Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0011095

Physical Location & Seq

Genomic Coordinates Forward (+)

16118861 .. 16123795

Gene Structure 4935 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g10900.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2448 bp

ATGAGACGGGGATACGTTAGTTTGCTTCGGCTGCTTCTTCTAAAACCTCACTCAAATCTCAGTCGCTCGCACAGAGAAAACCACAACAAATCCATAGCACCAGCACCAGCACCAGCAATGGAGACCCAATCGGAAGGTGGAGGAGGCAAATCCATGGCCAGCATCCGAACCATGGCTCAACAGCTCGAAGCTCGAATAGAGTCTCAACGCACCACCCAGTTCGAACTCCTCTCTTACCTCCAATCCCAAATCGGCCCCACCATCGTCCCCACCATTGATCTCTCTCTCAAGGTTCTCTCCGCCTTCAACGACCGCCCTTTTACTCCCACGCCTCCTCTTCCCGACCCCAAACCAAACCCCAGAAAGCCGATCGAACCCACTCTCCCTTCGACCCCAGAACCCCACCGCAGCCGCCTCCCGTCCCCTGAGCCGAAACCCACTAACCCAATTGACCAAAGCCCGAAGCTTTCTTTGAAACCGGAGAATTCGGAGCCGACCCCCCAAGCAGAACCGGAGAAATTCAGCCCCATTGATGAGATGGGGAACCCGTTATCTCTGGTTCGGGCTATGGTGGCGGTTTGCTTACTTGAAATAGTGCCCTTTTCGCGAATTGACTCGTCAGCAGTGTTGAGGAAGCTTGAGGGCGACCAGAAAGCGACTGAGGAGGAGAAGGCAGCCTTGCGCGAGATGGGAGGAGAGTCCGGGGCGATATTGGCGGTGGAGATGGCGTTGAGGTCAATGGCGGAGGAGAACGGTGGTGTAGAGTTGGAGTTTGTGGTGGGTGGTAAGTCGAGGGTTGTCGTTTTGGGGATTGACCGGACTCGGCTGATGAAGGAATTGCCAGAAAGCAAGCAGTTTCATAGTCGAGATTTGAATTCAGGAGTTGAGAATGGGAGTTTGAGTCAGAATCAGCAGCAAGTGGTGGCTAGCGGCAGCGATGGTAATGGAGGTGGAGTGTTTGGGATGGGAGGCCCTAGTTCAAGGCCAATGCAGGACATGTGGATGAACCCTAATGATGCTCACATGGCCAGTTTTCCGCCTATGTTCCCTGGGAGTGGACAGCCGGGTTCATTTATGGGTCCAAGGGGTGCTCCTAATCCTAGAGTTATGGGCATGATGGGAATGCCTAGAGGGATGGGTGGTGTTCCTCCAATGCATAGAGCTAATAGTATGGGGCCGAATGCAACAATGGATAGCCCCAATTCGATGTTACATAAGCCGCGGAGTGAAGAGGAGGAACTGAAGGATGTTGAGGCACTGTTGAATAAGAAGACTTTTAGGGAGTTGCAGAAGTCAAAAACTGGTGAGGAGATTTTGGACCTCATTCACCGGCCAACTGCGAAGGAGACTGCTGTAGCTGCCAAGTTCAAAACTAAAGGTGGTTCACAGTTGAAGGAATACTGCTCATCCTTAACAAAAGAGGACTGCTGTCGTCAGTCTAATTCCATGCATGCATGTGAGAAGGTTCATTTTAGGCGAATAATCGCTCTACATACTGATGTCAATTTAGGAGACTGTTCTTTTCTAGATACTTGTCGTCACATGAAGACATGCAAGTATGTCCACTATGAGCTTGATCCAACACCTGATGTGTCACACATGATGATGGGGCCTCCAGCACTCGCTCCACCTAGACAATTAAGGCCTCAACGTGCTGAATACTGTTCTGAGGTTGAACTTGGTCAACCACAGTGGATTAACTGTGATATACGCAACTTTAGAATGGACATTCTAGGGCAATTTGGAGTGATAATGGCAGATCCACCATGGGACATTCATATGGAATTGCCTTATGGGACAATGGCTGATGATGAAATGCGCAATCTTAATGTTCCGGCGTTGCAGACTGATGGTCTGATTTTCCTTTGGGTCACTGGACGTGCAATGGAGCTTGGGCGTGAATGTTTAGAATTTTGGGGATACAAGCGTATCGAGGAGATAATTTGGGTAAAGACTAATCAACTTCAACGAATAATTAGAACAGGGCGGACTGGCCACTGGCTTAATCATAGCAAGGAGCATTGTCTTGTTGGAATAAAGGGGGAACCATTAGTAAATAGAAATATTGATACTGATGTCATTGTTGCTGAGGTCAGAGAGACAAGCCGCAAGCCAGATGAGATGTACCCTTTGTTGGAGAGGGTAAGTCCAAGGACAAGAAAACTGGAACTGTTTGCTCGCATGCACAATACTCATGCAGGGTGGATGTCACTAGGTAATCAACTGAGTGGTGTACGATTGGTTGATGAAGGCCTGCGTGCACGATTCAAGGCTGCTTATCCGGATGTGGAGGTGCAGCCCGCTTCCCCACCCAGGCCATCTGCTATGGAAGTCGACTCTACTGCTGCCCAAATGCGGAGTCCATTTTCAGAAACTGCAGCTCCGGAGGCCCCCTATGCTGCTTCTGAAGTTAAGCCTTCACCAATGGATGTTGAAATGGCCGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001510 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008168 GO:0008173 GO:0008174 GO:0008757 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016071 GO:0016422 GO:0016556 GO:0016604 GO:0016607 GO:0016740 GO:0016741 GO:0031974 GO:0031981 GO:0032259 GO:0032991 GO:0034641 GO:0034708 GO:0036396 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045293 GO:0046483 GO:0070013 GO:0071704 GO:0080009 GO:0090304 GO:0140098 GO:1901360 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MT-A70

