Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0011095

Physical Location & Seq

Genomic Coordinates Reverse (-)

5818765 .. 5823182

Gene Structure 4418 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG080700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1956 bp

ATGGAGACCCAATCTGGCGGCAAAGAAGACACGGCCATCAAAGCAATGCGCCAGGACCTCGAAACCCGAATGGAGTACCAACGCGCCACCCAGCTCGAACTCCTCTCTTATCTCCAATCCGAAATCGACCCCGCCATCGTCCCCGCCATCGATCTCTCCCTCAAGGTCCTCTCTTCCTTCAACAACCGCTCCTTCACTCCCACCCCTCCTCTACCCGACCCCAAGCCCAACCCCAGAAAGCCCATCGAGCCCGCCCGCCCTCCCTCCCCACACCCACAACCACAACAGCCCCTCCTCCCTTCGCCCGCCTCCCCCCCCGAAAGCCCCGACCCGACCCGGGAATCCACCCCCGAGTTGGACGAGAGCCGGAACCCGCTTTCGGTTATCCGGGCCATGATTGCGGTTCGGTTTCTGGAGAGAGTGCCGTTTATGCTGGTGGAGTCGTCGGAGCTGCTGAAGCAGCTCGAGACCGACGCGAAGGCCTCGCCGGAGGAGAAGCTGGCGCTGCGGGAGGTGGGAGGAGAGAACGGGGGGATTCTGGCGGTGGAGATGGCGCTGAGGTCGATGGCGGAGGAGAACGGCGGCGTTATCCTGGAGGAGTACGCGGTCAACGGCAAGTCAAGGGTTACGGTGAGGGATATTGACCGGACTAGGCTGATGAAGGAGTTGCCGGAGAGCAAGCAAGATTCGATTGTGGATGGGAATGGGAATTTCAATCAGACTAGTGGCATGGATGGCGGGAATAACAATGGAGGAGGGTTTGTTGGTAGAGGTGGGCCGTGGGTGGTTGGGCCGGAGCCCTACATGAGCGGGTTGCCGCCATTGTTTCCGGGGATAGGTCCGAGAGGGAGAGGGATGATAGGAATGCCGAGAGGGATGAATGGGTCTCCAATGCATAGGCCTAATATGGGGCAGAATGGTGGTGGAATGGTGGTCAGTCCCAATGGAATGCCGAATAAGAGCATGAAGAGTGAAGAGGAAGAGATGAAGGATCTTGAGGCATTGCTGAGTAAGAAGACTTATAGGGAGTTGCAGAAGTCGAAAACTGGGGAGGAGCTTTTGGACCTCATTCACAGGCCAACTGCAAAGGAGACTGCTGTGGCAAACAAGTTCAAAACTAAAGGTGGTTCACAATTGAAGGAATACTGCACCTCCCTAACGAAAGAGGACTGCCGACGTCAATCTAATTCCTTGCTCGCTTGTGAGAAGGTTCATTTTAGGCGCATAATTGCTCTACATACTGATGTCAACTTGGGAGACTGTTCTTTTCTAGATACTTGCCGCCACATGAAGACATGCAAGTATGTACATTATGAGCTTGATTCAACACCAGATGTGTCAAACATGTTGGCTCCCCCTAAACCATTAAAGCAGCGTGCTGAATATTGTTCTGAGGTAGAACTTGGTCAACCACAATGGATTAACTGTGATATCCGCAATTTTAGAATGGATATATTGGGACAGTTTGGAGTCATAATGGCTGATCCGCCATGGGACATTCATATGGAATTGCCTTATGGGACTATGGCTGATGATGAAATGCGCACTCTTAATGTTCCTGCATTGCAGACTGATGGTCTGATTTTCCTTTGGGTCACTGGACGTGCGATGGAGCTTGGACGTGAATGTTTAGAACTTTGGGGATACAAGCGTATTGAGGAGATGATTTGGGTGAAAACTAATCAACTGCAACGAATAATTAGAACTGGGCGCACTGGCCACTGGCTAAATCATAGCAAGGAGCATTGCCTCGTTGGAATAAAAGGAGATCCATTAGTAAATAGGAATATTGATACTGATGTCATTGTTGCTGAGGTCAGAGAGACAAGTCGTAAGCCAGACGAGATGTACCCTTTGCTGGAGAGGATTAGTCCAAGGACAAGAAAGCTGGAACTGTTTGCACGCATGCACAACACTCATGCAGGGTATGCTTTCTTGACAAATGGTTGCAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001510 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008168 GO:0008173 GO:0008174 GO:0008757 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016071 GO:0016422 GO:0016556 GO:0016604 GO:0016607 GO:0016740 GO:0016741 GO:0031974 GO:0031981 GO:0032259 GO:0032991 GO:0034641 GO:0034708 GO:0036396 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045293 GO:0046483 GO:0070013 GO:0071704 GO:0080009 GO:0090304 GO:0140098 GO:1901360 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MT-A70

