Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0011095

Physical Location & Seq

Genomic Coordinates Forward (+)

25623242 .. 25628337

Gene Structure 5096 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1116900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2331 bp

ATGGAGACCCAATCGGAAGGCGGAGGAGACAAATCTATAGCCAGCATCCGAACCATGGCTCAACAGCTCGAAGCTCGAATAGAGTCTCAACGCACCACCCAGCTCGAACTCCTCTCGTACCTCCAATCCCAAATCGGCCCCACCATCGTCCCCACCATTGATCTCTCTCTCAAGGTTCTCTCCGCCTTCAACGACCGCCCTTTTACTCCCACGCCTCCTCTTCCCGACCCCAAACCAAACCCCAGAAAGCCGATCGAACCCACTCTCCCTTCGACCCCAGAACCCCACCGCAGCCGTCTCCCGTCCCCTGAGCCGAAACCCACTAACCCAATTGACCAAAGCCCGAAGCTTTCTTTGAAACCGGAGAATTCGGAGCCGACCCACCAAGCAGAACCGGAGAAATTCAGCCCCATTGATGAGATGGGGAACCCGTTGTCACTGGTTCGGGCTATGGTGGCGGTTTGCTTACTTGAAATAGTGCCCTTTTCGCGAATTGACTCGTCAGCAGTGTTGAGGAAGCTTGAGGGCGACCAGAAAGCGACTGAGGAGGAGAAGGCAGCCTTGAGTGAGATGGGAGGAGAGTCCGGGGCGATATTGGCGGTGGAGATGGCGTTGAGGTCAATGGCGGAGGAGAACGGTGGTGTGGAGTTGGAGTTTGTGGTGGGTGGTAAGTCGAGGGTTGTCGTTTTGGGGATTGACCGGACTCGGCTGATGAAGGAATTGCCAGAAAGCAAGCAGTTTCATAGTCGAGATTTGAATTCAGGAGTTGGGAATGGGAGTTTGAGTCAGAATCAGCAGCAAGTGGTGACTAGCGGCAGCGATGGTAACGGAGGTGGAGTGTTTGGGATGGGAGGCCCTAGTTCAAGGCCAATGCAGGACATGTGGATGAACCCTAATGATGCTCATATGGCCAGTTTTCCGCCTATGTTTCCTGGGAGTGGACAGCCGGGTTCATTTATGGGTCCAAGGGGTGCTCCTAATCCTAGAGTTATGGGCATGATGGGAATGCCTAGAGGGATGGGTGGTGTTCCTCCAATGCATAGAGCTACTAGTATGGGGCCGAATGCAACAATGGATGGCCCCAATTCGATGTCACATAAGCCGCGGAGTGAAGAGGAGGAACTGAAGGATGTTGAGGCACTGTTGAATAAGAAGACTTATAGGGAGTTGCAGAAGTCAAAAACTGGTGAGGAGATTTTGGACCTCATTCACCGGCCAACTGCGAAGGAGACTGCTGTAGCTGCCAAGTTCAAAACTAAAGGTGGTTCACAGTTGAAGGAATACTGCTCATCCTTAACAAAAGAGGACTGCCGGCGTCAGTCTAATTCCATGCTTGCATGTGAGAAGGTTCATTTTAGGCGAATAATCGCTCTACATACCGATGTCAATTTGGGAGACTGTTCTTTTCTAGATACTTGTCGTCACATGAAGACATGCAAGTATGTCCACTACGAGCTTGATCCAACACCTGATGTGTCACACTTGATGATGGGGCCTCCAGCACTCGCTCCACCTAGACAATTAAGGCCTCAACGTGCTGAATACTGTTCTGAGGTTGAACTTGGTCAACCACAGTGGATTAACTGTGATATACGCAACTTTAGAATGGACATTCTTGGGCAATTTGGAGTGATAATGGCAGATCCACCATGGGACATTCATATGGAATTGCCTTACGGGACAATGGCTGATGATGAAATGCGCAATCTTAATGTTCCGGCATTGCAGACTGATGGTCTGATTTTCCTTTGGGTCACTGGACGTGCAATGGAGCTTGGGCGTGAATGTTTAGAATTTTGGGGATACAAGCGTATCGAGGAGATAATTTGGGTAAAGACTAATCAACTTCAACGAATAATTAGAACAGGGCGGACTGGCCACTGGCTTAATCATAGCAAGGAGCATTGTCTTGTTGGAATAAAGGGGGAACCATTAGTAAATAGAAATATTGATACTGATGTCATTGTTGCCGAGGTCAGAGAGACAAGCCGCAAGCCAGATGAGATGTACCCTTTGTTGGAGAGGGTAAGTCCAAGGACAAGAAAACTGGAACTGTTTGCTCGCATGCACAATACTCATGCAGGGTGGATGTCACTAGGTAATCAACTGAGTGGCGTACGATTGGTTGACGAAGGCCTGCGTGCACGATTCAAGGCTGCTTATCCGGAAGTGGAGGTGCAGCCCGCTTCCCCACCCAGGCCATCTGCTATGGAAGTTGACTCTAATGCTGCCCAAATGCGGAGTCCATTTTCAGAACCTGCAGCTCCGGAGGCCCCCTATGCTGCTTCTGAAGTTAAGCCATCACCAATGGACGTTGAAATGGCCGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001510 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008168 GO:0008173 GO:0008174 GO:0008757 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016071 GO:0016422 GO:0016556 GO:0016604 GO:0016607 GO:0016740 GO:0016741 GO:0031974 GO:0031981 GO:0032259 GO:0032991 GO:0034641 GO:0034708 GO:0036396 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045293 GO:0046483 GO:0070013 GO:0071704 GO:0080009 GO:0090304 GO:0140098 GO:1901360 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MT-A70

