Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0011095

Physical Location & Seq

Genomic Coordinates Forward (+)

12479374 .. 12484983

Gene Structure 5610 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G128200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2379 bp

ATGGAAACCCAATCAGACGGCGAAGCCTCATCCATAGCCACCATCAGAAACAGGAGCCAACAGCTCGAAGCTCGAATGGAGTCTCAGCGCACCACCCAGCTAGAACTCCTCTCTTATCTCCAAACCCAAGTCGTCCCCGCCATTGTTCCCACCATTGATCTCTCTCTCAAGGTCCTCTCGGCCTTCAATGGCCGACCTTTCACTCCCACACCTTCTCTCCCGGACCCTAAACCCAACCCCAACAAACTAATTGAACCAATCGAACCCACTCGCCCTTTAACCCCAGAACCCCAACGCAGTCGCCTCCCTTCTCCTGAACCCAAACCCACAAACCCAATTACCGAAATTCCGAAGCTTTCTCCGAATCGGGCGAATCCGGAGCCGACTGACCTACCCGAACCCGAGAACTTCAGCCCCATGGATGAGATGGGAAACCCATTGTCTGTGGTTCGGGCTATGGTTGCGGTTTGCTTGCTTGAAAGGGTGCCCTTTTCGCGGGTTGACTCGTCGGCGATTTTGAGAAAACTTGAGGGCGACCAGAATGCGACTTCGGAGGAGAAGGCGGCGCTGCGAGAGCTCGGAGGAGAGTCCGGGGCGATATTGGCGGTGGAGATGGCGTTGAGGTCAATGGCGGAAGAGAACGGTGGCGTTGAGTTGGAGGAGTTTGTGGTGAGTGGCAAGTCGAGAGTTATGGTTTTGGGGATTGACCGGACTCGGCTGATGAAGGAATTGCCTGAAAGCAAGCAGTTTCAGAGTCAAGATTCGAATTTGGTAGATGGGAATGGGAATTTGAATCAGAATCAGAGTCAGCAGCAAGTGGTGACTAATGGGGTTGATGGTAATGGTGGAGTGTTTGGAATGGGAGGGCCTGGTTCAAGGCCAATGCAGGACATGTGGATGGGACCTAATGATACCCATATGGCCGGTTTGCCGCCTATGTTTCCTGGGAGTGGACCGCCAGGTTCATTGATGGGTCCAAGGGGTGCTCCTAGTCCTAGAGTAATGGGCATGATGGGAATGTCTAGAGGGATGAGTGGTGTTCCTCCAATGCATAGAGCTGGTAGTTTGGGGCCAAATGCAACAATGGATAGCCCCAATTCGATGTCTCATAAGCCTAGGAGTGAAGAGGAGGAAATGAAGGATCTTGAGGCATTGTTGAATAAGAAGACTTTTAAGGAGTTACAAAAATCAAAAACTGGTGAGGAGCTTTTGGACCTGATTCACCGGCCAACTGCCAAGGAGACTGCTGTGGCTGCCAAGTTCAAGACTAAAGGTGGTTCACAATTGAAGGAATACTGCACATCCCTAACAAAAGAGGACTGCCGGCGCCAGTCTAATTCCTTACTTGCATGTGAGAAGGTTCATTTTAGGCGAATAATTGCTCCACATACCGATGTCAATTTAGGAGACTGCTCTTTTCTGGATACTTGTCGTCACATGAAGACATGCAAGTATGTACACTATGAGCTTGATCCAACACCAGATGTGTCTCACATGATGATGGGGGCTCCAGCTCTCAATCCCCATAAACCATTGAAGCCTCAGCGTGCTGAATATTGTTCTGAGGTTGAACTTGGTCAACCACAATGGATTAACTGTGATATCCGCAACTTTAGAATGGACATTCTAGGGCAATTTGGAGTAATAATGGCAGATCCACCGTGGGACATTCATATGGAATTGCCCTATGGGACAATGGCTGATGATGAAATGCGCAATCTTAATGTTCCCGCATTGCAGACAGATGGTCTGATTTTCCTTTGGGTCACTGGGCGTGCAATGGAGCTTGGGCGTGAATGTTTGGAACTTTGGGGATACAAGCGTATCGAGGAGCTAATTTGGGTAAAGACTAATCAACTTCAACGAATAATTAGAACAGGGCGGACTGGCCACTGGCTTAATCATAGCAAGGAGCATTGCCTTGTTGGAATAAAAGGGGAACCATTAGTAAATAGAAATATTGATACTGATGTCATTGTTGCCGAGGTTAGAGAGACAAGCCGTAAGCCAGATGAGATGTACCCTTTGCTGGAGAGGATAAGTCCAAGGACTAGAAAGCTGGAACTGTTTGCTCGCATGCACAATACTCATGCAGGGTGGATGTCACTCGGTAATCAACTGAGTGGTGTAAGATTGGTTGATGAAGGCCTGCGAGCACGATTTAAGGCTGCTTATCCGGATGTGGAGGTGCAGCCTGCTTCCCCACCCAGGCCCTCTGCTATGGAGGTAGACTCTAATGCTGCCCAAATGCGAAATCCATTTTCAGTAACAGAACCAAAGTCTACGGCCACACAATTTGCAGAGCCTGCAGTTCCAGATGCACCCTTTGCTGCTTCCGAAGTGAAGCCAACACCAGTTGACATTGACATGGTCGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001510 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008168 GO:0008173 GO:0008174 GO:0008757 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016071 GO:0016422 GO:0016556 GO:0016604 GO:0016607 GO:0016740 GO:0016741 GO:0031974 GO:0031981 GO:0032259 GO:0032991 GO:0034641 GO:0034708 GO:0036396 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045293 GO:0046483 GO:0070013 GO:0071704 GO:0080009 GO:0090304 GO:0140098 GO:1901360 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MT-A70

Protein Analysis

793

Amino Acids

87.68

Weight (kDa)

5.8

Isoelectric Point (pI)

51.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011095)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G10760
fragaria_vesca	FvH4_5g11050 FvH4_5g11050
malus_domestica	MD06G1116900.v1.1 MD14G1124400.v1.1
prunus_persica	Prupe.5G128200_v2.0.a1
pyrus_communis	pycom06g10900
rosa_chinensis	RchiOBHm_Chr7g0186271 RchiOBHm_Chr7g0186751
rosa_laevigata	RLG00000004819
rosa_multiflora	Rmu_sc0009734.1_g000004
rosa_roxburghii	Rroxscaffold_3G00267860
rosa_rugosa	Rorug06G0473000 Rorug06G0476300
rosa_samantha	Rh7AG064200 Rh7BG080700 Rh7CG083300 Rh7DG084200
rosa_wichuraiana	Rw7G006690 Rw7G007220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1715
AccB1I	GGYRCC	2 cut(s)	484, 1326
AccI	GTMKAC	2 cut(s)	2229, 2282
AccII	CGCG	1 cut(s)	496
AccIII	TCCGGA	2 cut(s)	376, 2176
AclWI	GGATC	3 cut(s)	1149, 1466, 1649
AcoI	YGGCCR	5 cut(s)	190, 921, 1226, 1888, 2286
AcsI	RAATTY	3 cut(s)	345, 766, 787
AcuI	CTGAAG	1 cut(s)	394
AcyI	GRCGYC	1 cut(s)	1327
AfaI	GTAC	2 cut(s)	1458, 2021
AfiI	CCNNNNNNNGG	4 cut(s)	495, 950, 2029, 2208
AflIII	ACRYGT	1 cut(s)	891
