Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0007796

Physical Location & Seq

Genomic Coordinates Reverse (-)

31819966 .. 31826311

Gene Structure 6346 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g32410.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2757 bp

ATGTCCATCACCGGGAGCCCCACCAGCAGCAGCACCGTCGATTGCGCTGCCTACCAGCGCAGCGACAGCACTGCCGTCGCCGCCGCGGTGGATCAGTTCCACCACCGATTGTCCTCCAAGCGCAAACTCGACGACTATGGCGGGCCCACCTTCTCCGACGACGAGGACGACGCTGTTATCTCTGGCCTAGTCCACGTCAGGATGAGGAAGGACGAGCCCAACGCTGCCGATTCGTCGTCCAACGGCGCCCCCACCCACCCTCACTCCTCCACCAATAGTGACGCCCTCAATTCCCGGGTTTCCAATGCCCGACCGACCTCTCACGGCGAGTCTGCTCTGTCTGAGTCGACTCGGTCCCGGACAATGCTCCAATTCTTCATCAGAACCATGTCAGGGGGCAATAATTTGGTAATCCAGGCCTATGCTCAGGACAAGGTGAAATCGCTACTCGATCGCATCCAAACGATCACCGGCATTCCGGTTTTCGAACAGAGGCTTATATACGGTGGCAAACAGCTGCAGCCGGAGCAGTCGTTGGCCGAGTGCGCCATACAAAACGACGCCAGTTTGCAACTGGTCGGCCGCTTGCGGAGCACCGATCACCCTCAGGCCTGGCAACTCCTGGAGGACATAGTCTCCGCCGCATTTCGAATGTGCCGAGGCGAAGAGATTCATGAGCCGTCGAAATACATCAAGAGCAGGATGAGCCAATACTTGACCATGGCTCAGAAGGAGACGACAGCCGGATATGGGGTTAGCCATATCCGGGTCTTTGTTCCGTCCTCGGCCCCCTTGGCGCTGTTGATGCTCTATGTTTCTCCCCTGCCAGCTAACAGAACAGTTGCTGAAAATTCAATCAAGTATTTCCTGAATTCGTACCCTACATTGTTGCCGAAACACTTGCATAATTACTGCGCGCCAATAGTATTAGAGTTTTGTAAGTTTCTTAGGAGATTAGGGGAGGAGGACCCTCTGTACGTCCTATGCCGAGGTTCACTCGGTTCCTTGTTGGAAAGTGATGGAAATTCTCAGGACTCAGAACCTGTGGAGGGACTGATTGGTGGGTTGAAAGAGATTTCTCCATTTGTTAGGGAGCTGTCAAGTATTTTGTCTAGGGATTTGGTAGTCAGTATGGACCTTCCTGCGAGTGGCAGGCCGTTGTCGGATGATGTACGTGATTTTAGAGCGTTCTTGCTCCCTTTGCGCACTGCAGTTGCGGATCAAGTGTGTTTCAAGGGTTCTATTTCTGCAGCCTTGAAGGGGAGGACTTTTAGGCATCCCCTGTATGGAGAGGAGATTGAGCTTCTTCACGTTATATATGCTGATTTGCTAAATAAAATGGATGAATGCCTTGGAAAAATGGGAGAGTCTTTGGCTGGGAAAGGAAAGGTGGAGGGTGATTTTGCTCATTCTGGATGGTCTCAGTATCTTGCTGTTTTAAAGGAATTGAGTGGAATTTCTATGCTTTACCAGAGCTGGGAAGAACAATTTAAGACTATTTTGAGGCTTAGAAGGGCTCCATTATGTGCTCTAGTTGTCAAGTATGCAACGCGAAGTGATGATCATCAGTGGCTTATTAAGCACAAAGATGTTCTAGATTTTGAGTCTCGGAGGCACTTGGCTATGATGATGTTCCCTGATGTTAAAGAAGACTATGAGGAGCTGCATGAGATGCTCATTGATAGGTCTCAAATATTGGCAGAATCGTTTGAGTACATAGGGCGTGCGGAACCTGAGTCACTTCATGGCGGTTTATTTATGGAATTCAAAAATGAGGAAGCTACAGGTCCAGGTGTACTGCGGGAGTGGTTCTTTTTGGTATGCCAGGCCATATTTAATCCCCAAAATGCACTTTTTGTGGCATGCCCTAACGACCGTAGAAGGTTCTATCCTAATCCAGCATCTAAGGTTGATCCTCTGCACCTCGAGTATTTCACCTTTGCTGGCCGGGTGATTGCATTGGCTTTGATGCATAAAGTGCAGGTGGGCATAGTCTTTGATCGTGTGTTTTTCCAGCAACTGGCAGGAGATATATATTTATCTTTGGAAGACATAAGAGATGCAGATCCATTCTTGTATAATAGTTGCAAGCAGATACTAGAAATGGATGCCGATTTTATTGATTCAGATGCTCTAGGGTTGACATTTGTTAGAGAAGTGGAGGAGTTAGGATTCATGAAAACTGTGGAGCTTTGCCCTGGTGGGAAAAGCATTGTTGTGAACAGCAAGAACAGGGGGGAATATGTTAATCTGCTAATTCAGCATCGTTTTGTCACATCTATATCTGAACAGGTGTCCCAATTTGCGCATGGCTTTTCTGATATACTCTGTGGATCAAGGCTCCAGAGTGTGTTTTTCCAAAGTTTAGAGCTAGAAGATCTTGATTGGATGCTTCACGGAAGTGAAAGTGCTATTAGCATTGAAGATTGGAAAGCACATACTGATTACAATGGCTATAAAGAGACTGATCCTCATATACTTTGGTTCTGGAAGATTGTTGGGGAAATGTCTGCAGAGCAGAAAAAGGTTCTTCTCTTCTTTTGGACCTCAGTGAAGTATCTTCCAGTCGAGGGGTTCCGAGGTTTGGCTTCTCGGCTTTACATTTACAAGTCCTCAGAGGCTTACAGTCGCCTGCCTTCGTCTCATACATGCTTTTACAGATTGTGTTTCCCTCCATATCCATCGAAGGCAGTGATGAAAAGCCGCCTTAACATCATCACCCAGGAACATGTCGGCAGTAGCTTCGGGACATGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0006950 GO:0006979 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0009636 GO:0009719 GO:0009725 GO:0009753 GO:0009987 GO:0010033 GO:0010035 GO:0010150 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0032501 GO:0032502 GO:0036211 GO:0042221 GO:0042493 GO:0042542 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046677 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0090693 GO:0099402 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04011 ko04120 ko04144 ko04530 ko05169 map04011 map04120 map04144 map04530 map05169