Protein Analysis

651

Amino Acids

72.86

Weight (kDa)

6.1

Isoelectric Point (pI)

51.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MT-A70	PF05063	489 - 643	4.3e-57	MT-A70

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011095)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G10760
fragaria_vesca	FvH4_5g11050 FvH4_5g11050
malus_domestica	MD06G1116900.v1.1 MD14G1124400.v1.1
prunus_persica	Prupe.5G128200_v2.0.a1
pyrus_communis	pycom06g10900
rosa_chinensis	RchiOBHm_Chr7g0186271 RchiOBHm_Chr7g0186751
rosa_laevigata	RLG00000004819
rosa_multiflora	Rmu_sc0009734.1_g000004
rosa_roxburghii	Rroxscaffold_3G00267860
rosa_rugosa	Rorug06G0473000 Rorug06G0476300
rosa_samantha	Rh7AG064200 Rh7BG080700 Rh7CG083300 Rh7DG084200
rosa_wichuraiana	Rw7G006690 Rw7G007220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1180
Acc16I	TGCGCA	1 cut(s)	1544
AccBSI	CCGCTC	2 cut(s)	189, 810
AccII	CGCG	3 cut(s)	84, 476, 605
AclWI	GGATC	3 cut(s)	999, 1478, 1763
AcoI	YGGCCR	2 cut(s)	33, 1717
AcsI	RAATTY	1 cut(s)	709
AcuI	CTGAAG	1 cut(s)	476
AcyI	GRCGYC	1 cut(s)	1177
AfaI	GTAC	4 cut(s)	77, 602, 1308, 1850
AfiI	CCNNNNNNNGG	6 cut(s)	337, 355, 379, 836, 908, 1858
AflIII	ACRYGT	1 cut(s)	1344
AgsI	TTSAA	5 cut(s)	181, 715, 1114, 1138, 1326
AhdI	GACNNNNNGTC	1 cut(s)	1575
AhlI	ACTAGT	1 cut(s)	722
AjiI	CACGTC	2 cut(s)	1604, 1622
AjnI	CCWGG	2 cut(s)	51, 591
AluBI	AGCT	8 cut(s)	94, 451, 463, 499, 1057, 1318, 1615, 1888
AluI	AGCT	8 cut(s)	94, 451, 463, 499, 1057, 1318, 1615, 1888
Alw26I	GTCTC	5 cut(s)	461, 891, 1085, 1251, 1817
AlwI	GGATC	3 cut(s)	999, 1478, 1763
Ama87I	CYCGRG	3 cut(s)	336, 350, 464
AoxI	GGCC	8 cut(s)	33, 390, 480, 776, 791, 899, 1076, 1717
ApeKI	GCWGC	4 cut(s)	451, 460, 505, 1372
ApoI	RAATTY	1 cut(s)	709
AspLEI	GCGC	7 cut(s)	51, 86, 505, 556, 1224, 1545, 1713
AspS9I	GGNCC	7 cut(s)	55, 166, 390, 776, 791, 839, 1063
AsuC2I	CCSGG	4 cut(s)	337, 338, 389, 831
AsuHPI	GGTGA	2 cut(s)	643, 1684
AvaI	CYCGRG	3 cut(s)	336, 350, 464
