Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0011095

Physical Location & Seq

Genomic Coordinates Reverse (-)

62783038 .. 62787017

Gene Structure 3980 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000004819

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2244 bp

ATGGAGACCCAATCTGGCGGCAAAGAAGACACGGCCATGTCCGCCATCAAAGCAATGCGCCAAGACCTGGAAACCCGAATGGAGTCCCAACGCGCCACCCAGCTCGAACTCCTCTCTTATCTCCAATCCGAAATCGACCCCGCCATCGTCCCCGCCATCGATCTCTCCCTCAAGGTCCTCTCCTCCTTCAACAACCGCCCCTTCACTCCCACCCCTCCCCTACCCGACCCGAAGCCCAACCCCAGAAAGCCCATCGAGCCCGCCCGCCCTCCCTCCCCACAACTACCCCTCCTCCCTTCGCCCGAACCACCCCCCGCCTCCCCCGAAAGCCCCCCCAACCTTTCCCCCAAACCCGACCCGACCCGAGAATCCTCCCCGGATTTCAGCCCCGTGGACGAGAGCGGGAACCCGCTTTCGGTGATCCGGGCCATGATTGCGGTTCGGTTTCTTGAGAGAGTGCCGTTTATGCTGGTGGAGTCGTCGGAGCTGCTGAAGCAGCTCGAGACCGACGCCAAGGCCTCGCCGGAGGAGAAGGTGGCGCTGCGGGATGTGGGAGGAGAGAACGGGGGGATTCTGGCCGTGGAGATGGCGCTGAGGTCGATGGCGGAGGAGAACGGCGGCGTTATCCTCGAGGAGTACGCGGTCAACGGAAAGTCAAGGGTTACGGTGAGGGATATTGACCGGACTAGGCTGATGAAGGAGTTGCCGGAGAGCAAGCAAGATTCGATTGTGGATGGGAATGGGAATTTCAATCAGACTAGTGGCATGGATGGTGGGAATAACAATGGAGGAGGGTTTGTTGGTAGAGGTGGGCCTTGGGTGGTTGGGCCGGAGCCCTACATAAGCGGGTTGCCGCCATTGTTTCCGGGGATAGGTCCGAGAGGAAGAGGGATGATAGGAATGCAGAGAGGGATGATTGGGTCTCCAATGCATAGGCCTAATGGTGGAATGGTGGTCAGTCCCAACGGAATGCCGAATAAGAGCATGAAGAGTGAAGAGGAGGAGATGAAGGATCTTGAGGCATTGCTGAGTAAGAAGACTTATAGGGAGTTGCAGAAGTCGAAAACTGGGGAGGAGCTTTTGGACCTCATTCACAGGCCAACTGCAAAGGAGACTGCTGTGGCAAACAAGTTCAAAACTAAAGGTGGTTCACAATTGAAGGAATACTGCACATCCCTAACAAAAGAGGACTGCCGACGTCAATCTAACTCCTTGCTCGCTTGTGAGAAGGTTCATTTTAGGCGCATAATTGCTCTACATACTGATGTCAACTTGGGTGACTGTTCTTTTCTAGATACTTGCCGCCACATGAAGACATGCAAGTATGTACATTATGAGCTTGATTCAACGCCAGATGTGTCAAACATGTTGGCTCCCCCTAAACCATTAAAGCAGCGTGCTGAATATTGTTCTGAGGTAGAACTTGGTCAACCACAATGGATTAACTGTGATATCCGCAATTTTAGAATGGATATATTGGGACAGTTTGGAGTCATAATGGCTGATCCGCCATGGGACATTCATATGGAATTGCCTTATGGGACTATGGCTGATGATGAAATGCGCACTCTTAATGTTCCTGCATTGCAGACTGATGGTCTGATTTTCCTTTGGGTCACTGGACGTGCAATGGAGCTTGGACGTGAATGTTTAGAACTTTGGGGATACAAGCGTATTGAGGAGATGATTTGGGTGAAAACTAATCAACTGCAACGAATAATTAGAACTGGGCGCACTGGCCACTGGCTAAATCATAGCAAGGAGCATTGCCTCGTTGGAATAAAAGGAGATCCATTAGTAAATAGGAATATTGATACTGATGTCATTGTTGCTGAGGTCAGAGAGACAAGTCGTAAGCCAGACGAGATGTACCCTTTGCTGGAGAGGATTAGTCCAAGGACAAGAAAGCTGGAACTGTTTGCACGCATGCACAACACTCATGCAGGGTGGATGTCACTCGGTAATCAACTGAGTGGTGTACGATTGGTTGATGAAGGCTTGCGGGCACGGTTCAAGGCTGCCTACCCAGAGGTGGAGGTGCAGCCAGCTTCCCCACCCAGAGCTTCTGCCATGGAAGTGGATTCAATTGCTGCCCAAACGAGAAGTCCATTTTCCGAAGCAAAGCCCACAGCTGCACAACAAGCAGAGGTTGCTGCTTCACAACAAGCAGAGCCTGCAGGGCCAGATGCGCCTGCTCCTGAGGGGAAGCCAACGTCTACCACCGATGTTGACATGGCCGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001510 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008168 GO:0008173 GO:0008174 GO:0008757 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016071 GO:0016422 GO:0016556 GO:0016604 GO:0016607 GO:0016740 GO:0016741 GO:0031974 GO:0031981 GO:0032259 GO:0032991 GO:0034641 GO:0034708 GO:0036396 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045293 GO:0046483 GO:0070013 GO:0071704 GO:0080009 GO:0090304 GO:0140098 GO:1901360 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MT-A70