Protein Analysis

777

Amino Acids

85.9

Weight (kDa)

5.99

Isoelectric Point (pI)

53.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MT-A70	PF05063	542 - 702	9.4e-60	MT-A70

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011095)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G10760
fragaria_vesca	FvH4_5g11050 FvH4_5g11050
malus_domestica	MD06G1116900.v1.1 MD14G1124400.v1.1
prunus_persica	Prupe.5G128200_v2.0.a1
pyrus_communis	pycom06g10900
rosa_chinensis	RchiOBHm_Chr7g0186271 RchiOBHm_Chr7g0186751
rosa_laevigata	RLG00000004819
rosa_multiflora	Rmu_sc0009734.1_g000004
rosa_roxburghii	Rroxscaffold_3G00267860
rosa_rugosa	Rorug06G0473000 Rorug06G0476300
rosa_samantha	Rh7AG064200 Rh7BG080700 Rh7CG083300 Rh7DG084200
rosa_wichuraiana	Rw7G006690 Rw7G007220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1703
Acc36I	ACCTGC	1 cut(s)	2266
AccII	CGCG	2 cut(s)	490, 1105
AccIII	TCCGGA	2 cut(s)	2164, 2266
AclWI	GGATC	2 cut(s)	1454, 1637
AcoI	YGGCCR	4 cut(s)	909, 1214, 1876, 2322
AcsI	RAATTY	4 cut(s)	367, 401, 757, 1793
AcuI	CTGAAG	2 cut(s)	1145, 2310
AcyI	GRCGYC	1 cut(s)	1315
AfaI	GTAC	3 cut(s)	119, 2009, 2118
AfiI	CCNNNNNNNGG	5 cut(s)	55, 938, 2017, 2196, 2238
AflIII	ACRYGT	1 cut(s)	879
AhdI	GACNNNNNGTC	1 cut(s)	1734
AhlI	ACTAGT	1 cut(s)	1049
AjiI	CACGTC	1 cut(s)	1763
AjnI	CCWGG	2 cut(s)	931, 2195
AloI	GAACNNNNNNTCC	2 cut(s)	249, 281
Alw21I	GWGCWC	2 cut(s)	976, 2146
Alw26I	GTCTC	6 cut(s)	21, 90, 302, 1223, 1389, 1976
Alw44I	GTGCAC	1 cut(s)	2142
AlwI	GGATC	2 cut(s)	1454, 1637
AlwNI	CAGNNNCTG	1 cut(s)	2258
Aor13HI	TCCGGA	2 cut(s)	2164, 2266
ApaLI	GTGCAC	1 cut(s)	2142
ApoI	RAATTY	4 cut(s)	367, 401, 757, 1793
ArsI	GACNNNNNNTTYG	2 cut(s)	2227, 2259
AspLEI	GCGC	1 cut(s)	1704
AspS9I	GGNCC	8 cut(s)	137, 854, 962, 1058, 1079, 1201, 1493, 2272
AsuC2I	CCSGG	2 cut(s)	586, 948
AsuHPI	GGTGA	4 cut(s)	817, 1199, 1202, 2295
