Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0011095

Physical Location & Seq

Genomic Coordinates Forward (+)

20004697 .. 20009873

Gene Structure 5177 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1124400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2334 bp

ATGGAGACCCAATCGGAAGGCGGAGACGAAGCCACCATAGCCGGCATCAGAACCATGGCTCAACAGCTCGAAGCTCGAATGGAGTCTCAGCGCACCACCCAGCTCGAACTCCTCTCTTACCTCCAATCCCAAATCGTCCCCACCATCGTCCCCACCATTGATCTCTCTCTCAAGGTCCTCTCCGCCTTCAACGACCGACCTTTTACTCCAACGCCTCCTCTCCCAAATTCCAAACCAGACCCCAGAAACCCGGTCGAACCCGCTCTCCCTTCGACCCCAGAAGCCCAGCGCAGCCGCCTACCGTCTCCTGAGCCAAAACTCACAAACCCAATTGAGCAAAGCCCGAAGCTTTCTCCGAAACAGGCGAATTCGGAGACAACCCACCAACCCGAACTGGAGAATTTCAGCCCCATTGATGAGATGGGGAATCCATTGTCCCTGGTTCGGGCTATGGTGGCGGTTTGCTTGCTTGAAATTGTGCCCTTTTGTCGAATTGACTCGTCGGCGGTGTTGAGAAAGCTCGAGAGCGACCAAAAAGCGACTGCGGAGGAGAAGGCGGCGCTGCGCGAGATGGGAGGAGAGTCCGGGGCGATATTGGCGGTGGAGATGGCGCTGAGGTCAATGTTGGAGGAGAATGGTGGGGTTGAGTTGGAGGAGTTTGTGGTGGGTGGTAAGTCGGGGATTATGGTTTTGGGGATTGACCGGACTCGGCTGATGAAGGAATTGCCTGAAAGCAAGCAATTTCAGAGTCGAGATTCGAATTTGGGAGATGGGAATTTGAGTCAGAGTCAGCAGCAAGTGGTGACTAGCGGCCGTGGAGGTGATGGTAGTGGTGGAGGGGTGTTTGGGATGGGAGGGCCTAGTTCAAGGCCAATGCAAGACATGTGGATGAACCCTAATGATACTCACATGTCCGGTTTGCCACCTGTGTTCCCTGGGAGTGGACAACCGGGTTCATTTATGGGTCCAAGGGGTGCTCCTAGTCCTAGAGTTATGGGCATGATGGGAATGCCTAGAGGGATGGGTGGTGTTCCTCCAATGCATAGAGCTAATAGTATGGGGCCAAATGCAACAATGGATAGCCCCAATTCAGTGTCGTATAAGCCGCAGAGTGAAGAGGATGAACTGAAGGATGTTGAGGCATTGCTGAATAAGAAGACTTTTAGGGAGTTGCAGAAATCAAAAACTGGTGAGGAGATTTTGGACCTCATTCACCGGCCAACTGCGAAGGAGACTGCTGTAGCTGCCAAGTTCAAAACCAAAGGTGGTTCACAATTGAAGGAATACTGCTCATCCTTAACAAAGGAGGACTGCCGTCGTCAGTCTAATTCCGTACTTGCTTGTGAGAAGGTTCATTTTAGGCGAATAATCGCTCTACATACTGATGTCAATTTAGGAGACTGTTCTTTTCTAGATACTTGTCGTCACATGAAGACGTGCAAGTATGTCCACTATGAGCTTGATCCAACACCTGATGTCTCACACATGATGATGGGGCCTCGAGATCTCGGTCCCCCTAGACAATTAAGGCCTCAACGTGCTGAATACTGTTCTGAGGTAGAACTTGGTCAACCACAGTGGATTAACTGTGATATACGCAACTTTAGAATGGATATTCTAGGGCAATTTGGAGTGATAATGGCAGATCCACCATGGGACATTCATATGGAATTGCCCTATGGGACAATGGCTGACGATGAAATGCGCAATCTTAATGTTCCAGCATTGCAGACGGATGGTCTGATTTTCCTTTGGGTCACTGGACGTGCAATGGAGCTTGGGCGTGAATGTTTAGAACTTTGGGGATACAAGCGAATTGAGGAGATAATTTGGGTAAAGACTAATCAACTCCAACGAATAATTAGAACAGGGCGGACTGGCCACTGGCTTAATCATAGCAAGGAGCATTGTCTTGTTGGAATAAAGGGGGAACCCTTAGTAAATAGAAATATTGATACTGATGTCATTGTTGCCGAGGTCAGAGAGACAAGCCGTAAGCCAGATGAGATGTATCCTTTGCTGGAGAGGGTAAGTCCAAGGACAAGAAAGCTAGAACTGTTTGCTCGCATGCACAATACTCATGCAGGGTGGATGTCACTAGGTAATCAACTGAGTGGTGTAAGATTGGTGGATGAAGGCCTGCGTGCAAGATTCAAAGCTGCTTATCCGGATGTGGAGGTGCAGCCCACTTCCCCACCCAGGCCCTCTGCTATGGAAGTCGACTCTAATGCTGCCCAAATGCGGAGTCCATTCTCAGAACCTGCAGTTCCGGAGGCACCCTATGCTGCTTCTGAAGTGAGGCCATCACCAGTGGATGTTGAAATGGCCGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001510 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008168 GO:0008173 GO:0008174 GO:0008757 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016071 GO:0016422 GO:0016556 GO:0016604 GO:0016607 GO:0016740 GO:0016741 GO:0031974 GO:0031981 GO:0032259 GO:0032991 GO:0034641 GO:0034708 GO:0036396 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045293 GO:0046483 GO:0070013 GO:0071704 GO:0080009 GO:0090304 GO:0140098 GO:1901360 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MT-A70