Protein Analysis

816

Amino Acids

90.36

Weight (kDa)

6.53

Isoelectric Point (pI)

55.09

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011095)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G10760
fragaria_vesca	FvH4_5g11050 FvH4_5g11050
malus_domestica	MD06G1116900.v1.1 MD14G1124400.v1.1
prunus_persica	Prupe.5G128200_v2.0.a1
pyrus_communis	pycom06g10900
rosa_chinensis	RchiOBHm_Chr7g0186271 RchiOBHm_Chr7g0186751
rosa_laevigata	RLG00000004819
rosa_multiflora	Rmu_sc0009734.1_g000004
rosa_roxburghii	Rroxscaffold_3G00267860
rosa_rugosa	Rorug06G0473000 Rorug06G0476300
rosa_samantha	Rh7AG064200 Rh7BG080700 Rh7CG083300 Rh7DG084200
rosa_wichuraiana	Rw7G006690 Rw7G007220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1820
AccI	GTMKAC	1 cut(s)	2334
AccII	CGCG	3 cut(s)	607, 684, 1222
AccIII	TCCGGA	2 cut(s)	2281, 2383
AclWI	GGATC	2 cut(s)	1571, 1754
AcoI	YGGCCR	5 cut(s)	156, 1026, 1331, 1993, 2439
AcsI	RAATTY	4 cut(s)	484, 518, 874, 1910
AcuI	CTGAAG	2 cut(s)	1262, 2427
AfaI	GTAC	2 cut(s)	2126, 2235
AfiI	CCNNNNNNNGG	5 cut(s)	172, 1055, 2134, 2313, 2355
AflIII	ACRYGT	1 cut(s)	996
AhdI	GACNNNNNGTC	1 cut(s)	1851
AjiI	CACGTC	1 cut(s)	1880
AjnI	CCWGG	2 cut(s)	1048, 2312
AloI	GAACNNNNNNTCC	2 cut(s)	366, 398
AluBI	AGCT	9 cut(s)	184, 191, 466, 637, 1163, 1358, 1573, 1891, 2381
AluI	AGCT	9 cut(s)	184, 191, 466, 637, 1163, 1358, 1573, 1891, 2381
Alw21I	GWGCWC	2 cut(s)	1093, 2263
Alw26I	GTCTC	5 cut(s)	116, 207, 1340, 1506, 2093
Alw44I	GTGCAC	1 cut(s)	2259
AlwI	GGATC	2 cut(s)	1571, 1754
AlwNI	CAGNNNCTG	1 cut(s)	2375
Aor13HI	TCCGGA	2 cut(s)	2281, 2383
ApaLI	GTGCAC	1 cut(s)	2259
ApoI	RAATTY	4 cut(s)	484, 518, 874, 1910
ArsI	GACNNNNNNTTYG	2 cut(s)	2344, 2376
AspLEI	GCGC	2 cut(s)	684, 1821
AspS9I	GGNCC	7 cut(s)	254, 971, 1079, 1175, 1318, 1610, 2389
AsuC2I	CCSGG	2 cut(s)	703, 1065
AsuHPI	GGTGA	3 cut(s)	1316, 1319, 2412
AsuII	TTCGAA	1 cut(s)	222
AsuNHI	GCTAGC	1 cut(s)	926
AvaII	GGWCC	2 cut(s)	1079, 1318
BaeGI	GKGCMC	2 cut(s)	600, 2263
BaeI	ACNNNNGTAYC	7 cut(s)	37, 1912, 1912, 1945, 1945, 2061, 2094
BalI	TGGCCA	3 cut(s)	158, 1028, 1995
BbsI	GAAGAC	2 cut(s)	1277, 1553
Bbv12I	GWGCWC	2 cut(s)	1093, 2263
BbvCI	CCTCAGC	1 cut(s)	2088
