	323, 463, 592, 1864
BshNI	GGYRCC	1 cut(s)	254
BsiEI	CGRYCG	4 cut(s)	323, 463, 592, 1864
BsiHKAI	GWGCWC	3 cut(s)	605, 1519, 1971
BsiHKCI	CYCGRG	1 cut(s)	303
BsiSI	CCGG	7 cut(s)	12, 304, 367, 480, 488, 753, 775
BslFI	GGGAC	3 cut(s)	349, 1074, 2269
BsmAI	GTCTC	7 cut(s)	649, 737, 1413, 1599, 1680, 2444, 2634
BsmBI	CGTCTC	1 cut(s)	2634
BsmFI	GGGAC	3 cut(s)	349, 1074, 2269
BsmI	GAATGC	2 cut(s)	483, 1361
Bso31I	GGTCTC	2 cut(s)	1413, 1680
BsoBI	CYCGRG	1 cut(s)	303
Bsp119I	TTCGAA	3 cut(s)	495, 658, 692
Bsp120I	GGGCCC	1 cut(s)	152
Bsp1286I	GDGCHC	7 cut(s)	20, 156, 228, 605, 1507, 1519, 1971
Bsp19I	CCATGG	1 cut(s)	729
BspCNI	CTCAG	9 cut(s)	448, 492, 628, 748, 1051, 1058, 1423, 1714, 2615
BspFNI	CGCG	2 cut(s)	95, 926
BspMAI	CTGCAG	3 cut(s)	531, 1222, 2503
BspPI	GGATC	5 cut(s)	108, 1895, 2048, 2329, 2450
BspT104I	TTCGAA	3 cut(s)	495, 658, 692
BspT107I	GGYRCC	1 cut(s)	254
BspTNI	GGTCTC	2 cut(s)	1413, 1680
BsrDI	GCAATG	1 cut(s)	1542
BsrFI	RCCGGY	1 cut(s)	479
BsrI	ACTGG	5 cut(s)	573, 588, 718, 2013, 2552
BssAI	RCCGGY	1 cut(s)	479
BssHII	GCGCGC	1 cut(s)	924
BssNI	GRCGYC	4 cut(s)	180, 255, 291, 570
BssSI	CACGAG	1 cut(s)	683
BssT1I	CCWWGG	4 cut(s)	667, 729, 801, 1360
Bst2BI	CACGAG	1 cut(s)	683
Bst2UI	CCWGG	8 cut(s)	425, 622, 632, 1779, 1814, 1913, 2187, 2711
Bst4CI	ACNGT	5 cut(s)	37, 850, 1865, 2173, 2615
Bst6I	CTCTTC	2 cut(s)	669, 2528
BstACI	GRCGYC	4 cut(s)	180, 255, 291, 570
BstAPI	GCANNNNNTGC	2 cut(s)	1660, 1966
BstBAI	YACGTR	2 cut(s)	1184, 1972
BstBI	TTCGAA	3 cut(s)	495, 658, 692
BstDSI	CCRYGG	2 cut(s)	93, 729
BstF5I	GGATG	8 cut(s)	216, 717, 1180, 1285, 1357, 1409, 2101, 2382
BstFNI	CGCG	2 cut(s)	95, 926
BstH2I	RGCGCY	2 cut(s)	258, 809
BstMAI	GTCTC	7 cut(s)	649, 737, 1413, 1599, 1680, 2444, 2634
BstMCI	CGRYCG	4 cut(s)	323, 463, 592, 1864
BstNI	CCWGG	8 cut(s)	425, 622, 632, 1779, 1814, 1913, 2187, 2711
BstNSI	RCATGY	4 cut(s)	1715, 1854, 2640, 2720
BstSFI	CTRYAG	4 cut(s)	527, 1218, 1770, 2499
BstSLI	GKGCMC	2 cut(s)	156, 1971
BstUI	CGCG	2 cut(s)	95, 926
BstV1I	GCAGC	9 cut(s)	34, 42, 67, 72, 220, 513, 541, 795, 1638
BstV2I	GAAGAC	1 cut(s)	1644
BstX2I	RGATCY	2 cut(s)	2053, 2365
BstYI	RGATCY	2 cut(s)	2053, 2365
BstZI	CGGCCG	1 cut(s)	589
Bsu36I	CCTNAGG	1 cut(s)	615
BtgI	CCRYGG	2 cut(s)	93, 729
BtrI	CACGTC	1 cut(s)	205
BtsCI	GGATG	8 cut(s)	216, 717, 1180, 1285, 1357, 1409, 2101, 2382
BtsI	GCAGTG	3 cut(s)	69, 1215, 2685
BtsIMutI	CAGTG	4 cut(s)	69, 1215, 1562, 2685
CaiI	CAGNNNCTG	4 cut(s)	544, 854, 1052, 2008
Cfr10I	RCCGGY	1 cut(s)	479
Cfr13I	GGNCC	8 cut(s)	152, 153, 363, 796, 976, 1144, 1775, 2532
Cfr42I	CCGCGG	1 cut(s)	96
Cfr9I	CCCGGG	1 cut(s)	303
CseI	GACGC	3 cut(s)	188, 299, 578
Csp6I	GTAC	6 cut(s)	721, 886, 985, 1181, 1702, 1784
CviQI	GTAC	6 cut(s)	721, 886, 985, 1181, 1702, 1784
DinI	GGCGCC	1 cut(s)	256
DraI	TTTAAA	1 cut(s)	1428
EaeI	YGGCCR	3 cut(s)	546, 589, 1933
EagI	CGGCCG	1 cut(s)	589
Eam1104I	CTCTTC	2 cut(s)	669, 2528
EarI	CTCTTC	2 cut(s)	669, 2528
EciI	GGCGGA	2 cut(s)	268, 637
EclXI	CGGCCG	1 cut(s)	589
Eco130I	CCWWGG	4 cut(s)	667, 729, 801, 1360
Eco147I	AGGCCT	2 cut(s)	428, 620
Eco24I	GRGCYC	4 cut(s)	20, 156, 228, 1507
Eco31I	GGTCTC	2 cut(s)	1413, 1680
Eco47I	GGWCC	5 cut(s)	363, 976, 1144, 1775, 2532
Eco52I	CGGCCG	1 cut(s)	589
Eco72I	CACGTG	1 cut(s)	1972
Eco81I	CCTNAGG	1 cut(s)	615
Eco88I	CYCGRG	1 cut(s)	303
EcoO109I	RGGNCCY	1 cut(s)	976
EcoRI	GAATTC	2 cut(s)	880, 1751
EcoRII	CCWGG	8 cut(s)	423, 620, 630, 1777, 1812, 1911, 2185, 2709
EcoT14I	CCWWGG	4 cut(s)	667, 729, 801, 1360
EcoT22I	ATGCAT	1 cut(s)	1962
EcoT38I	GRGCYC	4 cut(s)	20, 156, 228, 1507
EgeI	GGCGCC	1 cut(s)	256
EheI	GGCGCC	1 cut(s)	256
ErhI	CCWWGG	4 cut(s)	667, 729, 801, 1360
Esp3I	CGTCTC	1 cut(s)	2634
FalI	AAGNNNNNCTT	2 cut(s)	2679, 2711
FaqI	GGGAC	3 cut(s)	349, 1074, 2269
FauI	CCCGC	2 cut(s)	143, 1782
FblI	GTMKAC	1 cut(s)	356
FokI	GGATG	8 cut(s)	223, 724, 1187, 1272, 1364, 1416, 2108, 2389
FriOI	GRGCYC	4 cut(s)	20, 156, 228, 1507
FspBI	CTAG	4 cut(s)	197, 1122, 1583, 2360
FspI	TGCGCA	2 cut(s)	1214, 2295
GsaI	CCCAGC	1 cut(s)	1468
GsuI	CTGGAG	4 cut(s)	653, 1934, 2034, 2315
HaeII	RGCGCY	2 cut(s)	258, 809
HapII	CCGG	7 cut(s)	12, 304, 367, 480, 488, 753, 775
HgaI	GACGC	3 cut(s)	188, 299, 578
Hin1I	GRCGYC	4 cut(s)	180, 255, 291, 570
HincII	GTYRAC	2 cut(s)	357, 2130
HindII	GTYRAC	2 cut(s)	357, 2130
HindIII	AAGCTT	1 cut(s)	1310
HpaII	CCGG	7 cut(s)	12, 304, 367, 480, 488, 753, 775
HphI	GGTGA	7 cut(s)	457, 469, 602, 1397, 1915, 2551, 2698
Hpy166II	GTNNAC	7 cut(s)	202, 357, 1004, 1784, 1969, 2130, 2209
Hpy8I	GTNNAC	7 cut(s)	202, 357, 1004, 1784, 1969, 2130, 2209
Hpy99I	CGWCG	8 cut(s)	41, 89, 143, 170, 173, 182, 247, 572
HpyCH4III	ACNGT	5 cut(s)	37, 850, 1865, 2173, 2615
HpyCH4IV	ACGT	4 cut(s)	204, 987, 1183, 1971
HpySE526I	ACGT	4 cut(s)	204, 987, 1183, 1971
Hsp92I	GRCGYC	4 cut(s)	180, 255, 291, 570