AhdI	GACNNNNNGTC	1 cut(s)	1746
AjnI	CCWGG	4 cut(s)	868, 943, 958, 2207
Alw21I	GWGCWC	3 cut(s)	579, 988, 2158
Alw26I	GTCTC	6 cut(s)	87, 1110, 1235, 1401, 1494, 1988
AlwI	GGATC	3 cut(s)	1149, 1466, 1649
AlwNI	CAGNNNCTG	1 cut(s)	2306
Ama87I	CYCGRG	1 cut(s)	401
Aor13HI	TCCGGA	2 cut(s)	376, 2176
ApeKI	GCWGC	7 cut(s)	568, 811, 1253, 2168, 2191, 2240, 2330
ApoI	RAATTY	3 cut(s)	345, 766, 787
AspA2I	CCTAGG	1 cut(s)	1115
AspLEI	GCGC	4 cut(s)	90, 568, 1329, 1716
AspS9I	GGNCC	9 cut(s)	172, 223, 866, 902, 953, 974, 1070, 1213, 2211
AsuC2I	CCSGG	2 cut(s)	221, 592
AsuHPI	GGTGA	4 cut(s)	682, 832, 1211, 1214
AsuII	TTCGAA	1 cut(s)	764
AvaI	CYCGRG	1 cut(s)	401
AvaII	GGWCC	6 cut(s)	172, 223, 902, 953, 974, 1213
AvrII	CCTAGG	1 cut(s)	1115
BaeGI	GKGCMC	1 cut(s)	489
BaeI	ACNNNNGTAYC	6 cut(s)	1807, 1807, 1840, 1840, 1956, 1989
BalI	TGGCCA	1 cut(s)	1890
BanI	GGYRCC	2 cut(s)	484, 1326
BanII	GRGCYC	2 cut(s)	579, 1510
BbsI	GAAGAC	2 cut(s)	1172, 1448
Bbv12I	GWGCWC	3 cut(s)	579, 988, 2158
BbvCI	CCTCAGC	1 cut(s)	1542
BbvI	GCAGC	7 cut(s)	555, 823, 1240, 2155, 2203, 2227, 2317
BceAI	ACGGC	3 cut(s)	34, 1986, 2301
BcgI	CGANNNNNNTGC	2 cut(s)	524, 558
BciT130I	CCWGG	4 cut(s)	870, 945, 960, 2209
BciVI	GTATCC	2 cut(s)	1417, 1808
BcnI	CCSGG	2 cut(s)	221, 592
BcoDI	GTCTC	6 cut(s)	87, 1110, 1235, 1401, 1494, 1988
BfaI	CTAG	7 cut(s)	101, 990, 996, 1023, 1116, 1628, 2052
BfmI	CTRYAG	1 cut(s)	2307
BfoI	RGCGCY	2 cut(s)	569, 1330
BfuI	GTATCC	2 cut(s)	1417, 1808
BisI	GCNGC	9 cut(s)	564, 569, 812, 932, 1254, 2169, 2192, 2241, 2331
BlnI	CCTAGG	1 cut(s)	1115
BlsI	GCNGC	9 cut(s)	565, 570, 813, 933, 1255, 2170, 2193, 2242, 2332
Bme1390I	CCNGG	6 cut(s)	221, 592, 870, 945, 960, 2209
Bme18I	GGWCC	6 cut(s)	172, 223, 902, 953, 974, 1213
BmeRI	GACNNNNNGTC	1 cut(s)	1746
BmeT110I	CYCGRG	1 cut(s)	401
BmgT120I	GGNCC	9 cut(s)	172, 223, 866, 902, 953, 974, 1070, 1213, 2211
BmrFI	CCNGG	6 cut(s)	221, 592, 870, 945, 960, 2209
BmrI	ACTGGG	1 cut(s)	1779
BmsI	GCATC	1 cut(s)	2308
BmuI	ACTGGG	1 cut(s)	1779
BpiI	GAAGAC	2 cut(s)	1172, 1448
BplI	GAGNNNNNCTC	2 cut(s)	2216, 2248
BpmI	CTGGAG	2 cut(s)	1494, 2051
Bpu10I	CCTNAGC	1 cut(s)	1542
Bpu14I	TTCGAA	1 cut(s)	764
BpuEI	CTTGAG	3 cut(s)	152, 548, 1166