AvaII	GGWCC	2 cut(s)	962, 1201
BaeGI	GKGCMC	2 cut(s)	483, 2146
BaeI	ACNNNNGTAYC	6 cut(s)	1795, 1795, 1828, 1828, 1944, 1977
BalI	TGGCCA	2 cut(s)	911, 1878
BbsI	GAAGAC	2 cut(s)	1160, 1436
Bbv12I	GWGCWC	2 cut(s)	976, 2146
BceAI	ACGGC	1 cut(s)	279
BciT130I	CCWGG	2 cut(s)	933, 2197
BciVI	GTATCC	1 cut(s)	1796
BcnI	CCSGG	2 cut(s)	586, 948
BcoDI	GTCTC	6 cut(s)	21, 90, 302, 1223, 1389, 1976
BcuI	ACTAGT	1 cut(s)	1049
BfaI	CTAG	8 cut(s)	810, 858, 984, 1011, 1050, 1409, 1515, 2096
BfmI	CTRYAG	3 cut(s)	36, 1236, 2259
BfuAI	ACCTGC	1 cut(s)	2266
BfuI	GTATCC	1 cut(s)	1796
Bme1390I	CCNGG	4 cut(s)	586, 933, 948, 2197
Bme18I	GGWCC	2 cut(s)	962, 1201
BmeRI	GACNNNNNGTC	1 cut(s)	1734
BmgBI	CACGTC	1 cut(s)	1763
BmgT120I	GGNCC	8 cut(s)	137, 854, 962, 1058, 1079, 1201, 1493, 2272
BmiI	GGNNCC	9 cut(s)	139, 375, 428, 963, 1059, 1081, 1494, 1929, 2274
BmrFI	CCNGG	4 cut(s)	586, 933, 948, 2197
BmsI	GCATC	2 cut(s)	54, 889
BpiI	GAAGAC	2 cut(s)	1160, 1436
BpmI	CTGGAG	1 cut(s)	1482
Bpu10I	CCTNAGC	1 cut(s)	309
BpuEI	CTTGAG	3 cut(s)	155, 542, 583
BpuMI	CCSGG	2 cut(s)	586, 948
BsaHI	GRCGYC	1 cut(s)	1315
BsaJI	CCNNGG	9 cut(s)	54, 585, 932, 965, 1103, 1649, 1971, 2033, 2195
BsaWI	WCCGGW	5 cut(s)	361, 394, 699, 2164, 2266
Bsc4I	CCNNNNNNNGG	5 cut(s)	55, 938, 2017, 2196, 2238
Bse118I	RCCGGY	3 cut(s)	1212, 1311, 2324
Bse1I	ACTGG	7 cut(s)	444, 912, 1189, 1762, 1879, 1886, 2052
Bse3DI	GCAATG	2 cut(s)	1721, 1773
BseAI	TCCGGA	2 cut(s)	2164, 2266
BseBI	CCWGG	2 cut(s)	933, 2197
BseDI	CCNNGG	9 cut(s)	54, 585, 932, 965, 1103, 1649, 1971, 2033, 2195
BseGI	GGATG	8 cut(s)	45, 852, 891, 1023, 1081, 1135, 1289, 2094
BseLI	CCNNNNNNNGG	5 cut(s)	55, 938, 2017, 2196, 2238
BseMI	GCAATG	2 cut(s)	1721, 1773
BseMII	CTCAG	4 cut(s)	300, 534, 1542, 2099
BseNI	ACTGG	7 cut(s)	444, 912, 1189, 1762, 1879, 1886, 2052
BseSI	GKGCMC	2 cut(s)	483, 2146
BseYI	CCCAGC	1 cut(s)	99
BsgI	GTGCAG	1 cut(s)	2198