AvaII	GGWCC	4 cut(s)	55, 166, 839, 1063
BaeI	ACNNNNGTAYC	4 cut(s)	1636, 1669, 1785, 1818
BalI	TGGCCA	1 cut(s)	1719
BanII	GRGCYC	2 cut(s)	252, 801
BbsI	GAAGAC	3 cut(s)	33, 1022, 1298
BbvCI	CCTCAGC	2 cut(s)	557, 1812
BbvI	GCAGC	4 cut(s)	438, 472, 492, 1384
BceAI	ACGGC	5 cut(s)	48, 409, 595, 628, 763
BciT130I	CCWGG	2 cut(s)	53, 593
BciVI	GTATCC	1 cut(s)	1637
BcnI	CCSGG	4 cut(s)	337, 338, 389, 831
BcoDI	GTCTC	5 cut(s)	461, 891, 1085, 1251, 1817
BcuI	ACTAGT	1 cut(s)	722
BfaI	CTAG	3 cut(s)	651, 723, 1271
BfoI	RGCGCY	2 cut(s)	506, 557
BfuI	GTATCC	1 cut(s)	1637
BisI	GCNGC	8 cut(s)	19, 452, 461, 506, 583, 818, 1282, 1373
BlsI	GCNGC	8 cut(s)	20, 453, 462, 507, 584, 819, 1283, 1374
Bme1390I	CCNGG	6 cut(s)	53, 337, 338, 389, 593, 831
Bme18I	GGWCC	4 cut(s)	55, 166, 839, 1063
BmeRI	GACNNNNNGTC	1 cut(s)	1575
BmeT110I	CYCGRG	3 cut(s)	336, 350, 464
BmgBI	CACGTC	2 cut(s)	1604, 1622
BmgT120I	GGNCC	7 cut(s)	55, 166, 390, 776, 791, 839, 1063
BmiI	GGNNCC	3 cut(s)	371, 798, 1353
BmrFI	CCNGG	6 cut(s)	53, 337, 338, 389, 593, 831
BmrI	ACTGGG	2 cut(s)	1056, 1716
BmuI	ACTGGG	2 cut(s)	1056, 1716
BpiI	GAAGAC	3 cut(s)	33, 1022, 1298
BpmI	CTGGAG	3 cut(s)	434, 614, 1880
Bpu10I	CCTNAGC	2 cut(s)	557, 1812
BpuEI	CTTGAG	2 cut(s)	146, 1016
BpuMI	CCSGG	4 cut(s)	337, 338, 389, 831
Bsa29I	ATCGAT	1 cut(s)	150
BsaHI	GRCGYC	1 cut(s)	1177
BsaI	GGTCTC	2 cut(s)	461, 891
BsaJI	CCNNGG	5 cut(s)	336, 779, 830, 1490, 1874
BsaWI	WCCGGW	1 cut(s)	645
BsaXI	ACNNNNNCTCC	8 cut(s)	173, 203, 276, 306, 747, 777, 1136, 1166
Bsc4I	CCNNNNNNNGG	6 cut(s)	337, 355, 379, 836, 908, 1858
Bse1I	ACTGG	5 cut(s)	1051, 1603, 1711, 1720, 1727
Bse3DI	GCAATG	4 cut(s)	51, 1001, 1562, 1744
BseBI	CCWGG	2 cut(s)	53, 593
BseCI	ATCGAT	1 cut(s)	150
BseDI	CCNNGG	5 cut(s)	336, 779, 830, 1490, 1874
BseGI	GGATG	4 cut(s)	703, 739, 861, 882
BseLI	CCNNNNNNNGG	6 cut(s)	337, 355, 379, 836, 908, 1858
BseMI	GCAATG	4 cut(s)	51, 1001, 1562, 1744
BseMII	CTCAG	4 cut(s)	548, 998, 1383, 1803
BseNI	ACTGG	5 cut(s)	1051, 1603, 1711, 1720, 1727