BpuMI	CCSGG	2 cut(s)	221, 592
BsaHI	GRCGYC	1 cut(s)	1327
BsaWI	WCCGGW	3 cut(s)	376, 708, 2176
BsaXI	ACNNNNNCTCC	4 cut(s)	201, 231, 602, 632
Bsc4I	CCNNNNNNNGG	4 cut(s)	495, 950, 2029, 2208
Bse118I	RCCGGY	3 cut(s)	923, 1224, 1323
Bse1I	ACTGG	6 cut(s)	1201, 1330, 1774, 1891, 1898, 2354
Bse3DI	GCAATG	3 cut(s)	1733, 1785, 1915
BseAI	TCCGGA	2 cut(s)	376, 2176
BseBI	CCWGG	4 cut(s)	870, 945, 960, 2209
BseGI	GGATG	7 cut(s)	29, 427, 903, 1035, 1301, 2106, 2185
BseLI	CCNNNNNNNGG	4 cut(s)	495, 950, 2029, 2208
BseMI	GCAATG	3 cut(s)	1733, 1785, 1915
BseMII	CTCAG	4 cut(s)	98, 1554, 1556, 2111
BseNI	ACTGG	6 cut(s)	1201, 1330, 1774, 1891, 1898, 2354
BseRI	GAGGAG	7 cut(s)	98, 569, 597, 674, 1142, 1217, 1844
BseSI	GKGCMC	1 cut(s)	489
BseXI	GCAGC	7 cut(s)	555, 823, 1240, 2155, 2203, 2227, 2317
BseYI	CCCAGC	1 cut(s)	96
BsgI	GTGCAG	2 cut(s)	1282, 2210
Bsh1236I	CGCG	1 cut(s)	496
BshNI	GGYRCC	2 cut(s)	484, 1326
BsiHKAI	GWGCWC	3 cut(s)	579, 988, 2158
BsiHKCI	CYCGRG	1 cut(s)	401
BsiSI	CCGG	8 cut(s)	221, 377, 591, 709, 924, 1225, 1324, 2177
BslFI	GGGAC	4 cut(s)	119, 915, 1679, 1705
BslI	CCNNNNNNNGG	4 cut(s)	495, 950, 2029, 2208
BsmAI	GTCTC	6 cut(s)	87, 1110, 1235, 1401, 1494, 1988
BsmFI	GGGAC	4 cut(s)	119, 915, 1679, 1705
BsmI	GAATGC	1 cut(s)	547
BsoBI	CYCGRG	1 cut(s)	401
Bsp119I	TTCGAA	1 cut(s)	764
Bsp1286I	GDGCHC	5 cut(s)	489, 579, 988, 1510, 2158
Bsp13I	TCCGGA	2 cut(s)	376, 2176
Bsp1407I	TGTACA	1 cut(s)	1456
Bsp143I	GATC	4 cut(s)	157, 1141, 1471, 1654
Bsp19I	CCATGG	1 cut(s)	417
BspCNI	CTCAG	4 cut(s)	97, 1555, 1555, 2112
BspEI	TCCGGA	2 cut(s)	376, 2176
BspFNI	CGCG	1 cut(s)	496
BspMAI	CTGCAG	1 cut(s)	2311
BspPI	GGATC	3 cut(s)	1149, 1466, 1649
BspT104I	TTCGAA	1 cut(s)	764
BspT107I	GGYRCC	2 cut(s)	484, 1326
BsrDI	GCAATG	3 cut(s)	1733, 1785, 1915
BsrFI	RCCGGY	3 cut(s)	923, 1224, 1323
BsrGI	TGTACA	1 cut(s)	1456
BsrI	ACTGG	6 cut(s)	1201, 1330, 1774, 1891, 1898, 2354
BssAI	RCCGGY	3 cut(s)	923, 1224, 1323
BssMI	GATC	4 cut(s)	157, 1141, 1471, 1654
BssNI	GRCGYC	1 cut(s)	1327
BssT1I	CCWWGG	5 cut(s)	417, 977, 1115, 1236, 2045
Bst2UI	CCWGG	4 cut(s)	870, 945, 960, 2209
Bst4CI	ACNGT	4 cut(s)	644, 1598, 1662, 2067
Bst6I	CTCTTC	2 cut(s)	630, 1119
BstACI	GRCGYC	1 cut(s)	1327