Bsh1236I	CGCG	2 cut(s)	490, 1105
Bsh1285I	CGRYCG	2 cut(s)	196, 255
BsiEI	CGRYCG	2 cut(s)	196, 255
BsiHKAI	GWGCWC	2 cut(s)	976, 2146
BsiWI	CGTACG	1 cut(s)	2116
BslFI	GGGAC	4 cut(s)	134, 289, 1667, 1693
BslI	CCNNNNNNNGG	5 cut(s)	55, 938, 2017, 2196, 2238
BsmAI	GTCTC	6 cut(s)	21, 90, 302, 1223, 1389, 1976
BsmBI	CGTCTC	1 cut(s)	302
BsmFI	GGGAC	4 cut(s)	134, 289, 1667, 1693
BsmI	GAATGC	2 cut(s)	1011, 1069
Bsp1286I	GDGCHC	3 cut(s)	483, 976, 2146
Bsp13I	TCCGGA	2 cut(s)	2164, 2266
Bsp143I	GATC	4 cut(s)	160, 252, 1459, 1642
Bsp19I	CCATGG	2 cut(s)	54, 1649
Bsp68I	TCGCGA	1 cut(s)	490
BspCNI	CTCAG	4 cut(s)	301, 535, 1543, 2100
BspEI	TCCGGA	2 cut(s)	2164, 2266
BspFNI	CGCG	2 cut(s)	490, 1105
BspLI	GGNNCC	9 cut(s)	139, 375, 428, 963, 1059, 1081, 1494, 1929, 2274
BspMAI	CTGCAG	1 cut(s)	2263
BspMI	ACCTGC	1 cut(s)	2266
BspPI	GGATC	2 cut(s)	1454, 1637
BsrDI	GCAATG	2 cut(s)	1721, 1773
BsrFI	RCCGGY	3 cut(s)	1212, 1311, 2324
BsrI	ACTGG	7 cut(s)	444, 912, 1189, 1762, 1879, 1886, 2052
BssAI	RCCGGY	3 cut(s)	1212, 1311, 2324
BssECI	CCNNGG	9 cut(s)	54, 585, 932, 965, 1103, 1649, 1971, 2033, 2195
BssMI	GATC	4 cut(s)	160, 252, 1459, 1642
BssNI	GRCGYC	1 cut(s)	1315
BssT1I	CCWWGG	4 cut(s)	54, 965, 1649, 2033
Bst2UI	CCWGG	2 cut(s)	933, 2197
Bst4CI	ACNGT	8 cut(s)	638, 1143, 1272, 1400, 1547, 1575, 1586, 2055
Bst6I	CTCTTC	2 cut(s)	225, 1107
BstACI	GRCGYC	1 cut(s)	1315
BstDEI	CTNAG	4 cut(s)	309, 543, 1551, 2108
BstDSI	CCRYGG	3 cut(s)	54, 1103, 1649
BstF5I	GGATG	8 cut(s)	45, 852, 891, 1023, 1081, 1135, 1289, 2094
BstFNI	CGCG	2 cut(s)	490, 1105
BstHHI	GCGC	1 cut(s)	1704
BstKTI	GATC	4 cut(s)	163, 255, 1462, 1645
BstMAI	GTCTC	6 cut(s)	21, 90, 302, 1223, 1389, 1976
BstMBI	GATC	4 cut(s)	160, 252, 1459, 1642
BstMCI	CGRYCG	2 cut(s)	196, 255
BstMWI	GCNNNNNNNGC	7 cut(s)	455, 487, 596, 908, 1241, 2270, 2279
BstNI	CCWGG	2 cut(s)	933, 2197
BstNSI	RCATGY	4 cut(s)	883, 1341, 1437, 2068