BcgI	CGANNNNNNTGC	2 cut(s)	2324, 2358
BciT130I	CCWGG	2 cut(s)	1050, 2314
BciVI	GTATCC	2 cut(s)	5, 1913
BcnI	CCSGG	2 cut(s)	703, 1065
BcoDI	GTCTC	5 cut(s)	116, 207, 1340, 1506, 2093
BfaI	CTAG	8 cut(s)	927, 975, 1101, 1128, 1526, 1632, 1733, 2213
BfmI	CTRYAG	2 cut(s)	1353, 2376
BfuI	GTATCC	2 cut(s)	5, 1913
Bme1390I	CCNGG	4 cut(s)	703, 1050, 1065, 2314
Bme18I	GGWCC	2 cut(s)	1079, 1318
BmeRI	GACNNNNNGTC	1 cut(s)	1851
BmgBI	CACGTC	1 cut(s)	1880
BmgT120I	GGNCC	7 cut(s)	254, 971, 1079, 1175, 1318, 1610, 2389
BmiI	GGNNCC	8 cut(s)	256, 492, 545, 1080, 1176, 1611, 2046, 2391
BmrFI	CCNGG	4 cut(s)	703, 1050, 1065, 2314
BmrI	ACTGGG	1 cut(s)	211
BmsI	GCATC	2 cut(s)	171, 1006
BmtI	GCTAGC	1 cut(s)	930
BmuI	ACTGGG	1 cut(s)	211
BoxI	GACNNNNGTC	1 cut(s)	1428
BpiI	GAAGAC	2 cut(s)	1277, 1553
BpmI	CTGGAG	1 cut(s)	1599
Bpu10I	CCTNAGC	2 cut(s)	426, 2088
Bpu14I	TTCGAA	1 cut(s)	222
BpuEI	CTTGAG	2 cut(s)	272, 659
BpuMI	CCSGG	2 cut(s)	703, 1065
BsaI	GGTCTC	1 cut(s)	116
BsaWI	WCCGGW	5 cut(s)	478, 511, 816, 2281, 2383
Bsc4I	CCNNNNNNNGG	5 cut(s)	172, 1055, 2134, 2313, 2355
Bse118I	RCCGGY	2 cut(s)	1329, 2441
Bse1I	ACTGG	7 cut(s)	217, 1029, 1306, 1879, 1996, 2003, 2169
Bse3DI	GCAATG	2 cut(s)	123, 1890
BseAI	TCCGGA	2 cut(s)	2281, 2383
BseBI	CCWGG	2 cut(s)	1050, 2314
BseGI	GGATG	9 cut(s)	162, 969, 1008, 1140, 1252, 1406, 2211, 2290, 2434
BseLI	CCNNNNNNNGG	5 cut(s)	172, 1055, 2134, 2313, 2355
BseMI	GCAATG	2 cut(s)	123, 1890
BseMII	CTCAG	6 cut(s)	73, 417, 651, 1659, 2079, 2216
BseNI	ACTGG	7 cut(s)	217, 1029, 1306, 1879, 1996, 2003, 2169
BseSI	GKGCMC	2 cut(s)	600, 2263
BsgI	GTGCAG	1 cut(s)	2315
Bsh1236I	CGCG	3 cut(s)	607, 684, 1222
Bsh1285I	CGRYCG	2 cut(s)	313, 372
BsiEI	CGRYCG	2 cut(s)	313, 372
BsiHKAI	GWGCWC	2 cut(s)	1093, 2263
BslFI	GGGAC	4 cut(s)	251, 406, 1784, 1810
BslI	CCNNNNNNNGG	5 cut(s)	172, 1055, 2134, 2313, 2355
BsmAI	GTCTC	5 cut(s)	116, 207, 1340, 1506, 2093
BsmFI	GGGAC	4 cut(s)	251, 406, 1784, 1810
BsmI	GAATGC	2 cut(s)	1128, 1186
Bso31I	GGTCTC	1 cut(s)	116
Bsp119I	TTCGAA	1 cut(s)	222
Bsp1286I	GDGCHC	3 cut(s)	600, 1093, 2263
Bsp13I	TCCGGA	2 cut(s)	2281, 2383
Bsp143I	GATC	4 cut(s)	277, 369, 1576, 1759
Bsp19I	CCATGG	3 cut(s)	153, 171, 1766