BstAPI	GCANNNNNTGC	2 cut(s)	2306, 2327
BstAUI	TGTACA	1 cut(s)	1456
BstBI	TTCGAA	1 cut(s)	764
BstDEI	CTNAG	4 cut(s)	84, 1542, 1563, 2120
BstDSI	CCRYGG	2 cut(s)	417, 1661
BstF5I	GGATG	7 cut(s)	29, 427, 903, 1035, 1301, 2106, 2185
BstFNI	CGCG	1 cut(s)	496
BstH2I	RGCGCY	2 cut(s)	569, 1330
BstHHI	GCGC	4 cut(s)	90, 568, 1329, 1716
BstKTI	GATC	4 cut(s)	160, 1144, 1474, 1657
BstMAI	GTCTC	6 cut(s)	87, 1110, 1235, 1401, 1494, 1988
BstMBI	GATC	4 cut(s)	157, 1141, 1471, 1654
BstMWI	GCNNNNNNNGC	7 cut(s)	461, 493, 574, 602, 1253, 2306, 2327
BstNI	CCWGG	4 cut(s)	870, 945, 960, 2209
BstNSI	RCATGY	4 cut(s)	895, 1353, 1449, 2080
BstSCI	CCNGG	6 cut(s)	219, 590, 868, 943, 958, 2207
BstSFI	CTRYAG	1 cut(s)	2307
BstSLI	GKGCMC	1 cut(s)	489
BstUI	CGCG	1 cut(s)	496
BstV1I	GCAGC	7 cut(s)	555, 823, 1240, 2155, 2203, 2227, 2317
BstV2I	GAAGAC	2 cut(s)	1172, 1448
BstX2I	RGATCY	2 cut(s)	1141, 1654
BstYI	RGATCY	2 cut(s)	1141, 1654
BsuI	GTATCC	2 cut(s)	1417, 1808
BtgI	CCRYGG	2 cut(s)	417, 1661
BtsCI	GGATG	7 cut(s)	29, 427, 903, 1035, 1301, 2106, 2185
BtsIMutI	CAGTG	2 cut(s)	1767, 1891
CaiI	CAGNNNCTG	1 cut(s)	2306
CfoI	GCGC	4 cut(s)	90, 568, 1329, 1716
Cfr10I	RCCGGY	3 cut(s)	923, 1224, 1323
Cfr13I	GGNCC	9 cut(s)	172, 223, 866, 902, 953, 974, 1070, 1213, 2211
Csp6I	GTAC	2 cut(s)	1457, 2020
CspCI	CAANNNNNGTGG	2 cut(s)	2278, 2313
CviQI	GTAC	2 cut(s)	1457, 2020
DdeI	CTNAG	4 cut(s)	84, 1542, 1563, 2120
DinI	GGCGCC	1 cut(s)	1328
DpnI	GATC	4 cut(s)	159, 1143, 1473, 1656
DpnII	GATC	4 cut(s)	157, 1141, 1471, 1654
DriI	GACNNNNNGTC	1 cut(s)	1746
EaeI	YGGCCR	5 cut(s)	190, 921, 1226, 1888, 2286
Eam1104I	CTCTTC	2 cut(s)	630, 1119
Eam1105I	GACNNNNNGTC	1 cut(s)	1746
EarI	CTCTTC	2 cut(s)	630, 1119
EciI	GGCGGA	2 cut(s)	647, 1897
Ecl136II	GAGCTC	1 cut(s)	577
Eco130I	CCWWGG	5 cut(s)	417, 977, 1115, 1236, 2045
Eco147I	AGGCCT	1 cut(s)	2148
Eco24I	GRGCYC	2 cut(s)	579, 1510
Eco32I	GATATC	1 cut(s)	1603
Eco47I	GGWCC	6 cut(s)	172, 223, 902, 953, 974, 1213
Eco53kI	GAGCTC	1 cut(s)	577
Eco57I	CTGAAG	1 cut(s)	394
Eco88I	CYCGRG	1 cut(s)	401
EcoICRI	GAGCTC	1 cut(s)	577
EcoO109I	RGGNCCY	4 cut(s)	172, 866, 902, 2211
EcoRII	CCWGG	4 cut(s)	868, 943, 958, 2207
EcoRV	GATATC	1 cut(s)	1603
EcoT14I	CCWWGG	5 cut(s)	417, 977, 1115, 1236, 2045