BseXI	GCAGC	4 cut(s)	438, 472, 492, 1384
BseYI	CCCAGC	1 cut(s)	90
BsgI	GTGCAG	1 cut(s)	1132
Bsh1236I	CGCG	3 cut(s)	84, 476, 605
BshFI	GGCC	8 cut(s)	35, 392, 482, 778, 793, 901, 1078, 1719
BshVI	ATCGAT	1 cut(s)	150
BsiHKCI	CYCGRG	3 cut(s)	336, 350, 464
BsiSI	CCGG	8 cut(s)	337, 367, 388, 488, 646, 671, 794, 830
BslFI	GGGAC	5 cut(s)	125, 924, 1473, 1508, 1534
BslI	CCNNNNNNNGG	6 cut(s)	337, 355, 379, 836, 908, 1858
BsmAI	GTCTC	5 cut(s)	461, 891, 1085, 1251, 1817
BsmFI	GGGAC	5 cut(s)	125, 924, 1473, 1508, 1534
BsmI	GAATGC	2 cut(s)	870, 954
BsnI	GGCC	8 cut(s)	35, 392, 482, 778, 793, 901, 1078, 1719
Bso31I	GGTCTC	2 cut(s)	461, 891
BsoBI	CYCGRG	3 cut(s)	336, 350, 464
Bsp1286I	GDGCHC	2 cut(s)	252, 801
Bsp1407I	TGTACA	1 cut(s)	1306
Bsp143I	GATC	4 cut(s)	151, 991, 1483, 1768
Bsp19I	CCATGG	1 cut(s)	1490
BspANI	GGCC	8 cut(s)	35, 392, 482, 778, 793, 901, 1078, 1719
BspCNI	CTCAG	4 cut(s)	549, 999, 1384, 1804
BspDI	ATCGAT	1 cut(s)	150
BspFNI	CGCG	3 cut(s)	84, 476, 605
BspLI	GGNNCC	3 cut(s)	371, 798, 1353
BspPI	GGATC	3 cut(s)	999, 1478, 1763
BspTNI	GGTCTC	2 cut(s)	461, 891
BsrBI	CCGCTC	2 cut(s)	189, 810
BsrDI	GCAATG	4 cut(s)	51, 1001, 1562, 1744
BsrGI	TGTACA	1 cut(s)	1306
BsrI	ACTGG	5 cut(s)	1051, 1603, 1711, 1720, 1727
BssECI	CCNNGG	5 cut(s)	336, 779, 830, 1490, 1874
BssMI	GATC	4 cut(s)	151, 991, 1483, 1768
BssNI	GRCGYC	1 cut(s)	1177
BssT1I	CCWWGG	2 cut(s)	1490, 1874
Bst2UI	CCWGG	2 cut(s)	53, 593
Bst4CI	ACNGT	5 cut(s)	631, 1262, 1427, 1464, 1896
Bst6I	CTCTTC	4 cut(s)	178, 962, 969, 975
BstACI	GRCGYC	1 cut(s)	1177
BstAPI	GCANNNNNTGC	1 cut(s)	1928
BstAUI	TGTACA	1 cut(s)	1306
BstC8I	GCNNGC	9 cut(s)	252, 256, 306, 501, 680, 1197, 1377, 1903, 1907
BstDEI	CTNAG	4 cut(s)	557, 1007, 1392, 1812
BstDSI	CCRYGG	2 cut(s)	779, 1490
BstF5I	GGATG	4 cut(s)	703, 739, 861, 882
BstFNI	CGCG	3 cut(s)	84, 476, 605
BstH2I	RGCGCY	2 cut(s)	506, 557
BstHHI	GCGC	7 cut(s)	51, 86, 505, 556, 1224, 1545, 1713
BstKTI	GATC	4 cut(s)	154, 994, 1486, 1771
BstMAI	GTCTC	5 cut(s)	461, 891, 1085, 1251, 1817