Protein Analysis

778

Amino Acids

86.02

Weight (kDa)

5.64

Isoelectric Point (pI)

56.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MT-A70	PF05063	543 - 703	3.8e-60	MT-A70

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011095)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G10760
fragaria_vesca	FvH4_5g11050 FvH4_5g11050
malus_domestica	MD06G1116900.v1.1 MD14G1124400.v1.1
prunus_persica	Prupe.5G128200_v2.0.a1
pyrus_communis	pycom06g10900
rosa_chinensis	RchiOBHm_Chr7g0186271 RchiOBHm_Chr7g0186751
rosa_laevigata	RLG00000004819
rosa_multiflora	Rmu_sc0009734.1_g000004
rosa_roxburghii	Rroxscaffold_3G00267860
rosa_rugosa	Rorug06G0473000 Rorug06G0476300
rosa_samantha	Rh7AG064200 Rh7BG080700 Rh7CG083300 Rh7DG084200
rosa_wichuraiana	Rw7G006690 Rw7G007220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1706
Acc36I	ACCTGC	1 cut(s)	2269
AccB1I	GGYRCC	1 cut(s)	2275
AccBSI	CCGCTC	1 cut(s)	263
AccI	GTMKAC	1 cut(s)	2220
AccII	CGCG	1 cut(s)	567
AccIII	TCCGGA	2 cut(s)	2167, 2269
AclWI	GGATC	2 cut(s)	1457, 1640
AcoI	YGGCCR	4 cut(s)	811, 1217, 1879, 2325
AcsI	RAATTY	5 cut(s)	226, 367, 400, 760, 775
AcuI	CTGAAG	2 cut(s)	1148, 2313
AfaI	GTAC	1 cut(s)	1335
AfiI	CCNNNNNNNGG	5 cut(s)	444, 445, 941, 2199, 2241
AflIII	ACRYGT	2 cut(s)	882, 909
AgsI	TTSAA	7 cut(s)	190, 473, 867, 1255, 1279, 2155, 2321
AhdI	GACNNNNNGTC	1 cut(s)	1737
AjiI	CACGTC	2 cut(s)	1437, 1766
AjnI	CCWGG	3 cut(s)	438, 934, 2198
AloI	GAACNNNNNNTCC	2 cut(s)	249, 281
Alw21I	GWGCWC	1 cut(s)	979
Alw26I	GTCTC	8 cut(s)	18, 90, 309, 368, 1226, 1392, 1483, 1979
AlwI	GGATC	2 cut(s)	1457, 1640
AlwNI	CAGNNNCTG	1 cut(s)	2261
Ama87I	CYCGRG	2 cut(s)	521, 1500
Aor13HI	TCCGGA	2 cut(s)	2167, 2269
ApeKI	GCWGC	8 cut(s)	291, 562, 793, 1244, 2159, 2182, 2231, 2285
ApoI	RAATTY	5 cut(s)	226, 367, 400, 760, 775
ArsI	GACNNNNNNTTYG	2 cut(s)	2230, 2262
AspLEI	GCGC	6 cut(s)	93, 291, 562, 567, 613, 1707
AspS9I	GGNCC	8 cut(s)	175, 857, 965, 1061, 1204, 1496, 1511, 2202
AsuC2I	CCSGG	3 cut(s)	251, 586, 951