Protein Analysis

748

Amino Acids

82.5

Weight (kDa)

5.64

Isoelectric Point (pI)

53.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MT-A70	PF05063	496 - 656	3.3e-60	MT-A70

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011095)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G10760
fragaria_vesca	FvH4_5g11050 FvH4_5g11050
malus_domestica	MD06G1116900.v1.1 MD14G1124400.v1.1
prunus_persica	Prupe.5G128200_v2.0.a1
pyrus_communis	pycom06g10900
rosa_chinensis	RchiOBHm_Chr7g0186271 RchiOBHm_Chr7g0186751
rosa_laevigata	RLG00000004819
rosa_multiflora	Rmu_sc0009734.1_g000004
rosa_roxburghii	Rroxscaffold_3G00267860
rosa_rugosa	Rorug06G0473000 Rorug06G0476300
rosa_samantha	Rh7AG064200 Rh7BG080700 Rh7CG083300 Rh7DG084200
rosa_wichuraiana	Rw7G006690 Rw7G007220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1201
AbsI	CCTCGAGG	1 cut(s)	629
Acc16I	TGCGCA	1 cut(s)	1565
AccB7I	CCANNNNNTGG	1 cut(s)	67
AccBSI	CCGCTC	1 cut(s)	402
AccI	GTMKAC	1 cut(s)	2216
AccII	CGCG	2 cut(s)	93, 641
AclWI	GGATC	4 cut(s)	415, 1020, 1499, 1784
AcoI	YGGCCR	4 cut(s)	33, 576, 1738, 2235
AcsI	RAATTY	1 cut(s)	745
AcuI	CTGAAG	1 cut(s)	512
AcyI	GRCGYC	2 cut(s)	510, 1198
AfaI	GTAC	4 cut(s)	638, 1329, 1871, 1980
AfiI	CCNNNNNNNGG	6 cut(s)	67, 415, 872, 944, 1879, 2032
AflIII	ACRYGT	1 cut(s)	1365
AgsI	TTSAA	7 cut(s)	190, 751, 1135, 1159, 1347, 2014, 2085
AhdI	GACNNNNNGTC	1 cut(s)	1596
AhlI	ACTAGT	1 cut(s)	758
AjiI	CACGTC	2 cut(s)	1625, 1643
AjnI	CCWGG	1 cut(s)	66
Alw26I	GTCTC	4 cut(s)	497, 927, 1106, 1838
AlwI	GGATC	4 cut(s)	415, 1020, 1499, 1784
AlwNI	CAGNNNCTG	1 cut(s)	2174
Ama87I	CYCGRG	3 cut(s)	363, 500, 629
ApeKI	GCWGC	9 cut(s)	487, 496, 541, 1393, 2018, 2041, 2090, 2132, 2153
ApoI	RAATTY	1 cut(s)	745
ArsI	GACNNNNNNTTYG	2 cut(s)	2089, 2121
AspLEI	GCGC	8 cut(s)	60, 95, 541, 592, 1245, 1566, 1734, 2191
AspS9I	GGNCC	7 cut(s)	175, 426, 812, 827, 875, 1084, 2180
AsuC2I	CCSGG	3 cut(s)	377, 425, 867
AsuHPI	GGTGA	4 cut(s)	430, 679, 1289, 1705
AvaI	CYCGRG	3 cut(s)	363, 500, 629
AvaII	GGWCC	3 cut(s)	175, 875, 1084
AxyI	CCTNAGG	1 cut(s)	2199