BstMBI	GATC	4 cut(s)	151, 991, 1483, 1768
BstMWI	GCNNNNNNNGC	9 cut(s)	41, 247, 398, 430, 457, 460, 505, 735, 1928
BstNI	CCWGG	2 cut(s)	53, 593
BstNSI	RCATGY	3 cut(s)	1299, 1348, 1909
BstSCI	CCNGG	6 cut(s)	51, 335, 336, 387, 591, 829
BstUI	CGCG	3 cut(s)	84, 476, 605
BstV1I	GCAGC	4 cut(s)	438, 472, 492, 1384
BstV2I	GAAGAC	3 cut(s)	33, 1022, 1298
BstX2I	RGATCY	2 cut(s)	991, 1768
BstYI	RGATCY	2 cut(s)	991, 1768
Bsu15I	ATCGAT	1 cut(s)	150
BsuI	GTATCC	1 cut(s)	1637
BsuRI	GGCC	8 cut(s)	35, 392, 482, 778, 793, 901, 1078, 1719
BsuTUI	ATCGAT	1 cut(s)	150
BtgI	CCRYGG	2 cut(s)	779, 1490
BtgZI	GCGATG	1 cut(s)	1622
BtrI	CACGTC	2 cut(s)	1604, 1622
BtsCI	GGATG	4 cut(s)	703, 739, 861, 882
BtsIMutI	CAGTG	3 cut(s)	1596, 1713, 1720
Cac8I	GCNNGC	9 cut(s)	252, 256, 306, 501, 680, 1197, 1377, 1903, 1907
CfoI	GCGC	7 cut(s)	51, 86, 505, 556, 1224, 1545, 1713
Cfr13I	GGNCC	7 cut(s)	55, 166, 390, 776, 791, 839, 1063
Cfr9I	CCCGGG	1 cut(s)	336
ClaI	ATCGAT	1 cut(s)	150
CseI	GACGC	1 cut(s)	482
Csp6I	GTAC	4 cut(s)	76, 601, 1307, 1849
CviQI	GTAC	4 cut(s)	76, 601, 1307, 1849
DdeI	CTNAG	4 cut(s)	557, 1007, 1392, 1812
DpnI	GATC	4 cut(s)	153, 993, 1485, 1770
DpnII	GATC	4 cut(s)	151, 991, 1483, 1768
DriI	GACNNNNNGTC	1 cut(s)	1575
EaeI	YGGCCR	2 cut(s)	33, 1717
Eam1104I	CTCTTC	4 cut(s)	178, 962, 969, 975
Eam1105I	GACNNNNNGTC	1 cut(s)	1575
EarI	CTCTTC	4 cut(s)	178, 962, 969, 975
EciI	GGCGGA	2 cut(s)	584, 1476
Eco130I	CCWWGG	2 cut(s)	1490, 1874
Eco147I	AGGCCT	2 cut(s)	482, 901
Eco24I	GRGCYC	2 cut(s)	252, 801
Eco31I	GGTCTC	2 cut(s)	461, 891
Eco32I	GATATC	1 cut(s)	1432
Eco47I	GGWCC	4 cut(s)	55, 166, 839, 1063
Eco57I	CTGAAG	1 cut(s)	476
Eco88I	CYCGRG	3 cut(s)	336, 350, 464
EcoO109I	RGGNCCY	2 cut(s)	55, 166
EcoRII	CCWGG	2 cut(s)	51, 591
EcoRV	GATATC	1 cut(s)	1432
EcoT14I	CCWWGG	2 cut(s)	1490, 1874
EcoT22I	ATGCAT	1 cut(s)	897
EcoT38I	GRGCYC	2 cut(s)	252, 801
ErhI	CCWWGG	2 cut(s)	1490, 1874
FaqI	GGGAC	5 cut(s)	125, 924, 1473, 1508, 1534