AsuHPI	GGTGA	5 cut(s)	814, 833, 1202, 1205, 2298
AsuII	TTCGAA	1 cut(s)	758
AvaI	CYCGRG	2 cut(s)	521, 1500
AvaII	GGWCC	4 cut(s)	175, 965, 1204, 1511
BaeGI	GKGCMC	1 cut(s)	483
BaeI	ACNNNNGTAYC	2 cut(s)	1947, 1980
BalI	TGGCCA	1 cut(s)	1881
BanI	GGYRCC	1 cut(s)	2275
BbsI	GAAGAC	2 cut(s)	1163, 1439
Bbv12I	GWGCWC	1 cut(s)	979
BbvCI	CCTCAGC	1 cut(s)	614
BbvI	GCAGC	8 cut(s)	303, 549, 805, 1231, 2146, 2194, 2218, 2272
BceAI	ACGGC	3 cut(s)	798, 1299, 1977
BcgI	CGANNNNNNTGC	2 cut(s)	2210, 2244
BciT130I	CCWGG	3 cut(s)	440, 936, 2200
BciVI	GTATCC	2 cut(s)	1799, 2022
BcnI	CCSGG	3 cut(s)	251, 586, 951
BcoDI	GTCTC	8 cut(s)	18, 90, 309, 368, 1226, 1392, 1483, 1979
BfmI	CTRYAG	2 cut(s)	1239, 2262
BfoI	RGCGCY	2 cut(s)	563, 614
BfuAI	ACCTGC	1 cut(s)	2269
BfuI	GTATCC	2 cut(s)	1799, 2022
BglII	AGATCT	1 cut(s)	1504
Bme1390I	CCNGG	6 cut(s)	251, 440, 586, 936, 951, 2200
Bme18I	GGWCC	4 cut(s)	175, 965, 1204, 1511
BmeRI	GACNNNNNGTC	1 cut(s)	1737
BmeT110I	CYCGRG	2 cut(s)	521, 1500
BmgBI	CACGTC	2 cut(s)	1437, 1766
BmgT120I	GGNCC	8 cut(s)	175, 857, 965, 1061, 1204, 1496, 1511, 2202
BmiI	GGNNCC	6 cut(s)	966, 1062, 1497, 1513, 1932, 2277
BmrFI	CCNGG	6 cut(s)	251, 440, 586, 936, 951, 2200
BmsI	GCATC	1 cut(s)	54
BoxI	GACNNNNGTC	1 cut(s)	1314
BpiI	GAAGAC	2 cut(s)	1163, 1439
BpmI	CTGGAG	2 cut(s)	416, 2042
Bpu10I	CCTNAGC	2 cut(s)	309, 614
Bpu14I	TTCGAA	1 cut(s)	758
BpuEI	CTTGAG	1 cut(s)	155
BpuMI	CCSGG	3 cut(s)	251, 586, 951
BsaWI	WCCGGW	4 cut(s)	702, 914, 2167, 2269
BsaXI	ACNNNNNCTCC	2 cut(s)	249, 279
Bsc4I	CCNNNNNNNGG	5 cut(s)	444, 445, 941, 2199, 2241
Bse118I	RCCGGY	3 cut(s)	41, 1215, 2327
Bse1I	ACTGG	6 cut(s)	399, 1192, 1765, 1882, 1889, 2309
Bse3DI	GCAATG	3 cut(s)	1142, 1724, 1776
BseAI	TCCGGA	2 cut(s)	2167, 2269
BseBI	CCWGG	3 cut(s)	440, 936, 2200
BseLI	CCNNNNNNNGG	5 cut(s)	444, 445, 941, 2199, 2241
BseMI	GCAATG	3 cut(s)	1142, 1724, 1776
BseMII	CTCAG	6 cut(s)	101, 300, 605, 1545, 2102, 2268
BseNI	ACTGG	6 cut(s)	399, 1192, 1765, 1882, 1889, 2309
BseRI	GAGGAG	8 cut(s)	101, 207, 563, 591, 644, 668, 1208, 1835