BstSCI	CCNGG	4 cut(s)	584, 931, 946, 2195
BstSFI	CTRYAG	3 cut(s)	36, 1236, 2259
BstSLI	GKGCMC	2 cut(s)	483, 2146
BstUI	CGCG	2 cut(s)	490, 1105
BstV2I	GAAGAC	2 cut(s)	1160, 1436
BstX2I	RGATCY	1 cut(s)	1642
BstYI	RGATCY	1 cut(s)	1642
BsuI	GTATCC	1 cut(s)	1796
BtgI	CCRYGG	3 cut(s)	54, 1103, 1649
BtgZI	GCGATG	1 cut(s)	834
BtrI	CACGTC	1 cut(s)	1763
BtsCI	GGATG	8 cut(s)	45, 852, 891, 1023, 1081, 1135, 1289, 2094
BtsI	GCAGTG	1 cut(s)	513
BtsIMutI	CAGTG	6 cut(s)	437, 513, 1139, 1580, 1755, 1879
BtuMI	TCGCGA	1 cut(s)	490
BveI	ACCTGC	1 cut(s)	2266
CaiI	CAGNNNCTG	1 cut(s)	2258
CfoI	GCGC	1 cut(s)	1704
Cfr10I	RCCGGY	3 cut(s)	1212, 1311, 2324
Cfr13I	GGNCC	8 cut(s)	137, 854, 962, 1058, 1079, 1201, 1493, 2272
Cfr42I	CCGCGG	1 cut(s)	1106
CseI	GACGC	1 cut(s)	1304
Csp6I	GTAC	3 cut(s)	118, 2008, 2117
CspCI	CAANNNNNGTGG	2 cut(s)	1556, 1591
CviQI	GTAC	3 cut(s)	118, 2008, 2117
DdeI	CTNAG	4 cut(s)	309, 543, 1551, 2108
DpnI	GATC	4 cut(s)	162, 254, 1461, 1644
DpnII	GATC	4 cut(s)	160, 252, 1459, 1642
DriI	GACNNNNNGTC	1 cut(s)	1734
EaeI	YGGCCR	4 cut(s)	909, 1214, 1876, 2322
Eam1104I	CTCTTC	2 cut(s)	225, 1107
Eam1105I	GACNNNNNGTC	1 cut(s)	1734
EarI	CTCTTC	2 cut(s)	225, 1107
EciI	GGCGGA	5 cut(s)	36, 172, 641, 909, 1885
Eco130I	CCWWGG	4 cut(s)	54, 965, 1649, 2033
Eco147I	AGGCCT	2 cut(s)	1528, 2136
Eco47I	GGWCC	2 cut(s)	962, 1201
Eco57I	CTGAAG	2 cut(s)	1145, 2310
EcoO109I	RGGNCCY	3 cut(s)	854, 1493, 2272
EcoRI	GAATTC	2 cut(s)	367, 757
EcoRII	CCWGG	2 cut(s)	931, 2195
EcoT14I	CCWWGG	4 cut(s)	54, 965, 1649, 2033
EcoT22I	ATGCAT	1 cut(s)	1041
ErhI	CCWWGG	4 cut(s)	54, 965, 1649, 2033
Esp3I	CGTCTC	1 cut(s)	302
FalI	AAGNNNNNCTT	2 cut(s)	545, 577
FaqI	GGGAC	4 cut(s)	134, 289, 1667, 1693
FauI	CCCGC	1 cut(s)	2191
FauNDI	CATATG	2 cut(s)	906, 1662
FokI	GGATG	8 cut(s)	32, 859, 898, 1030, 1088, 1142, 1276, 2101
FspBI	CTAG	8 cut(s)	810, 858, 984, 1011, 1050, 1409, 1515, 2096