BaeGI	GKGCMC	1 cut(s)	2008
BaeI	ACNNNNGTAYC	4 cut(s)	1657, 1690, 1806, 1839
BalI	TGGCCA	1 cut(s)	1740
BanII	GRGCYC	2 cut(s)	261, 837
BbsI	GAAGAC	3 cut(s)	33, 1043, 1319
BbvCI	CCTCAGC	2 cut(s)	593, 1833
BbvI	GCAGC	9 cut(s)	474, 508, 528, 1405, 2005, 2053, 2077, 2119, 2140
BccI	CCATC	9 cut(s)	53, 152, 164, 260, 580, 595, 728, 764, 1589
BceAI	ACGGC	4 cut(s)	48, 445, 563, 631
BciT130I	CCWGG	1 cut(s)	68
BciVI	GTATCC	1 cut(s)	1658
BcnI	CCSGG	3 cut(s)	377, 425, 867
BcoDI	GTCTC	4 cut(s)	497, 927, 1106, 1838
BcuI	ACTAGT	1 cut(s)	758
BfaI	CTAG	3 cut(s)	687, 759, 1292
BfmI	CTRYAG	1 cut(s)	2175
BfoI	RGCGCY	2 cut(s)	542, 593
BfuI	GTATCC	1 cut(s)	1658
BglI	GCCNNNNNGGC	1 cut(s)	2179
Bme1390I	CCNGG	4 cut(s)	68, 377, 425, 867
Bme18I	GGWCC	3 cut(s)	175, 875, 1084
BmeRI	GACNNNNNGTC	1 cut(s)	1596
BmeT110I	CYCGRG	3 cut(s)	363, 500, 629
BmgBI	CACGTC	2 cut(s)	1625, 1643
BmgT120I	GGNCC	7 cut(s)	175, 426, 812, 827, 875, 1084, 2180
BmiI	GGNNCC	3 cut(s)	407, 834, 1374
BmrFI	CCNGG	4 cut(s)	68, 377, 425, 867
BmrI	ACTGGG	2 cut(s)	1077, 1737
BmsI	GCATC	1 cut(s)	2176
BmuI	ACTGGG	2 cut(s)	1077, 1737
BpiI	GAAGAC	3 cut(s)	33, 1043, 1319
BpmI	CTGGAG	1 cut(s)	1901
Bpu10I	CCTNAGC	2 cut(s)	593, 1833
BpuEI	CTTGAG	3 cut(s)	155, 470, 1037
BpuMI	CCSGG	3 cut(s)	377, 425, 867
Bsa29I	ATCGAT	1 cut(s)	159
BsaHI	GRCGYC	2 cut(s)	510, 1198
BsaI	GGTCTC	2 cut(s)	497, 927
BsaJI	CCNNGG	9 cut(s)	375, 390, 513, 579, 815, 866, 1511, 1895, 2070
BsaWI	WCCGGW	1 cut(s)	681
BsaXI	ACNNNNNCTCC	6 cut(s)	273, 276, 303, 306, 783, 813
Bsc4I	CCNNNNNNNGG	6 cut(s)	67, 415, 872, 944, 1879, 2032
Bse118I	RCCGGY	1 cut(s)	2237
Bse1I	ACTGG	5 cut(s)	1072, 1624, 1732, 1741, 1748
Bse21I	CCTNAGG	1 cut(s)	2199
Bse3DI	GCAATG	5 cut(s)	60, 1022, 1583, 1635, 1765
BseBI	CCWGG	1 cut(s)	68
BseCI	ATCGAT	1 cut(s)	159
BseDI	CCNNGG	9 cut(s)	375, 390, 513, 579, 815, 866, 1511, 1895, 2070
BseGI	GGATG	7 cut(s)	553, 739, 775, 897, 918, 1172, 1956
BseLI	CCNNNNNNNGG	6 cut(s)	67, 415, 872, 944, 1879, 2032
BseMI	GCAATG	5 cut(s)	60, 1022, 1583, 1635, 1765
BseMII	CTCAG	6 cut(s)	584, 1019, 1404, 1824, 1961, 2190