BseSI	GKGCMC	1 cut(s)	483
BseX3I	CGGCCG	1 cut(s)	811
BseXI	GCAGC	8 cut(s)	303, 549, 805, 1231, 2146, 2194, 2218, 2272
BseYI	CCCAGC	2 cut(s)	99, 285
BsgI	GTGCAG	1 cut(s)	2201
Bsh1236I	CGCG	1 cut(s)	567
Bsh1285I	CGRYCG	3 cut(s)	196, 255, 814
BshNI	GGYRCC	1 cut(s)	2275
BsiEI	CGRYCG	3 cut(s)	196, 255, 814
BsiHKAI	GWGCWC	1 cut(s)	979
BsiHKCI	CYCGRG	2 cut(s)	521, 1500
BslFI	GGGAC	6 cut(s)	122, 134, 421, 1497, 1670, 1696
BslI	CCNNNNNNNGG	5 cut(s)	444, 445, 941, 2199, 2241
BsmAI	GTCTC	8 cut(s)	18, 90, 309, 368, 1226, 1392, 1483, 1979
BsmBI	CGTCTC	2 cut(s)	18, 309
BsmFI	GGGAC	6 cut(s)	122, 134, 421, 1497, 1670, 1696
BsmI	GAATGC	1 cut(s)	1014
BsoBI	CYCGRG	2 cut(s)	521, 1500
Bsp119I	TTCGAA	1 cut(s)	758
Bsp1286I	GDGCHC	2 cut(s)	483, 979
Bsp13I	TCCGGA	2 cut(s)	2167, 2269
Bsp143I	GATC	4 cut(s)	160, 1462, 1504, 1645
Bsp19I	CCATGG	2 cut(s)	54, 1652
BspCNI	CTCAG	6 cut(s)	100, 301, 606, 1546, 2103, 2267
BspEI	TCCGGA	2 cut(s)	2167, 2269
BspFNI	CGCG	1 cut(s)	567
BspLI	GGNNCC	6 cut(s)	966, 1062, 1497, 1513, 1932, 2277
BspMAI	CTGCAG	1 cut(s)	2266
BspMI	ACCTGC	1 cut(s)	2269
BspPI	GGATC	2 cut(s)	1457, 1640
BspT104I	TTCGAA	1 cut(s)	758
BspT107I	GGYRCC	1 cut(s)	2275
BsrBI	CCGCTC	1 cut(s)	263
BsrDI	GCAATG	3 cut(s)	1142, 1724, 1776
BsrFI	RCCGGY	3 cut(s)	41, 1215, 2327
BsrI	ACTGG	6 cut(s)	399, 1192, 1765, 1882, 1889, 2309
BssAI	RCCGGY	3 cut(s)	41, 1215, 2327
BssMI	GATC	4 cut(s)	160, 1462, 1504, 1645
BssT1I	CCWWGG	4 cut(s)	54, 968, 1652, 2036
Bst2UI	CCWGG	3 cut(s)	440, 936, 2200
Bst4CI	ACNGT	6 cut(s)	303, 1403, 1550, 1578, 1589, 2058
Bst6I	CTCTTC	1 cut(s)	1110
BstAPI	GCANNNNNTGC	1 cut(s)	2282
BstBI	TTCGAA	1 cut(s)	758
BstC8I	GCNNGC	7 cut(s)	43, 467, 737, 2065, 2069, 2141, 2145
BstDEI	CTNAG	7 cut(s)	87, 309, 614, 1554, 1936, 2111, 2254
BstDSI	CCRYGG	3 cut(s)	54, 814, 1652
BstFNI	CGCG	1 cut(s)	567
BstH2I	RGCGCY	2 cut(s)	563, 614
BstHHI	GCGC	6 cut(s)	93, 291, 562, 567, 613, 1707
BstKTI	GATC	4 cut(s)	163, 1465, 1507, 1648