Bsp68I	TCGCGA	1 cut(s)	607
BspCNI	CTCAG	6 cut(s)	72, 418, 652, 1660, 2080, 2217
BspEI	TCCGGA	2 cut(s)	2281, 2383
BspFNI	CGCG	3 cut(s)	607, 684, 1222
BspLI	GGNNCC	8 cut(s)	256, 492, 545, 1080, 1176, 1611, 2046, 2391
BspMAI	CTGCAG	1 cut(s)	2380
BspOI	GCTAGC	1 cut(s)	930
BspPI	GGATC	2 cut(s)	1571, 1754
BspT104I	TTCGAA	1 cut(s)	222
BspTNI	GGTCTC	1 cut(s)	116
BsrDI	GCAATG	2 cut(s)	123, 1890
BsrFI	RCCGGY	2 cut(s)	1329, 2441
BsrI	ACTGG	7 cut(s)	217, 1029, 1306, 1879, 1996, 2003, 2169
BssAI	RCCGGY	2 cut(s)	1329, 2441
BssMI	GATC	4 cut(s)	277, 369, 1576, 1759
BssT1I	CCWWGG	5 cut(s)	153, 171, 1082, 1766, 2150
Bst2UI	CCWGG	2 cut(s)	1050, 2314
Bst4CI	ACNGT	8 cut(s)	755, 1260, 1389, 1517, 1664, 1692, 1703, 2172
Bst6I	CTCTTC	2 cut(s)	342, 1224
BstBI	TTCGAA	1 cut(s)	222
BstDEI	CTNAG	6 cut(s)	59, 426, 660, 1668, 2088, 2225
BstDSI	CCRYGG	4 cut(s)	153, 171, 1220, 1766
BstF5I	GGATG	9 cut(s)	162, 969, 1008, 1140, 1252, 1406, 2211, 2290, 2434
BstFNI	CGCG	3 cut(s)	607, 684, 1222
BstHHI	GCGC	2 cut(s)	684, 1821
BstKTI	GATC	4 cut(s)	280, 372, 1579, 1762
BstMAI	GTCTC	5 cut(s)	116, 207, 1340, 1506, 2093
BstMBI	GATC	4 cut(s)	277, 369, 1576, 1759
BstMCI	CGRYCG	2 cut(s)	313, 372
BstMWI	GCNNNNNNNGC	8 cut(s)	31, 572, 604, 713, 1025, 1358, 2387, 2396
BstNI	CCWGG	2 cut(s)	1050, 2314
BstNSI	RCATGY	5 cut(s)	1000, 1454, 1458, 1554, 2185
BstPAI	GACNNNNGTC	1 cut(s)	1428
BstSCI	CCNGG	4 cut(s)	701, 1048, 1063, 2312
BstSFI	CTRYAG	2 cut(s)	1353, 2376
BstSLI	GKGCMC	2 cut(s)	600, 2263
BstUI	CGCG	3 cut(s)	607, 684, 1222
BstV2I	GAAGAC	2 cut(s)	1277, 1553
BstX2I	RGATCY	1 cut(s)	1759
BstYI	RGATCY	1 cut(s)	1759
BsuI	GTATCC	2 cut(s)	5, 1913
BtgI	CCRYGG	4 cut(s)	153, 171, 1220, 1766
BtgZI	GCGATG	1 cut(s)	951
BtrI	CACGTC	1 cut(s)	1880
BtsCI	GGATG	9 cut(s)	162, 969, 1008, 1140, 1252, 1406, 2211, 2290, 2434
BtsI	GCAGTG	1 cut(s)	630
BtsIMutI	CAGTG	5 cut(s)	630, 1256, 1697, 1872, 1996
BtuMI	TCGCGA	1 cut(s)	607
CaiI	CAGNNNCTG	1 cut(s)	2375
CfoI	GCGC	2 cut(s)	684, 1821
Cfr10I	RCCGGY	2 cut(s)	1329, 2441
Cfr13I	GGNCC	7 cut(s)	254, 971, 1079, 1175, 1318, 1610, 2389
Cfr42I	CCGCGG	1 cut(s)	1223
Csp6I	GTAC	2 cut(s)	2125, 2234
CspCI	CAANNNNNGTGG	2 cut(s)	1673, 1708
CviQI	GTAC	2 cut(s)	2125, 2234