FauI	CCCGC	9 cut(s)	139, 151, 259, 263, 313, 381, 501, 731, 803
FauNDI	CATATG	1 cut(s)	1503
Fnu4HI	GCNGC	8 cut(s)	19, 452, 461, 506, 583, 818, 1282, 1373
FokI	GGATG	4 cut(s)	710, 746, 868, 889
FriOI	GRGCYC	2 cut(s)	252, 801
Fsp4HI	GCNGC	8 cut(s)	19, 452, 461, 506, 583, 818, 1282, 1373
FspAI	RTGCGCAY	1 cut(s)	1544
FspBI	CTAG	3 cut(s)	651, 723, 1271
FspI	TGCGCA	1 cut(s)	1544
GlaI	GCGC	7 cut(s)	50, 85, 504, 555, 1223, 1544, 1712
GluI	GCNGC	8 cut(s)	19, 452, 461, 506, 583, 818, 1282, 1373
GsaI	CCCAGC	1 cut(s)	94
GsuI	CTGGAG	3 cut(s)	434, 614, 1880
HaeII	RGCGCY	2 cut(s)	506, 557
HaeIII	GGCC	8 cut(s)	35, 392, 482, 778, 793, 901, 1078, 1719
HapII	CCGG	8 cut(s)	337, 367, 388, 488, 646, 671, 794, 830
HgaI	GACGC	1 cut(s)	482
HhaI	GCGC	7 cut(s)	51, 86, 505, 556, 1224, 1545, 1713
Hin1I	GRCGYC	1 cut(s)	1177
Hin6I	GCGC	7 cut(s)	49, 84, 503, 554, 1222, 1543, 1711
HinP1I	GCGC	7 cut(s)	49, 84, 503, 554, 1222, 1543, 1711
HincII	GTYRAC	3 cut(s)	610, 1249, 1409
HindII	GTYRAC	3 cut(s)	610, 1249, 1409
HinfI	GANTC	6 cut(s)	341, 440, 535, 686, 1322, 1470
HpaII	CCGG	8 cut(s)	337, 367, 388, 488, 646, 671, 794, 830
HphI	GGTGA	2 cut(s)	643, 1684
Hpy166II	GTNNAC	4 cut(s)	610, 1130, 1249, 1409
Hpy188I	TCNGA	7 cut(s)	121, 448, 720, 843, 1393, 1581, 1820
Hpy188III	TCNNGA	5 cut(s)	413, 466, 995, 1271, 1936
Hpy8I	GTNNAC	4 cut(s)	610, 1130, 1249, 1409
Hpy99I	CGWCG	3 cut(s)	448, 476, 1179
HpyAV	CCTTC	8 cut(s)	187, 202, 309, 472, 655, 982, 1132, 1201
HpyCH4III	ACNGT	5 cut(s)	631, 1262, 1427, 1464, 1896
HpyCH4IV	ACGT	3 cut(s)	1177, 1603, 1621
HpyF10VI	GCNNNNNNNGC	9 cut(s)	41, 247, 398, 430, 457, 460, 505, 735, 1928
HpyF3I	CTNAG	4 cut(s)	557, 1007, 1392, 1812
HpySE526I	ACGT	3 cut(s)	1177, 1603, 1621
Hsp92I	GRCGYC	1 cut(s)	1177
HspAI	GCGC	7 cut(s)	49, 84, 503, 554, 1222, 1543, 1711
Kzo9I	GATC	4 cut(s)	151, 991, 1483, 1768
LmnI	GCTCC	7 cut(s)	194, 448, 796, 1054, 1357, 1612, 1741
Lsp1109I	GCAGC	4 cut(s)	438, 472, 492, 1384
MaeI	CTAG	3 cut(s)	651, 723, 1271
MaeII	ACGT	3 cut(s)	1177, 1603, 1621