BstMAI	GTCTC	8 cut(s)	18, 90, 309, 368, 1226, 1392, 1483, 1979
BstMBI	GATC	4 cut(s)	160, 1462, 1504, 1645
BstMCI	CGRYCG	3 cut(s)	196, 255, 814
BstMWI	GCNNNNNNNGC	5 cut(s)	38, 455, 596, 1244, 2282
BstNI	CCWGG	3 cut(s)	440, 936, 2200
BstNSI	RCATGY	3 cut(s)	886, 913, 2071
BstPAI	GACNNNNGTC	1 cut(s)	1314
BstSCI	CCNGG	6 cut(s)	249, 438, 584, 934, 949, 2198
BstSFI	CTRYAG	2 cut(s)	1239, 2262
BstSLI	GKGCMC	1 cut(s)	483
BstUI	CGCG	1 cut(s)	567
BstV1I	GCAGC	8 cut(s)	303, 549, 805, 1231, 2146, 2194, 2218, 2272
BstV2I	GAAGAC	2 cut(s)	1163, 1439
BstX2I	RGATCY	2 cut(s)	1504, 1645
BstYI	RGATCY	2 cut(s)	1504, 1645
BstZI	CGGCCG	1 cut(s)	811
BsuI	GTATCC	2 cut(s)	1799, 2022
BtgI	CCRYGG	3 cut(s)	54, 814, 1652
BtrI	CACGTC	2 cut(s)	1437, 1766
BtsIMutI	CAGTG	5 cut(s)	1098, 1583, 1758, 1882, 2316
BveI	ACCTGC	1 cut(s)	2269
Cac8I	GCNNGC	7 cut(s)	43, 467, 737, 2065, 2069, 2141, 2145
CaiI	CAGNNNCTG	1 cut(s)	2261
CfoI	GCGC	6 cut(s)	93, 291, 562, 567, 613, 1707
Cfr10I	RCCGGY	3 cut(s)	41, 1215, 2327
Cfr13I	GGNCC	8 cut(s)	175, 857, 965, 1061, 1204, 1496, 1511, 2202
Csp6I	GTAC	1 cut(s)	1334
CspCI	CAANNNNNGTGG	4 cut(s)	866, 901, 1559, 1594
CviAII	CATG	9 cut(s)	55, 883, 910, 1000, 1429, 1486, 1653, 2068, 2081
CviQI	GTAC	1 cut(s)	1334
DdeI	CTNAG	7 cut(s)	87, 309, 614, 1554, 1936, 2111, 2254
DpnI	GATC	4 cut(s)	162, 1464, 1506, 1647
DpnII	GATC	4 cut(s)	160, 1462, 1504, 1645
DriI	GACNNNNNGTC	1 cut(s)	1737
EaeI	YGGCCR	4 cut(s)	811, 1217, 1879, 2325
EagI	CGGCCG	1 cut(s)	811
Eam1104I	CTCTTC	1 cut(s)	1110
Eam1105I	GACNNNNNGTC	1 cut(s)	1737
EarI	CTCTTC	1 cut(s)	1110
EciI	GGCGGA	3 cut(s)	36, 172, 1888
EclXI	CGGCCG	1 cut(s)	811
Eco130I	CCWWGG	4 cut(s)	54, 968, 1652, 2036
Eco147I	AGGCCT	2 cut(s)	1531, 2139
Eco47I	GGWCC	4 cut(s)	175, 965, 1204, 1511
Eco52I	CGGCCG	1 cut(s)	811
Eco57I	CTGAAG	2 cut(s)	1148, 2313
Eco88I	CYCGRG	2 cut(s)	521, 1500
EcoO109I	RGGNCCY	4 cut(s)	175, 857, 1496, 2202
EcoRI	GAATTC	1 cut(s)	367
EcoRII	CCWGG	3 cut(s)	438, 934, 2198
EcoT14I	CCWWGG	4 cut(s)	54, 968, 1652, 2036
EcoT22I	ATGCAT	1 cut(s)	1044