DdeI	CTNAG	6 cut(s)	59, 426, 660, 1668, 2088, 2225
DpnI	GATC	4 cut(s)	279, 371, 1578, 1761
DpnII	GATC	4 cut(s)	277, 369, 1576, 1759
DriI	GACNNNNNGTC	1 cut(s)	1851
EaeI	YGGCCR	5 cut(s)	156, 1026, 1331, 1993, 2439
Eam1104I	CTCTTC	2 cut(s)	342, 1224
Eam1105I	GACNNNNNGTC	1 cut(s)	1851
EarI	CTCTTC	2 cut(s)	342, 1224
EciI	GGCGGA	4 cut(s)	289, 758, 1026, 2002
Eco130I	CCWWGG	5 cut(s)	153, 171, 1082, 1766, 2150
Eco147I	AGGCCT	2 cut(s)	1645, 2253
Eco31I	GGTCTC	1 cut(s)	116
Eco47I	GGWCC	2 cut(s)	1079, 1318
Eco57I	CTGAAG	2 cut(s)	1262, 2427
EcoO109I	RGGNCCY	3 cut(s)	971, 1610, 2389
EcoRI	GAATTC	2 cut(s)	484, 874
EcoRII	CCWGG	2 cut(s)	1048, 2312
EcoT14I	CCWWGG	5 cut(s)	153, 171, 1082, 1766, 2150
EcoT22I	ATGCAT	3 cut(s)	1158, 1452, 1456
ErhI	CCWWGG	5 cut(s)	153, 171, 1082, 1766, 2150
FalI	AAGNNNNNCTT	2 cut(s)	662, 694
FaqI	GGGAC	4 cut(s)	251, 406, 1784, 1810
FauI	CCCGC	1 cut(s)	2308
FauNDI	CATATG	1 cut(s)	1779
FblI	GTMKAC	1 cut(s)	2334
FokI	GGATG	9 cut(s)	149, 976, 1015, 1147, 1259, 1393, 2218, 2297, 2441
FspBI	CTAG	8 cut(s)	927, 975, 1101, 1128, 1526, 1632, 1733, 2213
FspI	TGCGCA	1 cut(s)	1820
GlaI	GCGC	2 cut(s)	683, 1820
GsuI	CTGGAG	1 cut(s)	1599
HhaI	GCGC	2 cut(s)	684, 1821
Hin6I	GCGC	2 cut(s)	682, 1819
HinP1I	GCGC	2 cut(s)	682, 1819
HincII	GTYRAC	2 cut(s)	1685, 2335
HindII	GTYRAC	2 cut(s)	1685, 2335
HindIII	AAGCTT	2 cut(s)	464, 635
HinfI	GANTC	9 cut(s)	200, 614, 698, 820, 901, 907, 2265, 2336, 2359
HphI	GGTGA	3 cut(s)	1316, 1319, 2412
Hpy166II	GTNNAC	7 cut(s)	1058, 1385, 1564, 1685, 2234, 2261, 2335
Hpy188I	TCNGA	9 cut(s)	133, 167, 490, 906, 1669, 1857, 2096, 2371, 2407
Hpy188III	TCNNGA	7 cut(s)	341, 606, 866, 879, 1526, 2282, 2384
Hpy8I	GTNNAC	7 cut(s)	1058, 1385, 1564, 1685, 2234, 2261, 2335
HpyCH4III	ACNGT	8 cut(s)	755, 1260, 1389, 1517, 1664, 1692, 1703, 2172
HpyCH4IV	ACGT	3 cut(s)	15, 1651, 1879
HpyF10VI	GCNNNNNNNGC	8 cut(s)	31, 572, 604, 713, 1025, 1358, 2387, 2396
HpyF3I	CTNAG	6 cut(s)	59, 426, 660, 1668, 2088, 2225
HpySE526I	ACGT	3 cut(s)	15, 1651, 1879
HspAI	GCGC	2 cut(s)	682, 1819
Kpn2I	TCCGGA	2 cut(s)	2281, 2383
KspI	CCGCGG	1 cut(s)	1223
Kzo9I	GATC	4 cut(s)	277, 369, 1576, 1759
LmnI	GCTCC	6 cut(s)	490, 1096, 1630, 1888, 2017, 2386