Pfam Domains

Protein Families

HECT ubiquitin

Protein Analysis

919

Amino Acids

103.45

Weight (kDa)

5.82

Isoelectric Point (pI)

49.45

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007796)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12570
fragaria_vesca	FvH4_3g00910 FvH4_3g00910
malus_domestica	MD05G1358400.v1.1 MD10G1332500.v1.1
prunus_persica	Prupe.4G009700_v2.0.a1 Prupe.4G009700_v2.0.a1
pyrus_communis	pycom05g32410 pycom10g28190
rosa_chinensis	RchiOBHm_Chr5g0001411 RchiOBHm_Chr5g0001431
rosa_laevigata	RLG00000030927
rosa_multiflora	Rmu_sc0003749.1_g000014
rosa_roxburghii	Rroxscaffold_1G00074960 Rroxscaffold_1G00074970
rosa_rugosa	Rorug04G0390300
rosa_samantha	Rh5AG010900 Rh5AG011000 Rh5BG013500 Rh5CG011900 Rh5CG012000 Rh5DG011200 Rh7AG192400
rosa_wichuraiana	Rw5G001040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1972
Acc16I	TGCGCA	2 cut(s)	1205, 2307
Acc36I	ACCTGC	1 cut(s)	1972
AccB1I	GGYRCC	1 cut(s)	245
AccB7I	CCANNNNNTGG	1 cut(s)	2020
AccI	GTMKAC	1 cut(s)	347
AccII	CGCG	3 cut(s)	86, 917, 1552
AclWI	GGATC	6 cut(s)	99, 1227, 1907, 2060, 2341, 2462
AcoI	YGGCCR	3 cut(s)	537, 580, 1945
AcsI	RAATTY	5 cut(s)	850, 871, 1024, 1455, 1763
AcyI	GRCGYC	3 cut(s)	246, 282, 561
AfaI	GTAC	5 cut(s)	878, 977, 1173, 1715, 1797
AflIII	ACRYGT	1 cut(s)	2728
AgsI	TTSAA	6 cut(s)	855, 1069, 1234, 1258, 1768, 2423
AjiI	CACGTC	1 cut(s)	196
AjnI	CCWGG	7 cut(s)	414, 611, 621, 1789, 1824, 2197, 2721
AleI	CACNNNNGTG	1 cut(s)	2400
Alw21I	GWGCWC	2 cut(s)	596, 1531
Alw26I	GTCTC	7 cut(s)	640, 728, 1425, 1611, 1692, 2456, 2646
AlwI	GGATC	6 cut(s)	99, 1227, 1907, 2060, 2341, 2462
AlwNI	CAGNNNCTG	3 cut(s)	845, 1043, 2020
Ama87I	CYCGRG	2 cut(s)	294, 1925
ApaI	GGGCCC	1 cut(s)	147
ApeKI	GCWGC	9 cut(s)	27, 30, 47, 60, 224, 517, 520, 1250, 1663
ApoI	RAATTY	5 cut(s)	850, 871, 1024, 1455, 1763
Asp700I	GAANNNNTTC	1 cut(s)	669
AspS9I	GGNCC	8 cut(s)	143, 144, 354, 787, 967, 1135, 1787, 2544
AsuC2I	CCSGG	6 cut(s)	13, 295, 296, 358, 767, 1949
AsuHPI	GGTGA	7 cut(s)	448, 460, 593, 1409, 1927, 1963, 2710
AsuII	TTCGAA	2 cut(s)	486, 649
AvaI	CYCGRG	2 cut(s)	294, 1925
AvaII	GGWCC	5 cut(s)	354, 967, 1135, 1787, 2544
AxyI	CCTNAGG	1 cut(s)	606
BaeGI	GKGCMC	1 cut(s)	147
BanI	GGYRCC	1 cut(s)	245
BanII	GRGCYC	4 cut(s)	20, 147, 219, 1519