ErhI	CCWWGG	4 cut(s)	54, 968, 1652, 2036
Esp3I	CGTCTC	2 cut(s)	18, 309
FaeI	CATG	9 cut(s)	58, 886, 913, 1003, 1432, 1489, 1656, 2071, 2084
FaqI	GGGAC	6 cut(s)	122, 134, 421, 1497, 1670, 1696
FatI	CATG	9 cut(s)	54, 882, 909, 999, 1428, 1485, 1652, 2067, 2080
FauI	CCCGC	1 cut(s)	268
FauNDI	CATATG	1 cut(s)	1665
FblI	GTMKAC	1 cut(s)	2220
FspI	TGCGCA	1 cut(s)	1706
GlaI	GCGC	6 cut(s)	92, 290, 561, 566, 612, 1706
GsaI	CCCAGC	2 cut(s)	103, 289
GsuI	CTGGAG	2 cut(s)	416, 2042
HaeII	RGCGCY	2 cut(s)	563, 614
HhaI	GCGC	6 cut(s)	93, 291, 562, 567, 613, 1707
Hin1II	CATG	9 cut(s)	58, 886, 913, 1003, 1432, 1489, 1656, 2071, 2084
Hin6I	GCGC	6 cut(s)	91, 289, 560, 565, 611, 1705
HinP1I	GCGC	6 cut(s)	91, 289, 560, 565, 611, 1705
HincII	GTYRAC	2 cut(s)	1571, 2221
HindII	GTYRAC	2 cut(s)	1571, 2221
HindIII	AAGCTT	1 cut(s)	347
HphI	GGTGA	5 cut(s)	814, 833, 1202, 1205, 2298
Hpy166II	GTNNAC	5 cut(s)	944, 1271, 1450, 1571, 2221
Hpy188III	TCNNGA	7 cut(s)	308, 523, 752, 1412, 1502, 2168, 2270
Hpy8I	GTNNAC	5 cut(s)	944, 1271, 1450, 1571, 2221
Hpy99I	CGWCG	2 cut(s)	505, 1320
HpyCH4III	ACNGT	6 cut(s)	303, 1403, 1550, 1578, 1589, 2058
HpyCH4IV	ACGT	3 cut(s)	1436, 1537, 1765
HpyF10VI	GCNNNNNNNGC	5 cut(s)	38, 455, 596, 1244, 2282
HpyF3I	CTNAG	7 cut(s)	87, 309, 614, 1554, 1936, 2111, 2254
HpySE526I	ACGT	3 cut(s)	1436, 1537, 1765
Hsp92II	CATG	9 cut(s)	58, 886, 913, 1003, 1432, 1489, 1656, 2071, 2084
HspAI	GCGC	6 cut(s)	91, 289, 560, 565, 611, 1705
Kpn2I	TCCGGA	2 cut(s)	2167, 2269
KroI	GCCGGC	1 cut(s)	41
KroNI	GCCGGC	1 cut(s)	43
Kzo9I	GATC	4 cut(s)	160, 1462, 1504, 1645
LmnI	GCTCC	3 cut(s)	982, 1774, 1903
Lsp1109I	GCAGC	8 cut(s)	303, 549, 805, 1231, 2146, 2194, 2218, 2272
LweI	GCATC	1 cut(s)	54
MaeII	ACGT	3 cut(s)	1436, 1537, 1765
MaeIII	GTNAC	4 cut(s)	802, 1424, 1756, 2094
MalI	GATC	4 cut(s)	162, 1464, 1506, 1647
MbiI	CCGCTC	1 cut(s)	263
MboI	GATC	4 cut(s)	160, 1462, 1504, 1645
MboII	GAAGA	3 cut(s)	1127, 1168, 1444
MfeI	CAATTG	2 cut(s)	330, 1274
MflI	RGATCY	2 cut(s)	1504, 1645