BseNI	ACTGG	5 cut(s)	1072, 1624, 1732, 1741, 1748
BseSI	GKGCMC	1 cut(s)	2008
BseXI	GCAGC	9 cut(s)	474, 508, 528, 1405, 2005, 2053, 2077, 2119, 2140
BseYI	CCCAGC	1 cut(s)	99
BsgI	GTGCAG	3 cut(s)	1153, 2060, 2118
Bsh1236I	CGCG	2 cut(s)	93, 641
BshVI	ATCGAT	1 cut(s)	159
BsiHKCI	CYCGRG	3 cut(s)	363, 500, 629
BsiSI	CCGG	8 cut(s)	377, 424, 524, 682, 707, 830, 866, 2238
BslFI	GGGAC	6 cut(s)	70, 134, 945, 1494, 1529, 1555
BslI	CCNNNNNNNGG	6 cut(s)	67, 415, 872, 944, 1879, 2032
BsmAI	GTCTC	4 cut(s)	497, 927, 1106, 1838
BsmFI	GGGAC	6 cut(s)	70, 134, 945, 1494, 1529, 1555
BsmI	GAATGC	2 cut(s)	906, 975
Bso31I	GGTCTC	2 cut(s)	497, 927
BsoBI	CYCGRG	3 cut(s)	363, 500, 629
Bsp1286I	GDGCHC	3 cut(s)	261, 837, 2008
Bsp1407I	TGTACA	1 cut(s)	1327
Bsp143I	GATC	5 cut(s)	160, 420, 1012, 1504, 1789
Bsp19I	CCATGG	2 cut(s)	1511, 2070
BspCNI	CTCAG	6 cut(s)	585, 1020, 1405, 1825, 1962, 2191
BspDI	ATCGAT	1 cut(s)	159
BspFNI	CGCG	2 cut(s)	93, 641
BspLI	GGNNCC	3 cut(s)	407, 834, 1374
BspMAI	CTGCAG	1 cut(s)	2179
BspPI	GGATC	4 cut(s)	415, 1020, 1499, 1784
BspTNI	GGTCTC	2 cut(s)	497, 927
BsrBI	CCGCTC	1 cut(s)	402
BsrDI	GCAATG	5 cut(s)	60, 1022, 1583, 1635, 1765
BsrFI	RCCGGY	1 cut(s)	2237
BsrGI	TGTACA	1 cut(s)	1327
BsrI	ACTGG	5 cut(s)	1072, 1624, 1732, 1741, 1748
BssAI	RCCGGY	1 cut(s)	2237
BssECI	CCNNGG	9 cut(s)	375, 390, 513, 579, 815, 866, 1511, 1895, 2070
BssMI	GATC	5 cut(s)	160, 420, 1012, 1504, 1789
BssNI	GRCGYC	2 cut(s)	510, 1198
BssT1I	CCWWGG	5 cut(s)	513, 815, 1511, 1895, 2070
Bst2UI	CCWGG	1 cut(s)	68
Bst4CI	ACNGT	6 cut(s)	667, 1283, 1448, 1485, 1917, 2010
Bst6I	CTCTTC	3 cut(s)	880, 983, 990
BstACI	GRCGYC	2 cut(s)	510, 1198
BstAPI	GCANNNNNTGC	2 cut(s)	2150, 2174
BstAUI	TGTACA	1 cut(s)	1327
BstDEI	CTNAG	6 cut(s)	593, 1028, 1413, 1833, 1970, 2199
BstDSI	CCRYGG	4 cut(s)	390, 579, 1511, 2070
BstF5I	GGATG	7 cut(s)	553, 739, 775, 897, 918, 1172, 1956
BstFNI	CGCG	2 cut(s)	93, 641
BstH2I	RGCGCY	2 cut(s)	542, 593
BstHHI	GCGC	8 cut(s)	60, 95, 541, 592, 1245, 1566, 1734, 2191
BstKTI	GATC	5 cut(s)	163, 423, 1015, 1507, 1792
BstMAI	GTCTC	4 cut(s)	497, 927, 1106, 1838