KasI	GGCGCC	1 cut(s)	254
KspI	CCGCGG	1 cut(s)	96
LmnI	GCTCC	9 cut(s)	15, 381, 600, 1102, 1209, 1510, 1648, 2176, 2334
Lsp1109I	GCAGC	9 cut(s)	34, 42, 67, 72, 220, 513, 541, 795, 1638
MaeI	CTAG	4 cut(s)	197, 1122, 1583, 2360
MaeII	ACGT	4 cut(s)	204, 987, 1183, 1971
MaeIII	GTNAC	4 cut(s)	287, 1544, 1725, 2260
MflI	RGATCY	2 cut(s)	2053, 2365
MhlI	GDGCHC	7 cut(s)	20, 156, 228, 605, 1507, 1519, 1971
Mly113I	GGCGCC	1 cut(s)	255
MlyI	GAGTC	6 cut(s)	347, 352, 362, 1037, 1601, 1733
MmeI	TCCRAC	5 cut(s)	189, 273, 336, 999, 1152
Mph1103I	ATGCAT	1 cut(s)	1962
MroXI	GAANNNNTTC	1 cut(s)	678
MseI	TTAA	8 cut(s)	1308, 1427, 1479, 1566, 1632, 1824, 2235, 2697
MslI	CAYNNNNRTG	3 cut(s)	1575, 2204, 2388
MspA1I	CMGCKG	2 cut(s)	95, 526
MspI	CCGG	7 cut(s)	12, 304, 367, 480, 488, 753, 775
Mva1269I	GAATGC	2 cut(s)	483, 1361
MvaI	CCWGG	8 cut(s)	425, 622, 632, 1779, 1814, 1913, 2187, 2711
MvnI	CGCG	2 cut(s)	95, 926
NarI	GGCGCC	1 cut(s)	255
NciI	CCSGG	5 cut(s)	13, 304, 305, 367, 776
NcoI	CCATGG	1 cut(s)	729
NmeAIII	GCCGAG	5 cut(s)	574, 773, 1022, 1961, 2560
NmuCI	GTSAC	4 cut(s)	287, 1544, 1725, 2260
NsbI	TGCGCA	2 cut(s)	1214, 2295
NsiI	ATGCAT	1 cut(s)	1962
NspI	RCATGY	4 cut(s)	1715, 1854, 2640, 2720
NspV	TTCGAA	3 cut(s)	495, 658, 692
OliI	CACNNNNGTG	1 cut(s)	2388
PaeI	GCATGC	2 cut(s)	1715, 1854
PauI	GCGCGC	1 cut(s)	924
PceI	AGGCCT	2 cut(s)	428, 620
PciI	ACATGT	1 cut(s)	2716
PcsI	WCGNNNNNNNCGW	1 cut(s)	174
PctI	GAATGC	2 cut(s)	483, 1361
PdmI	GAANNNNTTC	1 cut(s)	678
PfeI	GAWTC	5 cut(s)	239, 679, 1691, 2111, 2160
PflFI	GACNNNGTC	3 cut(s)	197, 361, 641
PflMI	CCANNNNNTGG	1 cut(s)	2008
PfoI	TCCNGGA	2 cut(s)	365, 630
Ple19I	CGATCG	1 cut(s)	463
PleI	GAGTC	6 cut(s)	346, 352, 361, 1037, 1600, 1732
PluTI	GGCGCC	1 cut(s)	258
PmaCI	CACGTG	1 cut(s)	1972
PmlI	CACGTG	1 cut(s)	1972
PpsI	GAGTC	6 cut(s)	346, 352, 361, 1037, 1600, 1732
Ppu21I	YACGTR	2 cut(s)	1184, 1972
PpuMI	RGGWCCY	1 cut(s)	976
PscI	ACATGT	1 cut(s)	2716
Psp5II	RGGWCCY	1 cut(s)	976
Psp6I	CCWGG	8 cut(s)	423, 620, 630, 1777, 1812, 1911, 2185, 2709
PspCI	CACGTG	1 cut(s)	1972
PspFI	CCCAGC	1 cut(s)	1464
PspGI	CCWGG	8 cut(s)	423, 620, 630, 1777, 1812, 1911, 2185, 2709
PspOMI	GGGCCC	1 cut(s)	152
PspPI	GGNCC	8 cut(s)	152, 153, 363, 796, 976, 1144, 1775, 2532
PspPPI	RGGWCCY	1 cut(s)	976
PstI	CTGCAG	3 cut(s)	531, 1222, 2503
PstNI	CAGNNNCTG	4 cut(s)	544, 854, 1052, 2008
PsuI	RGATCY	2 cut(s)	2053, 2365