EcoT22I	ATGCAT	1 cut(s)	1053
EcoT38I	GRGCYC	2 cut(s)	579, 1510
EgeI	GGCGCC	1 cut(s)	1328
EheI	GGCGCC	1 cut(s)	1328
ErhI	CCWWGG	5 cut(s)	417, 977, 1115, 1236, 2045
FaqI	GGGAC	4 cut(s)	119, 915, 1679, 1705
FauI	CCCGC	3 cut(s)	145, 489, 1738
FauNDI	CATATG	2 cut(s)	918, 1674
FblI	GTMKAC	2 cut(s)	2229, 2282
Fnu4HI	GCNGC	9 cut(s)	564, 569, 812, 932, 1254, 2169, 2192, 2241, 2331
FokI	GGATG	7 cut(s)	16, 434, 910, 1042, 1288, 2113, 2192
FriOI	GRGCYC	2 cut(s)	579, 1510
Fsp4HI	GCNGC	9 cut(s)	564, 569, 812, 932, 1254, 2169, 2192, 2241, 2331
FspBI	CTAG	7 cut(s)	101, 990, 996, 1023, 1116, 1628, 2052
FspI	TGCGCA	1 cut(s)	1715
GlaI	GCGC	4 cut(s)	89, 567, 1328, 1715
GluI	GCNGC	9 cut(s)	564, 569, 812, 932, 1254, 2169, 2192, 2241, 2331
GsaI	CCCAGC	1 cut(s)	100
GsuI	CTGGAG	2 cut(s)	1494, 2051
HaeII	RGCGCY	2 cut(s)	569, 1330
HapII	CCGG	8 cut(s)	221, 377, 591, 709, 924, 1225, 1324, 2177
HhaI	GCGC	4 cut(s)	90, 568, 1329, 1716
Hin1I	GRCGYC	1 cut(s)	1327
Hin6I	GCGC	4 cut(s)	88, 566, 1327, 1714
HinP1I	GCGC	4 cut(s)	88, 566, 1327, 1714
HincII	GTYRAC	3 cut(s)	502, 1580, 2359
HindII	GTYRAC	3 cut(s)	502, 1580, 2359
HindIII	AAGCTT	1 cut(s)	353
HpaII	CCGG	8 cut(s)	221, 377, 591, 709, 924, 1225, 1324, 2177
HphI	GGTGA	4 cut(s)	682, 832, 1211, 1214
Hpy166II	GTNNAC	8 cut(s)	502, 953, 1280, 1459, 1580, 2230, 2283, 2359
Hpy8I	GTNNAC	8 cut(s)	502, 953, 1280, 1459, 1580, 2230, 2283, 2359
Hpy99I	CGWCG	1 cut(s)	511
HpyAV	CCTTC	9 cut(s)	193, 222, 318, 553, 718, 1132, 1282, 1351, 2138
HpyCH4III	ACNGT	4 cut(s)	644, 1598, 1662, 2067
HpyF10VI	GCNNNNNNNGC	7 cut(s)	461, 493, 574, 602, 1253, 2306, 2327
HpyF3I	CTNAG	4 cut(s)	84, 1542, 1563, 2120
Hsp92I	GRCGYC	1 cut(s)	1327
HspAI	GCGC	4 cut(s)	88, 566, 1327, 1714
KasI	GGCGCC	1 cut(s)	1326
Kpn2I	TCCGGA	2 cut(s)	376, 2176
KroI	GCCGGC	1 cut(s)	1323
KroNI	GCCGGC	1 cut(s)	1325
Kzo9I	GATC	4 cut(s)	157, 1141, 1471, 1654
LmnI	GCTCC	9 cut(s)	54, 379, 991, 1204, 1387, 1513, 1783, 1831, 1912
Lsp1109I	GCAGC	7 cut(s)	555, 823, 1240, 2155, 2203, 2227, 2317
LweI	GCATC	1 cut(s)	2308
MaeI	CTAG	7 cut(s)	101, 990, 996, 1023, 1116, 1628, 2052
MaeIII	GTNAC	6 cut(s)	820, 1179, 1433, 1765, 2103, 2266
MalI	GATC	4 cut(s)	159, 1143, 1473, 1656