LweI	GCATC	2 cut(s)	171, 1006
MaeI	CTAG	8 cut(s)	927, 975, 1101, 1128, 1526, 1632, 1733, 2213
MaeII	ACGT	3 cut(s)	15, 1651, 1879
MaeIII	GTNAC	5 cut(s)	1209, 1538, 1593, 1870, 2208
MalI	GATC	4 cut(s)	279, 371, 1578, 1761
MboI	GATC	4 cut(s)	277, 369, 1576, 1759
MboII	GAAGA	5 cut(s)	29, 329, 1241, 1282, 1558
MfeI	CAATTG	1 cut(s)	447
MflI	RGATCY	1 cut(s)	1759
MhlI	GDGCHC	3 cut(s)	600, 1093, 2263
MlsI	TGGCCA	3 cut(s)	158, 1028, 1995
MluNI	TGGCCA	3 cut(s)	158, 1028, 1995
MlyI	GAGTC	7 cut(s)	209, 608, 707, 814, 910, 2330, 2368
MmeI	TCCRAC	4 cut(s)	747, 1604, 2011, 2115
Mox20I	TGGCCA	3 cut(s)	158, 1028, 1995
Mph1103I	ATGCAT	3 cut(s)	1158, 1452, 1456
MroI	TCCGGA	2 cut(s)	2281, 2383
MscI	TGGCCA	3 cut(s)	158, 1028, 1995
MseI	TTAA	7 cut(s)	1412, 1640, 1698, 1827, 2004, 2412, 2446
MslI	CAYNNNNRTG	5 cut(s)	1001, 1455, 1497, 1604, 1778
Msp20I	TGGCCA	3 cut(s)	158, 1028, 1995
MspA1I	CMGCKG	1 cut(s)	1222
MspR9I	CCNGG	4 cut(s)	703, 1050, 1065, 2314
MunI	CAATTG	1 cut(s)	447
Mva1269I	GAATGC	2 cut(s)	1128, 1186
MvaI	CCWGG	2 cut(s)	1050, 2314
MvnI	CGCG	3 cut(s)	607, 684, 1222
MwoI	GCNNNNNNNGC	8 cut(s)	31, 572, 604, 713, 1025, 1358, 2387, 2396
NciI	CCSGG	2 cut(s)	703, 1065
NcoI	CCATGG	3 cut(s)	153, 171, 1766
NdeI	CATATG	1 cut(s)	1779
NdeII	GATC	4 cut(s)	277, 369, 1576, 1759
NheI	GCTAGC	1 cut(s)	926
NlaIV	GGNNCC	8 cut(s)	256, 492, 545, 1080, 1176, 1611, 2046, 2391
NmeAIII	GCCGAG	1 cut(s)	802
NmuCI	GTSAC	4 cut(s)	1538, 1593, 1870, 2208
NruI	TCGCGA	1 cut(s)	607
NsbI	TGCGCA	1 cut(s)	1820
NsiI	ATGCAT	3 cut(s)	1158, 1452, 1456
NspI	RCATGY	5 cut(s)	1000, 1454, 1458, 1554, 2185
NspV	TTCGAA	1 cut(s)	222
PaeI	GCATGC	2 cut(s)	1454, 2185
PasI	CCCWGGG	1 cut(s)	1049
PceI	AGGCCT	2 cut(s)	1645, 2253
PciI	ACATGT	1 cut(s)	996
PctI	GAATGC	2 cut(s)	1128, 1186
PfeI	GAWTC	2 cut(s)	907, 2265
Ple19I	CGATCG	1 cut(s)	372
PleI	GAGTC	7 cut(s)	208, 608, 706, 814, 909, 2330, 2367
PpsI	GAGTC	7 cut(s)	208, 608, 706, 814, 909, 2330, 2367
PscI	ACATGT	1 cut(s)	996
PshAI	GACNNNNGTC	1 cut(s)	1428
Psp6I	CCWGG	2 cut(s)	1048, 2312
PspGI	CCWGG	2 cut(s)	1048, 2312
PspN4I	GGNNCC	8 cut(s)	256, 492, 545, 1080, 1176, 1611, 2046, 2391