FspI	TGCGCA	1 cut(s)	1703
GlaI	GCGC	1 cut(s)	1703
GsaI	CCCAGC	1 cut(s)	103
GsuI	CTGGAG	1 cut(s)	1482
HgaI	GACGC	1 cut(s)	1304
HhaI	GCGC	1 cut(s)	1704
Hin1I	GRCGYC	1 cut(s)	1315
Hin6I	GCGC	1 cut(s)	1702
HinP1I	GCGC	1 cut(s)	1702
HincII	GTYRAC	3 cut(s)	1568, 2128, 2218
HindII	GTYRAC	3 cut(s)	1568, 2128, 2218
HindIII	AAGCTT	2 cut(s)	347, 518
HinfI	GANTC	9 cut(s)	83, 497, 581, 703, 784, 790, 2148, 2219, 2242
HphI	GGTGA	4 cut(s)	817, 1199, 1202, 2295
Hpy166II	GTNNAC	7 cut(s)	941, 1268, 1447, 1568, 2128, 2144, 2218
Hpy188I	TCNGA	9 cut(s)	16, 50, 373, 789, 1552, 1740, 1979, 2254, 2290
Hpy188III	TCNNGA	7 cut(s)	224, 489, 749, 762, 1409, 2165, 2267
Hpy8I	GTNNAC	7 cut(s)	941, 1268, 1447, 1568, 2128, 2144, 2218
HpyCH4III	ACNGT	8 cut(s)	638, 1143, 1272, 1400, 1547, 1575, 1586, 2055
HpyCH4IV	ACGT	3 cut(s)	1534, 1762, 2313
HpyF10VI	GCNNNNNNNGC	7 cut(s)	455, 487, 596, 908, 1241, 2270, 2279
HpyF3I	CTNAG	4 cut(s)	309, 543, 1551, 2108
HpySE526I	ACGT	3 cut(s)	1534, 1762, 2313
Hsp92I	GRCGYC	1 cut(s)	1315
HspAI	GCGC	1 cut(s)	1702
Kpn2I	TCCGGA	2 cut(s)	2164, 2266
KroI	GCCGGC	1 cut(s)	1311
KroNI	GCCGGC	1 cut(s)	1313
KspI	CCGCGG	1 cut(s)	1106
Kzo9I	GATC	4 cut(s)	160, 252, 1459, 1642
LmnI	GCTCC	6 cut(s)	373, 979, 1513, 1771, 1900, 2269
LweI	GCATC	2 cut(s)	54, 889
MaeI	CTAG	8 cut(s)	810, 858, 984, 1011, 1050, 1409, 1515, 2096
MaeII	ACGT	3 cut(s)	1534, 1762, 2313
MaeIII	GTNAC	8 cut(s)	435, 805, 824, 1092, 1421, 1476, 1753, 2091
MalI	GATC	4 cut(s)	162, 254, 1461, 1644
MboI	GATC	4 cut(s)	160, 252, 1459, 1642
MboII	GAAGA	4 cut(s)	212, 1124, 1165, 1441
MfeI	CAATTG	1 cut(s)	330
MflI	RGATCY	1 cut(s)	1642
MhlI	GDGCHC	3 cut(s)	483, 976, 2146
MlsI	TGGCCA	2 cut(s)	911, 1878
MluNI	TGGCCA	2 cut(s)	911, 1878
MlyI	GAGTC	7 cut(s)	92, 491, 590, 697, 793, 2213, 2251
MmeI	TCCRAC	4 cut(s)	630, 1487, 1894, 1998
Mox20I	TGGCCA	2 cut(s)	911, 1878
Mph1103I	ATGCAT	1 cut(s)	1041