BbsI	GAAGAC	2 cut(s)	1656, 2055
Bbv12I	GWGCWC	2 cut(s)	596, 1531
BbvI	GCAGC	9 cut(s)	34, 39, 42, 72, 211, 504, 532, 1262, 1650
BccI	CCATC	4 cut(s)	14, 1013, 1410, 2689
BceAI	ACGGC	5 cut(s)	59, 259, 340, 664, 1141
BciT130I	CCWGG	7 cut(s)	416, 613, 623, 1791, 1826, 2199, 2723
BclI	TGATCA	1 cut(s)	1561
BcnI	CCSGG	6 cut(s)	13, 295, 296, 358, 767, 1949
BcoDI	GTCTC	7 cut(s)	640, 728, 1425, 1611, 1692, 2456, 2646
BfaI	CTAG	7 cut(s)	188, 1113, 1532, 1595, 2099, 2135, 2372
BfmI	CTRYAG	5 cut(s)	518, 1209, 1248, 1782, 2511
BfoI	RGCGCY	2 cut(s)	249, 800
BfuAI	ACCTGC	1 cut(s)	1972
BglI	GCCNNNNNGGC	1 cut(s)	794
BglII	AGATCT	1 cut(s)	2377
Bme18I	GGWCC	5 cut(s)	354, 967, 1135, 1787, 2544
BmeT110I	CYCGRG	2 cut(s)	294, 1925
BmgBI	CACGTC	1 cut(s)	196
BmgT120I	GGNCC	8 cut(s)	143, 144, 354, 787, 967, 1135, 1787, 2544
BpiI	GAAGAC	2 cut(s)	1656, 2055
BplI	GAGNNNNNCTC	2 cut(s)	981, 1013
BpmI	CTGGAG	2 cut(s)	644, 2327
Bpu10I	CCTNAGC	1 cut(s)	426
Bpu14I	TTCGAA	2 cut(s)	486, 649
BpuMI	CCSGG	6 cut(s)	13, 295, 296, 358, 767, 1949
BsaAI	YACGTR	1 cut(s)	1175
BsaBI	GATNNNNATC	2 cut(s)	1563, 2064
BsaHI	GRCGYC	3 cut(s)	246, 282, 561
BsaI	GGTCTC	2 cut(s)	1425, 1692
BsaWI	WCCGGW	1 cut(s)	478
BsaXI	ACNNNNNCTCC	6 cut(s)	248, 278, 518, 548, 620, 650
Bse118I	RCCGGY	1 cut(s)	470
Bse1I	ACTGG	4 cut(s)	564, 579, 2025, 2564
Bse21I	CCTNAGG	1 cut(s)	606
Bse8I	GATNNNNATC	2 cut(s)	1563, 2064
BseBI	CCWGG	7 cut(s)	416, 613, 623, 1791, 1826, 2199, 2723
BseGI	GGATG	9 cut(s)	207, 456, 708, 1171, 1276, 1348, 1421, 2113, 2394
BseJI	GATNNNNATC	2 cut(s)	1563, 2064
BseNI	ACTGG	4 cut(s)	564, 579, 2025, 2564
BsePI	GCGCGC	1 cut(s)	915
BseRI	GAGGAG	5 cut(s)	256, 977, 1307, 1673, 2177
BseSI	GKGCMC	1 cut(s)	147
BseX3I	CGGCCG	1 cut(s)	580
BseXI	GCAGC	9 cut(s)	34, 39, 42, 72, 211, 504, 532, 1262, 1650
BseYI	CCCAGC	2 cut(s)	1376, 1476
BsgI	GTGCAG	2 cut(s)	1904, 2000
Bsh1236I	CGCG	3 cut(s)	86, 917, 1552
Bsh1285I	CGRYCG	4 cut(s)	314, 454, 583, 1876
BshNI	GGYRCC	1 cut(s)	245
BsiEI	CGRYCG	4 cut(s)	314, 454, 583, 1876
BsiHKAI	GWGCWC	2 cut(s)	596, 1531
BsiHKCI	CYCGRG	2 cut(s)	294, 1925
BsiSI	CCGG	9 cut(s)	12, 295, 358, 471, 479, 524, 744, 766, 1948
BslFI	GGGAC	3 cut(s)	340, 1065, 2281
BsmAI	GTCTC	7 cut(s)	640, 728, 1425, 1611, 1692, 2456, 2646
BsmBI	CGTCTC	2 cut(s)	728, 2646
BsmFI	GGGAC	3 cut(s)	340, 1065, 2281