BstMBI	GATC	5 cut(s)	160, 420, 1012, 1504, 1789
BstNI	CCWGG	1 cut(s)	68
BstNSI	RCATGY	3 cut(s)	1320, 1369, 1930
BstSCI	CCNGG	4 cut(s)	66, 375, 423, 865
BstSFI	CTRYAG	1 cut(s)	2175
BstSLI	GKGCMC	1 cut(s)	2008
BstUI	CGCG	2 cut(s)	93, 641
BstV1I	GCAGC	9 cut(s)	474, 508, 528, 1405, 2005, 2053, 2077, 2119, 2140
BstV2I	GAAGAC	3 cut(s)	33, 1043, 1319
BstX2I	RGATCY	2 cut(s)	1012, 1789
BstXI	CCANNNNNNTGG	1 cut(s)	2077
BstYI	RGATCY	2 cut(s)	1012, 1789
Bsu15I	ATCGAT	1 cut(s)	159
Bsu36I	CCTNAGG	1 cut(s)	2199
BsuI	GTATCC	1 cut(s)	1658
BsuTUI	ATCGAT	1 cut(s)	159
BtgI	CCRYGG	4 cut(s)	390, 579, 1511, 2070
BtrI	CACGTC	2 cut(s)	1625, 1643
BtsCI	GGATG	7 cut(s)	553, 739, 775, 897, 918, 1172, 1956
BtsIMutI	CAGTG	3 cut(s)	1617, 1734, 1741
CaiI	CAGNNNCTG	1 cut(s)	2174
CfoI	GCGC	8 cut(s)	60, 95, 541, 592, 1245, 1566, 1734, 2191
Cfr10I	RCCGGY	1 cut(s)	2237
Cfr13I	GGNCC	7 cut(s)	175, 426, 812, 827, 875, 1084, 2180
ClaI	ATCGAT	1 cut(s)	159
CseI	GACGC	1 cut(s)	518
Csp6I	GTAC	4 cut(s)	637, 1328, 1870, 1979
CspCI	CAANNNNNGTGG	2 cut(s)	2209, 2244
CviQI	GTAC	4 cut(s)	637, 1328, 1870, 1979
DdeI	CTNAG	6 cut(s)	593, 1028, 1413, 1833, 1970, 2199
DpnI	GATC	5 cut(s)	162, 422, 1014, 1506, 1791
DpnII	GATC	5 cut(s)	160, 420, 1012, 1504, 1789
DriI	GACNNNNNGTC	1 cut(s)	1596
EaeI	YGGCCR	4 cut(s)	33, 576, 1738, 2235
Eam1104I	CTCTTC	3 cut(s)	880, 983, 990
Eam1105I	GACNNNNNGTC	1 cut(s)	1596
EarI	CTCTTC	3 cut(s)	880, 983, 990
EciI	GGCGGA	3 cut(s)	31, 620, 1497
Eco130I	CCWWGG	5 cut(s)	513, 815, 1511, 1895, 2070
Eco147I	AGGCCT	2 cut(s)	518, 937
Eco24I	GRGCYC	2 cut(s)	261, 837
Eco31I	GGTCTC	2 cut(s)	497, 927
Eco32I	GATATC	1 cut(s)	1453
Eco47I	GGWCC	3 cut(s)	175, 875, 1084
Eco57I	CTGAAG	1 cut(s)	512
Eco81I	CCTNAGG	1 cut(s)	2199
Eco88I	CYCGRG	3 cut(s)	363, 500, 629
EcoO109I	RGGNCCY	1 cut(s)	175
EcoRII	CCWGG	1 cut(s)	66
EcoRV	GATATC	1 cut(s)	1453
EcoT14I	CCWWGG	5 cut(s)	513, 815, 1511, 1895, 2070
EcoT22I	ATGCAT	1 cut(s)	933
EcoT38I	GRGCYC	2 cut(s)	261, 837
ErhI	CCWWGG	5 cut(s)	513, 815, 1511, 1895, 2070
FaqI	GGGAC	6 cut(s)	70, 134, 945, 1494, 1529, 1555