MboI	GATC	4 cut(s)	157, 1141, 1471, 1654
MboII	GAAGA	4 cut(s)	647, 1136, 1177, 1453
MfeI	CAATTG	1 cut(s)	1283
MflI	RGATCY	2 cut(s)	1141, 1654
MhlI	GDGCHC	5 cut(s)	489, 579, 988, 1510, 2158
MlsI	TGGCCA	1 cut(s)	1890
MluNI	TGGCCA	1 cut(s)	1890
Mly113I	GGCGCC	1 cut(s)	1327
MlyI	GAGTC	7 cut(s)	89, 497, 596, 706, 763, 814, 2225
MmeI	TCCRAC	3 cut(s)	636, 1499, 1906
Mox20I	TGGCCA	1 cut(s)	1890
Mph1103I	ATGCAT	1 cut(s)	1053
MroI	TCCGGA	2 cut(s)	376, 2176
MroNI	GCCGGC	1 cut(s)	1323
MscI	TGGCCA	1 cut(s)	1890
MseI	TTAA	6 cut(s)	278, 1173, 1593, 1722, 1899, 2163
MslI	CAYNNNNRTG	5 cut(s)	896, 1392, 1499, 1673, 2366
Msp20I	TGGCCA	1 cut(s)	1890
MspI	CCGG	8 cut(s)	221, 377, 591, 709, 924, 1225, 1324, 2177
MspR9I	CCNGG	6 cut(s)	221, 592, 870, 945, 960, 2209
MunI	CAATTG	1 cut(s)	1283
Mva1269I	GAATGC	1 cut(s)	547
MvaI	CCWGG	4 cut(s)	870, 945, 960, 2209
MvnI	CGCG	1 cut(s)	496
MwoI	GCNNNNNNNGC	7 cut(s)	461, 493, 574, 602, 1253, 2306, 2327
NaeI	GCCGGC	1 cut(s)	1325
NarI	GGCGCC	1 cut(s)	1327
NciI	CCSGG	2 cut(s)	221, 592
NcoI	CCATGG	1 cut(s)	417
NdeI	CATATG	2 cut(s)	918, 1674
NdeII	GATC	4 cut(s)	157, 1141, 1471, 1654
NgoMIV	GCCGGC	1 cut(s)	1323
NmeAIII	GCCGAG	3 cut(s)	158, 694, 2008
NmuCI	GTSAC	4 cut(s)	820, 1433, 1765, 2103
NsbI	TGCGCA	1 cut(s)	1715
NsiI	ATGCAT	1 cut(s)	1053
NspI	RCATGY	4 cut(s)	895, 1353, 1449, 2080
NspV	TTCGAA	1 cut(s)	764
PaeI	GCATGC	1 cut(s)	2080
PceI	AGGCCT	1 cut(s)	2148
PciI	ACATGT	1 cut(s)	891
PctI	GAATGC	1 cut(s)	547
PdiI	GCCGGC	1 cut(s)	1325
PfeI	GAWTC	6 cut(s)	364, 373, 761, 793, 799, 1219
PflFI	GACNNNGTC	1 cut(s)	2369
PfoI	TCCNGGA	1 cut(s)	219
PkrI	GCNGC	9 cut(s)	565, 570, 813, 933, 1255, 2170, 2193, 2242, 2332
PleI	GAGTC	7 cut(s)	88, 497, 595, 706, 762, 813, 2225
PluTI	GGCGCC	1 cut(s)	1330
PpsI	GAGTC	7 cut(s)	88, 497, 595, 706, 762, 813, 2225
PpuMI	RGGWCCY	2 cut(s)	172, 902
PscI	ACATGT	1 cut(s)	891
Psp124BI	GAGCTC	1 cut(s)	579
Psp5II	RGGWCCY	2 cut(s)	172, 902
Psp6I	CCWGG	4 cut(s)	868, 943, 958, 2207
PspFI	CCCAGC	1 cut(s)	96
PspGI	CCWGG	4 cut(s)	868, 943, 958, 2207
PspPI	GGNCC	9 cut(s)	172, 223, 866, 902, 953, 974, 1070, 1213, 2211
PspPPI	RGGWCCY	2 cut(s)	172, 902
PstI	CTGCAG	1 cut(s)	2311
PstNI	CAGNNNCTG	1 cut(s)	2306
PsuI	RGATCY	2 cut(s)	1141, 1654