BsmI	GAATGC	2 cut(s)	474, 1352
Bso31I	GGTCTC	2 cut(s)	1425, 1692
BsoBI	CYCGRG	2 cut(s)	294, 1925
Bsp119I	TTCGAA	2 cut(s)	486, 649
Bsp120I	GGGCCC	1 cut(s)	143
Bsp1286I	GDGCHC	6 cut(s)	20, 147, 219, 596, 1519, 1531
Bsp19I	CCATGG	1 cut(s)	720
BspFNI	CGCG	3 cut(s)	86, 917, 1552
BspHI	TCATGA	2 cut(s)	673, 2175
BspMAI	CTGCAG	4 cut(s)	522, 1213, 1252, 2515
BspMI	ACCTGC	1 cut(s)	1972
BspPI	GGATC	6 cut(s)	99, 1227, 1907, 2060, 2341, 2462
BspT104I	TTCGAA	2 cut(s)	486, 649
BspT107I	GGYRCC	1 cut(s)	245
BspTNI	GGTCTC	2 cut(s)	1425, 1692
BsrFI	RCCGGY	1 cut(s)	470
BsrI	ACTGG	4 cut(s)	564, 579, 2025, 2564
BssAI	RCCGGY	1 cut(s)	470
BssHII	GCGCGC	1 cut(s)	915
BssNI	GRCGYC	3 cut(s)	246, 282, 561
BssT1I	CCWWGG	3 cut(s)	720, 792, 1351
Bst2UI	CCWGG	7 cut(s)	416, 613, 623, 1791, 1826, 2199, 2723
Bst4CI	ACNGT	6 cut(s)	37, 506, 841, 1877, 2185, 2627
Bst6I	CTCTTC	2 cut(s)	660, 2540
BstACI	GRCGYC	3 cut(s)	246, 282, 561
BstAPI	GCANNNNNTGC	2 cut(s)	1672, 1978
BstBAI	YACGTR	1 cut(s)	1175
BstBI	TTCGAA	2 cut(s)	486, 649
BstDSI	CCRYGG	2 cut(s)	84, 720
BstF5I	GGATG	9 cut(s)	207, 456, 708, 1171, 1276, 1348, 1421, 2113, 2394
BstFNI	CGCG	3 cut(s)	86, 917, 1552
BstH2I	RGCGCY	2 cut(s)	249, 800
BstMAI	GTCTC	7 cut(s)	640, 728, 1425, 1611, 1692, 2456, 2646
BstMCI	CGRYCG	4 cut(s)	314, 454, 583, 1876
BstNI	CCWGG	7 cut(s)	416, 613, 623, 1791, 1826, 2199, 2723
BstNSI	RCATGY	3 cut(s)	1866, 2652, 2732
BstSFI	CTRYAG	5 cut(s)	518, 1209, 1248, 1782, 2511
BstSLI	GKGCMC	1 cut(s)	147
BstUI	CGCG	3 cut(s)	86, 917, 1552
BstV1I	GCAGC	9 cut(s)	34, 39, 42, 72, 211, 504, 532, 1262, 1650
BstV2I	GAAGAC	2 cut(s)	1656, 2055
BstX2I	RGATCY	2 cut(s)	2065, 2377
BstYI	RGATCY	2 cut(s)	2065, 2377
BstZI	CGGCCG	1 cut(s)	580
Bsu36I	CCTNAGG	1 cut(s)	606
BtgI	CCRYGG	2 cut(s)	84, 720
BtrI	CACGTC	1 cut(s)	196
BtsCI	GGATG	9 cut(s)	207, 456, 708, 1171, 1276, 1348, 1421, 2113, 2394
BtsI	GCAGTG	3 cut(s)	69, 1206, 2697
BtsIMutI	CAGTG	5 cut(s)	69, 1206, 1574, 2556, 2697
BveI	ACCTGC	1 cut(s)	1972
CaiI	CAGNNNCTG	3 cut(s)	845, 1043, 2020
CciI	TCATGA	2 cut(s)	673, 2175
Cfr10I	RCCGGY	1 cut(s)	470
Cfr13I	GGNCC	8 cut(s)	143, 144, 354, 787, 967, 1135, 1787, 2544
Cfr42I	CCGCGG	1 cut(s)	87
Cfr9I	CCCGGG	1 cut(s)	294
CseI	GACGC	3 cut(s)	179, 290, 569
Csp6I	GTAC	5 cut(s)	877, 976, 1172, 1714, 1796