MhlI	GDGCHC	2 cut(s)	483, 979
MlsI	TGGCCA	1 cut(s)	1881
MluNI	TGGCCA	1 cut(s)	1881
MlyI	GAGTC	9 cut(s)	92, 491, 590, 700, 757, 790, 796, 2216, 2254
MmeI	TCCRAC	6 cut(s)	233, 606, 630, 1490, 1876, 1897
Mox20I	TGGCCA	1 cut(s)	1881
Mph1103I	ATGCAT	1 cut(s)	1044
MroI	TCCGGA	2 cut(s)	2167, 2269
MroNI	GCCGGC	1 cut(s)	41
MscI	TGGCCA	1 cut(s)	1881
MseI	TTAA	5 cut(s)	1298, 1526, 1584, 1713, 1890
MslI	CAYNNNNRTG	4 cut(s)	887, 1383, 1490, 1664
Msp20I	TGGCCA	1 cut(s)	1881
MspR9I	CCNGG	6 cut(s)	251, 440, 586, 936, 951, 2200
MteI	GCGCNGCGC	1 cut(s)	563
MunI	CAATTG	2 cut(s)	330, 1274
Mva1269I	GAATGC	1 cut(s)	1014
MvaI	CCWGG	3 cut(s)	440, 936, 2200
MvnI	CGCG	1 cut(s)	567
MwoI	GCNNNNNNNGC	5 cut(s)	38, 455, 596, 1244, 2282
NaeI	GCCGGC	1 cut(s)	43
NciI	CCSGG	3 cut(s)	251, 586, 951
NcoI	CCATGG	2 cut(s)	54, 1652
NdeI	CATATG	1 cut(s)	1665
NdeII	GATC	4 cut(s)	160, 1462, 1504, 1645
NgoMIV	GCCGGC	1 cut(s)	41
NlaIII	CATG	9 cut(s)	58, 886, 913, 1003, 1432, 1489, 1656, 2071, 2084
NlaIV	GGNNCC	6 cut(s)	966, 1062, 1497, 1513, 1932, 2277
NmeAIII	GCCGAG	2 cut(s)	688, 1999
NmuCI	GTSAC	4 cut(s)	802, 1424, 1756, 2094
NsbI	TGCGCA	1 cut(s)	1706
NsiI	ATGCAT	1 cut(s)	1044
NspI	RCATGY	3 cut(s)	886, 913, 2071
NspV	TTCGAA	1 cut(s)	758
PaeI	GCATGC	1 cut(s)	2071
PaeR7I	CTCGAG	2 cut(s)	521, 1500
PasI	CCCWGGG	1 cut(s)	935
PceI	AGGCCT	2 cut(s)	1531, 2139
PciI	ACATGT	2 cut(s)	882, 909
PctI	GAATGC	1 cut(s)	1014
PdiI	GCCGGC	1 cut(s)	43
PfeI	GAWTC	3 cut(s)	427, 755, 2151
PleI	GAGTC	9 cut(s)	91, 491, 589, 700, 756, 789, 795, 2216, 2253
PpsI	GAGTC	9 cut(s)	91, 491, 589, 700, 756, 789, 795, 2216, 2253
PpuMI	RGGWCCY	1 cut(s)	175
PscI	ACATGT	2 cut(s)	882, 909
PshAI	GACNNNNGTC	1 cut(s)	1314
Psp5II	RGGWCCY	1 cut(s)	175
Psp6I	CCWGG	3 cut(s)	438, 934, 2198
PspFI	CCCAGC	2 cut(s)	99, 285
PspGI	CCWGG	3 cut(s)	438, 934, 2198
PspN4I	GGNNCC	6 cut(s)	966, 1062, 1497, 1513, 1932, 2277
PspPI	GGNCC	8 cut(s)	175, 857, 965, 1061, 1204, 1496, 1511, 2202
PspPPI	RGGWCCY	1 cut(s)	175
PstI	CTGCAG	1 cut(s)	2266