MaeIII	GTNAC	2 cut(s)	625, 1594
MalI	GATC	4 cut(s)	153, 993, 1485, 1770
MbiI	CCGCTC	2 cut(s)	189, 810
MboI	GATC	4 cut(s)	151, 991, 1483, 1768
MboII	GAAGA	7 cut(s)	38, 165, 979, 986, 992, 1027, 1303
MfeI	CAATTG	2 cut(s)	1133, 1951
MflI	RGATCY	2 cut(s)	991, 1768
MhlI	GDGCHC	2 cut(s)	252, 801
MlsI	TGGCCA	1 cut(s)	1719
MluCI	AATT	8 cut(s)	709, 1133, 1186, 1227, 1438, 1508, 1698, 1951
MluNI	TGGCCA	1 cut(s)	1719
MlyI	GAGTC	2 cut(s)	449, 1479
MmeI	TCCRAC	3 cut(s)	336, 426, 1735
Mox20I	TGGCCA	1 cut(s)	1719
Mph1103I	ATGCAT	1 cut(s)	897
MscI	TGGCCA	1 cut(s)	1719
MseI	TTAA	3 cut(s)	1367, 1422, 1551
MslI	CAYNNNNRTG	2 cut(s)	1242, 1502
Msp20I	TGGCCA	1 cut(s)	1719
MspI	CCGG	8 cut(s)	337, 367, 388, 488, 646, 671, 794, 830
MspR9I	CCNGG	6 cut(s)	53, 337, 338, 389, 593, 831
MunI	CAATTG	2 cut(s)	1133, 1951
Mva1269I	GAATGC	2 cut(s)	870, 954
MvaI	CCWGG	2 cut(s)	53, 593
MvnI	CGCG	3 cut(s)	84, 476, 605
MwoI	GCNNNNNNNGC	9 cut(s)	41, 247, 398, 430, 457, 460, 505, 735, 1928
NciI	CCSGG	4 cut(s)	337, 338, 389, 831
NcoI	CCATGG	1 cut(s)	1490
NdeI	CATATG	1 cut(s)	1503
NdeII	GATC	4 cut(s)	151, 991, 1483, 1768
NlaIV	GGNNCC	3 cut(s)	371, 798, 1353
NmeAIII	GCCGAG	1 cut(s)	894
NmuCI	GTSAC	1 cut(s)	1594
NsbI	TGCGCA	1 cut(s)	1544
NsiI	ATGCAT	1 cut(s)	897
NspI	RCATGY	3 cut(s)	1299, 1348, 1909
PaeI	GCATGC	1 cut(s)	1909
PaeR7I	CTCGAG	1 cut(s)	464
PceI	AGGCCT	2 cut(s)	482, 901
PciI	ACATGT	1 cut(s)	1344
PctI	GAATGC	2 cut(s)	870, 954
PfeI	GAWTC	4 cut(s)	341, 535, 686, 1322
PfoI	TCCNGGA	1 cut(s)	591
PkrI	GCNGC	8 cut(s)	20, 453, 462, 507, 584, 819, 1283, 1374
PleI	GAGTC	2 cut(s)	448, 1478
PpsI	GAGTC	2 cut(s)	448, 1478
PpuMI	RGGWCCY	2 cut(s)	55, 166
PscI	ACATGT	1 cut(s)	1344
Psp5II	RGGWCCY	2 cut(s)	55, 166
Psp6I	CCWGG	2 cut(s)	51, 591
PspFI	CCCAGC	1 cut(s)	90
PspGI	CCWGG	2 cut(s)	51, 591
PspN4I	GGNNCC	3 cut(s)	371, 798, 1353
PspPI	GGNCC	7 cut(s)	55, 166, 390, 776, 791, 839, 1063
PspPPI	RGGWCCY	2 cut(s)	55, 166
PsuI	RGATCY	2 cut(s)	991, 1768
RsaI	GTAC	4 cut(s)	77, 602, 1308, 1850