CviQI	GTAC	5 cut(s)	877, 976, 1172, 1714, 1796
DinI	GGCGCC	1 cut(s)	247
DraI	TTTAAA	1 cut(s)	1440
EaeI	YGGCCR	3 cut(s)	537, 580, 1945
EagI	CGGCCG	1 cut(s)	580
Eam1104I	CTCTTC	2 cut(s)	660, 2540
EarI	CTCTTC	2 cut(s)	660, 2540
EciI	GGCGGA	1 cut(s)	628
EclXI	CGGCCG	1 cut(s)	580
Eco130I	CCWWGG	3 cut(s)	720, 792, 1351
Eco147I	AGGCCT	2 cut(s)	419, 611
Eco24I	GRGCYC	4 cut(s)	20, 147, 219, 1519
Eco31I	GGTCTC	2 cut(s)	1425, 1692
Eco47I	GGWCC	5 cut(s)	354, 967, 1135, 1787, 2544
Eco52I	CGGCCG	1 cut(s)	580
Eco81I	CCTNAGG	1 cut(s)	606
Eco88I	CYCGRG	2 cut(s)	294, 1925
EcoO109I	RGGNCCY	1 cut(s)	967
EcoRI	GAATTC	2 cut(s)	871, 1763
EcoRII	CCWGG	7 cut(s)	414, 611, 621, 1789, 1824, 2197, 2721
EcoT14I	CCWWGG	3 cut(s)	720, 792, 1351
EcoT22I	ATGCAT	1 cut(s)	1974
EcoT38I	GRGCYC	4 cut(s)	20, 147, 219, 1519
EgeI	GGCGCC	1 cut(s)	247
EheI	GGCGCC	1 cut(s)	247
ErhI	CCWWGG	3 cut(s)	720, 792, 1351
Esp3I	CGTCTC	2 cut(s)	728, 2646
FaqI	GGGAC	3 cut(s)	340, 1065, 2281
FauI	CCCGC	2 cut(s)	134, 1794
FbaI	TGATCA	1 cut(s)	1561
FblI	GTMKAC	1 cut(s)	347
FokI	GGATG	9 cut(s)	214, 443, 715, 1178, 1263, 1355, 1428, 2120, 2401
FriOI	GRGCYC	4 cut(s)	20, 147, 219, 1519
FspBI	CTAG	7 cut(s)	188, 1113, 1532, 1595, 2099, 2135, 2372
FspI	TGCGCA	2 cut(s)	1205, 2307
GsaI	CCCAGC	2 cut(s)	1380, 1480
GsuI	CTGGAG	2 cut(s)	644, 2327
HaeII	RGCGCY	2 cut(s)	249, 800
HapII	CCGG	9 cut(s)	12, 295, 358, 471, 479, 524, 744, 766, 1948
HgaI	GACGC	3 cut(s)	179, 290, 569
Hin1I	GRCGYC	3 cut(s)	246, 282, 561
HincII	GTYRAC	2 cut(s)	348, 2142
HindII	GTYRAC	2 cut(s)	348, 2142
HpaII	CCGG	9 cut(s)	12, 295, 358, 471, 479, 524, 744, 766, 1948
HphI	GGTGA	7 cut(s)	448, 460, 593, 1409, 1927, 1963, 2710
Hpy166II	GTNNAC	6 cut(s)	193, 348, 995, 1796, 2142, 2221
Hpy8I	GTNNAC	6 cut(s)	193, 348, 995, 1796, 2142, 2221
Hpy99I	CGWCG	9 cut(s)	41, 80, 134, 161, 164, 173, 238, 563, 685
HpyAV	CCTTC	9 cut(s)	160, 202, 724, 1148, 1252, 1506, 1875, 2646, 2680
HpyCH4III	ACNGT	6 cut(s)	37, 506, 841, 1877, 2185, 2627
HpyCH4IV	ACGT	4 cut(s)	195, 978, 1174, 1311
HpySE526I	ACGT	4 cut(s)	195, 978, 1174, 1311
Hsp92I	GRCGYC	3 cut(s)	246, 282, 561
KasI	GGCGCC	1 cut(s)	245
Ksp22I	TGATCA	1 cut(s)	1561
KspI	CCGCGG	1 cut(s)	87
Lsp1109I	GCAGC	9 cut(s)	34, 39, 42, 72, 211, 504, 532, 1262, 1650
MaeI	CTAG	7 cut(s)	188, 1113, 1532, 1595, 2099, 2135, 2372