PstNI	CAGNNNCTG	1 cut(s)	2261
PsuI	RGATCY	2 cut(s)	1504, 1645
RsaI	GTAC	1 cut(s)	1335
RsaNI	GTAC	1 cut(s)	1334
RseI	CAYNNNNRTG	4 cut(s)	887, 1383, 1490, 1664
SalI	GTCGAC	1 cut(s)	2219
SaqAI	TTAA	5 cut(s)	1298, 1526, 1584, 1713, 1890
Sau3AI	GATC	4 cut(s)	160, 1462, 1504, 1645
Sau96I	GGNCC	8 cut(s)	175, 857, 965, 1061, 1204, 1496, 1511, 2202
SchI	GAGTC	9 cut(s)	92, 491, 590, 700, 757, 790, 796, 2216, 2254
ScrFI	CCNGG	6 cut(s)	251, 440, 586, 936, 951, 2200
SduI	GDGCHC	2 cut(s)	483, 979
SfaNI	GCATC	1 cut(s)	54
SfcI	CTRYAG	2 cut(s)	1239, 2262
Sfr274I	CTCGAG	2 cut(s)	521, 1500
SfuI	TTCGAA	1 cut(s)	758
SinI	GGWCC	4 cut(s)	175, 965, 1204, 1511
SlaI	CTCGAG	2 cut(s)	521, 1500
SmiMI	CAYNNNNRTG	4 cut(s)	887, 1383, 1490, 1664
SmlI	CTYRAG	3 cut(s)	170, 521, 1500
SmoI	CTYRAG	3 cut(s)	170, 521, 1500
SphI	GCATGC	1 cut(s)	2071
SseBI	AGGCCT	2 cut(s)	1531, 2139
SspI	AATATT	1 cut(s)	1951
StuI	AGGCCT	2 cut(s)	1531, 2139
StyD4I	CCNGG	6 cut(s)	249, 438, 584, 934, 949, 2198
StyI	CCWWGG	4 cut(s)	54, 968, 1652, 2036
TaaI	ACNGT	6 cut(s)	303, 1403, 1550, 1578, 1589, 2058
TaiI	ACGT	3 cut(s)	1439, 1540, 1768
TaqII	GACCGA	2 cut(s)	210, 1499
TauI	GCSGC	4 cut(s)	297, 560, 813, 1108
TfiI	GAWTC	3 cut(s)	427, 755, 2151
Tru1I	TTAA	5 cut(s)	1298, 1526, 1584, 1713, 1890
Tru9I	TTAA	5 cut(s)	1298, 1526, 1584, 1713, 1890
TscAI	CASTG	5 cut(s)	1098, 1583, 1765, 1889, 2316
TseFI	GTSAC	4 cut(s)	802, 1424, 1756, 2094
TseI	GCWGC	8 cut(s)	291, 562, 793, 1244, 2159, 2182, 2231, 2285
Tsp45I	GTSAC	4 cut(s)	802, 1424, 1756, 2094
TspDTI	ATGAA	9 cut(s)	731, 905, 945, 1137, 1343, 1445, 1652, 1713, 2148
TspGWI	ACGGA	2 cut(s)	1321, 1748
TspRI	CASTG	5 cut(s)	1098, 1583, 1765, 1889, 2316
VpaK11BI	GGWCC	4 cut(s)	175, 965, 1204, 1511
XapI	RAATTY	5 cut(s)	226, 367, 400, 760, 775
XbaI	TCTAGA	1 cut(s)	1411
XceI	RCATGY	3 cut(s)	886, 913, 2071
XcmI	CCANNNNNNNNNTGG	1 cut(s)	418
XhoI	CTCGAG	2 cut(s)	521, 1500
XmiI	GTMKAC	1 cut(s)	2220
Zsp2I	ATGCAT	1 cut(s)	1044

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.