PsyI	GACNNNGTC	3 cut(s)	197, 361, 641
PteI	GCGCGC	1 cut(s)	924
PvuI	CGATCG	1 cut(s)	463
PvuII	CAGCTG	1 cut(s)	526
RsaI	GTAC	6 cut(s)	722, 887, 986, 1182, 1703, 1785
RsaNI	GTAC	6 cut(s)	721, 886, 985, 1181, 1702, 1784
RseI	CAYNNNNRTG	3 cut(s)	1575, 2204, 2388
SacII	CCGCGG	1 cut(s)	96
SalI	GTCGAC	1 cut(s)	355
SaqAI	TTAA	8 cut(s)	1308, 1427, 1479, 1566, 1632, 1824, 2235, 2697
Sau96I	GGNCC	8 cut(s)	152, 153, 363, 796, 976, 1144, 1775, 2532
ScaI	AGTACT	1 cut(s)	722
SchI	GAGTC	6 cut(s)	347, 352, 362, 1037, 1601, 1733
SduI	GDGCHC	7 cut(s)	20, 156, 228, 605, 1507, 1519, 1971
SfcI	CTRYAG	4 cut(s)	527, 1218, 1770, 2499
SfoI	GGCGCC	1 cut(s)	256
Sfr303I	CCGCGG	1 cut(s)	96
SfuI	TTCGAA	3 cut(s)	495, 658, 692
SgrBI	CCGCGG	1 cut(s)	96
SinI	GGWCC	5 cut(s)	363, 976, 1144, 1775, 2532
SmaI	CCCGGG	1 cut(s)	305
SmiMI	CAYNNNNRTG	3 cut(s)	1575, 2204, 2388
SphI	GCATGC	2 cut(s)	1715, 1854
SseBI	AGGCCT	2 cut(s)	428, 620
SspDI	GGCGCC	1 cut(s)	254
SspI	AATATT	1 cut(s)	1683
SspMI	CTAG	4 cut(s)	197, 1122, 1583, 2360
StuI	AGGCCT	2 cut(s)	428, 620
StyI	CCWWGG	4 cut(s)	667, 729, 801, 1360
TaaI	ACNGT	5 cut(s)	37, 850, 1865, 2173, 2615
TaiI	ACGT	4 cut(s)	207, 990, 1186, 1974
TaqI	TCGA	9 cut(s)	39, 138, 356, 459, 495, 658, 692, 2556, 2672
TaqII	GACCGA	2 cut(s)	337, 351
TatI	WGTACW	3 cut(s)	720, 1701, 1783
TauI	GCSGC	5 cut(s)	92, 95, 594, 653, 2694
TfiI	GAWTC	5 cut(s)	239, 679, 1691, 2111, 2160
Tru1I	TTAA	8 cut(s)	1308, 1427, 1479, 1566, 1632, 1824, 2235, 2697
Tru9I	TTAA	8 cut(s)	1308, 1427, 1479, 1566, 1632, 1824, 2235, 2697
TscAI	CASTG	4 cut(s)	76, 1222, 1562, 2685
TseFI	GTSAC	4 cut(s)	287, 1544, 1725, 2260
TseI	GCWGC	9 cut(s)	30, 47, 60, 80, 233, 526, 529, 808, 1651
Tsp45I	GTSAC	4 cut(s)	287, 1544, 1725, 2260
TspDTI	ATGAA	4 cut(s)	376, 1368, 1721, 2699
TspGWI	ACGGA	2 cut(s)	777, 2400
TspMI	CCCGGG	1 cut(s)	303
TspRI	CASTG	4 cut(s)	76, 1222, 1562, 2685
Tth111I	GACNNNGTC	3 cut(s)	197, 361, 641
Van91I	CCANNNNNTGG	1 cut(s)	2008
VneI	GTGCAC	1 cut(s)	1967
VpaK11BI	GGWCC	5 cut(s)	363, 976, 1144, 1775, 2532
XapI	RAATTY	5 cut(s)	859, 880, 1033, 1443, 1751
XceI	RCATGY	4 cut(s)	1715, 1854, 2640, 2720
XcmI	CCANNNNNNNNNTGG	3 cut(s)	580, 2009, 2294
XmaI	CCCGGG	1 cut(s)	303
XmiI	GTMKAC	1 cut(s)	356
XmnI	GAANNNNTTC	1 cut(s)	678
XspI	CTAG	4 cut(s)	197, 1122, 1583, 2360
ZrmI	AGTACT	1 cut(s)	722
Zsp2I	ATGCAT	1 cut(s)	1962

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.