MroI	TCCGGA	2 cut(s)	2164, 2266
MroNI	GCCGGC	1 cut(s)	1311
MscI	TGGCCA	2 cut(s)	911, 1878
MseI	TTAA	7 cut(s)	1295, 1523, 1581, 1710, 1887, 2295, 2329
MslI	CAYNNNNRTG	3 cut(s)	884, 1380, 1661
Msp20I	TGGCCA	2 cut(s)	911, 1878
MspA1I	CMGCKG	1 cut(s)	1105
MspR9I	CCNGG	4 cut(s)	586, 933, 948, 2197
MunI	CAATTG	1 cut(s)	330
Mva1269I	GAATGC	2 cut(s)	1011, 1069
MvaI	CCWGG	2 cut(s)	933, 2197
MvnI	CGCG	2 cut(s)	490, 1105
MwoI	GCNNNNNNNGC	7 cut(s)	455, 487, 596, 908, 1241, 2270, 2279
NaeI	GCCGGC	1 cut(s)	1313
NciI	CCSGG	2 cut(s)	586, 948
NcoI	CCATGG	2 cut(s)	54, 1649
NdeI	CATATG	2 cut(s)	906, 1662
NdeII	GATC	4 cut(s)	160, 252, 1459, 1642
NgoMIV	GCCGGC	1 cut(s)	1311
NlaIV	GGNNCC	9 cut(s)	139, 375, 428, 963, 1059, 1081, 1494, 1929, 2274
NmeAIII	GCCGAG	2 cut(s)	685, 1996
NmuCI	GTSAC	7 cut(s)	435, 805, 1092, 1421, 1476, 1753, 2091
NruI	TCGCGA	1 cut(s)	490
NsbI	TGCGCA	1 cut(s)	1703
NsiI	ATGCAT	1 cut(s)	1041
NspI	RCATGY	4 cut(s)	883, 1341, 1437, 2068
PaeI	GCATGC	1 cut(s)	2068
PceI	AGGCCT	2 cut(s)	1528, 2136
PciI	ACATGT	1 cut(s)	879
PctI	GAATGC	2 cut(s)	1011, 1069
PdiI	GCCGGC	1 cut(s)	1313
PfeI	GAWTC	2 cut(s)	790, 2148
Pfl23II	CGTACG	1 cut(s)	2116
Ple19I	CGATCG	1 cut(s)	255
PleI	GAGTC	7 cut(s)	91, 491, 589, 697, 792, 2213, 2250
PpsI	GAGTC	7 cut(s)	91, 491, 589, 697, 792, 2213, 2250
PscI	ACATGT	1 cut(s)	879
Psp6I	CCWGG	2 cut(s)	931, 2195
PspFI	CCCAGC	1 cut(s)	99
PspGI	CCWGG	2 cut(s)	931, 2195
PspLI	CGTACG	1 cut(s)	2116
PspN4I	GGNNCC	9 cut(s)	139, 375, 428, 963, 1059, 1081, 1494, 1929, 2274
PspPI	GGNCC	8 cut(s)	137, 854, 962, 1058, 1079, 1201, 1493, 2272
PstI	CTGCAG	1 cut(s)	2263
PstNI	CAGNNNCTG	1 cut(s)	2258
PsuI	RGATCY	1 cut(s)	1642
PvuI	CGATCG	1 cut(s)	255
RruI	TCGCGA	1 cut(s)	490
RsaI	GTAC	3 cut(s)	119, 2009, 2118
RsaNI	GTAC	3 cut(s)	118, 2008, 2117
RseI	CAYNNNNRTG	3 cut(s)	884, 1380, 1661
SacII	CCGCGG	1 cut(s)	1106