RsaNI	GTAC	4 cut(s)	76, 601, 1307, 1849
RseI	CAYNNNNRTG	2 cut(s)	1242, 1502
SaqAI	TTAA	3 cut(s)	1367, 1422, 1551
SatI	GCNGC	8 cut(s)	19, 452, 461, 506, 583, 818, 1282, 1373
Sau3AI	GATC	4 cut(s)	151, 991, 1483, 1768
Sau96I	GGNCC	7 cut(s)	55, 166, 390, 776, 791, 839, 1063
SchI	GAGTC	2 cut(s)	449, 1479
ScrFI	CCNGG	6 cut(s)	53, 337, 338, 389, 593, 831
SduI	GDGCHC	2 cut(s)	252, 801
Sfr274I	CTCGAG	1 cut(s)	464
SinI	GGWCC	4 cut(s)	55, 166, 839, 1063
SlaI	CTCGAG	1 cut(s)	464
SmaI	CCCGGG	1 cut(s)	338
SmiMI	CAYNNNNRTG	2 cut(s)	1242, 1502
SmlI	CTYRAG	3 cut(s)	161, 464, 995
SmoI	CTYRAG	3 cut(s)	161, 464, 995
SpeI	ACTAGT	1 cut(s)	722
SphI	GCATGC	1 cut(s)	1909
Sse9I	AATT	8 cut(s)	709, 1133, 1186, 1227, 1438, 1508, 1698, 1951
SseBI	AGGCCT	2 cut(s)	482, 901
SspI	AATATT	2 cut(s)	1385, 1789
SspMI	CTAG	3 cut(s)	651, 723, 1271
StuI	AGGCCT	2 cut(s)	482, 901
StyD4I	CCNGG	6 cut(s)	51, 335, 336, 387, 591, 829
StyI	CCWWGG	2 cut(s)	1490, 1874
TaaI	ACNGT	5 cut(s)	631, 1262, 1427, 1464, 1896
TaiI	ACGT	3 cut(s)	1180, 1606, 1624
TaqI	TCGA	9 cut(s)	60, 96, 126, 150, 246, 465, 563, 689, 1040
TaqII	GACCGA	1 cut(s)	485
TasI	AATT	8 cut(s)	709, 1133, 1186, 1227, 1438, 1508, 1698, 1951
TatI	WGTACW	1 cut(s)	1306
TauI	GCSGC	4 cut(s)	21, 585, 820, 1284
TfiI	GAWTC	4 cut(s)	341, 535, 686, 1322
Tru1I	TTAA	3 cut(s)	1367, 1422, 1551
Tru9I	TTAA	3 cut(s)	1367, 1422, 1551
TscAI	CASTG	3 cut(s)	1603, 1720, 1727
TseFI	GTSAC	1 cut(s)	1594
TseI	GCWGC	4 cut(s)	451, 460, 505, 1372
Tsp45I	GTSAC	1 cut(s)	1594
TspDTI	ATGAA	8 cut(s)	674, 893, 980, 1001, 1202, 1304, 1490, 1551
TspMI	CCCGGG	1 cut(s)	336
TspRI	CASTG	3 cut(s)	1603, 1720, 1727
VpaK11BI	GGWCC	4 cut(s)	55, 166, 839, 1063
XapI	RAATTY	1 cut(s)	709
XbaI	TCTAGA	1 cut(s)	1270
XceI	RCATGY	3 cut(s)	1299, 1348, 1909
XcmI	CCANNNNNNNNNTGG	1 cut(s)	352
XhoI	CTCGAG	1 cut(s)	464
XmaI	CCCGGG	1 cut(s)	336
XspI	CTAG	3 cut(s)	651, 723, 1271
ZraI	GACGTC	1 cut(s)	1178
Zsp2I	ATGCAT	1 cut(s)	897

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.