FauNDI	CATATG	1 cut(s)	1524
FblI	GTMKAC	1 cut(s)	2216
FokI	GGATG	7 cut(s)	560, 746, 782, 904, 925, 1159, 1963
FriOI	GRGCYC	2 cut(s)	261, 837
FspAI	RTGCGCAY	1 cut(s)	1565
FspBI	CTAG	3 cut(s)	687, 759, 1292
FspI	TGCGCA	1 cut(s)	1565
GlaI	GCGC	8 cut(s)	59, 94, 540, 591, 1244, 1565, 1733, 2190
GsaI	CCCAGC	1 cut(s)	103
GsuI	CTGGAG	1 cut(s)	1901
HaeII	RGCGCY	2 cut(s)	542, 593
HapII	CCGG	8 cut(s)	377, 424, 524, 682, 707, 830, 866, 2238
HgaI	GACGC	1 cut(s)	518
HhaI	GCGC	8 cut(s)	60, 95, 541, 592, 1245, 1566, 1734, 2191
Hin1I	GRCGYC	2 cut(s)	510, 1198
Hin6I	GCGC	8 cut(s)	58, 93, 539, 590, 1243, 1564, 1732, 2189
HinP1I	GCGC	8 cut(s)	58, 93, 539, 590, 1243, 1564, 1732, 2189
HincII	GTYRAC	4 cut(s)	646, 1270, 1430, 2230
HindII	GTYRAC	4 cut(s)	646, 1270, 1430, 2230
HinfI	GANTC	8 cut(s)	83, 368, 476, 571, 722, 1343, 1491, 2081
HpaII	CCGG	8 cut(s)	377, 424, 524, 682, 707, 830, 866, 2238
HphI	GGTGA	4 cut(s)	430, 679, 1289, 1705
Hpy166II	GTNNAC	8 cut(s)	394, 646, 1151, 1270, 1430, 1979, 2217, 2230
Hpy188I	TCNGA	8 cut(s)	130, 484, 756, 879, 1414, 1602, 1841, 2116
Hpy188III	TCNNGA	5 cut(s)	449, 502, 1016, 1292, 2198
Hpy8I	GTNNAC	8 cut(s)	394, 646, 1151, 1270, 1430, 1979, 2217, 2230
Hpy99I	CGWCG	3 cut(s)	484, 512, 1200
HpyAV	CCTTC	9 cut(s)	196, 211, 306, 526, 691, 1003, 1153, 1222, 1988
HpyCH4III	ACNGT	6 cut(s)	667, 1283, 1448, 1485, 1917, 2010
HpyCH4IV	ACGT	4 cut(s)	1198, 1624, 1642, 2213
HpyF3I	CTNAG	6 cut(s)	593, 1028, 1413, 1833, 1970, 2199
HpySE526I	ACGT	4 cut(s)	1198, 1624, 1642, 2213
Hsp92I	GRCGYC	2 cut(s)	510, 1198
HspAI	GCGC	8 cut(s)	58, 93, 539, 590, 1243, 1564, 1732, 2189
KroI	GCCGGC	1 cut(s)	2237
KroNI	GCCGGC	1 cut(s)	2239
Kzo9I	GATC	5 cut(s)	160, 420, 1012, 1504, 1789
LmnI	GCTCC	7 cut(s)	484, 832, 1075, 1378, 1633, 1762, 2200
Lsp1109I	GCAGC	9 cut(s)	474, 508, 528, 1405, 2005, 2053, 2077, 2119, 2140
LweI	GCATC	1 cut(s)	2176
MaeI	CTAG	3 cut(s)	687, 759, 1292
MaeII	ACGT	4 cut(s)	1198, 1624, 1642, 2213
MaeIII	GTNAC	4 cut(s)	661, 1277, 1615, 1953
MalI	GATC	5 cut(s)	162, 422, 1014, 1506, 1791
MbiI	CCGCTC	1 cut(s)	402
MboI	GATC	5 cut(s)	160, 420, 1012, 1504, 1789