SaqAI	TTAA	7 cut(s)	1295, 1523, 1581, 1710, 1887, 2295, 2329
Sau3AI	GATC	4 cut(s)	160, 252, 1459, 1642
Sau96I	GGNCC	8 cut(s)	137, 854, 962, 1058, 1079, 1201, 1493, 2272
SchI	GAGTC	7 cut(s)	92, 491, 590, 697, 793, 2213, 2251
ScrFI	CCNGG	4 cut(s)	586, 933, 948, 2197
SduI	GDGCHC	3 cut(s)	483, 976, 2146
SfaNI	GCATC	2 cut(s)	54, 889
SfcI	CTRYAG	3 cut(s)	36, 1236, 2259
Sfr303I	CCGCGG	1 cut(s)	1106
SgrBI	CCGCGG	1 cut(s)	1106
SinI	GGWCC	2 cut(s)	962, 1201
SmiMI	CAYNNNNRTG	3 cut(s)	884, 1380, 1661
SmlI	CTYRAG	3 cut(s)	170, 521, 562
SmoI	CTYRAG	3 cut(s)	170, 521, 562
SpeI	ACTAGT	1 cut(s)	1049
SphI	GCATGC	1 cut(s)	2068
SseBI	AGGCCT	2 cut(s)	1528, 2136
SspI	AATATT	1 cut(s)	1948
SspMI	CTAG	8 cut(s)	810, 858, 984, 1011, 1050, 1409, 1515, 2096
StuI	AGGCCT	2 cut(s)	1528, 2136
StyD4I	CCNGG	4 cut(s)	584, 931, 946, 2195
StyI	CCWWGG	4 cut(s)	54, 965, 1649, 2033
TaaI	ACNGT	8 cut(s)	638, 1143, 1272, 1400, 1547, 1575, 1586, 2055
TaiI	ACGT	3 cut(s)	1537, 1765, 2316
TaqI	TCGA	9 cut(s)	69, 76, 105, 255, 272, 674, 748, 1088, 1815
TauI	GCSGC	3 cut(s)	816, 1105, 1992
TfiI	GAWTC	2 cut(s)	790, 2148
Tru1I	TTAA	7 cut(s)	1295, 1523, 1581, 1710, 1887, 2295, 2329
Tru9I	TTAA	7 cut(s)	1295, 1523, 1581, 1710, 1887, 2295, 2329
TscAI	CASTG	6 cut(s)	444, 513, 1146, 1580, 1762, 1886
TseFI	GTSAC	7 cut(s)	435, 805, 1092, 1421, 1476, 1753, 2091
Tsp45I	GTSAC	7 cut(s)	435, 805, 1092, 1421, 1476, 1753, 2091
TspDTI	ATGAA	8 cut(s)	728, 731, 902, 942, 1340, 1442, 1649, 1710
TspGWI	ACGGA	1 cut(s)	843
TspRI	CASTG	6 cut(s)	444, 513, 1146, 1580, 1762, 1886
VneI	GTGCAC	1 cut(s)	2142
VpaK11BI	GGWCC	2 cut(s)	962, 1201
XapI	RAATTY	4 cut(s)	367, 401, 757, 1793
XbaI	TCTAGA	1 cut(s)	1408
XceI	RCATGY	4 cut(s)	883, 1341, 1437, 2068
XcmI	CCANNNNNNNNNTGG	1 cut(s)	418
XspI	CTAG	8 cut(s)	810, 858, 984, 1011, 1050, 1409, 1515, 2096
Zsp2I	ATGCAT	1 cut(s)	1041

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.