MaeII	ACGT	4 cut(s)	195, 978, 1174, 1311
MaeIII	GTNAC	3 cut(s)	278, 1737, 2272
MflI	RGATCY	2 cut(s)	2065, 2377
MhlI	GDGCHC	6 cut(s)	20, 147, 219, 596, 1519, 1531
Mly113I	GGCGCC	1 cut(s)	246
MlyI	GAGTC	7 cut(s)	338, 343, 353, 1028, 1376, 1613, 1745
MmeI	TCCRAC	4 cut(s)	180, 264, 990, 1143
Mph1103I	ATGCAT	1 cut(s)	1974
MroXI	GAANNNNTTC	1 cut(s)	669
MseI	TTAA	7 cut(s)	1439, 1491, 1578, 1644, 1836, 2247, 2709
MslI	CAYNNNNRTG	3 cut(s)	1587, 2216, 2400
MspA1I	CMGCKG	2 cut(s)	86, 517
MspI	CCGG	9 cut(s)	12, 295, 358, 471, 479, 524, 744, 766, 1948
Mva1269I	GAATGC	2 cut(s)	474, 1352
MvaI	CCWGG	7 cut(s)	416, 613, 623, 1791, 1826, 2199, 2723
MvnI	CGCG	3 cut(s)	86, 917, 1552
NarI	GGCGCC	1 cut(s)	246
NciI	CCSGG	6 cut(s)	13, 295, 296, 358, 767, 1949
NcoI	CCATGG	1 cut(s)	720
NmeAIII	GCCGAG	5 cut(s)	565, 683, 764, 1013, 2572
NmuCI	GTSAC	3 cut(s)	278, 1737, 2272
NsbI	TGCGCA	2 cut(s)	1205, 2307
NsiI	ATGCAT	1 cut(s)	1974
NspI	RCATGY	3 cut(s)	1866, 2652, 2732
NspV	TTCGAA	2 cut(s)	486, 649
OliI	CACNNNNGTG	1 cut(s)	2400
PaeI	GCATGC	1 cut(s)	1866
PaeR7I	CTCGAG	1 cut(s)	1925
PagI	TCATGA	2 cut(s)	673, 2175
PaqCI	CACCTGC	1 cut(s)	1972
PauI	GCGCGC	1 cut(s)	915
PceI	AGGCCT	2 cut(s)	419, 611
PciI	ACATGT	1 cut(s)	2728
PcsI	WCGNNNNNNNCGW	2 cut(s)	165, 655
PctI	GAATGC	2 cut(s)	474, 1352
PdmI	GAANNNNTTC	1 cut(s)	669
PfeI	GAWTC	5 cut(s)	230, 670, 1703, 2123, 2172
PflFI	GACNNNGTC	2 cut(s)	352, 632
PflMI	CCANNNNNTGG	1 cut(s)	2020
PfoI	TCCNGGA	2 cut(s)	356, 621
Ple19I	CGATCG	1 cut(s)	454
PleI	GAGTC	7 cut(s)	337, 343, 352, 1028, 1375, 1612, 1744
PluTI	GGCGCC	1 cut(s)	249
PpsI	GAGTC	7 cut(s)	337, 343, 352, 1028, 1375, 1612, 1744
Ppu21I	YACGTR	1 cut(s)	1175
PpuMI	RGGWCCY	1 cut(s)	967
PscI	ACATGT	1 cut(s)	2728
Psp5II	RGGWCCY	1 cut(s)	967
Psp6I	CCWGG	7 cut(s)	414, 611, 621, 1789, 1824, 2197, 2721
PspFI	CCCAGC	2 cut(s)	1376, 1476
PspGI	CCWGG	7 cut(s)	414, 611, 621, 1789, 1824, 2197, 2721
PspOMI	GGGCCC	1 cut(s)	143
PspPI	GGNCC	8 cut(s)	143, 144, 354, 787, 967, 1135, 1787, 2544
PspPPI	RGGWCCY	1 cut(s)	967
PspXI	VCTCGAGB	1 cut(s)	1925
PstI	CTGCAG	4 cut(s)	522, 1213, 1252, 2515
PstNI	CAGNNNCTG	3 cut(s)	845, 1043, 2020
PsuI	RGATCY	2 cut(s)	2065, 2377
PsyI	GACNNNGTC	2 cut(s)	352, 632
PteI	GCGCGC	1 cut(s)	915
PvuI	CGATCG	1 cut(s)	454
PvuII	CAGCTG	1 cut(s)	517