MboII	GAAGA	6 cut(s)	38, 897, 1000, 1007, 1048, 1324
MfeI	CAATTG	2 cut(s)	1154, 2085
MflI	RGATCY	2 cut(s)	1012, 1789
MhlI	GDGCHC	3 cut(s)	261, 837, 2008
MlsI	TGGCCA	1 cut(s)	1740
MluCI	AATT	7 cut(s)	745, 1154, 1248, 1459, 1529, 1719, 2085
MluNI	TGGCCA	1 cut(s)	1740
MlyI	GAGTC	3 cut(s)	92, 485, 1500
MmeI	TCCRAC	2 cut(s)	462, 1756
Mox20I	TGGCCA	1 cut(s)	1740
Mph1103I	ATGCAT	1 cut(s)	933
MroNI	GCCGGC	1 cut(s)	2237
MscI	TGGCCA	1 cut(s)	1740
MseI	TTAA	3 cut(s)	1388, 1443, 1572
MslI	CAYNNNNRTG	4 cut(s)	35, 1263, 1523, 2075
Msp20I	TGGCCA	1 cut(s)	1740
MspA1I	CMGCKG	1 cut(s)	2132
MspI	CCGG	8 cut(s)	377, 424, 524, 682, 707, 830, 866, 2238
MspR9I	CCNGG	4 cut(s)	68, 377, 425, 867
MunI	CAATTG	2 cut(s)	1154, 2085
Mva1269I	GAATGC	2 cut(s)	906, 975
MvaI	CCWGG	1 cut(s)	68
MvnI	CGCG	2 cut(s)	93, 641
NaeI	GCCGGC	1 cut(s)	2239
NciI	CCSGG	3 cut(s)	377, 425, 867
NcoI	CCATGG	2 cut(s)	1511, 2070
NdeI	CATATG	1 cut(s)	1524
NdeII	GATC	5 cut(s)	160, 420, 1012, 1504, 1789
NgoMIV	GCCGGC	1 cut(s)	2237
NlaIV	GGNNCC	3 cut(s)	407, 834, 1374
NmuCI	GTSAC	3 cut(s)	1277, 1615, 1953
NsbI	TGCGCA	1 cut(s)	1565
NsiI	ATGCAT	1 cut(s)	933
NspI	RCATGY	3 cut(s)	1320, 1369, 1930
PaeI	GCATGC	1 cut(s)	1930
PaeR7I	CTCGAG	2 cut(s)	500, 629
PceI	AGGCCT	2 cut(s)	518, 937
PciI	ACATGT	1 cut(s)	1365
PctI	GAATGC	2 cut(s)	906, 975
PdiI	GCCGGC	1 cut(s)	2239
PfeI	GAWTC	5 cut(s)	368, 571, 722, 1343, 2081
PflMI	CCANNNNNTGG	1 cut(s)	67
PleI	GAGTC	3 cut(s)	91, 484, 1499
PpsI	GAGTC	3 cut(s)	91, 484, 1499
PpuMI	RGGWCCY	1 cut(s)	175
PscI	ACATGT	1 cut(s)	1365
Psp5II	RGGWCCY	1 cut(s)	175
Psp6I	CCWGG	1 cut(s)	66
PspFI	CCCAGC	1 cut(s)	99
PspGI	CCWGG	1 cut(s)	66
PspN4I	GGNNCC	3 cut(s)	407, 834, 1374
PspPI	GGNCC	7 cut(s)	175, 426, 812, 827, 875, 1084, 2180
PspPPI	RGGWCCY	1 cut(s)	175
PspXI	VCTCGAGB	1 cut(s)	629
PstI	CTGCAG	1 cut(s)	2179
PstNI	CAGNNNCTG	1 cut(s)	2174
PsuI	RGATCY	2 cut(s)	1012, 1789
PvuII	CAGCTG	1 cut(s)	2132
RsaI	GTAC	4 cut(s)	638, 1329, 1871, 1980
RsaNI	GTAC	4 cut(s)	637, 1328, 1870, 1979
RseI	CAYNNNNRTG	4 cut(s)	35, 1263, 1523, 2075