PspPI	GGNCC	7 cut(s)	254, 971, 1079, 1175, 1318, 1610, 2389
PstI	CTGCAG	1 cut(s)	2380
PstNI	CAGNNNCTG	1 cut(s)	2375
PsuI	RGATCY	1 cut(s)	1759
PvuI	CGATCG	1 cut(s)	372
RruI	TCGCGA	1 cut(s)	607
RsaI	GTAC	2 cut(s)	2126, 2235
RsaNI	GTAC	2 cut(s)	2125, 2234
RseI	CAYNNNNRTG	5 cut(s)	1001, 1455, 1497, 1604, 1778
SacII	CCGCGG	1 cut(s)	1223
SalI	GTCGAC	1 cut(s)	2333
SaqAI	TTAA	7 cut(s)	1412, 1640, 1698, 1827, 2004, 2412, 2446
Sau3AI	GATC	4 cut(s)	277, 369, 1576, 1759
Sau96I	GGNCC	7 cut(s)	254, 971, 1079, 1175, 1318, 1610, 2389
SchI	GAGTC	7 cut(s)	209, 608, 707, 814, 910, 2330, 2368
ScrFI	CCNGG	4 cut(s)	703, 1050, 1065, 2314
SduI	GDGCHC	3 cut(s)	600, 1093, 2263
SfaNI	GCATC	2 cut(s)	171, 1006
SfcI	CTRYAG	2 cut(s)	1353, 2376
Sfr303I	CCGCGG	1 cut(s)	1223
SfuI	TTCGAA	1 cut(s)	222
SgrBI	CCGCGG	1 cut(s)	1223
SinI	GGWCC	2 cut(s)	1079, 1318
SmiMI	CAYNNNNRTG	5 cut(s)	1001, 1455, 1497, 1604, 1778
SmlI	CTYRAG	2 cut(s)	287, 638
SmoI	CTYRAG	2 cut(s)	287, 638
SphI	GCATGC	2 cut(s)	1454, 2185
SseBI	AGGCCT	2 cut(s)	1645, 2253
SspI	AATATT	1 cut(s)	2065
SspMI	CTAG	8 cut(s)	927, 975, 1101, 1128, 1526, 1632, 1733, 2213
StuI	AGGCCT	2 cut(s)	1645, 2253
StyD4I	CCNGG	4 cut(s)	701, 1048, 1063, 2312
StyI	CCWWGG	5 cut(s)	153, 171, 1082, 1766, 2150
TaaI	ACNGT	8 cut(s)	755, 1260, 1389, 1517, 1664, 1692, 1703, 2172
TaiI	ACGT	3 cut(s)	18, 1654, 1882
TauI	GCSGC	4 cut(s)	414, 933, 1222, 2109
TfiI	GAWTC	2 cut(s)	907, 2265
Tru1I	TTAA	7 cut(s)	1412, 1640, 1698, 1827, 2004, 2412, 2446
Tru9I	TTAA	7 cut(s)	1412, 1640, 1698, 1827, 2004, 2412, 2446
TscAI	CASTG	5 cut(s)	630, 1263, 1697, 1879, 2003
TseFI	GTSAC	4 cut(s)	1538, 1593, 1870, 2208
Tsp45I	GTSAC	4 cut(s)	1538, 1593, 1870, 2208
TspDTI	ATGAA	9 cut(s)	845, 848, 1019, 1059, 1457, 1559, 1766, 1827, 2262
TspRI	CASTG	5 cut(s)	630, 1263, 1697, 1879, 2003
VneI	GTGCAC	1 cut(s)	2259
VpaK11BI	GGWCC	2 cut(s)	1079, 1318
XapI	RAATTY	4 cut(s)	484, 518, 874, 1910
XbaI	TCTAGA	1 cut(s)	1525
XceI	RCATGY	5 cut(s)	1000, 1454, 1458, 1554, 2185
XcmI	CCANNNNNNNNNTGG	2 cut(s)	134, 535
XmiI	GTMKAC	1 cut(s)	2334
XspI	CTAG	8 cut(s)	927, 975, 1101, 1128, 1526, 1632, 1733, 2213
Zsp2I	ATGCAT	3 cut(s)	1158, 1452, 1456

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.