RsaI	GTAC	5 cut(s)	878, 977, 1173, 1715, 1797
RsaNI	GTAC	5 cut(s)	877, 976, 1172, 1714, 1796
RseI	CAYNNNNRTG	3 cut(s)	1587, 2216, 2400
SacII	CCGCGG	1 cut(s)	87
SalI	GTCGAC	1 cut(s)	346
SaqAI	TTAA	7 cut(s)	1439, 1491, 1578, 1644, 1836, 2247, 2709
Sau96I	GGNCC	8 cut(s)	143, 144, 354, 787, 967, 1135, 1787, 2544
SchI	GAGTC	7 cut(s)	338, 343, 353, 1028, 1376, 1613, 1745
SduI	GDGCHC	6 cut(s)	20, 147, 219, 596, 1519, 1531
SfcI	CTRYAG	5 cut(s)	518, 1209, 1248, 1782, 2511
SfoI	GGCGCC	1 cut(s)	247
Sfr274I	CTCGAG	1 cut(s)	1925
Sfr303I	CCGCGG	1 cut(s)	87
SfuI	TTCGAA	2 cut(s)	486, 649
SgrBI	CCGCGG	1 cut(s)	87
SinI	GGWCC	5 cut(s)	354, 967, 1135, 1787, 2544
SlaI	CTCGAG	1 cut(s)	1925
SmaI	CCCGGG	1 cut(s)	296
SmiMI	CAYNNNNRTG	3 cut(s)	1587, 2216, 2400
SmlI	CTYRAG	1 cut(s)	1925
SmoI	CTYRAG	1 cut(s)	1925
SphI	GCATGC	1 cut(s)	1866
SseBI	AGGCCT	2 cut(s)	419, 611
SspDI	GGCGCC	1 cut(s)	245
SspI	AATATT	1 cut(s)	1695
SspMI	CTAG	7 cut(s)	188, 1113, 1532, 1595, 2099, 2135, 2372
StuI	AGGCCT	2 cut(s)	419, 611
StyI	CCWWGG	3 cut(s)	720, 792, 1351
TaaI	ACNGT	6 cut(s)	37, 506, 841, 1877, 2185, 2627
TaiI	ACGT	4 cut(s)	198, 981, 1177, 1314
TaqII	GACCGA	2 cut(s)	328, 342
TatI	WGTACW	2 cut(s)	1713, 1795
TauI	GCSGC	5 cut(s)	83, 86, 585, 644, 2706
TfiI	GAWTC	5 cut(s)	230, 670, 1703, 2123, 2172
Tru1I	TTAA	7 cut(s)	1439, 1491, 1578, 1644, 1836, 2247, 2709
Tru9I	TTAA	7 cut(s)	1439, 1491, 1578, 1644, 1836, 2247, 2709
TscAI	CASTG	5 cut(s)	76, 1213, 1574, 2556, 2697
TseFI	GTSAC	3 cut(s)	278, 1737, 2272
TseI	GCWGC	9 cut(s)	27, 30, 47, 60, 224, 517, 520, 1250, 1663
Tsp45I	GTSAC	3 cut(s)	278, 1737, 2272
TspDTI	ATGAA	7 cut(s)	367, 662, 1359, 1733, 2164, 2192, 2711
TspGWI	ACGGA	2 cut(s)	768, 2412
TspMI	CCCGGG	1 cut(s)	294
TspRI	CASTG	5 cut(s)	76, 1213, 1574, 2556, 2697
Tth111I	GACNNNGTC	2 cut(s)	352, 632
Van91I	CCANNNNNTGG	1 cut(s)	2020
VpaK11BI	GGWCC	5 cut(s)	354, 967, 1135, 1787, 2544
XapI	RAATTY	5 cut(s)	850, 871, 1024, 1455, 1763
XbaI	TCTAGA	1 cut(s)	1594
XceI	RCATGY	3 cut(s)	1866, 2652, 2732
XcmI	CCANNNNNNNNNTGG	2 cut(s)	571, 2306
XhoI	CTCGAG	1 cut(s)	1925
XmaI	CCCGGG	1 cut(s)	294
XmiI	GTMKAC	1 cut(s)	347
XmnI	GAANNNNTTC	1 cut(s)	669
XspI	CTAG	7 cut(s)	188, 1113, 1532, 1595, 2099, 2135, 2372
Zsp2I	ATGCAT	1 cut(s)	1974

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.