SaqAI	TTAA	3 cut(s)	1388, 1443, 1572
Sau3AI	GATC	5 cut(s)	160, 420, 1012, 1504, 1789
Sau96I	GGNCC	7 cut(s)	175, 426, 812, 827, 875, 1084, 2180
SbfI	CCTGCAGG	1 cut(s)	2179
SchI	GAGTC	3 cut(s)	92, 485, 1500
ScrFI	CCNGG	4 cut(s)	68, 377, 425, 867
SdaI	CCTGCAGG	1 cut(s)	2179
SduI	GDGCHC	3 cut(s)	261, 837, 2008
SfaNI	GCATC	1 cut(s)	2176
SfcI	CTRYAG	1 cut(s)	2175
Sfr274I	CTCGAG	2 cut(s)	500, 629
SinI	GGWCC	3 cut(s)	175, 875, 1084
SlaI	CTCGAG	2 cut(s)	500, 629
SmiMI	CAYNNNNRTG	4 cut(s)	35, 1263, 1523, 2075
SmlI	CTYRAG	5 cut(s)	170, 449, 500, 629, 1016
SmoI	CTYRAG	5 cut(s)	170, 449, 500, 629, 1016
SpeI	ACTAGT	1 cut(s)	758
SphI	GCATGC	1 cut(s)	1930
Sse8387I	CCTGCAGG	1 cut(s)	2179
Sse9I	AATT	7 cut(s)	745, 1154, 1248, 1459, 1529, 1719, 2085
SseBI	AGGCCT	2 cut(s)	518, 937
SspI	AATATT	2 cut(s)	1406, 1810
SspMI	CTAG	3 cut(s)	687, 759, 1292
StuI	AGGCCT	2 cut(s)	518, 937
StyD4I	CCNGG	4 cut(s)	66, 375, 423, 865
StyI	CCWWGG	5 cut(s)	513, 815, 1511, 1895, 2070
TaaI	ACNGT	6 cut(s)	667, 1283, 1448, 1485, 1917, 2010
TaiI	ACGT	4 cut(s)	1201, 1627, 1645, 2216
TaqI	TCGA	9 cut(s)	105, 135, 159, 255, 501, 599, 630, 725, 1061
TaqII	GACCGA	1 cut(s)	521
TasI	AATT	7 cut(s)	745, 1154, 1248, 1459, 1529, 1719, 2085
TatI	WGTACW	1 cut(s)	1327
TauI	GCSGC	4 cut(s)	21, 621, 856, 1305
TfiI	GAWTC	5 cut(s)	368, 571, 722, 1343, 2081
Tru1I	TTAA	3 cut(s)	1388, 1443, 1572
Tru9I	TTAA	3 cut(s)	1388, 1443, 1572
TscAI	CASTG	3 cut(s)	1624, 1741, 1748
TseFI	GTSAC	3 cut(s)	1277, 1615, 1953
TseI	GCWGC	9 cut(s)	487, 496, 541, 1393, 2018, 2041, 2090, 2132, 2153
Tsp45I	GTSAC	3 cut(s)	1277, 1615, 1953
TspDTI	ATGAA	8 cut(s)	710, 1001, 1022, 1223, 1325, 1511, 1572, 2007
TspGWI	ACGGA	2 cut(s)	663, 981
TspRI	CASTG	3 cut(s)	1624, 1741, 1748
Van91I	CCANNNNNTGG	1 cut(s)	67
VpaK11BI	GGWCC	3 cut(s)	175, 875, 1084
XapI	RAATTY	1 cut(s)	745
XbaI	TCTAGA	1 cut(s)	1291
XceI	RCATGY	3 cut(s)	1320, 1369, 1930
XhoI	CTCGAG	2 cut(s)	500, 629
XmiI	GTMKAC	1 cut(s)	2216
XspI	CTAG	3 cut(s)	687, 759, 1292
ZraI	GACGTC	1 cut(s)	1199
Zsp2I	ATGCAT	1 cut(s)	933

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.