PsyI	GACNNNGTC	1 cut(s)	2369
RsaI	GTAC	2 cut(s)	1458, 2021
RsaNI	GTAC	2 cut(s)	1457, 2020
RseI	CAYNNNNRTG	5 cut(s)	896, 1392, 1499, 1673, 2366
SacI	GAGCTC	1 cut(s)	579
SaqAI	TTAA	6 cut(s)	278, 1173, 1593, 1722, 1899, 2163
SatI	GCNGC	9 cut(s)	564, 569, 812, 932, 1254, 2169, 2192, 2241, 2331
Sau3AI	GATC	4 cut(s)	157, 1141, 1471, 1654
Sau96I	GGNCC	9 cut(s)	172, 223, 866, 902, 953, 974, 1070, 1213, 2211
SchI	GAGTC	7 cut(s)	89, 497, 596, 706, 763, 814, 2225
ScrFI	CCNGG	6 cut(s)	221, 592, 870, 945, 960, 2209
SduI	GDGCHC	5 cut(s)	489, 579, 988, 1510, 2158
SfaNI	GCATC	1 cut(s)	2308
SfcI	CTRYAG	1 cut(s)	2307
SfoI	GGCGCC	1 cut(s)	1328
SfuI	TTCGAA	1 cut(s)	764
SinI	GGWCC	6 cut(s)	172, 223, 902, 953, 974, 1213
SmiMI	CAYNNNNRTG	5 cut(s)	896, 1392, 1499, 1673, 2366
SmlI	CTYRAG	3 cut(s)	167, 527, 1145
SmoI	CTYRAG	3 cut(s)	167, 527, 1145
SphI	GCATGC	1 cut(s)	2080
SseBI	AGGCCT	1 cut(s)	2148
SspDI	GGCGCC	1 cut(s)	1326
SspI	AATATT	2 cut(s)	1556, 1960
SspMI	CTAG	7 cut(s)	101, 990, 996, 1023, 1116, 1628, 2052
SstI	GAGCTC	1 cut(s)	579
StuI	AGGCCT	1 cut(s)	2148
StyD4I	CCNGG	6 cut(s)	219, 590, 868, 943, 958, 2207
StyI	CCWWGG	5 cut(s)	417, 977, 1115, 1236, 2045
TaaI	ACNGT	4 cut(s)	644, 1598, 1662, 2067
TaqI	TCGA	7 cut(s)	66, 73, 261, 683, 764, 1100, 1827
TatI	WGTACW	1 cut(s)	1456
TauI	GCSGC	2 cut(s)	566, 934
TfiI	GAWTC	6 cut(s)	364, 373, 761, 793, 799, 1219
Tru1I	TTAA	6 cut(s)	278, 1173, 1593, 1722, 1899, 2163
Tru9I	TTAA	6 cut(s)	278, 1173, 1593, 1722, 1899, 2163
TscAI	CASTG	2 cut(s)	1774, 1898
TseFI	GTSAC	4 cut(s)	820, 1433, 1765, 2103
TseI	GCWGC	7 cut(s)	568, 811, 1253, 2168, 2191, 2240, 2330
Tsp45I	GTSAC	4 cut(s)	820, 1433, 1765, 2103
TspDTI	ATGAA	8 cut(s)	737, 954, 1151, 1352, 1454, 1661, 1722, 2157
TspRI	CASTG	2 cut(s)	1774, 1898
Tth111I	GACNNNGTC	1 cut(s)	2369
VpaK11BI	GGWCC	6 cut(s)	172, 223, 902, 953, 974, 1213
XapI	RAATTY	3 cut(s)	345, 766, 787
XbaI	TCTAGA	1 cut(s)	1022
XceI	RCATGY	4 cut(s)	895, 1353, 1449, 2080
XcmI	CCANNNNNNNNNTGG	1 cut(s)	424
XmaJI	CCTAGG	1 cut(s)	1115
XmiI	GTMKAC	2 cut(s)	2229, 2282
XspI	CTAG	7 cut(s)	101, 990, 996, 1023, 1116, 1628, 2052
Zsp2I	ATGCAT	1 cut(s)	1053

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.